Metagenome / Metatranscriptome Family F075674

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075674
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	44 residues
Representative Sequence	FLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNRGE
Number of Associated Samples	8
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	27.43 %
% of genes near scaffold ends (potentially truncated)	83.90 %
% of genes from short scaffolds (< 2000 bps)	78.81 %
Associated GOLD sequencing projects	8
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (75.424 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (99.153 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus (99.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00001	7tm_1	1.69
PF01490	Aa_trans	0.85
PF09748	Med10	0.85
PF12474	PKK	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.85
COG0814	Amino acid permease	Amino acid transport and metabolism [E]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
All Organisms	root	All Organisms	24.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
cellular organisms	root	All Organisms → cellular organisms	24.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	24.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	23.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	20.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	19.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Cnidaria	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria	18.64 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Anthozoa	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	18.64 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Hexacorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	17.80 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	0.85 %
Octocorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Scleractinia	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	16.95 %
Lophotrochozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa	0.85 %
Actiniaria	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria	0.85 %
Malacalcyonacea	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	6.78 %
Faviina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina	5.08 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.85 %
Plexauridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea → Plexauridae	0.85 %
Edwardsiidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Merulinidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae	5.08 %
Pocilloporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	4.24 %
Acroporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae	0.85 %
Paramuricea	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea → Plexauridae → Paramuricea	0.85 %
Nematostella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella	0.85 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Orbicella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella	5.08 %
Stylophora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora	1.69 %
Paramuricea clavata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea → Plexauridae → Paramuricea → Paramuricea clavata	0.85 %
Pocillopora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora	0.85 %
Nematostella vectensis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis	0.85 %
Acropora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	0.85 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.42 %
Orbicella faveolata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	5.08 %
Stylophora pistillata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	1.69 %
Pocillopora damicornis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	0.85 %
Acropora millepora	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	0.85 %
Paramuricea clavata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea → Plexauridae → Paramuricea → Paramuricea clavata	0.85 %
Nematostella vectensis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis	0.85 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003641\|BLZD_1007626	Not Available	640	Open in IMG/M
3300008014\|Ga0099814_1003932	Not Available	769	Open in IMG/M
3300008014\|Ga0099814_1016979	Not Available	562	Open in IMG/M
3300008014\|Ga0099814_1057205	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	2959	Open in IMG/M
3300008014\|Ga0099814_1060935	Not Available	1496	Open in IMG/M
3300008014\|Ga0099814_1086195	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	739	Open in IMG/M
3300008014\|Ga0099814_1096156	Not Available	601	Open in IMG/M
3300008014\|Ga0099814_1129466	All Organisms → cellular organisms → Eukaryota	1867	Open in IMG/M
3300008014\|Ga0099814_1192500	Not Available	980	Open in IMG/M
3300008014\|Ga0099814_1207974	Not Available	599	Open in IMG/M
3300008014\|Ga0099814_1237756	Not Available	1860	Open in IMG/M
3300008014\|Ga0099814_1238733	Not Available	1548	Open in IMG/M
3300008014\|Ga0099814_1241467	Not Available	2134	Open in IMG/M
3300008014\|Ga0099814_1244275	Not Available	917	Open in IMG/M
3300008014\|Ga0099814_1455310	Not Available	547	Open in IMG/M
3300008014\|Ga0099814_1457773	Not Available	673	Open in IMG/M
3300008014\|Ga0099814_1473511	Not Available	806	Open in IMG/M
3300008029\|Ga0099812_1021508	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	2198	Open in IMG/M
3300008029\|Ga0099812_1059715	Not Available	690	Open in IMG/M
3300008029\|Ga0099812_1069471	Not Available	1142	Open in IMG/M
3300008029\|Ga0099812_1072170	Not Available	684	Open in IMG/M
3300008029\|Ga0099812_1154282	Not Available	877	Open in IMG/M
3300008029\|Ga0099812_1402056	Not Available	900	Open in IMG/M
3300008032\|Ga0099815_1001434	Not Available	713	Open in IMG/M
3300008032\|Ga0099815_1041749	All Organisms → cellular organisms → Eukaryota → Opisthokonta	601	Open in IMG/M
3300008032\|Ga0099815_1042272	Not Available	1036	Open in IMG/M
3300008032\|Ga0099815_1058609	Not Available	763	Open in IMG/M
3300008032\|Ga0099815_1067754	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Octocorallia → Malacalcyonacea → Plexauridae → Paramuricea → Paramuricea clavata	1416	Open in IMG/M
3300008032\|Ga0099815_1083195	Not Available	760	Open in IMG/M
3300008032\|Ga0099815_1145568	Not Available	617	Open in IMG/M
3300008032\|Ga0099815_1148984	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	993	Open in IMG/M
3300008032\|Ga0099815_1157324	Not Available	517	Open in IMG/M
3300008032\|Ga0099815_1193311	Not Available	614	Open in IMG/M
3300008032\|Ga0099815_1199491	Not Available	1544	Open in IMG/M
3300008032\|Ga0099815_1235185	Not Available	2900	Open in IMG/M
3300008032\|Ga0099815_1282911	Not Available	935	Open in IMG/M
3300008034\|Ga0099810_1015877	Not Available	576	Open in IMG/M
3300008034\|Ga0099810_1018460	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	1761	Open in IMG/M
3300008034\|Ga0099810_1022297	Not Available	860	Open in IMG/M
3300008034\|Ga0099810_1051203	Not Available	528	Open in IMG/M
3300008034\|Ga0099810_1084851	All Organisms → cellular organisms → Eukaryota → Opisthokonta	597	Open in IMG/M
3300008034\|Ga0099810_1087523	Not Available	1201	Open in IMG/M
3300008034\|Ga0099810_1093006	Not Available	619	Open in IMG/M
3300008034\|Ga0099810_1104277	Not Available	550	Open in IMG/M
3300008034\|Ga0099810_1129395	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1406	Open in IMG/M
3300008034\|Ga0099810_1168545	Not Available	801	Open in IMG/M
3300008034\|Ga0099810_1184184	Not Available	1125	Open in IMG/M
3300008034\|Ga0099810_1210152	Not Available	751	Open in IMG/M
3300008034\|Ga0099810_1284143	Not Available	745	Open in IMG/M
3300008034\|Ga0099810_1290736	Not Available	793	Open in IMG/M
3300008034\|Ga0099810_1308493	Not Available	967	Open in IMG/M
3300008034\|Ga0099810_1310372	Not Available	1071	Open in IMG/M
3300008034\|Ga0099810_1356372	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1073	Open in IMG/M
3300008034\|Ga0099810_1546639	Not Available	829	Open in IMG/M
3300008034\|Ga0099810_1570389	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	680	Open in IMG/M
3300008036\|Ga0099811_1203577	Not Available	1355	Open in IMG/M
3300008036\|Ga0099811_1240569	Not Available	641	Open in IMG/M
3300008036\|Ga0099811_1397163	Not Available	567	Open in IMG/M
3300008046\|Ga0099813_1012752	Not Available	818	Open in IMG/M
3300008046\|Ga0099813_1026499	Not Available	579	Open in IMG/M
3300008046\|Ga0099813_1042673	Not Available	1386	Open in IMG/M
3300008046\|Ga0099813_1053931	Not Available	911	Open in IMG/M
3300008046\|Ga0099813_1101673	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1124	Open in IMG/M
3300008046\|Ga0099813_1117291	Not Available	1912	Open in IMG/M
3300010031\|Ga0126337_10000873	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	16877	Open in IMG/M
3300010031\|Ga0126337_10006586	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	7778	Open in IMG/M
3300010031\|Ga0126337_10007053	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	7541	Open in IMG/M
3300010031\|Ga0126337_10018097	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis	4677	Open in IMG/M
3300010031\|Ga0126337_10020331	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	4410	Open in IMG/M
3300010031\|Ga0126337_10020612	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	4376	Open in IMG/M
3300010031\|Ga0126337_10022220	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	4211	Open in IMG/M
3300010031\|Ga0126337_10023275	Not Available	4119	Open in IMG/M
3300010031\|Ga0126337_10026084	Not Available	3892	Open in IMG/M
3300010031\|Ga0126337_10028049	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3751	Open in IMG/M
3300010031\|Ga0126337_10032838	Not Available	3471	Open in IMG/M
3300010031\|Ga0126337_10037342	Not Available	3263	Open in IMG/M
3300010031\|Ga0126337_10044459	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	2999	Open in IMG/M
3300010031\|Ga0126337_10078468	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	2267	Open in IMG/M
3300010031\|Ga0126337_10094514	Not Available	2058	Open in IMG/M
3300010031\|Ga0126337_10099656	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	2002	Open in IMG/M
3300010031\|Ga0126337_10104814	Not Available	1948	Open in IMG/M
3300010031\|Ga0126337_10113106	Not Available	1869	Open in IMG/M
3300010031\|Ga0126337_10163430	Not Available	1516	Open in IMG/M
3300010031\|Ga0126337_10184858	Not Available	1405	Open in IMG/M
3300010031\|Ga0126337_10189124	Not Available	1385	Open in IMG/M
3300010031\|Ga0126337_10195118	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	1358	Open in IMG/M
3300010031\|Ga0126337_10215859	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1271	Open in IMG/M
3300010031\|Ga0126337_10216557	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	1268	Open in IMG/M
3300010031\|Ga0126337_10231705	Not Available	1212	Open in IMG/M
3300010031\|Ga0126337_10240958	Not Available	1179	Open in IMG/M
3300010031\|Ga0126337_10271591	Not Available	1081	Open in IMG/M
3300010031\|Ga0126337_10290164	Not Available	1029	Open in IMG/M
3300010031\|Ga0126337_10308147	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	982	Open in IMG/M
3300010031\|Ga0126337_10312608	Not Available	971	Open in IMG/M
3300010031\|Ga0126337_10318823	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	955	Open in IMG/M
3300010031\|Ga0126337_10347425	Not Available	891	Open in IMG/M
3300010031\|Ga0126337_10348019	Not Available	889	Open in IMG/M
3300010031\|Ga0126337_10356125	Not Available	873	Open in IMG/M
3300010031\|Ga0126337_10356782	Not Available	871	Open in IMG/M
3300010031\|Ga0126337_10363797	Not Available	857	Open in IMG/M
3300010031\|Ga0126337_10406147	Not Available	778	Open in IMG/M
3300010031\|Ga0126337_10418206	Not Available	758	Open in IMG/M
3300010031\|Ga0126337_10439084	Not Available	725	Open in IMG/M
3300010031\|Ga0126337_10440932	Not Available	723	Open in IMG/M
3300010031\|Ga0126337_10472898	Not Available	676	Open in IMG/M
3300010031\|Ga0126337_10538760	Not Available	595	Open in IMG/M
3300010031\|Ga0126337_10546953	Not Available	586	Open in IMG/M
3300010031\|Ga0126337_10573163	Not Available	558	Open in IMG/M
3300010031\|Ga0126337_10576982	Not Available	554	Open in IMG/M
3300010031\|Ga0126337_10587278	Not Available	544	Open in IMG/M
3300010031\|Ga0126337_10591241	Not Available	540	Open in IMG/M
3300010031\|Ga0126337_10603209	Not Available	529	Open in IMG/M
3300010031\|Ga0126337_10617298	Not Available	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	100.00%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	100.00%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	99.15%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	99.15%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	99.15%
Cnidaria	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003641	Belize Diploria	Host-Associated	Open in IMG/M
3300008014	Coral microbial communities from Puerto Morelos, Mexico - Diporia T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008029	Coral microbial communities from Puerto Morelos, Mexico - Diploria C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008032	Coral microbial communities from Puerto Morelos, Mexico - Diporia T C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008034	Coral microbial communities from Puerto Morelos, Mexico - Diploria C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008036	Coral microbial communities from Puerto Morelos, Mexico - Diploria C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008046	Coral microbial communities from Puerto Morelos, Mexico - Diporia T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010031	Coral microbial communities from La Bocana,Puerto Morelos, Mexico - Diploria C A metagenome	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BLZD_10076262	3300003641	Cnidaria	LSRFGLKTGIDFEHFGLKLGMVIGGTFTKVYKLIFLPSNRGE*
Ga0099814_10039322	3300008014	Coral	TGIDFEHFGLILGMVIGGTFTKAYNLIFLPIDRGE*
Ga0099814_10169791	3300008014	Coral	QRVWFLSRFGLKTGVDFKHFGLKMGMVNGGMFTEAYNLIFLPSNRGE*
Ga0099814_10572051	3300008014	Coral	KMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHRGE*
Ga0099814_10609352	3300008014	Coral	MVFEPGLKMGIDFENFGLKLGMVVGGTFTKAYKLIFLLSNQGE*
Ga0099814_10861951	3300008014	Coral	PQRVWFLSRFGLKTGKDFEYFGLKLGMVIGGTFMKAYKLIFLPSNRGK*
Ga0099814_10961561	3300008014	Coral	FLSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHWGE*
Ga0099814_11294662	3300008014	Coral	FGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHRGE*
Ga0099814_11925002	3300008014	Coral	RVWFLSRFGLKTGIDFEHFGLKLGMVIEGTFTKVYKLIFLPSNRR*
Ga0099814_12079741	3300008014	Coral	KTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099814_12377562	3300008014	Coral	MSRFGLKTGIDFEQFGLKLGMVIGETFTKAYKLIFLPSIRDE*
Ga0099814_12387331	3300008014	Coral	MCHPKRVWFLSRFGLKTGVDFKHFGLKMGMVNGGTFPEAYKLIFLPRNQGE*
Ga0099814_12414671	3300008014	Coral	MCRPKGYGFQSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRG
Ga0099814_12442753	3300008014	Coral	YRYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPTHRGE*
Ga0099814_14553101	3300008014	Coral	VPPQRVWFFSRFGLKTGIEFEHFGLKLGMVIGGTFTKAYKLIFLP
Ga0099814_14577731	3300008014	Coral	VYRYVPSQRVWFLSCFGLNTGIDFERFGMVIGGTFTKAYNLVFLPSDRGE*
Ga0099814_14735111	3300008014	Coral	FGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLLSHRGE*
Ga0099812_10215081	3300008029	Coral	YVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGKFTKAYKLIFLPSNQGE*
Ga0099812_10597151	3300008029	Coral	YVPPQRVWFLSRFGLKMGIDFEHFGLKLGMVIGRTFTKAYKIIFLPSNRGK*
Ga0099812_10694711	3300008029	Coral	LKTGIDFEHFGLKLGMVIRGTFMKAYKLIFLPSNRGE*
Ga0099812_10721701	3300008029	Coral	MVFEPGLKMGINFENFGLKLGMVVGGTFTKAYKLIFLLSNQGEKQT*
Ga0099812_11542821	3300008029	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIFLLRNRGE*
Ga0099812_14020561	3300008029	Coral	VPPQRVWFLSRFGLKSGIDFENFGLKLGMIIGGTFTKAYKLIFLPRHRGE*
Ga0099812_14233661	3300008029	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLNLGMVIGRTFTKAYKIIFVPSNQGE*
Ga0099815_10014341	3300008032	Coral	VWFLSRFGLKTGIDFEHFGLILGMVIGGTFTKPYNLIFLPIDRGE*
Ga0099815_10417491	3300008032	Coral	YRYVPPQRVWFSSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099815_10422721	3300008032	Coral	WFLSRFGLKTGIDFEHFGLKLGMVIGRTFTKAYKLIFLPSNQGE*
Ga0099815_10586091	3300008032	Coral	YRYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRGE*
Ga0099815_10677542	3300008032	Coral	TGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099815_10831951	3300008032	Coral	RYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIFLLRNRGE*
Ga0099815_11455681	3300008032	Coral	FGLKPGIDFEHFGLKLGMVIGVTFTKAYKLIVLPCNRGE*
Ga0099815_11489843	3300008032	Coral	FLSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFFPSHRGE*
Ga0099815_11493241	3300008032	Coral	MSRFGLNTGIDFKHCDLKLGMAIGGTFTKAYKLIFL
Ga0099815_11573241	3300008032	Coral	LSRFGLKTGIDFEHFGLKLGMVIEGTFTKVYKLIFL
Ga0099815_11894521	3300008032	Coral	GLKTGIDFKHFGLKLGMVIGGTFTKAYKLIFLPSNRGE*
Ga0099815_11933112	3300008032	Coral	PPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYNLIFLPCNRGE*
Ga0099815_11994911	3300008032	Coral	LSRFGLKLRMGIDFEHFGLKLGMVIGGTFTKAYKLI
Ga0099815_12351851	3300008032	Coral	VPPQRIWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPS
Ga0099815_12829111	3300008032	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIEGTFTKVYKLIFL
Ga0099810_10158772	3300008034	Coral	RYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVVEGTFTKAY*
Ga0099810_10184601	3300008034	Coral	RVWFLNRFGLQMGIDFEHFGLRLGMVIGGTFTRAYNLIFLPSDRGE*
Ga0099810_10222972	3300008034	Coral	QRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYQVIFLPSNQGE*
Ga0099810_10512031	3300008034	Coral	YVPPQRVWFLSRFGLKTGIDVEHFGQKLGMVIGGAFTKAYKFIFLPSNQVE*
Ga0099810_10848511	3300008034	Coral	SRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099810_10875232	3300008034	Coral	QRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099810_10930061	3300008034	Coral	VSPQRVWFLSRFGLKTGIDFEHFGLKLGMVIEGTFTKAYK
Ga0099810_11042771	3300008034	Coral	VAPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLP
Ga0099810_11293952	3300008034	Coral	FLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099810_11685451	3300008034	Coral	VYRYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIFLLRNRGE*
Ga0099810_11841842	3300008034	Coral	VLPQRVWFLSRFALKTGIDFEHFGLKLGMVIGGTFTKVYKLIFLPSNRG
Ga0099810_12101522	3300008034	Coral	WFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKTYKLIFLPSNRGE*
Ga0099810_12841431	3300008034	Coral	MVFEPFGLKTGVDFKHFGLKMGMVNGETFPEAYKLIFLPSNQGE*
Ga0099810_12907361	3300008034	Coral	SRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKIIFLPSNRGE*
Ga0099810_13084931	3300008034	Coral	FLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNRGE*
Ga0099810_13103721	3300008034	Coral	VPPQRVLFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSN
Ga0099810_13563721	3300008034	Coral	LSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFL
Ga0099810_15466392	3300008034	Coral	VWFLSRFGPKTGTDFEHFGLKLGVVIGGTFTKANKIIFLPSNRGE*
Ga0099810_15703891	3300008034	Coral	VPPQRVWFLSRFCLETDIDFEHFGLKLGMVIEGTFTKAYKLIF
Ga0099811_10370721	3300008036	Coral	FLSRFGLKMGIDFKHFGLKLGMVIGGTFTKAYKLISLASNQAK*
Ga0099811_12035771	3300008036	Coral	RFGLKTDIDFEHFGLKLGMVIEGTFMKPYKLIFLPNNQGE*
Ga0099811_12405692	3300008036	Coral	MCRPKGYGFQSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRGE*
Ga0099811_13971631	3300008036	Coral	SCFGLKMGIDFEHFGLKLGMVIGGTFTKAYNLIFLPSERSE*
Ga0099813_10127521	3300008046	Coral	FGLKTGIDFEHFGLKLGMVIGGTFTKAYNLIFLPSDRGE*
Ga0099813_10264991	3300008046	Coral	KVYRYVPPQRVWFSSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099813_10426731	3300008046	Coral	QRVWFLSCFGLKTGIDFEHFGLKMGMVIVGTFMKAYNLIFLPSDWGE*
Ga0099813_10539311	3300008046	Coral	FGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0099813_11016733	3300008046	Coral	MGIDFEHFGLKLGMVIGGTFTKAYKIIFLPTHRGE*
Ga0099813_11172911	3300008046	Coral	RFGLKTGIDFEHFGLKLGMVIGGTFTKVYKLIFLPSNRGE*
Ga0126337_100008737	3300010031	Coral	MVLSRFGLKTGIDFEHFGLKLGIVIGGTFTKAYKIIFLPSNRGE*
Ga0126337_100065867	3300010031	Coral	MPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIF
Ga0126337_100070538	3300010031	Coral	MCRPKRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFL
Ga0126337_100180971	3300010031	Coral	FLSRFGLKTGVDFEHFGLKLGMVIGGTFTKAYKLIFLPSNRGE*
Ga0126337_100203315	3300010031	Coral	MCRPKGYVWFLSRFGLKTGIDFEHFGQKLGMVIVGTFTKAHKLIFLPSNQGE*
Ga0126337_100206124	3300010031	Coral	LSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHRDE*
Ga0126337_100222204	3300010031	Coral	PQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIFVPSNRGE*
Ga0126337_100232751	3300010031	Coral	FLSRFGLKTGVDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0126337_100260841	3300010031	Coral	GLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHQGE*
Ga0126337_100280491	3300010031	Coral	MGIDFKHFGLKLGMVIGGTFTKAYKIIFLPSHRGE
Ga0126337_100328384	3300010031	Coral	VWFLSRFGQKTGIDFEHFGLKLGMVIGGTFTKAYNLIFLPSDWGE*
Ga0126337_100373421	3300010031	Coral	RVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPRNQGE*
Ga0126337_100444591	3300010031	Coral	YRYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYNLIFLPSDRGE*
Ga0126337_100784682	3300010031	Coral	MVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLP
Ga0126337_100945142	3300010031	Coral	WFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSN*
Ga0126337_100996561	3300010031	Coral	LSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLP
Ga0126337_101048142	3300010031	Coral	LSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQVE*
Ga0126337_101131061	3300010031	Coral	VLPQRVWFLSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIF
Ga0126337_101598502	3300010031	Coral	MVFGLKTGIDFKPFGLKLGMVIGGTFTKAYKLIFLPSKRGE*
Ga0126337_101634301	3300010031	Coral	FLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNLGE*
Ga0126337_101848582	3300010031	Coral	WFLSRFGLKTGIDFEHFGLKLGMVIGGMFTKAYKLIFLPSNWGE*
Ga0126337_101891243	3300010031	Coral	FLSRFDLKTGINFEHFGLILGMVIGGTFTKAYNLIFVASDRGE*
Ga0126337_101951181	3300010031	Coral	WFLSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSQRGE*
Ga0126337_102158591	3300010031	Coral	LSRFGLKTGIDFEHFGLKLGMVIEGTFTKVYKLIFLP
Ga0126337_102165571	3300010031	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE
Ga0126337_102317052	3300010031	Coral	MSRFGLKTGIDFEHFGLKLGMVIEGTFMKAYKLIFLPSNRGE*
Ga0126337_102409581	3300010031	Coral	YVPPQRVWFLSRFGLKTGIDFEHFGLILGMVIGGTFTKAYKLIFLVSNQGE*
Ga0126337_102715913	3300010031	Coral	PPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIVFLPSNRR*
Ga0126337_102901641	3300010031	Coral	VPPQRAWFLSRFGLKTGIDFERFGLKLGMVIGGTFTKAYKIIFLPSN
Ga0126337_103081472	3300010031	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0126337_103126081	3300010031	Coral	PQRVWFLSRFGLNTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRGE*
Ga0126337_103188231	3300010031	Coral	VPPQRVWFLSRFCLETDIDFEHFGLKLGMVIEGTFTKAYKL
Ga0126337_103474251	3300010031	Coral	RVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNQGE*
Ga0126337_103480192	3300010031	Coral	GLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRGE*
Ga0126337_103561251	3300010031	Coral	PPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLILLSSNRGE*
Ga0126337_103567821	3300010031	Coral	MILGRFGLKTGINFEHFGLKLGMVIGGMFTKAYKIIFLLSHRGE*
Ga0126337_103637971	3300010031	Coral	VWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHRGE*
Ga0126337_104061471	3300010031	Coral	RVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLIFLLRNRGE*
Ga0126337_104182062	3300010031	Coral	MVFEPFGLKTGVDFKHFGLKMGMVNGGTFPEAYKLIFLSSNQGE*
Ga0126337_104390841	3300010031	Coral	MVWFLSRFGLKTGIEFEHFGLKLGMVIGGTFTKAYKIIFLLSNRGE*
Ga0126337_104409321	3300010031	Coral	SRFGLKTGIYFEHFGLKLGMVIGGTFTKVYKLIFLLSNQGE*
Ga0126337_104728982	3300010031	Coral	WFLSRFGLKTGIDFEHFGLKLGMVIRGTFTKAYNLIFLPSDRGE*
Ga0126337_105387601	3300010031	Coral	VPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKVYKLIF
Ga0126337_105469531	3300010031	Coral	VAPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKIIFLPS
Ga0126337_105731631	3300010031	Coral	VAPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFMKAYKLI
Ga0126337_105769822	3300010031	Coral	GIDFEYFGLKLGMVIGGTFTKAYKIIFLPSNRGE*
Ga0126337_105872781	3300010031	Coral	QRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKAYKLIFLPSNRGE*
Ga0126337_105912411	3300010031	Coral	RYVPPQRVWFLSRFGLKTGIDFEHFGLKLGMVIGGTFTKACKIIFLPSNRGE*
Ga0126337_106032092	3300010031	Coral	LSRFGLKMGIDFEHFGLKLGMVIGGTFTKAYKIIFLPSHRGE*
Ga0126337_106172981	3300010031	Coral	GIDFEHFGLKLGMVIGGTFTKAYKIIFLPSNRGE*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075674

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences