Metagenome / Metatranscriptome Family F075438

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075438
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	77 residues
Representative Sequence	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLE
Number of Associated Samples	97
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	92.44 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.277 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.739 % of family members)
Environment Ontology (ENVO)	Unclassified (58.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.378 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.82% β-sheet: 0.00% Coil/Unstructured: 41.18%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04586	Peptidase_S78	46.22
PF01471	PG_binding_1	1.68
PF05065	Phage_capsid	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	46.22
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.28 %
Unclassified	root	N/A	5.88 %
Viruses	superkingdom	All Organisms → Viruses	0.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.28 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.76 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.76 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.39 %
Unclassified	root	N/A	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	46.22 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	6.72 %
Unclassified	root	N/A	5.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.22 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	6.72 %
Unclassified	root	N/A	5.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.22 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6.72 %
Unclassified	root	N/A	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.22 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	6.72 %
Unclassified	root	N/A	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.22 %
Frankia sp. Cj3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	6.72 %
Unclassified	root	N/A	5.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001449\|JGI20208J14878_1003241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2821	Open in IMG/M
3300002907\|JGI25613J43889_10197289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300004800\|Ga0058861_11647256	All Organisms → Viruses → Predicted Viral	1108	Open in IMG/M
3300005341\|Ga0070691_10182782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1092	Open in IMG/M
3300005341\|Ga0070691_10422445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300005436\|Ga0070713_100396132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1289	Open in IMG/M
3300005530\|Ga0070679_101977209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005563\|Ga0068855_100620264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1164	Open in IMG/M
3300005616\|Ga0068852_100216777	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300005841\|Ga0068863_102682782	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006028\|Ga0070717_11554256	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300006579\|Ga0074054_11369609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300009545\|Ga0105237_10420532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1342	Open in IMG/M
3300009551\|Ga0105238_11301452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	753	Open in IMG/M
3300010320\|Ga0134109_10192158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300010361\|Ga0126378_11430006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300010376\|Ga0126381_102825525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300010396\|Ga0134126_10086937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3860	Open in IMG/M
3300011009\|Ga0129318_10326876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300011271\|Ga0137393_10115665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2206	Open in IMG/M
3300011271\|Ga0137393_10525570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300012350\|Ga0137372_10061046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3282	Open in IMG/M
3300012354\|Ga0137366_10063634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2815	Open in IMG/M
3300012985\|Ga0164308_12050262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	533	Open in IMG/M
3300013104\|Ga0157370_10690905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	931	Open in IMG/M
3300013296\|Ga0157374_10652481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300013307\|Ga0157372_11597299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300016270\|Ga0182036_11187691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300016319\|Ga0182033_10889664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300016319\|Ga0182033_11449474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300016357\|Ga0182032_10638528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300016371\|Ga0182034_11261680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300016387\|Ga0182040_10434170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1037	Open in IMG/M
3300016404\|Ga0182037_10937579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300019999\|Ga0193718_1061880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300020021\|Ga0193726_1254530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300020069\|Ga0197907_10028745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300020070\|Ga0206356_11095376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300020076\|Ga0206355_1685226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300024181\|Ga0247693_1042933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300024222\|Ga0247691_1020669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1032	Open in IMG/M
3300024232\|Ga0247664_1039910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1089	Open in IMG/M
3300024246\|Ga0247680_1033753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300024290\|Ga0247667_1038923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300024325\|Ga0247678_1061664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300024331\|Ga0247668_1068075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300025913\|Ga0207695_11377525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300025921\|Ga0207652_10678949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	920	Open in IMG/M
3300025924\|Ga0207694_10486594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300025949\|Ga0207667_10610830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300026035\|Ga0207703_11810799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300026142\|Ga0207698_10432181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1266	Open in IMG/M
3300027063\|Ga0207762_1066899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300031543\|Ga0318516_10294040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300031543\|Ga0318516_10768990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300031544\|Ga0318534_10053059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2273	Open in IMG/M
3300031545\|Ga0318541_10267970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031546\|Ga0318538_10219236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1018	Open in IMG/M
3300031546\|Ga0318538_10369152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300031640\|Ga0318555_10805473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300031681\|Ga0318572_10531838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300031719\|Ga0306917_10819310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300031719\|Ga0306917_10982376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300031720\|Ga0307469_12237060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300031720\|Ga0307469_12327558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300031744\|Ga0306918_10913746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300031747\|Ga0318502_10140997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1369	Open in IMG/M
3300031747\|Ga0318502_10697127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300031751\|Ga0318494_10532986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300031751\|Ga0318494_10873284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	527	Open in IMG/M
3300031765\|Ga0318554_10289433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300031768\|Ga0318509_10846297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300031769\|Ga0318526_10063038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1435	Open in IMG/M
3300031769\|Ga0318526_10365599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300031771\|Ga0318546_10182139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1428	Open in IMG/M
3300031771\|Ga0318546_10254013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1210	Open in IMG/M
3300031771\|Ga0318546_10796030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300031771\|Ga0318546_10895920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300031781\|Ga0318547_10931014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031821\|Ga0318567_10161763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1241	Open in IMG/M
3300031833\|Ga0310917_11185176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300031845\|Ga0318511_10539466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300031859\|Ga0318527_10119013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300031859\|Ga0318527_10243565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300031890\|Ga0306925_10277246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1805	Open in IMG/M
3300031890\|Ga0306925_11619862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300031893\|Ga0318536_10265651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300031894\|Ga0318522_10011953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2644	Open in IMG/M
3300031897\|Ga0318520_10995234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300031912\|Ga0306921_11199544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300031912\|Ga0306921_12199690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031942\|Ga0310916_10824917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300031942\|Ga0310916_10943799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300031947\|Ga0310909_11248029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300031954\|Ga0306926_10297187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1999	Open in IMG/M
3300031981\|Ga0318531_10559750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300032008\|Ga0318562_10511846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300032025\|Ga0318507_10106976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1171	Open in IMG/M
3300032039\|Ga0318559_10457460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300032041\|Ga0318549_10455125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300032044\|Ga0318558_10592125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300032054\|Ga0318570_10191547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300032054\|Ga0318570_10426113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300032060\|Ga0318505_10110368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300032068\|Ga0318553_10428099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300032089\|Ga0318525_10100883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1471	Open in IMG/M
3300032094\|Ga0318540_10026449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2473	Open in IMG/M
3300032261\|Ga0306920_101631350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300032770\|Ga0335085_10498628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Cj3	1390	Open in IMG/M
3300033290\|Ga0318519_10457959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300033290\|Ga0318519_10882801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300033290\|Ga0318519_10926025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.39%
Plants	Host-Associated → Plants	10.92%
Aquatic	Environmental → Aquatic	0.84%
Human	Host-Associated → Human	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Marine	Environmental → Aquatic → Marine	0.84%
Digestive System	Host-Associated → Human → Digestive System	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.67%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.04%
Coastal	Environmental → Aquatic → Marine → Coastal	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20208J14878_10032411	3300001449	Arctic Peat Soil	LTALKDILDEMARIKQELQRMETDESVTEEDDGNYRDTLLDRWEGLDADSKPIIERMEKIRGITRATDDEANLERPDGDGNGNGNGSARRGTPYRG
JGI25613J43889_101972892	3300002907	Grasslands Soil	VATLQELLDEQARIKAELQRMEGDEEVTEESDGDARDTLVKRFRDLNVRTQPLIKRMEDIRGITRAADDEGNLERPDGGSHAAGNGRYGGGTP
Ga0058861_116472561	3300004800	Host-Associated	MATLKEKQDEMARIRADLQRMEADESVTEEDSGDLRDTLLERWEQLDAECKPIIERMERVRGITRTAG
Ga0070691_101827821	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYG
Ga0070691_104224452	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANLEQPYG
Ga0070713_1003961322	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MATLKEKQEEMARIKADLQRMEADDTVTEEDSGDLRDTLVERWGQLDRECAPIIERMEKV
Ga0070679_1019772092	3300005530	Corn Rhizosphere	MATLKDKLEEMARIKAELQRMESSEDTVEENDGDLRDTLVERWQQLDAECKPIVARMERIKAITRSAS
Ga0068855_1006202642	3300005563	Corn Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANLEQPYGASKGT
Ga0068852_1002167771	3300005616	Corn Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANLEQPYGA
Ga0068863_1026827821	3300005841	Switchgrass Rhizosphere	MATLQEILDEQARIKRDLQDMESDEETTEEKDGDLRDTLVARFQELDERARPIIERMEKVRAVTRSAATEAN
Ga0070717_115542562	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATLQDILDEQARIKNELQRMEEDESVTEEDSGDLRDTLVERWEDLDKKAKPLIER
Ga0074054_113696092	3300006579	Soil	MAALQELLDEQARIKNELQRMENDDTVTEETDGDLRDSLLQRWEELDAKTKPLIERMEKIRNITRTAEDPANREEPYGASKGSGGFTG
Ga0105237_104205321	3300009545	Corn Rhizosphere	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYGASKGT
Ga0105238_113014521	3300009551	Corn Rhizosphere	MAALQELLDEQARIKAELQRMESDDSVTEETDGDLRDTLLTRWEELDLKTKPLIERM
Ga0134109_101921582	3300010320	Grasslands Soil	MATLQEILDEQARIKQELQRMEDDDTVTEEDGGDLRDTLVQRWEQLGTKAKPLIEQMEKIRAITRAAADGSNLEAGDGHGDGG
Ga0126378_114300062	3300010361	Tropical Forest Soil	MATLQEILDEQAVIKRDLQEMEDNEETTEEKDGDLRDTLVARWQELDGKTKPLIERMEKVRSITRT
Ga0126381_1028255252	3300010376	Tropical Forest Soil	MATLQAILDEQARIKGELQRMEDDDTVTEEDSGDLRDTLVERWEQLDKECKPIIERMERVRGITRAAEDPANREDGADSGSRR
Ga0134126_100869371	3300010396	Terrestrial Soil	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLSRWEELDAKSKPLIERME
Ga0129318_103268761	3300011009	Freshwater To Marine Saline Gradient	MAALKDILDEQARIKQELQRMENDETTTEEHDGDLRDTLLNQWEELDARAKPLIERMEKIRNITRTAGADPAGLEPPAGQDPPAPNGY
Ga0137393_101156651	3300011271	Vadose Zone Soil	MAALQELLDEQARIKNELQLMEDSDETTEEADGDMRDSLLQRWEELDLKTKPLIERMEKIKAITRAAEDPANLEPPYGAGKDSGGITGGRGPDLVVRNRR
Ga0137393_105255702	3300011271	Vadose Zone Soil	MAALQEILDEQARIKAELQRMENDDTVTEEDDGDLRDTLLARWEQLDKKAAPIVERMEKIRSITRAADDESNLERPDGATGGIVTAGNGRRAGPDLVTS
Ga0137372_100610463	3300012350	Vadose Zone Soil	MAALQELLDEQARIKNELQRMEDDDTVTEETDGDLRDTLLQRWEELDEKTKPLIERMEK
Ga0137366_100636343	3300012354	Vadose Zone Soil	MAALQELLDEQARIKNELQRMEDDDTVTEETDGDLRDTLLQRWEELDEKTKPLIERMEKIRAITRVAQDEANLERPDGAPGGIVSG
Ga0164308_120502622	3300012985	Soil	VAALQDILDEQARIKQELQRMEDSDETTEEGDGDLRDTLIARWEELDKKAAPIVERMERIKAITKVADD
Ga0157370_106909051	3300013104	Corn Rhizosphere	MAALQELLDEQARIKNELQRMESDDTVTEESDGDLRDTLLNRWEELDEKTRPLIERMEKIRNITRVASDDANLERP
Ga0157374_106524811	3300013296	Miscanthus Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANREEPYGAGKNTGGITGGRGP
Ga0157372_115972992	3300013307	Corn Rhizosphere	MAALQELLDEQARIKNELQRMESDDTVTEETAGELRDTLLSRWEALDAKSKPLIERMEKIRNITRTPEDPANIE
Ga0182036_111876912	3300016270	Soil	MATLNDILDEQARIKAELQTMEESDETTEETDGDYRDTLVARWQELDEKSKPIIERMERIQSITRAAATEANLERPPGHVA
Ga0182033_108397932	3300016319	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLIGRWEELDGQAKPIIERMERIRSITRSAANPGNREGGDGGGNGQPASTWAGS
Ga0182033_108896641	3300016319	Soil	MATLQDLLDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRGITRAAADPANLE
Ga0182033_114494741	3300016319	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLERPTGRDTPDLVIRNNR
Ga0182035_105308102	3300016341	Soil	MATLQEILDEQARVTAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIKSITRSAANPGNREGGDGGGNGQAAST
Ga0182032_106385282	3300016357	Soil	MATLQDSLDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRGITR
Ga0182034_112616801	3300016371	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLE
Ga0182040_104341702	3300016387	Soil	MPTLKDKLDEMARIKGELQQMEENEENTEETDGDLRDTLVARWEQLDAESKPIIARMERIRGRHRSPGRSVGARWT
Ga0182040_118527891	3300016387	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIRSITRSAAAPGNREGGDGGGNGQ
Ga0182037_109375791	3300016404	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPI
Ga0193718_10618802	3300019999	Soil	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLNRWEELDLKTKPLIERMEKIRSITRTAEDPANLETP
Ga0193726_12545301	3300020021	Soil	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANLEAPYGAGKDSGGITG
Ga0197907_100287452	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAALQELLDEQARIKNELQRMESDDTVTEETDGDLRDTLLSRWEELDAKSKPLIERME
Ga0206356_110953761	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRVAEDPANREEPYGAGKNSG
Ga0206355_16852261	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MATLQEKLDEMAAIKGELQRMEDDDSVTEEEGGDLRDTLVARWKVLDRESKPLIKRMEEVRGITRAAADPANLEGPEP
Ga0247693_10429331	3300024181	Soil	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEPPYGASKGTGGITGGRGPELVIR
Ga0247691_10206691	3300024222	Soil	MAALQELLDEQARIKNELQRMENDDSVTEETDGDLRDSLLQRWEELDAKTKPLIERMEKIRNITRTAEDPANREEP
Ga0247664_10399101	3300024232	Soil	MATLTEILDEQARIKNELQRMEDDESVTEEDSGDLRDTLVQRWEDLDKKAKPLIERMEKVRGITRAAADEG
Ga0247680_10337532	3300024246	Soil	VAALQDYLDEMARIKNELQRMESDDTVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYGASKGTG
Ga0247667_10389231	3300024290	Soil	MATLTEILDEQARIKNELQRMEDDESVTEEDSGDLRDTLVQRWEDLDKKAKPLIERMEKVRGITRAAADEGNLERPAGQGGASASRFGS
Ga0247678_10616642	3300024325	Soil	MATLQEILDEMAVIKRDLQEMEDNEETTDERDGDLRDTMVARWQELDEKSKPIIERMERVRSVTRAASTEANLERPAGQEPAKPADGGTGYAS
Ga0247668_10680751	3300024331	Soil	MATLTEILDEQARIKNELQRMEDDESVTEEDSGDLRDTLVQRWEDLDKKAKPLIERMEKVRGITRAAQDPAN
Ga0207695_113775251	3300025913	Corn Rhizosphere	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYGASKGTGGITGGRG
Ga0207652_106789492	3300025921	Corn Rhizosphere	MATLKDKLEEMARIKAELQRMESSEDTVEENDGDLRDTLVERWQQLDAECKPIVARMERIKAITRSASDPANAEGPDGAAQDAR
Ga0207694_104865942	3300025924	Corn Rhizosphere	MAALQELLDEQARIKNELQRMESDDSVTEETDGDLRDTLLQRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYGASKGT
Ga0207667_106108302	3300025949	Corn Rhizosphere	MAALQELLDEQARIKNDLQRMENDDSVTEETDGDLRDTLLARWEELDLKTKPLIERMEKIRN
Ga0207703_118107991	3300026035	Switchgrass Rhizosphere	MAALQELLDEQARIKNELQRMESDDTVTEETDGDLRDTLLSRWEELDAKSKPLIERMEKIRNITRTAEDPANLEQPYGASKGTGGITGG
Ga0207698_104321812	3300026142	Corn Rhizosphere	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAEDPANLEQPYGASKGTGGITGGRG
Ga0207762_10668992	3300027063	Tropical Forest Soil	MATLDEILDEQARIKAELQRMEDDGSILESEDGNYRDTLIARWEQLDGDAKPLIQRMEKIRGITRQ
Ga0318516_102940401	3300031543	Soil	MPALDDKLAEMARIKSELQRMEDDDSVTEESDGDLRDTLVARWKKLDEECKPIVARMQEI
Ga0318516_107689901	3300031543	Soil	MATLQEILDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRG
Ga0318534_100530593	3300031544	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNL
Ga0318541_102679702	3300031545	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIG
Ga0318538_102192362	3300031546	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDT
Ga0318538_103691521	3300031546	Soil	MPTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERI
Ga0318555_108054731	3300031640	Soil	MATLQEILDEQARIKNELQRMEDDETVTDESDGDLRDTLVARWEELDGKAKPIIARMDRVRSITRAAADPANLETPD
Ga0318572_105318382	3300031681	Soil	VSTLKEITEEQARIREELQRMEDDDTVTEEDGGDLRDTLISRWEELDSKAKPIVERMDKVRGITRAAAD
Ga0306917_108193101	3300031719	Soil	MATLNDILDEQARIKAELQTMEESDETTEETDGDYRDTLVARWQELDEKSKPIIERMERIQSITRAAATEANLERPPGHV
Ga0306917_109823761	3300031719	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDTPDLVVRTNR
Ga0307469_122370602	3300031720	Hardwood Forest Soil	VAALQDILDEQARIRQELQRMEDSDETTEENDGDLRDTLVQRWEELDTKAKPIIERMERIKAITR
Ga0307469_123275582	3300031720	Hardwood Forest Soil	MAALQELLDEQARIKAELQRMESDDTVTEETDGDLRDTLLTRWEELDLKTKPLIERMEKIRNITRTAED
Ga0306918_109137461	3300031744	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDTPDLVV
Ga0318502_101409971	3300031747	Soil	MPTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAASDEGNLERPIGRDTPDLVVRTNRDPYENLDA
Ga0318502_106971272	3300031747	Soil	MATLQEILDEQARIKNELQRMEDDETVTDESDGDLRDTLVARWEELDGKAKPIIARMDRVRSITRAAADPANLETP
Ga0318494_105329861	3300031751	Soil	MATLQEILDEQARVTAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIRSITRSAAAPG
Ga0318494_108732841	3300031751	Soil	MPTLKDKLDEMARIKGELQQMEENEETTEETDGDLRDTLVARWEQLDAESKPIIARMERIRGITRAAGDEGNLE
Ga0318554_102894331	3300031765	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLIGRWEELDGQAKPIIERMERIKSITRSAAN
Ga0318509_108462971	3300031768	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMER
Ga0318526_100630382	3300031769	Soil	VSTLKEITEEQARIREELQRMEDDDTVTEEDGGDLRDTLISRWEELDSKAKPIVERMDKVRGITRAAADPA
Ga0318526_103655992	3300031769	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLVNRWEELDGQAKPIIERMERIKSITRSAGNPAN
Ga0318546_101821392	3300031771	Soil	MATLTEILDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRGITRQAADPANLEPPDAGGSRWGAELVTRT
Ga0318546_102540132	3300031771	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLE
Ga0318546_107960302	3300031771	Soil	MATLNDILDEQARIKAELQTMEESDETTEETDGDYRDTLVARWQELDEKSKPIIERMERIQSITRAAATEANLE
Ga0318546_108959202	3300031771	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMRSI
Ga0318566_106335142	3300031779	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDTPDLVVRTNRDPYENLEAVRDRIV
Ga0318547_109310141	3300031781	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDE
Ga0318576_104849251	3300031796	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDTPDLVVRTNRDPYENLEAVRDRIVT
Ga0318523_104788451	3300031798	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLIGRWEELDGQAKPIIERMERIKSITRSAANPGNREGGDGGGNGQAASTQYG
Ga0318567_101617632	3300031821	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMERIRGITRAAGDDGNLEKPIG
Ga0310917_111851762	3300031833	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDDGNLEKP
Ga0318511_105394661	3300031845	Soil	MATLTEILDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRGITRQAADPANLEPPDAGGSRWGAE
Ga0318527_101190131	3300031859	Soil	MATLQEILDEQARIKTELQRMEDDDSVTEEDSGDLRDTLVARWELLDGKAKPLIERMEKVRGITRAASDPANLEPPDAGGSRWDGTPDLVIRT
Ga0318527_102435651	3300031859	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERME
Ga0306925_102772461	3300031890	Soil	MSTLKDKLEEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNL
Ga0306925_116198622	3300031890	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNL
Ga0318536_102656511	3300031893	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRAAGDDGNLEKPIGRDT
Ga0318522_100119533	3300031894	Soil	VSTLKEITEEQARIREELQRMEDDDTVTEEDGGDLRDTLISRWEELDSKAKPIVERMDKVRGITRAAADPANGEPAVGATDGTPE
Ga0318520_109952341	3300031897	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEG
Ga0306921_111995442	3300031912	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMERIRGITRAAGDDGNLEKPIGRDTPDLVIRSG
Ga0306921_121996901	3300031912	Soil	MPTLKDKLDEMARIKGELQQMEENEETTEETDGDLRDTLVARWEQLDAESKPIIARMERIRGITRA
Ga0310916_108249171	3300031942	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLEKPIGRDTPDLV
Ga0310916_109437991	3300031942	Soil	MATLNDILDEQARIKAELQTMEESDETTEETDGDYRDTLVARWQELDEKSKPIIERMERIQSITRAAATEANLERPPGHVAVRT
Ga0310909_112480291	3300031947	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGRDTPDLVVRTNRD
Ga0306926_102971871	3300031954	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLEKP
Ga0318531_105597502	3300031981	Soil	MATLQEILDEQARVTAELQRMETDESVTEEGDGNYRDTLIGRWEELDGQAKPIIERMERIKSITRS
Ga0318562_105118461	3300032008	Soil	MATLQEILDEQARIKNELQRMEESEEVTEESDGDLRDTLVARWELLDAKAKPLIERMERVRGITRA
Ga0318507_101069761	3300032025	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMERIRGITRTAGDEGNLEKPIGRDTPDL
Ga0318559_104574602	3300032039	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAASD
Ga0318549_104551252	3300032041	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMERIRGITRAAGDDGNLEKPIGRDTPDLVIR
Ga0318558_105921252	3300032044	Soil	MATLQDILDEQARIKNELQRMEDDDTVTEEDSGDLRDTLVARWEVLDGKAKPLIERMEKVRGITRQAADPANLEPPDAGGSRWGAELVT
Ga0318506_101762441	3300032052	Soil	MATLQEILDEQARVTAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIRSITRSAAAPGNREGGDGGGNG
Ga0318570_101915471	3300032054	Soil	MATLQEILDEQARVTAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIRSIT
Ga0318570_104261131	3300032054	Soil	MPTLKDKLDEMARIKAELQRMEEDDTVTEETEGDVRDTLVARWEQLDTESKPIIERMERIRGITRAAGDDGNLE
Ga0318505_101103682	3300032060	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAATDEGNLERPIGREPDP
Ga0318553_104280991	3300032068	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLEKPIGRDTPD
Ga0318525_101008833	3300032089	Soil	MSTLKDKLDEMARIKGELQQMEDDDTVTEENGGDLRDTLIDRWETLDAESKPIIERMERIRGITRAASDEGNLERPVGRDT
Ga0318540_100264493	3300032094	Soil	VSTLKEITEEQARIREELQRMEDDDTVTEEDGGDLRDTLISRWEELDSKAKPIVERMDKVRG
Ga0306920_1016313502	3300032261	Soil	VSTLKEITEEQARIREELQRMEDDDTVTEEDGGDLRDTLIARWEELDSKAKPIVERMDK
Ga0335085_104986282	3300032770	Soil	VAALQDLLDEQARIKSELQRMENDDSVTEEDDGDLRDTLVARWEELDAKSKPLIERMERIRGITRAAGDEGNLERPDG
Ga0318519_104579591	3300033290	Soil	MATLQEILDEQARITAELQRMETDESVTEEGDGNYRDTLINRWEELDGQAKPIIERMERIRSITRS
Ga0318519_108828011	3300033290	Soil	MATLNDILDEQARIKAELQTMEESDETTEETDGDYRDTLVARWQELDEKSKPIIERMERIQSITRAAATEANLERPPGHTAERTIGRN
Ga0318519_109260252	3300033290	Soil	MPTLKEKLDEMARIKAELQRMEDDDSVTEETEGDVRDTLIARWEQLDTESKPIIERMERIRGITRTAGDEGNLEKPIGRDTPDLVIRNNRDPYE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075438

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences