Metagenome / Metatranscriptome Family F075134

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075134
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	61 residues
Representative Sequence	MPGLFAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Number of Associated Samples	95
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.54 %
% of genes near scaffold ends (potentially truncated)	96.64 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.017 % of family members)
Environment Ontology (ENVO)	Unclassified (53.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.16% β-sheet: 0.00% Coil/Unstructured: 48.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF08044	DUF1707	95.80
PF00730	HhH-GPD	0.84
PF00196	GerE	0.84
PF04199	Cyclase	0.84
PF01979	Amidohydro_1	0.84
PF01425	Amidase	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.84
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.84
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.84
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.84
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.84
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.84
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.03 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.51 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.67 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	63.87 %
Unclassified	root	N/A	15.97 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	49.58 %
Unclassified	root	N/A	15.97 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.58 %
Unclassified	root	N/A	15.97 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4.20 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.58 %
Unclassified	root	N/A	15.97 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.68 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10214345	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300005332\|Ga0066388_100930255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1443	Open in IMG/M
3300005332\|Ga0066388_100983143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1410	Open in IMG/M
3300005332\|Ga0066388_102603210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300005332\|Ga0066388_104186001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300005337\|Ga0070682_100627877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300005435\|Ga0070714_102046745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300005440\|Ga0070705_100986634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	683	Open in IMG/M
3300005458\|Ga0070681_11218464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	675	Open in IMG/M
3300005764\|Ga0066903_106754445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300005994\|Ga0066789_10379061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	591	Open in IMG/M
3300006028\|Ga0070717_11769637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	559	Open in IMG/M
3300006102\|Ga0075015_100364499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300006176\|Ga0070765_100243867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1646	Open in IMG/M
3300006804\|Ga0079221_10218470	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300006904\|Ga0075424_100422109	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300007265\|Ga0099794_10468011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	662	Open in IMG/M
3300009090\|Ga0099827_10493803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300009098\|Ga0105245_10569365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300010048\|Ga0126373_11667181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300010360\|Ga0126372_10695545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300010360\|Ga0126372_10970047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300010360\|Ga0126372_11146659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300010361\|Ga0126378_11352245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300010366\|Ga0126379_10118506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2398	Open in IMG/M
3300010366\|Ga0126379_10985724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300010376\|Ga0126381_102843931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300010376\|Ga0126381_103616469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300010876\|Ga0126361_10688298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300012198\|Ga0137364_11095554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300012349\|Ga0137387_11019805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012354\|Ga0137366_10846540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012380\|Ga0134047_1023292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300012971\|Ga0126369_11237771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300016319\|Ga0182033_11661994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300016341\|Ga0182035_10069760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2467	Open in IMG/M
3300016341\|Ga0182035_10365980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1202	Open in IMG/M
3300016357\|Ga0182032_11817488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300016404\|Ga0182037_10114467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300016404\|Ga0182037_10373036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300016404\|Ga0182037_11915161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300016445\|Ga0182038_10231823	Not Available	1473	Open in IMG/M
3300017823\|Ga0187818_10238845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300017948\|Ga0187847_10295524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300017973\|Ga0187780_10199893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300018030\|Ga0187869_10343036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300019888\|Ga0193751_1096492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300020002\|Ga0193730_1094173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300020582\|Ga0210395_11147032	Not Available	572	Open in IMG/M
3300021401\|Ga0210393_11494030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300021474\|Ga0210390_11469530	Not Available	540	Open in IMG/M
3300021560\|Ga0126371_10444167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1442	Open in IMG/M
3300021560\|Ga0126371_13684166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300025633\|Ga0208480_1016212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2287	Open in IMG/M
3300025929\|Ga0207664_11632370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300027165\|Ga0208608_106693	Not Available	730	Open in IMG/M
3300027646\|Ga0209466_1134541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300027765\|Ga0209073_10477499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300028881\|Ga0307277_10026180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2303	Open in IMG/M
3300030524\|Ga0311357_10978555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	746	Open in IMG/M
3300031564\|Ga0318573_10306369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300031564\|Ga0318573_10778670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300031573\|Ga0310915_11169285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300031680\|Ga0318574_10400159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300031681\|Ga0318572_10540332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300031681\|Ga0318572_10541635	Not Available	693	Open in IMG/M
3300031719\|Ga0306917_11319592	Not Available	558	Open in IMG/M
3300031724\|Ga0318500_10381711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300031724\|Ga0318500_10474150	Not Available	627	Open in IMG/M
3300031744\|Ga0306918_10628784	Not Available	841	Open in IMG/M
3300031747\|Ga0318502_10114674	Not Available	1508	Open in IMG/M
3300031748\|Ga0318492_10151390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1170	Open in IMG/M
3300031751\|Ga0318494_10852470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300031764\|Ga0318535_10422771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300031769\|Ga0318526_10332871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300031770\|Ga0318521_10098651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1604	Open in IMG/M
3300031771\|Ga0318546_10183454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300031771\|Ga0318546_10214539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1318	Open in IMG/M
3300031771\|Ga0318546_10541615	Not Available	818	Open in IMG/M
3300031777\|Ga0318543_10292444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300031778\|Ga0318498_10055955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1755	Open in IMG/M
3300031779\|Ga0318566_10036084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2297	Open in IMG/M
3300031782\|Ga0318552_10248414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300031792\|Ga0318529_10388848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300031793\|Ga0318548_10022948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2657	Open in IMG/M
3300031797\|Ga0318550_10277364	Not Available	813	Open in IMG/M
3300031799\|Ga0318565_10058083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1808	Open in IMG/M
3300031799\|Ga0318565_10510778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300031821\|Ga0318567_10045285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2254	Open in IMG/M
3300031859\|Ga0318527_10114853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1113	Open in IMG/M
3300031890\|Ga0306925_12231507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	508	Open in IMG/M
3300031893\|Ga0318536_10181495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300031896\|Ga0318551_10474963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300031910\|Ga0306923_11761470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300031912\|Ga0306921_10732089	Not Available	1134	Open in IMG/M
3300031912\|Ga0306921_12573687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300031941\|Ga0310912_10400671	Not Available	1068	Open in IMG/M
3300031941\|Ga0310912_10620749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300031941\|Ga0310912_10937703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300031946\|Ga0310910_10399262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300031946\|Ga0310910_10401658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300031946\|Ga0310910_10721809	Not Available	787	Open in IMG/M
3300031947\|Ga0310909_10152785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1899	Open in IMG/M
3300031954\|Ga0306926_12537445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300032001\|Ga0306922_11534101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300032035\|Ga0310911_10870799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300032043\|Ga0318556_10236660	Not Available	952	Open in IMG/M
3300032043\|Ga0318556_10299930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300032044\|Ga0318558_10235200	Not Available	899	Open in IMG/M
3300032055\|Ga0318575_10561556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300032065\|Ga0318513_10465545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300032067\|Ga0318524_10201455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300032089\|Ga0318525_10217075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300032089\|Ga0318525_10637885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032180\|Ga0307471_101150436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300032261\|Ga0306920_100757866	Not Available	1427	Open in IMG/M
3300033158\|Ga0335077_10783783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	972	Open in IMG/M
3300033290\|Ga0318519_10479726	Not Available	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	1.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.96%
Aquatic	Environmental → Aquatic	3.36%
Plants	Host-Associated → Plants	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.12%
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.68%
Sediment	Environmental → Aquatic → Sediment	0.84%
Peat	Environmental → Terrestrial → Peat	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.15%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102143453	3300004633	Tropical Forest Soil	ADDADEMPGLFAQAAQLAGSIVQMAHVGTPGQIRAAEALLEQTRRQMYQILASGDGSEHDREQK*
Ga0066388_1009302554	3300005332	Tropical Forest Soil	EMARAAWESMAQGEPGEMPGLFVQAARLGGSIVQVARDGTPEQVHAAEALLEQTRRTMYQILAGQADDEPDEL*
Ga0066388_1009831434	3300005332	Tropical Forest Soil	RHIEENPDAARAAWESMAADDADEMPGLFAQAAQLAGSIVQMAHAGTPGQIGAAEALLEQTRREMYQILASGEGSEQDQEQK*
Ga0066388_1026032103	3300005332	Tropical Forest Soil	MPGLFAQAAQLAASIVQMAHAGTPGQIRAAEALLEQTRRQMYQILAGGEGSEQDDEHE*
Ga0066388_1041860012	3300005332	Tropical Forest Soil	DADEMPGLFAQAAQLAGSIVQMAHVGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDQEQK*
Ga0070682_1006278773	3300005337	Corn Rhizosphere	EVPGLFVQAARLGGSIVQLAHAGTPGQVHAAEQLLEETRRKMYQILASDDTAEPDEE*
Ga0070714_1020467451	3300005435	Agricultural Soil	WESMAAGSAEEMPGLFAQAAQLASSIVQMAHSGTPGQIRAAEALLEQTRRQMYQILASGGGSEQDEEQE*
Ga0070705_1009866342	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	QAARLGGSIVQLAHAGTPGQVHAAEQLLEETRRKMYQILASDDTAEPDEE*
Ga0070681_112184642	3300005458	Corn Rhizosphere	APDEPGEVPGLFVQAARLGGSIVQLAHAGTPGQVHAAEQLLEETRRKMYQILASDDTAEPDEE*
Ga0066903_1067544451	3300005764	Tropical Forest Soil	QAAQLAGSIVQMSHAGTPGQISAAEALLEQTRREMYQILASGEGSEQEQEQEQK*
Ga0066789_103790612	3300005994	Soil	QDGPGEMPGLFAQAARLGGSIVQLAHAGTPEQIRAAEQLLEQTRRQMYQILASDEPDDEGDEA*
Ga0070717_117696371	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HPEAARAAWESMTPEQGEVPGLFVQAARLGGAIVQVAREGTPQQVHEAEALLEEARRTMYQILAGQTDGEE*
Ga0075015_1003644991	3300006102	Watersheds	EPGEVPGLFTQAARLGGSIVQMAHAGTPEQIQATEQLLEQTRSKIYQILAGDGRGEQDATVEGETGNG*
Ga0070765_1002438674	3300006176	Soil	GLFAQAARLGGSIVQLAHAGTPDQIRAAEQLLERTRRQMYQILASDEPGDGDDPDDAGDAL*
Ga0079221_102184701	3300006804	Agricultural Soil	AQLAGSIVQMAHAGTPGQIRAAEALLEQTRREMYQILASSEGSEQDQKQK*
Ga0075424_1004221093	3300006904	Populus Rhizosphere	PGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEQTRREMYQILAGGEGNEQDQEQK*
Ga0099794_104680112	3300007265	Vadose Zone Soil	GEVPGLFVAAARLGGSIVQMAHAGTPGQIHAAEQLLEQTRRRMYQILAGDAHDEQNEQ*
Ga0099827_104938031	3300009090	Vadose Zone Soil	ARLGGSIVQLAHAGTPGQIRAAEQLLGQTRSRIYQILASDSGGEQDEQ*
Ga0105245_105693651	3300009098	Miscanthus Rhizosphere	PGEVPGLFVQAARLGGSIVQLAHAGTPGQVHAAEQLLEETRRKMYQILASDDTAEPDEE*
Ga0126373_116671813	3300010048	Tropical Forest Soil	ALFVQAARLGGSIVQVAREGTAEQVHAAEALLEQTRRAMYQILAGQDGAQDEQ*
Ga0126372_106955451	3300010360	Tropical Forest Soil	MPGLFVQAARLGGSIVQVARDGTPDQIHAAEALLEQTRRTMYQILAGQAGEEPDETVEHEG*
Ga0126372_109700471	3300010360	Tropical Forest Soil	GEVPGLFIQAARLGGTIVQMAHAGTPEQVHAAEQLLEQTRRRMYGILAGEADGEQEER*
Ga0126372_111466591	3300010360	Tropical Forest Soil	QMPGLFAQAAQLAASIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGQGSEQDEEQE*
Ga0126378_113522451	3300010361	Tropical Forest Soil	QAAQLAGSIVQMAHAGTPGQIRDAETLLEQTRREMYQILASGEGSEQDQEQK*
Ga0126379_101185066	3300010366	Tropical Forest Soil	FAQAAQLAGSIVQMAHAGSPGQIRAAEALLEQTRRQMYQILASGEGSEQDDEQE*
Ga0126379_109857241	3300010366	Tropical Forest Soil	AQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE*
Ga0126381_1028439313	3300010376	Tropical Forest Soil	LAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDQERE*
Ga0126381_1036164691	3300010376	Tropical Forest Soil	LFVQAARLGGSIVQVARDGSPEQIHAAEALLEQTRRAMYQILAGQDGEQDEQ*
Ga0126361_106882981	3300010876	Boreal Forest Soil	RLGGSIVQMAHAGTPGQVHAAEQLLEQTRRRMYQILAGDAHDELDQHDQHDQQ*
Ga0137364_110955541	3300012198	Vadose Zone Soil	SIVQMAHVGTPGQIRDAEALLEQTRRQMYQILASGEDSEQDREQK*
Ga0137387_110198052	3300012349	Vadose Zone Soil	RHVEENPQLARAAWESMADGEPGEIPGLLAAAARLGGSIVQLAHAGTPGQIRAAEQLLGQTRSGIYQILASDSGGEQDEQ*
Ga0137366_108465402	3300012354	Vadose Zone Soil	MAQDEPGEMPGLFAQAARLGGSIVQLAHAGTPEQIRAAEQLLERTRREMYQILASDDPDEDDEE*
Ga0134047_10232922	3300012380	Grasslands Soil	MAQDEPGQVPGLFVQAARLGGSIVQMAHAGTPDQVHAAEQLLERTRSRMYKILAGDVPGERDEQ*
Ga0126369_112377711	3300012971	Tropical Forest Soil	DDADEMPGLFAQAAQLAGSIVQMAHAGTPGQIGAAEALLEQTRREMYQILANGEGSEQDQEQE*
Ga0182033_116619941	3300016319	Soil	GSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0182035_100697603	3300016341	Soil	ESMAADSAEEMPGLFAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEERE
Ga0182035_103659803	3300016341	Soil	SMATDNADEMPGLFAQATQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0182032_118174881	3300016357	Soil	AHPEAARAAWESMTQDEPGEVPGLFVQAARLGGAIVQIAREGTPQQVHEAESILEETRRTIYQILAGEADGEE
Ga0182037_101144673	3300016404	Soil	QLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0182037_103730361	3300016404	Soil	IEENPEVARAAWESMGGDEPGEVPGLFIQAAQLGGSIVQMAHAGTPEQIQATEQLLEQTRSRIYQILAGDVRDEQDEL
Ga0182037_119151612	3300016404	Soil	QAAQLAGSIVQMAHVGSPGQIHAAEALLEQTRRQMYQILASGEGSEQDHEQE
Ga0182038_102318231	3300016445	Soil	PDAARAAWESMAADDADEMPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0187818_102388452	3300017823	Freshwater Sediment	MPGLFAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0187847_102955241	3300017948	Peatland	EPGEMPGLFAQAARLGGSIVQLAHAGTPEQIREAEQLLERTRRQMYQILASDDPDEGDEE
Ga0187780_101998931	3300017973	Tropical Peatland	RAAWESMGGGEPGEVPGLFIQAAQLGGSIVQMAHAGTPEQIQATEQLLEQTRSKIYQILAGDVRDEQDEL
Ga0187869_103430362	3300018030	Peatland	FAQAARLGGSIVQLAHAGTPEQIREAEQLLERTRRQMYQILASDDPDEGDEE
Ga0193751_10964923	3300019888	Soil	LLAAAARLGGSIVQLAHAGTPGQIRAAEQLLGQTRSRIYQILASDADGEQDEQ
Ga0193730_10941732	3300020002	Soil	ESMADGEPGEIPGLLAAAARLGGSIVQLAHAGTPGQIRAAEQLLGQTRSRIYQILAGDADGEQDEQ
Ga0210395_111470322	3300020582	Soil	SMTQEPGEVPGLFVQAARLGGAIVQMAREGTPEQVHEAEALLEQARRTMYQILAGQQDGEEQEQGMSHG
Ga0210393_114940302	3300021401	Soil	EENPEMARAAWESMAQGEPGEMPGLFVQAARLGGSIVQMARDGTPEQTHAAEALLERTRRTMYQILAGQVDDEPDEQ
Ga0210390_114695301	3300021474	Soil	AWESMTQEPGEVPGLFVQAARLGGAIVQMAREGTPEQVHEAEALLEQARRTMYQILAGQQDGEEQEQGMSHG
Ga0126371_104441671	3300021560	Tropical Forest Soil	MPGLFVQAARLGGTVVQMAHAGTPEQIQAAEQLLEQTRRRIYQILAGDDGGEQDEQDEL
Ga0126371_136841661	3300021560	Tropical Forest Soil	MPGLFVQAARLGGSIVQVARDGTPEQIHAAEALLEQTRRTMYQILAGQDDAEPDEQ
Ga0208480_10162123	3300025633	Arctic Peat Soil	AQDGPGEMPGLFAQAARLGGSIVQLAHAGTPEQIRAAEQLLERTRRQMYQILASDEPDDEGDEA
Ga0207664_116323702	3300025929	Agricultural Soil	RAAWESMAAGSAEEMPGLFAQAAQLASSIVQMAHSGTPGQIRAAEALLEQTRRQMYQILASGGGSEQDEEQE
Ga0208608_1066931	3300027165	Forest Soil	HPDAARAAWEAMTPEPGEVPGLFVQAARLGGAIVQMAREGTPEQTHEAEALLEQARRTMYQILAGHEDGEE
Ga0209466_11345411	3300027646	Tropical Forest Soil	AAWESMAQDEPGPVPGLFVQAARLGGSIVQMAHAGTPEQVHAAEQLLERTRSRMYKILAGDVHGEHDEQ
Ga0209073_104774991	3300027765	Agricultural Soil	DEPGEVPGLFVQAARLGGSIVQLAHAGTPGQAHAAEQLLEETRRKMYQILASDDTAEPDE
Ga0209275_100976694	3300027884	Soil	AQAARLGGSIVQLAHAGTPDQIRAAEQLLERTRRQMYQILASDEPGDGDDPDDAGDAL
Ga0307277_100261804	3300028881	Soil	PEKARAAWESMTQDEPGQVPGLFVQAAQLGGSIVQMAHAGTPDQVHAAEQLLERTRSRMYKILAGDVPGEHDEQ
Ga0311357_109785551	3300030524	Palsa	SMTRGGPSEVPGLFVQAARLGGSIVQMAHAGTPEQIHAAEQLLEQTRRGMYQILAGDEPDDQDEL
Ga0318573_103063693	3300031564	Soil	DNADEMPGLFAQATQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILAGGEGSEQDQEQE
Ga0318573_107786701	3300031564	Soil	DHPEAARAAWESMTQEEPGEVPGLFVQAARLGGAIVQIAREGTPQQIHEAEAILEEARRTMYQILAGEADGEE
Ga0310915_111692851	3300031573	Soil	FAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318574_104001592	3300031680	Soil	AQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEERE
Ga0318572_105403322	3300031681	Soil	MAADSAEQMPGLFAQAAQLAGSIVQMAQAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0318572_105416351	3300031681	Soil	PGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0306917_113195922	3300031719	Soil	IVQMAQAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDDERE
Ga0318500_103817112	3300031724	Soil	ESMTSGEPGEVPGLFVQAARLGGSIVQVARDGTAEQVHAAEALLEQTRRAMYQILAGQADGEQDEQEKRGTTNG
Ga0318500_104741501	3300031724	Soil	LAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0306918_106287841	3300031744	Soil	GSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0318502_101146741	3300031747	Soil	DADEMPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEQTRREMYQILASGEGTEQDQEQK
Ga0318492_101513903	3300031748	Soil	AQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318494_108524701	3300031751	Soil	RHIEENPETARAAWESMATDSAEEMPGLFAQAAQLAGSIVQMAHVGSPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0318535_104227712	3300031764	Soil	AARLGGSIVQVARDGTPDQIHAAEALLEQTRRAMYQILAGQADGEQDEQEKRGTTNG
Ga0318526_103328712	3300031769	Soil	AEEMPGLFAQAAQLAGSIVQMAHVGSPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQ
Ga0318521_100986511	3300031770	Soil	SMATDSAEEMPGLFAQAAQLASSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILGSGEGSEQDEEQE
Ga0318546_101834543	3300031771	Soil	PGLFIQAAQLGGSIVQMAHAGTPEQIQATEQLLEQTRSRIYQILAGDVRDEQDEL
Ga0318546_102145391	3300031771	Soil	PGEVPGLFVQAARLGGSIVQVARDGTAEQVHAAEALLEQTRRAMYQILAGQDGEQDEE
Ga0318546_105416151	3300031771	Soil	VCRRHIEENPDAARAAWESMAADDADEMPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0318543_102924441	3300031777	Soil	AGSIVQMAHVGTPGQIRAAEALLEQTRREMYQILGRGEGSEQDQEQE
Ga0318498_100559551	3300031778	Soil	PDAARAAWESMAADDADEMPGLFAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318566_100360841	3300031779	Soil	AAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318552_102484143	3300031782	Soil	EVPGLFTQAARLGGSIVQVARDGTPEQIHAAEALLEQTRRAMYQILAGQADGERDEQ
Ga0318529_103888481	3300031792	Soil	ASSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILGSGEGSEQDEEQE
Ga0318548_100229484	3300031793	Soil	MATDNADEMPGLFAQAAQLAGSIVQMAHVGTPGQIRAAEALLEQTRREMYQILGRGEGSEQDQEQE
Ga0318550_102773642	3300031797	Soil	ADDADEMPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0318565_100580831	3300031799	Soil	QLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318565_105107781	3300031799	Soil	TDAGRRYIEENPKRARAAWESMTSGEPGEVPGLFVQAARLGGSIVQVAREGTAEQVHAAEALLEQTRRAMYQILAGQDGEQDEQ
Ga0318567_100452854	3300031821	Soil	AWESMAADDADEMPGLFAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0318527_101148531	3300031859	Soil	IVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0306925_122315072	3300031890	Soil	WESMTQEPGEVPGLFVHAARLGGAIVQMAREGTPQQIHEAEALLEQARRTMYQILADEENGEE
Ga0318536_101814951	3300031893	Soil	GLFAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILAGGEGSEQDREQE
Ga0318551_104749632	3300031896	Soil	QAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0306923_117614702	3300031910	Soil	ARAAWESMTSTGPGEVPGLFTQAARLGGSIVQVARDGTPEQIHAAEALLEQTRRAMYQILAGQADGERDEQ
Ga0306921_107320891	3300031912	Soil	EMPGLFAQAAQLAGSIVQMAHAGTPGQILDAETLLEQTRREMYQILASGEGSEQDQEQK
Ga0306921_125736871	3300031912	Soil	AARAAGESMATDDADEMPGLFAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILAGGEGSEQDREQE
Ga0310912_104006711	3300031941	Soil	AAQLAGSIVQMAHAGTPGQIRDAETLLEQTRREMYQILASGEGSEQDQEQK
Ga0310912_106207492	3300031941	Soil	ARAAWESMATDNADEMPGLFAQAAQLAGSIVQMAHVGTPGQIRAAEALLEQTRREMYQILGRGEGSEQDQEQE
Ga0310912_109377032	3300031941	Soil	GEAGEVPGLFVQAARLGGSIVQVARDGTPDQIHAAEALLEQTRRAMYQILAGQADGEQDEQEKRGTTNG
Ga0310910_103992621	3300031946	Soil	GLFIQAAQLGGSIVQMAHAGTPEQIQATEQLLEQTRSRIYQILAGDVRDEQDEL
Ga0310910_104016583	3300031946	Soil	AAQLAGSIVQVAHAGTPEQISAAEALLEQTRRQMYQILAGEGSEQDQQEI
Ga0310910_107218092	3300031946	Soil	FAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0310909_101527851	3300031947	Soil	ADDADEMPGLFAQAAQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILGGGEGSEQDREQE
Ga0306926_125374451	3300031954	Soil	GEVPGLFTQAARLGGSIVQVARDGTPEQIHAAEALLEQTRRAMYQILAGQADGERDEQQKTRDKSNG
Ga0306922_115341011	3300032001	Soil	LFAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILGSGEGSEQDEEQE
Ga0310911_108707992	3300032035	Soil	SMAADSAEEMPGLFAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0318556_102366603	3300032043	Soil	GLLAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0318556_102999303	3300032043	Soil	DNAEEMPGLFAQAAQLAGSIVQVAHAGTPEQISAAEALLEQTRRQMYQILAGEGSEQDQQEI
Ga0318558_102352001	3300032044	Soil	DEVPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK
Ga0318575_105615561	3300032055	Soil	PETARAAWESMVTDSAEETPGLFAQAAQLAGSIVQMAHVGSPGQIRAAEALLEQTRRQMYQILASGEGSEQDEEQE
Ga0318513_104655452	3300032065	Soil	PEMARAAWESMGGDEPGEVPGLFIQAAQLGGSIVQMAHAGTPEQIQATEQLLEQTRSRIYQILAGDVRDEQDEL
Ga0318524_102014551	3300032067	Soil	FAQATQLAGSIVQMAHVGTPGQVRAAEALLEQTRREMYQILAGGEGSEQDQEQE
Ga0318525_102170751	3300032089	Soil	FAQAAQLAGSIVQMAHAGTPGQIRAAEALLEQTRRQMYQILASGEGSEQDEERE
Ga0318525_106378852	3300032089	Soil	YLPGCAGLFAQAAQLAGSIVQMAQAGTSGQIRAAESLLEKTRRQLYQILASEGSDEEQK
Ga0307471_1011504363	3300032180	Hardwood Forest Soil	EAPGLFVQAARLGGSIVQMARDGTPDQVHAAEALLERTRRTMYQILAGQADGEQDEHEKRGTTNG
Ga0306920_1007578661	3300032261	Soil	DEMPGLFAQAAQLAGSIVQMAHAGTPGQIRDAETLLEQTRREMYQILASGEGTEQDQEQK
Ga0335077_107837833	3300033158	Soil	EMPGLFAQAARLGGSIVQMAHAGTPEQIRAAEQLLEQARSRMYQILAGDIGGEPDGQQKTRTGNG
Ga0318519_104797262	3300033290	Soil	QLAGSIVQMAHAGTPGQIRDAETLLEHTRREMYQILASGEGTEQDQEQK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075134

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences