Basic Information | |
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Family ID | F075421 |
Family Type | Metagenome |
Number of Sequences | 119 |
Average Sequence Length | 45 residues |
Representative Sequence | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHSPKPQ |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 119 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 62.18 % |
% of genes near scaffold ends (potentially truncated) | 35.29 % |
% of genes from short scaffolds (< 2000 bps) | 71.43 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.18 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Duplodnaviria (60.504 % of family members) |
NCBI Taxonomy ID | 2731341 |
Taxonomy | All Organisms → Viruses → Duplodnaviria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (45.378 % of family members) |
Environment Ontology (ENVO) | Unclassified (80.672 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (86.555 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 4.11% β-sheet: 0.00% Coil/Unstructured: 95.89% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.18 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Marine Surface Seawater Deep Subsurface Seawater Aqueous Seawater Marine Surface Water Sackhole Brine Freshwater To Marine Saline Gradient Seawater Salt Marsh Marine Marine Estuarine Pelagic Marine Seawater Marine Seawater Pond Water Sediment |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_1000026318 | 3300000101 | Marine | MITSINFGGLGKPAPKPKPLIAPLPEEYKQPQPNLTIKNRPPKS* |
DelMOSum2010_101271482 | 3300000101 | Marine | MITGINFGGLGKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI* |
JGI24003J15210_100081726 | 3300001460 | Marine | MIAAINFGGLSKPAPKPKPLIAPLPEEYKQPETNQTIKNHTPKQQ* |
JGI24003J15210_100140833 | 3300001460 | Marine | VITGIRFGGLGKPAPKPKPMIAPLPEEYKQPKPNQVIKNYPPKSI* |
JGI24003J15210_100152412 | 3300001460 | Marine | MITAINFGGLSKPAPKPKPIIAPLPEEYKQPSPNQTIKNHSPKPQ* |
JGI24003J15210_100183664 | 3300001460 | Marine | MITTINFGGLSKPAPKPKALVAPLPDEYKQPPPIQTIKNHYPKPQ* |
JGI24003J15210_100200933 | 3300001460 | Marine | MITTINFGGLGKPAPKPKALVAPLPDEYKQSPPIQTIKNHYPKPQ* |
JGI24003J15210_100311602 | 3300001460 | Marine | MITSINFGGLGKPAPKPKPLVAPLPEEYKQPQPNLTIKNRPPKS* |
JGI24003J15210_100572343 | 3300001460 | Marine | LITGIRFGGLGKPQPKPKPIIAPLPEEYKQPKPNLIIKNHTPKPI* |
JGI24003J15210_100605182 | 3300001460 | Marine | LITAINFGGLSKPQPKPKPKMAPLPQEYEQPKPNLTIKNRPQKYI* |
JGI24003J15210_100707852 | 3300001460 | Marine | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ* |
JGI24003J15210_100870561 | 3300001460 | Marine | GLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHNPKPQ* |
JGI24003J15210_101131141 | 3300001460 | Marine | MISSVNFGGLSTTSSKSQPLVAPLPEEYKQPAPNTTIKNPAPKPQ* |
JGI24004J15324_100386903 | 3300001472 | Marine | MITAINFGGLSKPAPKPKLLIAPLPEEYKQPSPDQTIKNHSPKPQ* |
JGI24005J15628_100256514 | 3300001589 | Marine | TIRRWCCTMITAINFGGLSKPAPKPKLLIAPLPEEYKQPSPDQTIKNHSPKPQ* |
JGI25127J35165_10196392 | 3300002482 | Marine | MIIAVNFGGVSKPASPPTTLIAPLPQEYMQPKPNTTIKNPAPKPQ* |
Ga0073579_13240413 | 3300005239 | Marine | MITAINFGGLSKPTPKPQPLVAPLPEEYKQPAPNQTIKNHSPKPQ* |
Ga0073579_13823802 | 3300005239 | Marine | MITGINFGGLGKPTPKTKPLIAPVPLEYAKPQTLQVIKNHTPKPQ* |
Ga0078893_110978762 | 3300005837 | Marine Surface Water | VITAINFNGIGKPLPKSKPLVAPLPEEYKQPQPNLTIKNHSPKPQ* |
Ga0070743_102215932 | 3300005941 | Estuarine | MITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHNPKPQ* |
Ga0075462_100155683 | 3300006027 | Aqueous | MITGIHFGGLGKPQPKPKPKIATLPEEYKRPTPNQTIKNHSPKPQ* |
Ga0098048_10078682 | 3300006752 | Marine | MITGINFGGLGKPQPKPKPRIAPLPEEYKQPKPNLTIKNRPQKSI* |
Ga0070749_105225852 | 3300006802 | Aqueous | MITGINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0070754_101036632 | 3300006810 | Aqueous | GLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0070754_101547802 | 3300006810 | Aqueous | MITAINFGGLSKPTPKPQPLVAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0070745_12824771 | 3300007344 | Aqueous | RRHCTMITAINFGGLSKPTPKPQPLVAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0070751_12527952 | 3300007640 | Aqueous | GKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0115371_112656534 | 3300008470 | Sediment | LITGIRFGGLGKPQPKAKPIIAPLPEEYKQPPKVQVIKNHTPKPL* |
Ga0102960_11003352 | 3300009000 | Pond Water | MITGINFGGLGKPKPKPEPKIAPLPEEYKQPTSNQTIKNHCPKPQ* |
Ga0114918_100589544 | 3300009149 | Deep Subsurface | VITGINFGGLGKPQPKPKPKIAPLPIEYQQPKPNQTIKNHPPKSI* |
Ga0114995_104550852 | 3300009172 | Marine | MITGINFGGLEKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI* |
Ga0114995_105414012 | 3300009172 | Marine | LITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL* |
Ga0114998_101161062 | 3300009422 | Marine | LRRRYCNLITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL* |
Ga0114998_101163791 | 3300009422 | Marine | RWCCDMITGINFGGLGKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI* |
Ga0114997_101593943 | 3300009425 | Marine | MITGIVFGGLGKPASKPKPLLAPLPAEYQQPKPNLTIKNHTPKPL* |
Ga0115545_13258492 | 3300009433 | Pelagic Marine | MITGINFGGLEKPKPKPTPKVAPLPAEYLQPKSNNKIKNRSPKSI* |
Ga0115003_105723382 | 3300009512 | Marine | MITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL* |
Ga0115003_106553342 | 3300009512 | Marine | GIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL* |
Ga0115000_108183601 | 3300009705 | Marine | NMITGINFGGLEKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI* |
Ga0115001_103176301 | 3300009785 | Marine | KPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL* |
Ga0115001_109992742 | 3300009785 | Marine | MITGINFGGLGKPQPKPKPKIAPLPQEYQQPKPNL |
Ga0160423_106923612 | 3300012920 | Surface Seawater | MIIAVNFGGIHKPAPKPAPLVAPLPEEYKQEPANLTIKNPYPKPQ* |
Ga0180120_100132933 | 3300017697 | Freshwater To Marine Saline Gradient | MITGINFSGLEKPKPKPKPTPKVAPLPAEYLQPKSNNKIKNRSPKSI |
Ga0181377_10136925 | 3300017706 | Marine | MITAINFGGLSKPAPKPQPLVAPLPEEYKQTPSNQTIKNHSPKPQ |
Ga0181398_11520072 | 3300017725 | Seawater | GKTLRRWCCDMITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0181401_10060656 | 3300017727 | Seawater | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCP |
Ga0181418_11494332 | 3300017740 | Seawater | MITSINFGGLGKPAPKPKPLVAPLPEEYKQPTPNTTIKN |
Ga0181421_10223391 | 3300017741 | Seawater | TRRRHCRMITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHSPKPQ |
Ga0181421_10334023 | 3300017741 | Seawater | TRRRHCRMITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHNPKPQ |
Ga0181393_10169605 | 3300017748 | Seawater | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHSPKPQ |
Ga0187219_11523851 | 3300017751 | Seawater | YRRRHCRMITAINFGGLSKPAPKPVPLVAPLPEEYKQTSSNQTIKNHNPKPQ |
Ga0181400_10056934 | 3300017752 | Seawater | MITAINFGGLGKPKPKTKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0181407_11657342 | 3300017753 | Seawater | MITAINFGGLGKPQPKPKPLVAPLPQEYKQTSSNQVIKNHRPKPQ |
Ga0181410_11500932 | 3300017763 | Seawater | NFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0181423_10790583 | 3300017781 | Seawater | MITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHCPKPQ |
Ga0181380_12618601 | 3300017782 | Seawater | INFGGLSKPAPKPQPLVAPLPQEYKQTSSNQTIKNHSPKPQ |
Ga0181379_10953982 | 3300017783 | Seawater | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNHTIKNHCPKPQ |
Ga0181424_104078281 | 3300017786 | Seawater | TAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHSPKPQ |
Ga0181607_100669512 | 3300017950 | Salt Marsh | MITGINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0181600_101121832 | 3300018036 | Salt Marsh | MITGINFGGLEKPKPKPTPKVAPLPAEYLQPKSNNKIKNRSPKSI |
Ga0206125_100600893 | 3300020165 | Seawater | MITAINFGGLSKPAPKPQPLIAPLPEEYKQSPSNQTIKNPAPKPQ |
Ga0206125_102363912 | 3300020165 | Seawater | MITAINFGGLSKPAPKPAPLVAPLPAEYNQPRLKQTVKNLKPKPIN |
Ga0206124_103392461 | 3300020175 | Seawater | TTRRRHCRMITAINFGGLSKPAPKPQPLIAPLPEEYKQSPSNQTIKNPAPKPQ |
Ga0211678_101501942 | 3300020388 | Marine | MITSINFGGLGKPAPKPKPLVAPLPEEYKQPQPNLTIKNRPPKS |
Ga0211695_101498331 | 3300020441 | Marine | AINFGGLSKPAPKPATLIAPLPAEYKQPTPNTTIKNPAPKPQ |
Ga0211676_100926412 | 3300020463 | Marine | MITAINFGGLSKPAPKPLPLVAPQPVEYTQPAPNQTIKNHSPKPQ |
Ga0211577_100460532 | 3300020469 | Marine | MITAINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0206126_102392752 | 3300020595 | Seawater | LGKPQTKPKPKIAPLPEEYKQPKPNLTIKNRPHKSI |
Ga0206677_100271781 | 3300021085 | Seawater | MITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHNPKPQ |
Ga0206682_100004316 | 3300021185 | Seawater | MITAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHSPKPQ |
Ga0206123_103758932 | 3300021365 | Seawater | MITAINFGGLSKPAPKPQPLVAPLPQEYKQTSSNQTIKNHSPKPQ |
Ga0213869_100000286 | 3300021375 | Seawater | MITAINFGGLSKPTPKPQPLVAPLPEEYKQPAPNQTIKNHSPKPQ |
Ga0213869_101545472 | 3300021375 | Seawater | MITGINFGGLEKPKPKPKPTPKVAPLPAEYLQPKSNNKIKNRSPKSI |
Ga0196899_10644372 | 3300022187 | Aqueous | MITGIHFGGLGKPQPKPKPKIATLPEEYKRPTPNQTIKNHSPKPQ |
Ga0196899_12054562 | 3300022187 | Aqueous | MITAINFGGLSKPTPKPQPLVAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0255752_104084442 | 3300022929 | Salt Marsh | MITGINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIK |
Ga0255777_105370311 | 3300023175 | Salt Marsh | SNMITGINFGGLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
(restricted) Ga0233412_100248923 | 3300023210 | Seawater | MITAINFGGLSKPAPKPQPLVAPLPEEYKQTSSNQTIKNHNPKPQ |
Ga0255763_10905921 | 3300023273 | Salt Marsh | GLGKPKPKPKPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0233402_10685152 | 3300024229 | Seawater | MITAINFGGLSKPAPKPVPLVAPLPEEYKQTSSNQTIKNHSPKPQ |
Ga0210003_10366962 | 3300024262 | Deep Subsurface | VITGINFGGLGKPQPKPKPKIAPLPIEYQQPKPNQTIKNHPPKSI |
Ga0207905_10002174 | 3300025048 | Marine | LITGIRFGGLGKPQPKPKPIIAPLPEEYKQPKPNLIIKNHTPKPI |
Ga0208667_10530671 | 3300025070 | Marine | MITGINFGGLGKPQPKPKPRIAPLPEEYKQPKPNLTIKNRPQKSI |
Ga0209535_10127822 | 3300025120 | Marine | MISSVNFGGLSTTSSKSQPLVAPLPEEYKQPAPNTTIKNPAPKPQ |
Ga0209535_10133954 | 3300025120 | Marine | MIAAINFGGLSKPAPKPKPLIAPLPEEYKQPETNQTIKNHTPKQQ |
Ga0209535_10255873 | 3300025120 | Marine | MITTINFGGLGKPAPKPKALVAPLPDEYKQSPPIQTIKNHYPKPQ |
Ga0209535_10271864 | 3300025120 | Marine | VITGIRFGGLGKPAPKPKPMIAPLPEEYKQPKPNQVIKNYPPKSI |
Ga0209535_10273692 | 3300025120 | Marine | MITTINFGGLSKPAPKPKALVAPLPDEYKQPPPIQTIKNHYPKPQ |
Ga0209535_10293413 | 3300025120 | Marine | VITGINFGGLGKPQPKPKPKIAPLPQEYQQPKPNLTIKNHPPKSI |
Ga0209535_10396662 | 3300025120 | Marine | MITAINFGGLSKPAPKPKLLIAPLPEEYKQPSPDQTIKNHSPKPQ |
Ga0209535_10512473 | 3300025120 | Marine | MITAINFGGLSKPAPKPKPIIAPLPEEYKQPSPNQTIKNHSPKPQ |
Ga0209535_10571522 | 3300025120 | Marine | LITAINFGGLSKPQPKPKPKMAPLPQEYEQPKPNLTIKNRPQKYI |
Ga0209535_11320631 | 3300025120 | Marine | LSKPAPKPQPLVAPLPQEYKQTSSNQVIKNHRPKPQ |
Ga0209535_11410572 | 3300025120 | Marine | MITGINFRGLGKPQPKPRPKIAPLPQEYQQPKPNLTIKNRPQKSI |
Ga0209348_10238281 | 3300025127 | Marine | MIIAVNFGGVSKPASPPTTLIAPLPQEYMQPKPNTTIKNLAPKPQ |
Ga0209336_100041934 | 3300025137 | Marine | MITGINFGGLGKPQPKPKPKIAPLPEEYKQPKPNLTIKNRPQKSI |
Ga0209634_10823252 | 3300025138 | Marine | MITSINFGGLSKPAPKPKPIVAPLPEEYKQPSPNLTIKNHIPKPL |
Ga0209634_13300452 | 3300025138 | Marine | MITAINFGGLSKPAPKPAPLVVPLPVEYNQPRLNQTVKNLKPKPIN |
Ga0209337_13054502 | 3300025168 | Marine | GINFGGLGKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI |
Ga0209307_12450872 | 3300025832 | Pelagic Marine | SKPATKPKPLVAPLPAEYKQPVKLITIKNTSPKPQ |
Ga0209932_10950701 | 3300026183 | Pond Water | GINFGGLGKPKPKPEPKIAPLPEEYKQPTSNQTIKNHCPKPQ |
Ga0209710_10784772 | 3300027687 | Marine | MITGINFGGLGKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI |
Ga0209710_12021231 | 3300027687 | Marine | TLRRRYCNLITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0209710_12928182 | 3300027687 | Marine | MITGINFGGLEKPQPKPKPKIAPLPQEYQQPKPNLTIKNRPQKSI |
Ga0209192_100654482 | 3300027752 | Marine | LITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0209709_101178822 | 3300027779 | Marine | MITGIVFGGLGKPASKPKPLLAPLPAEYQQPKPNLTIKNHTPKPL |
Ga0209830_101266581 | 3300027791 | Marine | LRRRYCNLITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
(restricted) Ga0233415_102919631 | 3300027861 | Seawater | MITSINFGGLGKPAPKPKPLIAPLPEEYKQPQPNLTIKNRPPKS |
Ga0228674_10330301 | 3300028008 | Seawater | FGGLSKPAPKPVPLVAPLPEEYKQTSSNQTIKNHSPKPQ |
Ga0228615_11008351 | 3300028418 | Seawater | TAINFGGLGKPQPKPKPLVAPLPEEYKQTSSNQTIKNHNPKPQ |
Ga0307488_101268793 | 3300031519 | Sackhole Brine | LITGVRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0307488_101943892 | 3300031519 | Sackhole Brine | MITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0307488_103669812 | 3300031519 | Sackhole Brine | QSKTVRRRYCNLITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0307488_104485911 | 3300031519 | Sackhole Brine | HCRMITGINFGGLGKPQPKPKPKIAPLPEEYKQPKPNLTIKNRPQKSI |
Ga0307999_10092932 | 3300031608 | Marine | LITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKQNLTIKNHTPKPL |
Ga0302114_101760372 | 3300031621 | Marine | MITGINFGGLGKPQPKPKPNIAPLPQEYQQPKPNLTIKNRPQKSI |
Ga0302114_102959871 | 3300031621 | Marine | GGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0302126_101016341 | 3300031622 | Marine | TFRRRHCNLITGIRFGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
Ga0302125_100687862 | 3300031638 | Marine | FGGLGKPQPKAKPIIAPLPEEYKQPKPNLTIKNHTPKPL |
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