Metagenome Family F075359

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075359
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	43 residues
Representative Sequence	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Number of Associated Samples	73
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.73 %
% of genes near scaffold ends (potentially truncated)	36.13 %
% of genes from short scaffolds (< 2000 bps)	94.96 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.311 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.689 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.622 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF03401	TctC	3.36
PF00589	Phage_integrase	1.68
PF00027	cNMP_binding	1.68
PF14659	Phage_int_SAM_3	0.84
PF00248	Aldo_ket_red	0.84
PF13545	HTH_Crp_2	0.84
PF05532	CsbD	0.84
PF04226	Transgly_assoc	0.84
PF13356	Arm-DNA-bind_3	0.84
PF04392	ABC_sub_bind	0.84
PF01391	Collagen	0.84
PF11154	DUF2934	0.84
PF12802	MarR_2	0.84
PF07369	DUF1488	0.84
PF01527	HTH_Tnp_1	0.84
PF07859	Abhydrolase_3	0.84
PF13683	rve_3	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.36
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.84
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.84
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.84
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
All Organisms	root	All Organisms	22.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
cellular organisms	root	All Organisms → cellular organisms	22.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.24 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.68 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.84 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.84 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.84 %
Azospirillum argentinense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum argentinense	0.84 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.68 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.84 %
Azospirillum argentinense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum argentinense	0.84 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01ALXL1	Not Available	600	Open in IMG/M
3300004633\|Ga0066395_10219336	Not Available	1005	Open in IMG/M
3300004633\|Ga0066395_10615807	Not Available	637	Open in IMG/M
3300005332\|Ga0066388_102179148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	999	Open in IMG/M
3300005332\|Ga0066388_105779657	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_106645283	Not Available	583	Open in IMG/M
3300005434\|Ga0070709_10843152	Not Available	722	Open in IMG/M
3300005437\|Ga0070710_10611314	Not Available	760	Open in IMG/M
3300005471\|Ga0070698_102034486	Not Available	528	Open in IMG/M
3300005536\|Ga0070697_101263233	Not Available	658	Open in IMG/M
3300005764\|Ga0066903_100520161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum argentinense	2025	Open in IMG/M
3300005764\|Ga0066903_102745747	Not Available	955	Open in IMG/M
3300005764\|Ga0066903_103720822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	820	Open in IMG/M
3300005764\|Ga0066903_104755175	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_106140324	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_106775270	Not Available	595	Open in IMG/M
3300005764\|Ga0066903_106808165	Not Available	594	Open in IMG/M
3300006052\|Ga0075029_100641246	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300006057\|Ga0075026_100155360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1177	Open in IMG/M
3300006163\|Ga0070715_10905464	Not Available	543	Open in IMG/M
3300006174\|Ga0075014_100311649	Not Available	833	Open in IMG/M
3300006175\|Ga0070712_100978841	Not Available	731	Open in IMG/M
3300006755\|Ga0079222_10759789	Not Available	782	Open in IMG/M
3300006806\|Ga0079220_10944604	Not Available	676	Open in IMG/M
3300006854\|Ga0075425_102974168	Not Available	519	Open in IMG/M
3300010048\|Ga0126373_10571478	Not Available	1180	Open in IMG/M
3300010048\|Ga0126373_10576404	Not Available	1175	Open in IMG/M
3300010048\|Ga0126373_11410686	Not Available	762	Open in IMG/M
3300010048\|Ga0126373_11877113	Not Available	662	Open in IMG/M
3300010358\|Ga0126370_11554690	Not Available	631	Open in IMG/M
3300010361\|Ga0126378_10727104	Not Available	1104	Open in IMG/M
3300010361\|Ga0126378_12228427	Not Available	625	Open in IMG/M
3300010376\|Ga0126381_100651251	Not Available	1503	Open in IMG/M
3300010376\|Ga0126381_101366566	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300012202\|Ga0137363_11631529	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300012211\|Ga0137377_11069814	Not Available	737	Open in IMG/M
3300012948\|Ga0126375_10706334	Not Available	786	Open in IMG/M
3300016270\|Ga0182036_10709602	Not Available	814	Open in IMG/M
3300016270\|Ga0182036_11085107	Not Available	662	Open in IMG/M
3300016294\|Ga0182041_12263636	Not Available	508	Open in IMG/M
3300016319\|Ga0182033_10630674	Not Available	933	Open in IMG/M
3300016319\|Ga0182033_11082272	Not Available	715	Open in IMG/M
3300016319\|Ga0182033_11420797	Not Available	625	Open in IMG/M
3300016357\|Ga0182032_10550264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	955	Open in IMG/M
3300016387\|Ga0182040_10067210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2307	Open in IMG/M
3300016387\|Ga0182040_10222031	Not Available	1403	Open in IMG/M
3300016387\|Ga0182040_11355624	Not Available	601	Open in IMG/M
3300016387\|Ga0182040_11667943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300018058\|Ga0187766_11143281	Not Available	561	Open in IMG/M
3300020581\|Ga0210399_10622260	Not Available	892	Open in IMG/M
3300020581\|Ga0210399_11054176	Not Available	652	Open in IMG/M
3300021560\|Ga0126371_10095801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2945	Open in IMG/M
3300021560\|Ga0126371_10196608	Not Available	2109	Open in IMG/M
3300021560\|Ga0126371_10239125	Not Available	1926	Open in IMG/M
3300021560\|Ga0126371_10501595	Not Available	1362	Open in IMG/M
3300021560\|Ga0126371_10564817	Not Available	1286	Open in IMG/M
3300025906\|Ga0207699_11283164	Not Available	542	Open in IMG/M
3300025916\|Ga0207663_11360583	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300026910\|Ga0207840_1021115	Not Available	647	Open in IMG/M
3300026990\|Ga0207824_1003936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1749	Open in IMG/M
3300027070\|Ga0208365_1025695	Not Available	767	Open in IMG/M
3300027071\|Ga0209214_1017846	Not Available	897	Open in IMG/M
3300027874\|Ga0209465_10125839	Not Available	1265	Open in IMG/M
3300027911\|Ga0209698_10302593	Not Available	1265	Open in IMG/M
3300027915\|Ga0209069_10842696	Not Available	551	Open in IMG/M
3300031231\|Ga0170824_125616646	Not Available	1368	Open in IMG/M
3300031474\|Ga0170818_101268598	Not Available	1025	Open in IMG/M
3300031543\|Ga0318516_10075958	Not Available	1869	Open in IMG/M
3300031545\|Ga0318541_10088493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1648	Open in IMG/M
3300031545\|Ga0318541_10335685	Not Available	844	Open in IMG/M
3300031545\|Ga0318541_10603573	Not Available	614	Open in IMG/M
3300031564\|Ga0318573_10155804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1199	Open in IMG/M
3300031572\|Ga0318515_10393266	Not Available	742	Open in IMG/M
3300031572\|Ga0318515_10632630	Not Available	568	Open in IMG/M
3300031572\|Ga0318515_10767863	Not Available	509	Open in IMG/M
3300031573\|Ga0310915_10123432	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300031679\|Ga0318561_10160337	Not Available	1210	Open in IMG/M
3300031718\|Ga0307474_10386352	Not Available	1088	Open in IMG/M
3300031723\|Ga0318493_10830721	Not Available	521	Open in IMG/M
3300031724\|Ga0318500_10073875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1503	Open in IMG/M
3300031744\|Ga0306918_10121381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1894	Open in IMG/M
3300031744\|Ga0306918_11204234	Not Available	585	Open in IMG/M
3300031754\|Ga0307475_10347939	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300031754\|Ga0307475_10460144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300031754\|Ga0307475_10821765	Not Available	737	Open in IMG/M
3300031754\|Ga0307475_11033572	Not Available	645	Open in IMG/M
3300031764\|Ga0318535_10311603	Not Available	704	Open in IMG/M
3300031770\|Ga0318521_11007222	Not Available	511	Open in IMG/M
3300031771\|Ga0318546_10992736	Not Available	591	Open in IMG/M
3300031820\|Ga0307473_11311231	Not Available	542	Open in IMG/M
3300031823\|Ga0307478_10536182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	977	Open in IMG/M
3300031823\|Ga0307478_10842242	Not Available	768	Open in IMG/M
3300031879\|Ga0306919_11327651	Not Available	544	Open in IMG/M
3300031890\|Ga0306925_10703667	Not Available	1057	Open in IMG/M
3300031890\|Ga0306925_11492245	Not Available	662	Open in IMG/M
3300031890\|Ga0306925_11730236	Not Available	602	Open in IMG/M
3300031910\|Ga0306923_12241700	Not Available	546	Open in IMG/M
3300031910\|Ga0306923_12449568	Not Available	516	Open in IMG/M
3300031912\|Ga0306921_12146870	Not Available	590	Open in IMG/M
3300031912\|Ga0306921_12557376	Not Available	528	Open in IMG/M
3300031942\|Ga0310916_11146032	Not Available	644	Open in IMG/M
3300031942\|Ga0310916_11460713	Not Available	558	Open in IMG/M
3300031947\|Ga0310909_10981068	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031954\|Ga0306926_10242881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2232	Open in IMG/M
3300031954\|Ga0306926_10377934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1750	Open in IMG/M
3300031954\|Ga0306926_11872954	Not Available	678	Open in IMG/M
3300031959\|Ga0318530_10479502	Not Available	516	Open in IMG/M
3300031962\|Ga0307479_11929681	Not Available	540	Open in IMG/M
3300032059\|Ga0318533_10224178	Not Available	1352	Open in IMG/M
3300032059\|Ga0318533_11167815	Not Available	563	Open in IMG/M
3300032066\|Ga0318514_10073336	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300032067\|Ga0318524_10382740	Not Available	733	Open in IMG/M
3300032180\|Ga0307471_101991718	Not Available	728	Open in IMG/M
3300032180\|Ga0307471_102417932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300032180\|Ga0307471_103221756	Not Available	578	Open in IMG/M
3300032261\|Ga0306920_100502930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1798	Open in IMG/M
3300032261\|Ga0306920_103967900	Not Available	538	Open in IMG/M
3300032261\|Ga0306920_104420942	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	0.84%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Aquatic	Environmental → Aquatic	4.20%
Plants	Host-Associated → Plants	0.84%
Solid Waste	Engineered → Solid Waste	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.12%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.84%
Grass	Engineered → Solid Waste → Grass	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.27%
Loam	Environmental → Terrestrial → Soil → Loam	21.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%
Composting	Engineered → Solid Waste → Grass → Composting	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_04222810	2170459014	Switchgrass, Maize And Mischanthus Litter	MGRDPDEERFARQDGERYSGWSSALTIIAILAILAIVFLVYQLKYSIS
Ga0066395_102193362	3300004633	Tropical Forest Soil	MSRDPEEERFARGDNQRYSGWSSAITIVVIVIILSVLLFYYLK*
Ga0066395_106158072	3300004633	Tropical Forest Soil	MSRDPEEERFARADSQRYSGWSSAITIAVIVIVLGIVFLVYYLK*
Ga0066388_1021791483	3300005332	Tropical Forest Soil	GKFMSRDPEEERFARGDNQRYSGWSSATTIVVIVIILSVVLFYYLK*
Ga0066388_1057796571	3300005332	Tropical Forest Soil	MTPEENSNEERFARQDSRRYSGWSNAITIAVIVIILCMVILVYQLKH*
Ga0066388_1066452832	3300005332	Tropical Forest Soil	MSRDPEEERFARQDRERYSGWTSAFTIIAILAILAIAFVVYKLKY*
Ga0070709_108431521	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARQDSGRYSGWASAFTIAVIVIVLCIVFLAYYLK*
Ga0070710_106113142	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARGNSRRYSGWSSAFVIVAILVVLAIVILVYQLK*
Ga0070698_1020344861	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARQNSSGYSGWASAFTIAVIVIVLCIVFLVYYLK*
Ga0070697_1012632331	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DPEEERFARQNRSGYSGWASAFTIAVIVIVLCIVFLVYYLK*
Ga0066903_1005201614	3300005764	Tropical Forest Soil	MSRDPEEERFARQDRERYSGWTSAFTIVAILAILAIALVIYQLKY*
Ga0066903_1027457474	3300005764	Tropical Forest Soil	MSRDPEEERFARGDNQRYSGWSSATTIVVIVIILSVVLFYYLK*
Ga0066903_1037208223	3300005764	Tropical Forest Soil	MSRDPEERFARQDRERYSGWSSAFTVIAIVAILAIVFVAYHLKY*
Ga0066903_1047551752	3300005764	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK*
Ga0066903_1061403242	3300005764	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLIYYLK*
Ga0066903_1067752702	3300005764	Tropical Forest Soil	MSRDPEEERFARGDSRRYSGWSSAITIAVIVIVLGIVFLVYYLK*
Ga0066903_1068081651	3300005764	Tropical Forest Soil	MGHDSEEERFARQDNRRYSGWASAFTIAVIVIVLGIVFLVYQLKY*
Ga0075029_1006412461	3300006052	Watersheds	MSRDPEEERFARQDSGRYSGWASAFTIAVIVIVLCIVFLVYYLK*
Ga0075026_1001553601	3300006057	Watersheds	MSRDPEEERFARQNSGRYSGWASAFTIAVIVIVLCIV
Ga0070715_109054642	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARQDSHRYSGWSSAFAIAAIVIVLMIVFLVYYLK*
Ga0075014_1003116493	3300006174	Watersheds	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVFLVYYLK*
Ga0070712_1009788411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARQNSTGYSGWASAFTIAVIVIVLCIVFLVYYLK*
Ga0079222_107597892	3300006755	Agricultural Soil	LGPKVMSRDPEEERFAREDNRPYSGWSSAFVIVAILVVLAIVILVYQLK*
Ga0079220_109446042	3300006806	Agricultural Soil	MSRDPEEERFARADSQRYSGGSSAITIAVIVIVLGIVFLVYYLK*
Ga0075425_1029741681	3300006854	Populus Rhizosphere	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIALCIVFLVYYLK*
Ga0126373_105714782	3300010048	Tropical Forest Soil	MSRDPEEERFARADSQRYSGWSSAITIAVIVIVLGIVLLVYYLK*
Ga0126373_105764042	3300010048	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVILIVLGIVFLVYYLK*
Ga0126373_114106862	3300010048	Tropical Forest Soil	MSRDPEEERFARGNSQRYSSWSSAITIAVIVIVLGIVFLVYYLK*
Ga0126373_118771132	3300010048	Tropical Forest Soil	MSRDPEEERFARGDNQRYSGWSSATTIVVIVIILSVLLFYYLK*
Ga0126370_115546901	3300010358	Tropical Forest Soil	MNRDPEEERFARGDSQRYSGWSSAITTAVIVIVLGIVFLVYYLK*
Ga0126378_107271042	3300010361	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVLLVYYLK*
Ga0126378_122284271	3300010361	Tropical Forest Soil	MNRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK*
Ga0126381_1006512513	3300010376	Tropical Forest Soil	ARADSQRYSGWSSAITIAVIVIVLGIVFLVYYLK*
Ga0126381_1013665661	3300010376	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVILIVLAIVFLVYYLK*
Ga0137363_116315293	3300012202	Vadose Zone Soil	PNEARFARQDQRRYSGWSSAIAIIAILIVLAIVFLVYQLKH*
Ga0137377_110698143	3300012211	Vadose Zone Soil	MSRDPKEERFARQDSHRYSGWSSVFAIAVIVIVLMIVFFVYYL
Ga0126375_107063342	3300012948	Tropical Forest Soil	MNRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIIFLVFY*
Ga0182036_107096022	3300016270	Soil	MSRDPEEERFARGDSQRYSGRSSAITIAVIVIVLGIVFLVYYLK
Ga0182036_110851072	3300016270	Soil	LMSRDPPEERFAREDSRRYSGRSSAFVIVVIVIVLGIFLVYYLK
Ga0182041_122636362	3300016294	Soil	VSRDPEEERFARGDSQRYSGWSSAITIAVIVLVLGIVFLIYYLK
Ga0182033_106306741	3300016319	Soil	MSRDPEEERFARGDSQRYSRWSSAITIAVIVIVLGIVFLVYYLK
Ga0182033_110822722	3300016319	Soil	MSRDPEERFARQDRERYSGWSSAFTIIAIVAILAIVFVVYHLKY
Ga0182033_114207972	3300016319	Soil	VSRDPEEERFARGDSQRYSGWSSAITIAVIVIILGIVFLIYYLK
Ga0182032_105502641	3300016357	Soil	MCRDPEEERFARGNSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0182040_100672103	3300016387	Soil	MSRDPPEERLAREDSRRYSGRSSAFVIVVIVIVLGIFLVYYLK
Ga0182040_102220314	3300016387	Soil	MSRDPEEERFARGNSQRYSGRSSAITIAVIVIVLGIVFLVYYLK
Ga0182040_113556243	3300016387	Soil	MGRDREEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0182040_116679431	3300016387	Soil	PSEEQFGRQDSRRYSGWTTAITIAVIVIVLGMVILVYQLRY
Ga0187766_111432811	3300018058	Tropical Peatland	EEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0210399_106222603	3300020581	Soil	FMSRDPEEERFARQNSSGYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0210399_110541761	3300020581	Soil	MSRDPEEERLARGDNRRYSGWSSAFVIVAILVVLAIVILVNQLK
Ga0126371_100958015	3300021560	Tropical Forest Soil	MSRDPEEERFARADSQRYSGWSSAITIAVIVIVLGIVFLV
Ga0126371_101966083	3300021560	Tropical Forest Soil	MSRDPEEERFARGNSQRYSSWSSAITIAVIVIVLGIVFLVYYLK
Ga0126371_102391254	3300021560	Tropical Forest Soil	MSRDPEEERFARGDNQRYSGWSSAITIVVIVIILSVLLFYYLK
Ga0126371_105015953	3300021560	Tropical Forest Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVMALGIVLLVYYLK
Ga0126371_105648173	3300021560	Tropical Forest Soil	MSRDPEEERFARQDRERYSGWTSAFTIIAILAILAIAFVVYKLKY
Ga0207699_112831641	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDREEDHYARQDVRGYSGWSSAITIAVIVIVLGIVV
Ga0207663_113605831	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSRDPEEERFARQNSSGYSGWASAFTIAVIVIVLCIVFLVY
Ga0207840_10211151	3300026910	Tropical Forest Soil	MSRDPEEERFARGDRQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0207824_10039361	3300026990	Tropical Forest Soil	MSRDPEEERFARADSQRYSGWSSAITIAAFVIVLGIVFLVYHLRY
Ga0208365_10256951	3300027070	Forest Soil	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVFLVYYL
Ga0209214_10178463	3300027071	Forest Soil	DPEEERFAREDNRPYSGWSSAFVIVAILVVLAIVILVYQLK
Ga0209465_101258392	3300027874	Tropical Forest Soil	MSRDPEEERFARADSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0209698_103025931	3300027911	Watersheds	MSGDPEEERFARQNSRQYSGWASAFTIAVIVIVLCIVFLVYY
Ga0209069_108426962	3300027915	Watersheds	MSRDPEEERFARREDGRYSAWSSAIAIVVIVIVLGIVFLVYYLK
Ga0170824_1256166463	3300031231	Forest Soil	MSRDPEEERFARREDGRYSAWSFAIAIVVIVIVLGIVFLVYYLK
Ga0170818_1012685981	3300031474	Forest Soil	MSRDPEEERFARQDSGRYSGWASAFTIAVIVIVLCIVFLAY
Ga0318516_100759585	3300031543	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0318541_100884931	3300031545	Soil	MSRDPEEERFARGNSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0318541_103356851	3300031545	Soil	MSRDPEERFARQDRERYSGWSSAFTIIAIVAILAIVF
Ga0318541_106035732	3300031545	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVILIVLGIVFLVYYLK
Ga0318573_101558043	3300031564	Soil	RFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0318515_103932662	3300031572	Soil	DPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0318515_106326301	3300031572	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLDYYLK
Ga0318515_107678632	3300031572	Soil	MSRDPEEERFARGNSQRYSGWSSAITIAVIVIVLGIVCLVYYLK
Ga0310915_101234322	3300031573	Soil	MSRDPEERFARQDRERYSGWSSAFTIIAIVAILAIVFVAYHLKY
Ga0318561_101603371	3300031679	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVFGIVFLVYYLK
Ga0307474_103863523	3300031718	Hardwood Forest Soil	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0318493_108307211	3300031723	Soil	MSRDPEERFARQDRERYSGWSSAFTIIAIVAILAIVFVAYHLK
Ga0318500_100738751	3300031724	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYFLK
Ga0306918_101213811	3300031744	Soil	MSDDPEEERFARQDSGRYSGWSSAFTIAVIVIVLSIVFLVYYLK
Ga0306918_112042341	3300031744	Soil	VSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLIYYLK
Ga0307475_103479391	3300031754	Hardwood Forest Soil	TTFMSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0307475_104601441	3300031754	Hardwood Forest Soil	MSRDPEEERFARQNSSGYSGWAFAFTIAVIVIVLCIVFLVYYLK
Ga0307475_108217651	3300031754	Hardwood Forest Soil	MSRDPEEERFAREDSRRYSGWSSAITIVAILVVLAIVFLVYQ
Ga0307475_110335722	3300031754	Hardwood Forest Soil	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVF
Ga0318535_103116032	3300031764	Soil	MSRDPEEERFARGDRQRYSGWSSAITIAVIVIVLGIVFLV
Ga0318521_110072222	3300031770	Soil	MSREPEEERFARQDSRRYSGWTSAVVIAVTVIVLGIVVVYYAK
Ga0318546_109927361	3300031771	Soil	VSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLIYYPK
Ga0307473_113112312	3300031820	Hardwood Forest Soil	LMSRDPEEERFARQDSHRYSGWSSAFAIAAIVIVLMIVFLVYYLK
Ga0307478_105361821	3300031823	Hardwood Forest Soil	MSRDPEEERFARGNGRRYGGWSSAFVIVAILVVLAIVILVYQLKH
Ga0307478_108422421	3300031823	Hardwood Forest Soil	MSRDPEEERFARQNSRGYSGWASAFTIAVIVIVLCIVFLV
Ga0306919_113276511	3300031879	Soil	GPDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0306925_107036672	3300031890	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLSVFLVYYLK
Ga0306925_114922453	3300031890	Soil	MSRDPEEERFARGDSQRYSGRSSAITIAVIVIVLGIVFLIYYPK
Ga0306925_117302362	3300031890	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLVVFLVYYIK
Ga0306923_122417001	3300031910	Soil	MSRDPPEERFAREDSRRYSGQSPAFVIVVNVIVLGIFLVYYLK
Ga0306923_124495683	3300031910	Soil	RVSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLIYYLK
Ga0306921_121468701	3300031912	Soil	MSPEDSNEERLARQDSRRYSGWTSAITIAVIVIVLVI
Ga0306921_125573762	3300031912	Soil	VSRDPEEERFARGDSQRYSGWSSAITIAVIVIVVGIVFLIYYLK
Ga0310912_107159101	3300031941	Soil	MNPDPKDSSEDQYGRQDSRPYSGWSSAITIAVIVIVLGIVVLV
Ga0310916_111460322	3300031942	Soil	MSRDPPEERFAREDSRRYSGQSPAFVIVVIVIVLGI
Ga0310916_114607132	3300031942	Soil	MSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVY
Ga0310909_109810682	3300031947	Soil	LENLMSDDPEEERFARQDSGRYSGWSSAFTIAVIVIVLSIVFLVYYLK
Ga0306926_102428814	3300031954	Soil	MSRDPPEERFAREDSRRHSGRSSAFVIVVIVIVLGIFLDYLK
Ga0306926_103779344	3300031954	Soil	MSDDPEEERFARQDSGRYSGWSSAFTIAVIVIVLSIVFL
Ga0306926_118729542	3300031954	Soil	MSRDPEEERFARGDSQRYSGWCSAITIAVIVIVLGIVFLVYYLK
Ga0318530_104795022	3300031959	Soil	LMSRDPPEERFAREDSRRHSGRSSAFVIVVIVIVLGIFLDYLK
Ga0307479_119296811	3300031962	Hardwood Forest Soil	MSRDPEEERFARQNSRRYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0318533_102241781	3300032059	Soil	MSRDPEEERFARGNSQRYSGWSSAITIAVIVIVLG
Ga0318533_111678151	3300032059	Soil	FARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0318514_100733361	3300032066	Soil	EEDSYEKRFARQDSRRYSGWSNAIAIIAILIVLAMVFLVYQLK
Ga0318524_103827401	3300032067	Soil	MSRDPEEERFARGDSQRYSGWSSAITTAVIVIVLGIVFLVYYLK
Ga0307471_1019917181	3300032180	Hardwood Forest Soil	FLIGLVSIPIPHKAYRERNTTFMSRDPEEERFARQNSRRYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0307471_1024179322	3300032180	Hardwood Forest Soil	ERCARQNSRRYSGWASAFTIAVIVIVLCIVFLVYYLK
Ga0307471_1032217562	3300032180	Hardwood Forest Soil	RKAYREQTRFMSRDPEEERFARQNSSGYSGWAFAFTIAVIVIVLCIVFLVYYLK
Ga0306920_1005029303	3300032261	Soil	MSRDPPEERFAREDSRRYSGQSPAFVIVVIVIVLGIFLVYYLK
Ga0306920_1039679002	3300032261	Soil	ENLMSRDPEEERFARGDSQRYSGWSSAITIAVIVIVLGIVFLVYYLK
Ga0306920_1044209422	3300032261	Soil	GRQDDRPYSGWDSAITIAVIVIVLSIVVLVYQLKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075359

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences