Metagenome Family F075416

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075416
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	46 residues
Representative Sequence	MTNAKAKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGKDTKPSA
Number of Associated Samples	91
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.13 %
% of genes near scaffold ends (potentially truncated)	96.64 %
% of genes from short scaffolds (< 2000 bps)	70.59 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (44.538 % of family members)
Environment Ontology (ENVO)	Unclassified (53.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.303 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.07% β-sheet: 0.00% Coil/Unstructured: 84.93%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01695	IstB_IS21	81.51
PF00665	rve	10.08
PF00589	Phage_integrase	1.68
PF09234	DUF1963	1.68
PF13676	TIR_2	0.84
PF00394	Cu-oxidase	0.84
PF00871	Acetate_kinase	0.84
PF05199	GMC_oxred_C	0.84
PF14559	TPR_19	0.84
PF03050	DDE_Tnp_IS66	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	81.51
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	10.08
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	10.08
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	10.08
COG4584	Transposase	Mobilome: prophages, transposons [X]	10.08
COG3878	Uncharacterized conserved protein YwqG, DUF1963 family	Function unknown [S]	1.68
COG0282	Acetate kinase	Energy production and conversion [C]	0.84
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.84
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.84
COG3426	Butyrate kinase	Energy production and conversion [C]	0.84
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	10.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	10.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.92 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.68 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	10.92 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.68 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	10.92 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.68 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001527\|A3513AW1_1169820	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300001593\|JGI12635J15846_10315819	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300001593\|JGI12635J15846_10772463	Not Available	551	Open in IMG/M
3300001664\|P5cmW16_1062552	Not Available	625	Open in IMG/M
3300009500\|Ga0116229_10162718	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300009645\|Ga0116106_1151437	Not Available	742	Open in IMG/M
3300014155\|Ga0181524_10520211	Not Available	503	Open in IMG/M
3300014161\|Ga0181529_10095380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1913	Open in IMG/M
3300014492\|Ga0182013_10109202	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300014492\|Ga0182013_10176893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1312	Open in IMG/M
3300014495\|Ga0182015_10213970	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300014498\|Ga0182019_10530843	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300018024\|Ga0187881_10450291	Not Available	526	Open in IMG/M
3300018033\|Ga0187867_10354518	Not Available	816	Open in IMG/M
3300018040\|Ga0187862_10074982	All Organisms → cellular organisms → Bacteria → Proteobacteria	2395	Open in IMG/M
3300019886\|Ga0193727_1029991	All Organisms → cellular organisms → Bacteria	1871	Open in IMG/M
3300021405\|Ga0210387_10505776	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300021433\|Ga0210391_10055028	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300022861\|Ga0224528_1024753	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300022875\|Ga0224553_1060862	Not Available	803	Open in IMG/M
3300023088\|Ga0224555_1030678	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300023088\|Ga0224555_1047071	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300023247\|Ga0224529_1007155	All Organisms → cellular organisms → Bacteria	3303	Open in IMG/M
3300025498\|Ga0208819_1012515	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300025574\|Ga0208717_1029228	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300025612\|Ga0208691_1063934	Not Available	831	Open in IMG/M
3300026502\|Ga0255350_1019528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1866	Open in IMG/M
3300026872\|Ga0207785_1027093	Not Available	500	Open in IMG/M
3300027164\|Ga0208994_1012454	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300027516\|Ga0207761_1058931	Not Available	746	Open in IMG/M
3300028562\|Ga0302151_10123716	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300028566\|Ga0302147_10051679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1448	Open in IMG/M
3300028566\|Ga0302147_10190737	Not Available	690	Open in IMG/M
3300028574\|Ga0302153_10054544	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300028652\|Ga0302166_10145955	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300028678\|Ga0302165_10013358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2303	Open in IMG/M
3300028736\|Ga0302214_1031348	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300028748\|Ga0302156_10353636	Not Available	648	Open in IMG/M
3300028762\|Ga0302202_10086530	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300028781\|Ga0302223_10227995	Not Available	615	Open in IMG/M
3300028783\|Ga0302279_10072381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1942	Open in IMG/M
3300028785\|Ga0302201_10041976	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300028785\|Ga0302201_10065680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1733	Open in IMG/M
3300028785\|Ga0302201_10287037	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300028788\|Ga0302189_10404163	Not Available	535	Open in IMG/M
3300028798\|Ga0302222_10063939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1482	Open in IMG/M
3300028806\|Ga0302221_10149689	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300028808\|Ga0302228_10190269	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300028854\|Ga0302268_1031201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1404	Open in IMG/M
3300028859\|Ga0302265_1027696	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300028866\|Ga0302278_10050139	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300028867\|Ga0302146_10295889	Not Available	626	Open in IMG/M
3300028873\|Ga0302197_10031031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3290	Open in IMG/M
3300028873\|Ga0302197_10144528	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300028873\|Ga0302197_10264091	Not Available	784	Open in IMG/M
3300028874\|Ga0302155_10019758	All Organisms → cellular organisms → Bacteria	3351	Open in IMG/M
3300029882\|Ga0311368_10544396	Not Available	827	Open in IMG/M
3300029883\|Ga0311327_10066160	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300029883\|Ga0311327_10520549	Not Available	726	Open in IMG/M
3300029908\|Ga0311341_10157815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1452	Open in IMG/M
3300029910\|Ga0311369_10111754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2722	Open in IMG/M
3300029913\|Ga0311362_10162513	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300029913\|Ga0311362_10189170	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300029915\|Ga0311358_10102879	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300029917\|Ga0311326_10106246	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300029922\|Ga0311363_11186450	Not Available	646	Open in IMG/M
3300029945\|Ga0311330_10869098	Not Available	677	Open in IMG/M
3300029951\|Ga0311371_11049321	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300029951\|Ga0311371_11473318	Not Available	760	Open in IMG/M
3300029952\|Ga0311346_10159554	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300029954\|Ga0311331_10681994	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300029954\|Ga0311331_11206670	Not Available	638	Open in IMG/M
3300029955\|Ga0311342_10071145	All Organisms → cellular organisms → Bacteria → Acidobacteria	3853	Open in IMG/M
3300029955\|Ga0311342_10568757	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300029982\|Ga0302277_1031600	All Organisms → cellular organisms → Bacteria	2766	Open in IMG/M
3300029985\|Ga0302280_1098458	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300029985\|Ga0302280_1270897	Not Available	571	Open in IMG/M
3300029986\|Ga0302188_10267752	Not Available	710	Open in IMG/M
3300029992\|Ga0302276_10015886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5532	Open in IMG/M
3300029992\|Ga0302276_10046257	All Organisms → cellular organisms → Bacteria → Acidobacteria	2675	Open in IMG/M
3300029993\|Ga0302304_10036472	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300030011\|Ga0302270_10477953	Not Available	653	Open in IMG/M
3300030042\|Ga0302300_1028944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1950	Open in IMG/M
3300030044\|Ga0302281_10018399	All Organisms → cellular organisms → Bacteria	4084	Open in IMG/M
3300030044\|Ga0302281_10049452	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300030046\|Ga0302305_1251956	Not Available	622	Open in IMG/M
3300030051\|Ga0302195_10045099	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300030051\|Ga0302195_10202235	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300030054\|Ga0302182_10303659	Not Available	673	Open in IMG/M
3300030225\|Ga0302196_10426815	Not Available	565	Open in IMG/M
3300030507\|Ga0302192_10293306	Not Available	679	Open in IMG/M
3300030509\|Ga0302183_10064173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1453	Open in IMG/M
3300030518\|Ga0302275_10430516	Not Available	680	Open in IMG/M
3300030520\|Ga0311372_10789761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1301	Open in IMG/M
3300030617\|Ga0311356_11100879	Not Available	736	Open in IMG/M
3300030618\|Ga0311354_10321233	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300030618\|Ga0311354_10364312	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300030618\|Ga0311354_10396738	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300030688\|Ga0311345_10681846	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300031232\|Ga0302323_100008612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8494	Open in IMG/M
3300031236\|Ga0302324_100068133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6238	Open in IMG/M
3300031258\|Ga0302318_10020763	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300031258\|Ga0302318_10578610	Not Available	568	Open in IMG/M
3300031259\|Ga0302187_10001745	All Organisms → cellular organisms → Bacteria	18270	Open in IMG/M
3300031259\|Ga0302187_10035281	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300031259\|Ga0302187_10097739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1680	Open in IMG/M
3300031259\|Ga0302187_10140543	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300031259\|Ga0302187_10163713	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031259\|Ga0302187_10570191	Not Available	509	Open in IMG/M
3300031670\|Ga0307374_10150012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1815	Open in IMG/M
3300031722\|Ga0311351_10072877	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300033824\|Ga0334840_074072	Not Available	975	Open in IMG/M
3300033890\|Ga0334810_090211	Not Available	738	Open in IMG/M
3300034065\|Ga0334827_138596	Not Available	766	Open in IMG/M
3300034163\|Ga0370515_0088516	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.44%
Aquatic	Environmental → Aquatic	6.72%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	78.15%
Soil	Environmental → Terrestrial → Soil	14.29%
Freshwater	Environmental → Aquatic → Freshwater	6.72%
Peat Moss	Host-Associated → Plants → Peat Moss	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	78.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Loam	Environmental → Terrestrial → Soil → Loam	4.20%
Clay	Environmental → Terrestrial → Soil → Clay	0.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	78.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	44.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	8.40%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001527	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A3513AW1_11698202	3300001527	Permafrost	MTKNKAIRMPGKERPAASQLVIQKPPTTKPHPRNLAKNTKPSTDQLLK
JGI12635J15846_103158192	3300001593	Forest Soil	MTKNKAIRMPGKERPAASQLVIQKPPTTKPHPRNLAKNTKPSADQLIKPIAEGLA
JGI12635J15846_107724632	3300001593	Forest Soil	MTPSRAKAKTNAIWMPGKERPAASRLVIQRPPTTEPHLRNAGINTKPS
P5cmW16_10625521	3300001664	Permafrost	MTKPTTTATAKTKAIRMPGKERPASSRLGIQGPPPPEPHPRNSGRNTKPRPQQ
Ga0116229_101627183	3300009500	Host-Associated	MKKAKAIRKPGKERPATSQIVIQRPPTTEPHQKNLRRNTKP
Ga0116106_11514372	3300009645	Peatland	MTKARTKAKTNAIRMPGKERPAASRLVIQRPPTTEPHLRNAGKNTKPSDGQLLSQTA
Ga0181524_105202112	3300014155	Bog	MTKAKAKAMRMPGKERPAASRLVIQKPPPAEPHHRNTRKDTKPSA
Ga0181529_100953801	3300014161	Bog	MTKTETIWMPGKERPAASRLVIQKPPTTKPHHRNPGKNTKPSGS
Ga0182013_101092023	3300014492	Bog	MTNAKAKAIWMPGKERPAAARLVIQEPPTTEPHHRNHVRNTKPSGS
Ga0182013_101768934	3300014492	Bog	MTRAKANAIRMPGKERPAASRLVIQKPPTTEPHHR
Ga0182015_102139701	3300014495	Palsa	MTKARAKTNAIRMPGKERPAASRLVIQKPPTTEPHPRNT
Ga0182019_105308431	3300014498	Fen	MTKAKTKTIRMPGKERPAAARLVIQKPPTTEPYHRNHGRNTKP
Ga0187881_104502912	3300018024	Peatland	MTKARAKTNAIRMPGKERPAASRLVIQRPPTTEPHPRNARKNTKPSVGQP
Ga0187867_103545181	3300018033	Peatland	MTNAKAKAKTKAIRMPGKKRPAASRLVIRRPPTTEPHLRNTGRNTKP
Ga0187862_100749823	3300018040	Peatland	MQGTEGADLNWTNRMPGKERPAASRLVIQKPLAPELHPRNHGKNTKPSDGQLLSQTAEGL
Ga0193727_10299911	3300019886	Soil	MTKAKAIRMPGKERPAASRLEIQKPPTTEPHPRNTDRNRK
Ga0210387_105057763	3300021405	Soil	MTNAKAKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGKDTKPSA
Ga0210391_100550284	3300021433	Soil	MTTAKARAKAKTKAIRMPDKERPAASRLGIQKPLPTEPHHRNYGKNTKPSDSHSIG
Ga0224528_10247531	3300022861	Soil	MTKAKAKRRPGKERPAASRLGIQKPPTTEPHHRNLARNTKPSGSLPAGQT
Ga0224553_10608621	3300022875	Soil	MTKAKAIRMPGKERPAASRLVIQKPPTTKPHQKNLATTTKPS
Ga0224555_10306781	3300023088	Soil	MTRAKANAIRMPGKERPAASRLVIQKPPTTEPHHRNLVKD
Ga0224555_10470713	3300023088	Soil	MTNAKEKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGTNAK
Ga0224529_10071554	3300023247	Soil	MTKAKTKTKAIRMPGKERPAASRLVIQKPLPTEPHHRNTGKDTKPSASVPIGQT
Ga0208819_10125151	3300025498	Peatland	MTKAKTKTKAKAIWRPGKERPAASRLVIQRPLPTEPHPRNTGKDTKPSAGQPIGQT
Ga0208717_10292283	3300025574	Arctic Peat Soil	MTKAKTKRMPGKERPAASRLVIHRPPTTEPHQKNLNRNRNPLPASLS
Ga0208691_10639342	3300025612	Peatland	MTNAKAKAKTKAIRMPGKKRPAASRLVIQRPPTTEPHLRNTRRNTKPSDGQLLS
Ga0255350_10195281	3300026502	Soil	MTTARAKAKTNAIWMPGKERPAASRLVIQRPPTTEPHLRNTGRNTKPSDGQLLS
Ga0207785_10270931	3300026872	Tropical Forest Soil	MKAKAIRMPGKERPAASRLVIQKPPTTEPHHRNAGEDTKPSDGQPI
Ga0208994_10124543	3300027164	Forest Soil	MTNAKARAKTKAIRMPGKERPAASRLVIQRPPTTEPHLRNTGRNTKPSDGLL
Ga0207761_10589311	3300027516	Tropical Forest Soil	MKAKAIRMPGKERPAASRLVIQKPPTTEPHHRNAGED
Ga0302151_101237162	3300028562	Bog	MTRAKAKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPP
Ga0302147_100516793	3300028566	Bog	VTKAKTIWMPGKERPAASRLVIQKPPTTKPHHRNPGKNTKPSGSLPI
Ga0302147_101907371	3300028566	Bog	MTKAKAKAMRRPGKERPAVSRLVIQKPLPAKPHHRNHGKITKPSA
Ga0302153_100545441	3300028574	Bog	MTKARAKAKAIRMPGKERPAASRLVIQKPPTTEPHHRNYGKNTKPSGSQPIGQT
Ga0302166_101459552	3300028652	Fen	MTTAKAKAIWMPGKERPAASRLVIQKPPTTKHHQKNLCRNTKPPAGQPIR
Ga0302165_100133583	3300028678	Fen	MTKAKTKRMPGKERPAAARLVIQRPPTTKLHQKNL
Ga0302214_10313483	3300028736	Fen	MTKARAKTNAIRMPGKERPAAARLVIQRPPTTEPHLR
Ga0302156_103536362	3300028748	Bog	MMKAKAKPNAIRMPGKERPAASRLVIQKPPTTEPHHRNAGKDTKPSAGQPIWLTA
Ga0302202_100865301	3300028762	Bog	MTNAKAKAKTKAIRMPGKKRPAASRLVIRRPPTTEPHLRNTGRNTKPSDGQLLSQTAEGL
Ga0302223_102279951	3300028781	Palsa	MTNAKAKAKTKAIWMPGKERPAASRLVIQRPPTTKPHQKNLCRNTKPS
Ga0302279_100723811	3300028783	Bog	MTKARAKAKAIRMPGKERPAASRLVIQKPPTTEPHHRNTGTNAKPSAGLPSRL
Ga0302201_100419763	3300028785	Bog	MTKAKTKRMPGKERPAASRLVIQRPPTTKLHQKNPCRNTKPSDGQLLSQTAEG
Ga0302201_100656803	3300028785	Bog	VTKAKTIWMPGKERPAASRLVIQKPPTTKPHHRNPGKNTKPSGSLPIGQTAEGLD
Ga0302201_102870371	3300028785	Bog	MTKTKAKTMPGKVRPVAARLVIQKPPTTKPHQKKICRNTKPS
Ga0302189_104041631	3300028788	Bog	MTNAKAKAKTKAIRMPGKKRPAASRLVIRRPPTTEPHLRNTGRNTKPSD
Ga0302222_100639391	3300028798	Palsa	MTKNKAIRMPGKERPAASQLVIQKPPTTNPHPRNLAKNTK
Ga0302221_101496891	3300028806	Palsa	MTNARAKTKAIRMPGKERPAASRLVIQKPPTTEPHHRNTGKNTKPSVGQ
Ga0302228_101902691	3300028808	Palsa	MTKARAKTNAIRNAGQKTPGGVATRIQRPPTTEPHQKN
Ga0302268_10312011	3300028854	Bog	MTRAKTKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPPAGQPIG
Ga0302265_10276966	3300028859	Bog	MMKAKAKPNAIRMPGKERPAASRLVIQKPPTTEPHHRNAGKDTKPSAGQPIWLTAEG
Ga0302278_100501391	3300028866	Bog	MTNTKARAKTKAIRMPGKERPAASRLVIQKPPTTEPHLRNAGRNTKPSDGQLL
Ga0302146_102927301	3300028867	Bog	MTNAKAKAKTKAIRMPGKKRPASSRLVIQRPPTTEPHLRNAGRNTKP
Ga0302146_102958892	3300028867	Bog	MTNARAKAKAKTKAIRMPGKERPAASRLVIQRPPTTEPHQKNLCRNTKPSAGQPI
Ga0302197_100310315	3300028873	Bog	MTKTKAKTMPGKVRPAAARLVIQKPPTTKPHQKKIC
Ga0302197_101445281	3300028873	Bog	MTKAKAKRRPGKERPAASRLGIQKPPTTEPHHRNLARNTKP
Ga0302197_102640911	3300028873	Bog	MTNAKAKAIWMPGKERPAASRLVIQKPPTTEPHHRNICR
Ga0302155_100197581	3300028874	Bog	MTNTKAKAKTRAIRMPGKERPAASRLVIQKPPTTEPHLRNAGRNTK
Ga0311368_105443961	3300029882	Palsa	MTNAKAKAKTKAIRMPGKKRPAASRLVIQRPPTTEPHLRNTGRNTKPSDGQLL
Ga0311327_100661604	3300029883	Bog	MTKAKTKRMPGKERPAASRLVIQRPPTTKLHQKNLCRNTKPSDGQL
Ga0311327_105205492	3300029883	Bog	MTKAKAIRMPGKERPAASQFVIQKPLPTEPHHRNHAKNTKPSGSQPIGQT
Ga0311341_101578151	3300029908	Bog	MTKAKTKRMPGKERPAASRLVIQRPPTTKLHQKNLCRNTKPSTGQ
Ga0311369_101117543	3300029910	Palsa	MTNAKAKAKTKAIRMPGKKRPAASRLVIQRPPTTEPHLRNTGRNTKPSDGQLLS
Ga0311362_101625131	3300029913	Bog	MTRAKAKTKAIWMPGKERPAASRLVIQRPLPAEPHPRNTGK
Ga0311362_101891701	3300029913	Bog	MTKAKTKRMPGKERPAASRLVIQRPPTTKLHQKNLCRNTKPSDGQLLSQ
Ga0311358_101028794	3300029915	Bog	MTRAKTKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPPAGQPIGQTP
Ga0311326_101062463	3300029917	Bog	MTKVKTKRMPGKERPAASRLVIQRPPTTKLHQKNLCR
Ga0311363_111864502	3300029922	Fen	MTKNKAIRMPGKERPATSQLVIQKPPTTKPHPRNLAKNTKPSADQLI
Ga0311330_108690981	3300029945	Bog	MTKNKAIRMPGKERPAASQLVIQKPPTMKPHPRNLAKNTKP
Ga0311371_110493213	3300029951	Palsa	MTKNKAIRMPGKERPAASQLVIQKPPTTKPHPRNLAKNTKPF
Ga0311371_114733181	3300029951	Palsa	MTKAKTKRMPGKERPAASRLVIQRPPTTKPHQKNLYKNKKPS
Ga0311346_101595544	3300029952	Bog	MTKAKTKRMPGKERPAASRLVIQRPPTTKLHQKNPCR
Ga0311331_106819941	3300029954	Bog	MINANAKAIWMPGKERPAASRLVIQKPPTTEPHHRNAGKDTKPSAGQPV
Ga0311331_111097792	3300029954	Bog	MTNAKAKAKTKAIWMPGKERPAASRLVIQRPPTTKPHQKNL
Ga0311331_112066701	3300029954	Bog	MTKAKAKKMPGKERPAASRLAIQKPPTTEPHHRNAGKNTK
Ga0311342_100711451	3300029955	Bog	MTNAKAKAKAKAIRMPGKERPATSQTRIQRPPTTEPHLRNAGRNTKPSDGQLLS
Ga0311342_105687572	3300029955	Bog	MTKAKTKRMPGKERPAAARLVIQRPPTTKLHQKNLSRN
Ga0302277_10316004	3300029982	Bog	MTKAKAKAIRMPGKERPAASRLGIQKPPTTKPHQKNLATTTKPSASQPIG
Ga0302280_10984581	3300029985	Fen	MTRAKTKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPPAGQPIGQTPEG
Ga0302280_12708971	3300029985	Fen	MTRAKANAIRMPGKERPAASRLVIQKPPTTEPHHRNLVKDTKPSA
Ga0302188_102677521	3300029986	Bog	MTNAKAKAKAKAIRMPGKERPATSQTRIQRPPTTEPHLRNAGRNTKPSDGQLLSQTAEG
Ga0302276_100158861	3300029992	Bog	MTKARAKAKAIRMPGKERPAASRLVIQKPPTTEPHHRNYGKNTKPSGSQPI
Ga0302276_100462571	3300029992	Bog	MTNAKEKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGTNAKPSA
Ga0302304_100364721	3300029993	Palsa	MTKAKTKRMPGKERPAASRLVIQRPPTTKPHQKNLYKNKKPSAGQPIRQTAE
Ga0302270_104779531	3300030011	Bog	MTKAKAIRMPGKERPAASRLVIQKPLPTEPHHRNHAKNTKPS
Ga0302300_10289443	3300030042	Palsa	MTKNKAIRMPGKERPAASQLVIQKPPTMKPHPRNLAKNTKPSTDQLLKP
Ga0302281_100183991	3300030044	Fen	MTNAKAKAKAKAIRMPGKERPAASRLVIQRPPTTEPHLRNAGRNTKPSDGQLL
Ga0302281_100494521	3300030044	Fen	MMKAKAKPNAIRMPGKERPAASRLVIQKPPTTEPHHRNAGKDTKPSAGQP
Ga0302305_12519561	3300030046	Palsa	MTKAKAKTKAIWMPGKERPAASRLVIQRPPTTKPHQKNLCRNTKPSA
Ga0302195_100450993	3300030051	Bog	MTRAKTKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPPAGQPIGQTPDGLDH
Ga0302195_102022351	3300030051	Bog	MTRAKANAIRMPGKERPAASRLVIQKPPTTEPHHRNLVKDTKPSAS
Ga0302182_103036592	3300030054	Palsa	MTNAKAKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGKDTKPSAGQPIRL
Ga0302182_103309962	3300030054	Palsa	MTKPTTTATAKTKAIRMPGKERPAASRLGIQGPTTPESHLRNTG
Ga0302196_104268151	3300030225	Bog	MTNAKAKAIWMPGKERPAAARLVIQKPPTTEPHHRNTGKDTK
Ga0302192_102933062	3300030507	Bog	MTNAKAKAIWMPGKERPAASRLVIQKPPTTEPHHR
Ga0302183_100641733	3300030509	Palsa	MTKNKAIRMPGKERPAASQLVIQKPPTTKPHPRNLAKNTKPSTDQLLKPIAEGLEY
Ga0302275_104305161	3300030518	Bog	MTNTKAKAKTRAIRMPGKERPAASRLVIQKPPTTEPHLRNDGR
Ga0311372_107897613	3300030520	Palsa	MTNARAKTKAIRMPGKERPAASRLVIQKPPTTEPHHRNTGKNTKPSVGQPIGQTA
Ga0311356_111008791	3300030617	Palsa	MTNAKAKAIWMPGKERPAAARLVIQKPPTTEPHHRNI
Ga0311354_103212333	3300030618	Palsa	MTKAKAKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGKD
Ga0311354_103643124	3300030618	Palsa	MTKNKAIRMPGKERPAASQLVIQKPPTTNPHPRNLAKNTKP
Ga0311354_103967381	3300030618	Palsa	MTNAKAKAIWMPGKERPAASRLVIQKPLTTEPHHRNTSKDTKPSAGQPISLTA
Ga0311345_106818461	3300030688	Bog	MTRAKAKTIWKPGKERPAASRLVIQKPPTTKPHQKNLCRNTKPPAGQPI
Ga0302323_1000086121	3300031232	Fen	MTKAKTKRMPGKERPAAARLVIQRPPTTKLHQKNLSRNTKPS
Ga0302324_1000681331	3300031236	Palsa	MTKAKTKRMPGKERPAASRLVIQRPPTTKPHQKNLYKNKKPSAGQPIR
Ga0302318_100207636	3300031258	Bog	MTRAKANAIRMPGKERPAASRLVIQKPPTTEPHHRNLV
Ga0302318_105786101	3300031258	Bog	MTKAKAKAMRRPGKERPAVSRLVIQKPLPAKPHHRNHGKITKPSASQ
Ga0302187_1000174525	3300031259	Bog	MTNAKAKAIWMPGKERPAAARLVIQKPPTTEPHHRNTGK
Ga0302187_100352811	3300031259	Bog	MTRAKAKAKAIWMPGKERPAASRLVIQKPPTTKPHQKTLCR
Ga0302187_100977393	3300031259	Bog	MTRAKTKAKAIWMPGKERPAASRLVIQKPPTTKPHQKNL
Ga0302187_101405431	3300031259	Bog	MTNTKAKAKTRAIRMPGKERPAASRLVIQKPPTTEPHLRNAGRNTKPSD
Ga0302187_101637131	3300031259	Bog	MTNAKEKAIWMPGKERPAASRLVIQKPPTTEPHHRNTGTNAKPSAGLPSRLTAEGL
Ga0302187_105701911	3300031259	Bog	MTNAKAKAKTKAIWMPGKERPAASRLVIQKPPTTEPHHR
Ga0302326_118515061	3300031525	Palsa	MTNAKAKAKTKAIRMPGKKRPAASRLVIQRPPTTEPHLRNTGRN
Ga0307374_101500123	3300031670	Soil	MTRAKAKAIWKPGKERPAASRLVIQKPPTTKPHQKN
Ga0311351_100728773	3300031722	Fen	MTKAKTKRMPGKERPAAARLVIQRPPTTKLHQKNLCRKTKPSSGQPIGQTAEGLV
Ga0334840_074072_1_162	3300033824	Soil	MTTARAKANAKTKAIRMPGKERPAASRLVIQRPPTTEPHQKNLCRNTKPSTGQP
Ga0334810_090211_607_738	3300033890	Soil	MTKAKTKAKAIWMPGKERPAASRLVIQKPLPPEPHHRNHGKNTK
Ga0334827_138596_645_764	3300034065	Soil	MMKAKAKPNAIRMPGKERPAASRLVIQKPPTTEPHHRNAG
Ga0370515_0088516_1206_1340	3300034163	Untreated Peat Soil	MTKAKAIWMPGKERPAASRLVIQKPPTTEPHPRNTGKDTKPSAGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences