Metagenome Family F075539

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075539
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	43 residues
Representative Sequence	TLFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Number of Associated Samples	71
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.96 %
% of genes near scaffold ends (potentially truncated)	91.53 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (66.949 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.203 % of family members)
Environment Ontology (ENVO)	Unclassified (57.627 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.322 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.93603
a.24.16.0: automated matches	d1wola_	1wol	0.93503
f.14.1.4: TRPM-like (melastatin-like transient receptor potential) channels	d6bcoa2	6bco	0.9312
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.92427
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.92251

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00196	GerE	2.54
PF01471	PG_binding_1	2.54
PF01168	Ala_racemase_N	1.69
PF03060	NMO	1.69
PF00027	cNMP_binding	1.69
PF01144	CoA_trans	0.85
PF04392	ABC_sub_bind	0.85
PF12263	DUF3611	0.85
PF07345	DUF1476	0.85
PF00486	Trans_reg_C	0.85
PF04226	Transgly_assoc	0.85
PF08308	PEGA	0.85
PF00589	Phage_integrase	0.85
PF09361	Phasin_2	0.85
PF14397	ATPgrasp_ST	0.85
PF04828	GFA	0.85
PF17158	MASE4	0.85
PF02518	HATPase_c	0.85
PF13505	OMP_b-brl	0.85
PF12697	Abhydrolase_6	0.85
PF10686	YAcAr	0.85
PF13378	MR_MLE_C	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	1.69
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.69
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.85
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.85
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
All Organisms	root	All Organisms	33.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
cellular organisms	root	All Organisms → cellular organisms	33.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.64 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.63 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.85 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.85 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.78 %
Enhydrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter	0.85 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	0.85 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	0.85 %
Bradyrhizobium rifense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	0.85 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	0.85 %
unclassified Azorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium	0.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.95 %
Azorhizobium sp. 12-66-6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 12-66-6	0.85 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	0.85 %
Bradyrhizobium rifense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	0.85 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	0.85 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102127664	Not Available	1010	Open in IMG/M
3300005332\|Ga0066388_103369655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300005764\|Ga0066903_100873332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1622	Open in IMG/M
3300005764\|Ga0066903_101327969	Not Available	1345	Open in IMG/M
3300005764\|Ga0066903_102860264	Not Available	936	Open in IMG/M
3300005764\|Ga0066903_103158457	Not Available	891	Open in IMG/M
3300005764\|Ga0066903_103335212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	867	Open in IMG/M
3300005764\|Ga0066903_105286997	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_107797550	Not Available	550	Open in IMG/M
3300006059\|Ga0075017_100242182	Not Available	1317	Open in IMG/M
3300010047\|Ga0126382_10650692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300010048\|Ga0126373_10152140	Not Available	2200	Open in IMG/M
3300010048\|Ga0126373_11206807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 12-66-6	823	Open in IMG/M
3300010358\|Ga0126370_11203356	Not Available	705	Open in IMG/M
3300010359\|Ga0126376_10874184	Not Available	886	Open in IMG/M
3300010360\|Ga0126372_11769559	Not Available	661	Open in IMG/M
3300010360\|Ga0126372_12211701	Not Available	599	Open in IMG/M
3300010366\|Ga0126379_11243645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300010366\|Ga0126379_11864323	Not Available	705	Open in IMG/M
3300010376\|Ga0126381_104575927	Not Available	533	Open in IMG/M
3300010376\|Ga0126381_104975606	Not Available	510	Open in IMG/M
3300012971\|Ga0126369_13222006	Not Available	534	Open in IMG/M
3300016270\|Ga0182036_10805146	Not Available	766	Open in IMG/M
3300016294\|Ga0182041_10024958	All Organisms → cellular organisms → Bacteria	3729	Open in IMG/M
3300016294\|Ga0182041_10396244	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300016294\|Ga0182041_11547752	Not Available	611	Open in IMG/M
3300016294\|Ga0182041_11794807	Not Available	569	Open in IMG/M
3300016294\|Ga0182041_12303502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	504	Open in IMG/M
3300016319\|Ga0182033_10463980	Not Available	1082	Open in IMG/M
3300016341\|Ga0182035_10837137	Not Available	809	Open in IMG/M
3300016341\|Ga0182035_11237477	Not Available	667	Open in IMG/M
3300016341\|Ga0182035_11920988	Not Available	537	Open in IMG/M
3300016357\|Ga0182032_10460556	Not Available	1039	Open in IMG/M
3300016357\|Ga0182032_11318771	Not Available	623	Open in IMG/M
3300016371\|Ga0182034_11324850	Not Available	628	Open in IMG/M
3300016387\|Ga0182040_10697188	Not Available	830	Open in IMG/M
3300016404\|Ga0182037_10435457	Not Available	1087	Open in IMG/M
3300016404\|Ga0182037_11380981	Not Available	622	Open in IMG/M
3300016404\|Ga0182037_11731332	Not Available	557	Open in IMG/M
3300016422\|Ga0182039_10407123	Not Available	1156	Open in IMG/M
3300016422\|Ga0182039_10880675	Not Available	798	Open in IMG/M
3300016422\|Ga0182039_11378096	Not Available	640	Open in IMG/M
3300016445\|Ga0182038_10324347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300016445\|Ga0182038_11802776	Not Available	552	Open in IMG/M
3300016445\|Ga0182038_11964810	Not Available	529	Open in IMG/M
3300017822\|Ga0187802_10008836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3196	Open in IMG/M
3300017822\|Ga0187802_10319190	Not Available	607	Open in IMG/M
3300017924\|Ga0187820_1302512	Not Available	527	Open in IMG/M
3300017930\|Ga0187825_10415454	Not Available	519	Open in IMG/M
3300017932\|Ga0187814_10258070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	662	Open in IMG/M
3300017943\|Ga0187819_10017400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4145	Open in IMG/M
3300017955\|Ga0187817_10000742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14619	Open in IMG/M
3300017955\|Ga0187817_10857876	Not Available	580	Open in IMG/M
3300017993\|Ga0187823_10123891	Not Available	794	Open in IMG/M
3300017993\|Ga0187823_10315875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	547	Open in IMG/M
3300018001\|Ga0187815_10124080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1091	Open in IMG/M
3300018001\|Ga0187815_10403666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	582	Open in IMG/M
3300021168\|Ga0210406_10794189	Not Available	721	Open in IMG/M
3300021560\|Ga0126371_11555340	Not Available	788	Open in IMG/M
3300021560\|Ga0126371_13607885	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_13697403	Not Available	516	Open in IMG/M
3300025905\|Ga0207685_10322117	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300025915\|Ga0207693_11291114	Not Available	546	Open in IMG/M
3300026898\|Ga0207788_1005296	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300026909\|Ga0207858_1014816	Not Available	759	Open in IMG/M
3300026990\|Ga0207824_1015781	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300027010\|Ga0207839_1015137	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300027090\|Ga0208604_1020418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300027090\|Ga0208604_1029390	Not Available	517	Open in IMG/M
3300031057\|Ga0170834_101209929	Not Available	569	Open in IMG/M
3300031668\|Ga0318542_10425192	Not Available	687	Open in IMG/M
3300031680\|Ga0318574_10554885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300031681\|Ga0318572_10904383	Not Available	524	Open in IMG/M
3300031736\|Ga0318501_10366827	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300031744\|Ga0306918_10881838	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031747\|Ga0318502_10683843	Not Available	620	Open in IMG/M
3300031747\|Ga0318502_10953449	Not Available	522	Open in IMG/M
3300031753\|Ga0307477_10146042	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300031754\|Ga0307475_10856506	Not Available	719	Open in IMG/M
3300031768\|Ga0318509_10224415	Not Available	1047	Open in IMG/M
3300031768\|Ga0318509_10367023	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031777\|Ga0318543_10243185	Not Available	802	Open in IMG/M
3300031781\|Ga0318547_10047443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2299	Open in IMG/M
3300031795\|Ga0318557_10229104	Not Available	850	Open in IMG/M
3300031846\|Ga0318512_10215004	Not Available	943	Open in IMG/M
3300031896\|Ga0318551_10800625	Not Available	548	Open in IMG/M
3300031910\|Ga0306923_10270536	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300031910\|Ga0306923_10496726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300031941\|Ga0310912_11380996	Not Available	532	Open in IMG/M
3300031942\|Ga0310916_10655316	Not Available	890	Open in IMG/M
3300031942\|Ga0310916_11737369	Not Available	504	Open in IMG/M
3300031945\|Ga0310913_10936950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300031946\|Ga0310910_10301326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1261	Open in IMG/M
3300031954\|Ga0306926_10609197	Not Available	1333	Open in IMG/M
3300031959\|Ga0318530_10351127	Not Available	611	Open in IMG/M
3300032001\|Ga0306922_10198825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2151	Open in IMG/M
3300032001\|Ga0306922_10335448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1622	Open in IMG/M
3300032035\|Ga0310911_10145327	Not Available	1331	Open in IMG/M
3300032043\|Ga0318556_10508695	Not Available	630	Open in IMG/M
3300032051\|Ga0318532_10005381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3725	Open in IMG/M
3300032055\|Ga0318575_10683999	Not Available	519	Open in IMG/M
3300032059\|Ga0318533_10591540	Not Available	814	Open in IMG/M
3300032059\|Ga0318533_11075508	Not Available	589	Open in IMG/M
3300032076\|Ga0306924_10199665	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300032076\|Ga0306924_11978685	Not Available	601	Open in IMG/M
3300032076\|Ga0306924_11990242	Not Available	599	Open in IMG/M
3300032261\|Ga0306920_100278497	Not Available	2493	Open in IMG/M
3300032261\|Ga0306920_100307500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	2360	Open in IMG/M
3300032261\|Ga0306920_100408344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2019	Open in IMG/M
3300032261\|Ga0306920_102921315	Not Available	647	Open in IMG/M
3300033289\|Ga0310914_10886522	Not Available	791	Open in IMG/M
3300033289\|Ga0310914_11305170	Not Available	628	Open in IMG/M
3300033289\|Ga0310914_11438381	Not Available	592	Open in IMG/M
3300033289\|Ga0310914_11813471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300033290\|Ga0318519_10494628	Not Available	736	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.98%
Aquatic	Environmental → Aquatic	11.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.98%
Freshwater	Environmental → Aquatic → Freshwater	10.17%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1021276643	3300005332	Tropical Forest Soil	PSMLFREFAAECMELAQTTSSPEKHALYVKMACVWFQMAQRWEKKS*
Ga0066388_1033696551	3300005332	Tropical Forest Soil	EFAAECIELAQTNTSPEKRALYMKMAAMWHQMAQRWEKKS*
Ga0066903_1008733322	3300005764	Tropical Forest Soil	LSLPTLFREFAAECMELAQTTPTPEKRALYMKMASLWHQMAQRWEKKG*
Ga0066903_1013279693	3300005764	Tropical Forest Soil	MLFREFAAECMELAQTTPEKRTLYMKMASVWHQMALRWEKKG*
Ga0066903_1028602643	3300005764	Tropical Forest Soil	PTLFREFAAECMELAQTTPTPEKRLLYLKMASVWHQMAQRSEKKG*
Ga0066903_1031584571	3300005764	Tropical Forest Soil	TLFREFAAECVELAQTNPSPEKRALYMQMSSMWHQIAQRWEKKDQPS*
Ga0066903_1033352122	3300005764	Tropical Forest Soil	FREFAAECIELAQTASSPAKHALYTRMASAWHQLAQRWEKRSQTSP*
Ga0066903_1052869973	3300005764	Tropical Forest Soil	EPSTLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP*
Ga0066903_1077975502	3300005764	Tropical Forest Soil	EPSTLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMVQRWEKKASPSVAP*
Ga0075017_1002421824	3300006059	Watersheds	MLFREFAAECMELAQTASSPEKHVMYLKMASVWFQMAQRWEKK*
Ga0126382_106506921	3300010047	Tropical Forest Soil	MSPRANPSTLAREFAAECMELAENTLSPEKRAIYLKMASVWHQMAIRS
Ga0126373_101521406	3300010048	Tropical Forest Soil	EFAAECAQLAQATPTPEKRGLYLRMASVWHQMALRWEKKS*
Ga0126373_112068072	3300010048	Tropical Forest Soil	AAECTELAQTIPEKRALYLIMASVWHQMAQRWEKKN*
Ga0126370_112033561	3300010358	Tropical Forest Soil	DPSTLFREFAAECAELAQGSPSPEKRTLYLKMASVWHQMALRWERKG*
Ga0126376_108741842	3300010359	Tropical Forest Soil	LVPSTLFREFAAECMELAQTTPTPEKRALYLKMASVMHQMAQRWEKKG*
Ga0126372_117695591	3300010360	Tropical Forest Soil	DCEPSTLFREFAAECAQLAQTAPTHEKRTLYMRMASVWHQMALRWEEKG*
Ga0126372_122117011	3300010360	Tropical Forest Soil	AELAQGTPSLEKRTLYLKMASVWHQMAFRWERKG*
Ga0126379_112436451	3300010366	Tropical Forest Soil	AECMELAKTKSSPEKRALYLKMASVWHQMAQRWEKKSQLSP*
Ga0126379_118643231	3300010366	Tropical Forest Soil	EPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG*
Ga0126379_124988781	3300010366	Tropical Forest Soil	REFATECLELAQTTSTPEKRRLFLKMASVWHQMAPRWERRS*
Ga0126381_1045759271	3300010376	Tropical Forest Soil	PTLFREFAAECMGLAQTTPTPEKRALYLKMASVWHQMAQRLEKPSIG*
Ga0126381_1049756061	3300010376	Tropical Forest Soil	IELAQTASSPEKHALYLKMARVWFQMAQRWEKKS*
Ga0126369_132220061	3300012971	Tropical Forest Soil	LFREFAAECMELAQATPTPQKRALYVRMASVWYQMALRWEKKG*
Ga0182036_108051461	3300016270	Soil	LFREFAAECMELAQTTPTPEKRALYLKMARVWHQMAQRSEKKGRGVDRRRTY
Ga0182041_100249581	3300016294	Soil	ECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0182041_103962443	3300016294	Soil	EPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0182041_107447551	3300016294	Soil	REFASECTQLAQTAPTPEKRALYMRMASVWHQMAVRWEKKG
Ga0182041_115477522	3300016294	Soil	LFREFAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182041_117948071	3300016294	Soil	ECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0182041_123035022	3300016294	Soil	CEPSTLFREFAAECIELAQTVSSPSKHALYMKMASVWHQMAQRWENKNQPSP
Ga0182033_104639802	3300016319	Soil	FAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182035_108371375	3300016341	Soil	FAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0182035_112374771	3300016341	Soil	EPSMLFREFAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182035_119209882	3300016341	Soil	ELSQTKSSPEKRALYLKMASVWHQMEKRWEKKRQPSP
Ga0182032_104605563	3300016357	Soil	REFAAECAELAQDTPSSEKRTLYLKMACVWHQMALRWERKG
Ga0182032_113187711	3300016357	Soil	QFACECVELAQSTPLPEKRALYMKMASVWHQMALRWEKKG
Ga0182034_113248501	3300016371	Soil	REFAAECIELAQTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0182040_106971881	3300016387	Soil	FAAECMELAKTKSSPEKRALYLKMASVWHQMAQRWETKSQPSP
Ga0182037_104354573	3300016404	Soil	FREFAAECMELAQTASSPEKHALYLKMASVWFQMAQRWEKKS
Ga0182037_113809811	3300016404	Soil	GCQPSTLFREFAAECIELARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0182037_117313321	3300016404	Soil	FAAECAELARDTPSSEKRTLYLKMASVWHHMALRWERKG
Ga0182039_104071233	3300016422	Soil	FREFAAECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0182039_108806752	3300016422	Soil	LFRQFACECVELAQSTPLPEKRALYMKMASVWHQMALRWEKKG
Ga0182039_113780962	3300016422	Soil	FASECVELAQSTPLPEKRTLYMKMASVWHQMALRWETKG
Ga0182038_103243471	3300016445	Soil	LFREFAAECIELAQTNPSPGKRALYMKMAGMWHQMAQRWETKG
Ga0182038_118027761	3300016445	Soil	ECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQASP
Ga0182038_119648101	3300016445	Soil	STLFREFAAECMELAKTKSSPEKRALYLKMASVWHQMAQRWETKSQPSP
Ga0187802_100088361	3300017822	Freshwater Sediment	REFAAECMELAQTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0187802_103191902	3300017822	Freshwater Sediment	FAAECMELAQTNPSPKKRALYLKMASVWHQMAQRWEKKS
Ga0187820_13025121	3300017924	Freshwater Sediment	AECMELAQTASSPEKHVMYLKMASVWFQMAQRWEKK
Ga0187825_104154542	3300017930	Freshwater Sediment	FREFAAECMELAQTNPSHEKRALYLKMASVWHHMAQRWEKKG
Ga0187814_102580701	3300017932	Freshwater Sediment	REFAAECMELAQTIPSHEKRALYLKMASVWHHTAQRWEKKG
Ga0187819_100174006	3300017943	Freshwater Sediment	NPPALFREFAAECMELARTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0187817_100007421	3300017955	Freshwater Sediment	REFAAECMELAQTVPSHEKRALYLKMASVWHQMARRWEKKS
Ga0187817_108578761	3300017955	Freshwater Sediment	TLFREFAAECMELAQTVPSHEKRALYLKIASVWHQMAQRWEKKS
Ga0187823_101238912	3300017993	Freshwater Sediment	LFREFAAECMELAQTVPSHEKRALYLKMASVWHQMARRWEKKS
Ga0187823_103158751	3300017993	Freshwater Sediment	FREFAAECTELAQTIPSHEKRALYVEMASVWYHMAQRWEKKV
Ga0187815_101240802	3300018001	Freshwater Sediment	LFREFAAECMELAQTVPSHEKRALYLKIASVWHQMAQRWEKKS
Ga0187815_104036661	3300018001	Freshwater Sediment	TLFREFAAECMELAQTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0210406_107941891	3300021168	Soil	EGCQPSTLFRQFAAECIELAQTASLPEKHALYLKMASVWHQMAQRWEKKN
Ga0126371_115553403	3300021560	Tropical Forest Soil	EPSTLFREFAAECMELAQTTPTPEKRALYMKMASLWHQMAQRWEKKS
Ga0126371_136078851	3300021560	Tropical Forest Soil	RDFAAECIELAQTASSNEKRALYTKMASVWHQMAQRWEKKSQPSP
Ga0126371_136974031	3300021560	Tropical Forest Soil	DREPSTVFREFAAECTQLAKAAPTPDKRAHLRMASVWHQMAVRWEKKG
Ga0207685_103221171	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LFREFAAECMELAQTVSSPEKHALYLKMASVWHRMAQRWEKKS
Ga0207693_112911141	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	EPSTLFRQFAAECMELAQTASSPEKHALYLKMASVWFQMAQRWEKVSD
Ga0207788_10052962	3300026898	Tropical Forest Soil	LNPRTLFREFAAECMELAQTTPTPEKRLLYLKMARLWHQIAQRWEKKG
Ga0207858_10148163	3300026909	Tropical Forest Soil	PSTLFREFAAECMELAQTAPTPKKRTLYMRMASVWHQMALRWEKKNSPSVTP
Ga0207824_10157811	3300026990	Tropical Forest Soil	SILFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0207839_10151372	3300027010	Tropical Forest Soil	FAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0208604_10204182	3300027090	Forest Soil	EFAAECMELAQTIPSHEKRALYLKMASVWHLTAQRWEKKG
Ga0208604_10293902	3300027090	Forest Soil	PPTLFREFAAECMELAQTIPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0170834_1012099291	3300031057	Forest Soil	PPTLFREFAAECMELAQTNPSHEKRALYLKMASVWHHMAQRWEKK
Ga0318542_104251922	3300031668	Soil	CMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318574_105548852	3300031680	Soil	YKDREPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0318572_109043832	3300031681	Soil	TLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0318501_103668271	3300031736	Soil	ILFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0306918_108818382	3300031744	Soil	DVNPPTLFRDFAADCMELEQSTPLPEKRRLYVKMASVWHQMALRWEKKD
Ga0318502_106838431	3300031747	Soil	TLFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0318502_109534491	3300031747	Soil	FAAECAELAQDTPSSEKRTLYLKMASVWHHMALRRERKG
Ga0307477_101460424	3300031753	Hardwood Forest Soil	MLFREFAAECMELAQTVSSPEKRALYMKMASVWFQM
Ga0307475_108565061	3300031754	Hardwood Forest Soil	LFREFAAECIGLARTASSPEKHTLYLKMASVWHRMAQRWEKKS
Ga0318509_102244153	3300031768	Soil	EPSTLFREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318509_103670231	3300031768	Soil	REFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318543_102431851	3300031777	Soil	MLFREFAAECAELAQGTSSPEKRTLYLKMASVWHQMALRWEKKG
Ga0318547_100474431	3300031781	Soil	TLFREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318557_102291043	3300031795	Soil	AAECMELAQTAPSPEKHALYMKMASAWFQMARRWEKKN
Ga0318512_102150041	3300031846	Soil	MLFREFAAECMELAQTTSSPEKHALYVKMACVWFQMAQRWEKKS
Ga0306919_102768642	3300031879	Soil	ASECVELAQSAPLPEKRSLYMKMASVWHQMAVRWEKKG
Ga0318551_108006252	3300031896	Soil	CMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0306923_102705363	3300031910	Soil	EFAAECTQLAQTAPTYEKRTLYMRMASVWHQMALRWEKKG
Ga0306923_104967261	3300031910	Soil	WRATKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0310912_113809962	3300031941	Soil	EDRDPPTLFREFAAECMELAQTTPTPKKRTLYMKMASVWHKIAQRWEKK
Ga0310916_106553163	3300031942	Soil	VDASTLFRQFACECVELAQSTPLPEKRTLYMKMASVWHQMALRWEKKG
Ga0310916_117373691	3300031942	Soil	REFGAECIELAQTASSPEKHTLYLKMASVWHQMAQRWEERS
Ga0310913_109369503	3300031945	Soil	LAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0310910_103013261	3300031946	Soil	MSAFGTPTLFREFAAECMELVQTTSLPEKRALYLKMASMWFQMAQRWERG
Ga0306926_106091973	3300031954	Soil	TLFREFAAECIELARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0318530_103511271	3300031959	Soil	TLFRDFAAECMDLAQTAPTPKKRTLYMRMASVWHQMALRWEKKG
Ga0306922_101988251	3300032001	Soil	PALFREFAAECMDLAQTAPTPKKRTLYMKMASVWHQMALRWEKKS
Ga0306922_103354481	3300032001	Soil	DPSTLFREFAAECAELARDTPSSEKRTLYLKMASVWHHMALRRERKG
Ga0310911_101453271	3300032035	Soil	FAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318556_105086951	3300032043	Soil	FREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318532_100053817	3300032051	Soil	CEPSTLFREFAAECMELAQTTSTPEKRTLYMKMASVWHQMALRWEKKG
Ga0318575_106839992	3300032055	Soil	AAECAELAQGTSSPEKRTLYLKMASVWHQMALRWEKKG
Ga0318533_105915401	3300032059	Soil	ELAQTAPTPKKRTLYMKMASVWHQTALRWEKKNGGWFY
Ga0318533_110755081	3300032059	Soil	EFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0306924_101996653	3300032076	Soil	EPSTLFREFAAECAQLAQTAPTYEKRTLYMRMASVWHQMALRWEKKG
Ga0306924_119786852	3300032076	Soil	EDCRPSTLFREFAAECIDLARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0306924_119902421	3300032076	Soil	VNPPTLFRDFAAECMELAQSTPLPEKRRLYVKMASVWHQMALRWEKKD
Ga0306920_1002784975	3300032261	Soil	DPSTLFREFAAECAELARDTPSSEKRTLYLKMACVWHQMALRWERKG
Ga0306920_1003075004	3300032261	Soil	ECMELAQTTPTPKKRTLYMKMASVWHKIAQRWEKK
Ga0306920_1004083444	3300032261	Soil	REFAAECIELAQTASSPEKHALYMKMASVWHQIAQRWEKKS
Ga0306920_1029213152	3300032261	Soil	SMLFREFAAECMELAQTTSSPEKHALYLKMASVWFQMAQRWEKKS
Ga0310914_108865221	3300033289	Soil	LFRQFASECVELAQSTPLPEKRSLYMKMASVWHQMAVRWEKKG
Ga0310914_113051701	3300033289	Soil	EPSTLFREFAAECTQLAKTAPTPDKRALYLRMASVWHQMAVRWEMKREADEWR
Ga0310914_114383811	3300033289	Soil	FASECVELAHSTPLPEKRTLYMKMASVWHQMALRWEKKG
Ga0310914_118134711	3300033289	Soil	ECIELAQTASSPEKRALYLKMASVWHQMAQRWEKKG
Ga0318519_104946281	3300033290	Soil	YEGREPSTLFRDFAAECMDLAQTAATPKKRTLYMRMASVWHKIALRWEKKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences