Metagenome Family F075824

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075824
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	106 residues
Representative Sequence	MTTMNDETDLRKAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMHVCGDEGAAAAS
Number of Associated Samples	58
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.42 %
% of genes near scaffold ends (potentially truncated)	33.90 %
% of genes from short scaffolds (< 2000 bps)	83.05 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.644 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (29.661 % of family members)
Environment Ontology (ENVO)	Unclassified (54.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.492 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.22% β-sheet: 8.96% Coil/Unstructured: 35.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.7.12.1: PhoU-like	d1xwma_	1xwm	0.70126
a.118.8.0: automated matches	d5j90a_	5j90	0.68365
a.7.1.1: Spectrin repeat	d1cuna2	1cun	0.67964
a.47.2.1: t-snare proteins	d1vcsa1	1vcs	0.67809
a.7.1.1: Spectrin repeat	d7a8ta4	7a8t	0.67616

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00486	Trans_reg_C	27.97
PF10706	Aminoglyc_resit	6.78
PF13414	TPR_11	3.39
PF13561	adh_short_C2	3.39
PF06568	DUF1127	3.39
PF12833	HTH_18	2.54
PF03401	TctC	1.69
PF04266	ASCH	1.69
PF04392	ABC_sub_bind	1.69
PF03009	GDPD	1.69
PF01636	APH	1.69
PF03475	3-alpha	0.85
PF08378	NERD	0.85
PF13181	TPR_8	0.85
PF13193	AMP-binding_C	0.85
PF01425	Amidase	0.85
PF13411	MerR_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	3.39
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	1.69
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	1.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.69
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	1.69
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.69
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	1.69
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.07 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.68 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.10 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.32 %
Rubellimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.85 %
Rubellimicrobium aerolatum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium aerolatum	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100059649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4026	Open in IMG/M
3300005332\|Ga0066388_100532950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1806	Open in IMG/M
3300005332\|Ga0066388_100630051	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300005332\|Ga0066388_100661520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300005332\|Ga0066388_101214644	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300005332\|Ga0066388_101679935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1122	Open in IMG/M
3300005332\|Ga0066388_101838862	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005332\|Ga0066388_103299904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300005332\|Ga0066388_103510448	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005332\|Ga0066388_106989771	Not Available	568	Open in IMG/M
3300005332\|Ga0066388_108396177	Not Available	515	Open in IMG/M
3300005713\|Ga0066905_100121203	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300005713\|Ga0066905_100179436	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300005713\|Ga0066905_100251830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300005713\|Ga0066905_100519876	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005713\|Ga0066905_100642779	Not Available	903	Open in IMG/M
3300005713\|Ga0066905_100764559	Not Available	835	Open in IMG/M
3300005713\|Ga0066905_101063886	Not Available	717	Open in IMG/M
3300005713\|Ga0066905_101915675	Not Available	549	Open in IMG/M
3300005764\|Ga0066903_100659339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1832	Open in IMG/M
3300005764\|Ga0066903_101217862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1399	Open in IMG/M
3300005764\|Ga0066903_101606324	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005764\|Ga0066903_103828825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium aerolatum	808	Open in IMG/M
3300005764\|Ga0066903_104005932	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005764\|Ga0066903_105884385	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_106339826	Not Available	617	Open in IMG/M
3300005937\|Ga0081455_10147260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1819	Open in IMG/M
3300006844\|Ga0075428_100104661	All Organisms → cellular organisms → Bacteria	3086	Open in IMG/M
3300006844\|Ga0075428_100410045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300006844\|Ga0075428_100465469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1354	Open in IMG/M
3300006844\|Ga0075428_100536639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1251	Open in IMG/M
3300006845\|Ga0075421_100224665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2312	Open in IMG/M
3300006845\|Ga0075421_100612333	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300006846\|Ga0075430_100024487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5134	Open in IMG/M
3300006847\|Ga0075431_100522423	Not Available	1176	Open in IMG/M
3300006852\|Ga0075433_10974464	Not Available	739	Open in IMG/M
3300006853\|Ga0075420_100580114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	968	Open in IMG/M
3300006880\|Ga0075429_100367418	Not Available	1260	Open in IMG/M
3300006880\|Ga0075429_100718400	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300006969\|Ga0075419_10166478	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300006969\|Ga0075419_11433397	Not Available	516	Open in IMG/M
3300009094\|Ga0111539_10660931	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300009100\|Ga0075418_10430588	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300009100\|Ga0075418_10448605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1382	Open in IMG/M
3300009147\|Ga0114129_10942471	Not Available	1091	Open in IMG/M
3300009147\|Ga0114129_12592689	Not Available	605	Open in IMG/M
3300009792\|Ga0126374_10474559	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300010043\|Ga0126380_10197046	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300010043\|Ga0126380_10472789	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010043\|Ga0126380_10634529	Not Available	847	Open in IMG/M
3300010043\|Ga0126380_10782730	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300010043\|Ga0126380_11772487	Not Available	557	Open in IMG/M
3300010046\|Ga0126384_10447382	Not Available	1102	Open in IMG/M
3300010046\|Ga0126384_10495223	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300010046\|Ga0126384_10569004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	987	Open in IMG/M
3300010046\|Ga0126384_11982401	Not Available	556	Open in IMG/M
3300010047\|Ga0126382_10044951	Not Available	2543	Open in IMG/M
3300010047\|Ga0126382_12498999	Not Available	504	Open in IMG/M
3300010048\|Ga0126373_13251160	Not Available	506	Open in IMG/M
3300010358\|Ga0126370_10034382	All Organisms → cellular organisms → Bacteria	3089	Open in IMG/M
3300010358\|Ga0126370_10883485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300010359\|Ga0126376_10064675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2648	Open in IMG/M
3300010359\|Ga0126376_10243373	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300010359\|Ga0126376_10332757	Not Available	1337	Open in IMG/M
3300010360\|Ga0126372_10062238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2602	Open in IMG/M
3300010360\|Ga0126372_10843226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	913	Open in IMG/M
3300010360\|Ga0126372_12599353	Not Available	558	Open in IMG/M
3300010361\|Ga0126378_11043295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300010362\|Ga0126377_10637672	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300010362\|Ga0126377_11958464	Not Available	662	Open in IMG/M
3300010366\|Ga0126379_11361933	Not Available	816	Open in IMG/M
3300010366\|Ga0126379_12030421	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_12587151	Not Available	605	Open in IMG/M
3300010398\|Ga0126383_10077079	All Organisms → cellular organisms → Bacteria	2894	Open in IMG/M
3300010398\|Ga0126383_10155491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2139	Open in IMG/M
3300012948\|Ga0126375_10179974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300012948\|Ga0126375_10511602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300012948\|Ga0126375_11448050	Not Available	585	Open in IMG/M
3300012971\|Ga0126369_12737657	Not Available	577	Open in IMG/M
3300016319\|Ga0182033_11562648	Not Available	596	Open in IMG/M
3300016341\|Ga0182035_10059768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2629	Open in IMG/M
3300016341\|Ga0182035_11106552	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300016371\|Ga0182034_10614658	Not Available	918	Open in IMG/M
3300016387\|Ga0182040_11192899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300016422\|Ga0182039_11301062	Not Available	659	Open in IMG/M
3300016422\|Ga0182039_11394386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	636	Open in IMG/M
3300016445\|Ga0182038_11992760	Not Available	526	Open in IMG/M
3300021560\|Ga0126371_10953786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1000	Open in IMG/M
3300021560\|Ga0126371_13236033	Not Available	551	Open in IMG/M
3300027907\|Ga0207428_10097343	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300027909\|Ga0209382_10024688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	7272	Open in IMG/M
3300027909\|Ga0209382_10037980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5780	Open in IMG/M
3300027909\|Ga0209382_10068133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4209	Open in IMG/M
3300031543\|Ga0318516_10606722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300031576\|Ga0247727_10064809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4223	Open in IMG/M
3300031679\|Ga0318561_10175016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1159	Open in IMG/M
3300031724\|Ga0318500_10357580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	722	Open in IMG/M
3300031740\|Ga0307468_100980306	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031744\|Ga0306918_11021126	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031777\|Ga0318543_10379159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300031879\|Ga0306919_10127371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1831	Open in IMG/M
3300031890\|Ga0306925_10023616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6183	Open in IMG/M
3300031890\|Ga0306925_12267195	Not Available	503	Open in IMG/M
3300031912\|Ga0306921_10346354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1738	Open in IMG/M
3300031912\|Ga0306921_10469484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300031912\|Ga0306921_10475668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1454	Open in IMG/M
3300031941\|Ga0310912_10700964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031942\|Ga0310916_11722714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300031954\|Ga0306926_10774120	Not Available	1159	Open in IMG/M
3300032001\|Ga0306922_10404225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1462	Open in IMG/M
3300032059\|Ga0318533_10640757	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300032076\|Ga0306924_10191675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2347	Open in IMG/M
3300032076\|Ga0306924_10768172	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300032091\|Ga0318577_10358791	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300032180\|Ga0307471_102744303	Not Available	625	Open in IMG/M
3300032205\|Ga0307472_100021805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3528	Open in IMG/M
3300032261\|Ga0306920_100044551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6428	Open in IMG/M
3300032261\|Ga0306920_101665632	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.66%
Host-Associated	Host-Associated	20.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.66%
Plants	Host-Associated → Plants	20.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.49%
Cave	Environmental → Terrestrial → Cave	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.78%
Loam	Environmental → Terrestrial → Soil → Loam	22.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	22.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.54%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1000596493	3300005332	Tropical Forest Soil	MSNETDLRIAVAYLHDLDDELEERSAVCGMRANSVAREDMLYELDHARKLLAVLERHASISCIIYHEGREMLIDLHKARTWCDLVEAKIMRVCGNESSAAASWRNA*
Ga0066388_1005329502	3300005332	Tropical Forest Soil	MTTIQIASELIESEETDLRKAIAYLHDLDAELEERSAVRRPHANSPARQDMLYQLDHARKLVAILERQASNISCISYHDGAKVLIDVHKARTWCHVVEAKIKLVFGDDSAAVR*
Ga0066388_1006300512	3300005332	Tropical Forest Soil	VNDETDLRKAIAYLQDLDAELEERSAVRGLRANSAVREDMLYQLDHARKLVTTLERQASNISCISHHDGGEGLIGVDKALTWCHLVEAKIMSVCGNESAAAAS*
Ga0066388_1006615202	3300005332	Tropical Forest Soil	VNDETDLCQAIAYLHDLDAELEERSAVGGLRANSAAPGDMLYQLDHARKLVAALVRHAPNIFCITYHGGEEVRIDLHKAWCHLIDAKIMCVCGDESAAAAR*
Ga0066388_1012146442	3300005332	Tropical Forest Soil	MNDDTDLRKAIAYLHDLDAELDERSTVRGLRANSAARGDMLYQLDYARKLVAALEHHASNVSCISYHDGVEMLIDLHKARTWCNLVEAKIMYVCGDEGAAAAS*
Ga0066388_1016799352	3300005332	Tropical Forest Soil	MITMNNETDLRKVIAYLHDLDAELDERTAVRGLRANSAARDDMLYQLDHARKLIAALERHASNVSCISHHDGAEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAS*
Ga0066388_1018388621	3300005332	Tropical Forest Soil	MSTIRSDEADLRKAIAYLHDLDVELEERSAVLGQCANWAVRKDLLYQLDHARKLVAALEHHASNSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMGVCGEESRDSRALDE*
Ga0066388_1032999042	3300005332	Tropical Forest Soil	MITMNNETELRKAIAYLHDLDAELDERTAVRGLRANSSARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAANEDHHSVPSNVRH*
Ga0066388_1035104481	3300005332	Tropical Forest Soil	AIAYLHDLDAELEERSAVCGQRANWAARKDMLYQLDHARKLVAVLEHHAPNTSCICCHDGGEVLIDLHKVCAWCHLVEAKIIGVCGE*
Ga0066388_1069897711	3300005332	Tropical Forest Soil	MNDEMDLRKAIAYLNDLDAEVDERSAARGPRANSAAREDMLYQLDHARKLVAALERNGCDVSCISYHDGGESLIDLHKTRTWCDLVEAKIMHVCGNESA
Ga0066388_1083961771	3300005332	Tropical Forest Soil	MTTSDQLNFKPGDCVVKDETDLRIAIAYLRDLDTELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGEEVLIDLHKARTWCHLVEAKIMRVCDE
Ga0066905_1001212032	3300005713	Tropical Forest Soil	MSTTQSHEADLREAIACLQDLDAELEERSAVRDQRANASAREDMLYQLDHARKLVAALQRQVPNISCISYHAGGQVLVDLQKARAWCQLVEARTMRVFGDARAIAAG*
Ga0066905_1001794362	3300005713	Tropical Forest Soil	MITMNDETDLRKAIAYLRDLDAELDERSAVAGLRANSAAREDMLYQLDHARKLVAALECHASNVYCISYDDGGEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAR*
Ga0066905_1002518302	3300005713	Tropical Forest Soil	VNDETDLRKAIAYLQDLDAELEERSAVRGLRANSAAREDMLYQFDHARKLLEVLERQAPNISCISYHNGGEVLIDLHKARTWCHLVEARIMRVCGVETAVVAG*
Ga0066905_1005198762	3300005713	Tropical Forest Soil	MSTIRSDEADLRKAIAYLHDLDVELEERSAVLGQCANWAVRKDMLYQLDHARKLVAALEHHASTSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMRVCGEESRDSRALDE*
Ga0066905_1006427792	3300005713	Tropical Forest Soil	MITMNNETELRKAIAYLHDLDAELDERTAVRGLRANSAARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAS*
Ga0066905_1007645592	3300005713	Tropical Forest Soil	VNDETDLRTAIAYLRDLDAELGERSAVLGLRANSAAREDMLYQLDHARKLVAALERYASNISCTSYHDGGEVLIDLHEARTWCHLVEAKIMRVCGDDSAAAAS*
Ga0066905_1010638861	3300005713	Tropical Forest Soil	MNDDTDLRKAIAYLHDLDAELDERSAVRGLRANSAARGDMLYQLDHARKLVAALEHHASNVSCISYHDGVEMLIDLHKARTWCHLVEAKILYVCGDEGAAAAS*
Ga0066905_1019156751	3300005713	Tropical Forest Soil	AHRSELGHGHGTSKRRSTGEDEMSTTQSHEADLREAIAYLQDLDAELEERSAVHDQRANSSAREDMLYQLDHARKLVAALERQAPNISCLSYQDGGQVLVDLHTARDWCHLVEAKINVHLR*
Ga0066903_1006593392	3300005764	Tropical Forest Soil	MNDEMDLRKAIAYLNDLDAEVDERSAARGPRANSAAREDMLYQLDHARKLVAALERNGCDVSCISYHDGGESLIDLHKTRTWCDLVEAKIM
Ga0066903_1012178622	3300005764	Tropical Forest Soil	MTTSDQLNFKPGDCVVKDETDLRIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALDRHASNMSCISYHNGGEVLIDLYKARTWCHLVEAKIMCVCDGESAAAAS*
Ga0066903_1016063242	3300005764	Tropical Forest Soil	MTTMSDETDLRKAIAYLHDLDAELDERSFVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVGVVIDLHKACTWCHLVEAKIMHVCGDEGAAAAS*
Ga0066903_1038288251	3300005764	Tropical Forest Soil	LNFKPEIAVMSNETDLRIAVAYLHDLDDELEERSAVCGMRANSVAREDMLYGLDHARKLLAVLERHTSISCIIYHEGREMLIDLHKARTWCDLVEAKIMRVCGNESSAAASWRNA*
Ga0066903_1040059322	3300005764	Tropical Forest Soil	MSTIRSDEADLRKAIAYLHDLDVELEERSAVLGQCANWAVRKDMLYQLDHARKLVAALEHHASNSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMGVCGEESRDSRALDE*
Ga0066903_1058843852	3300005764	Tropical Forest Soil	MITMNNETDLRKAIAYLHDLDAELDERTAVRGLRANSAARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAANEDHHSVPSNVRH*
Ga0066903_1063398262	3300005764	Tropical Forest Soil	MSNETDLRTAVAYLHDLDDELEERSAVCGMRANWAAREDLLYELDHARKLLAALERHASISCIIHHEGREMLIDLHKARTWCDLVEAKIMRVCGNESSAAAS*
Ga0081455_101472602	3300005937	Tabebuia Heterophylla Rhizosphere	MSTIRSDEADLRKAIAYLHDLDAELEERSAVLGQCANWAARKDMLYQLDHVRKLVAALEHHAPNTSCISCHDGGEVPIDLHKVRAWCHLVEAKIMGVCGEERAIAAG*
Ga0075428_1001046615	3300006844	Populus Rhizosphere	DLDAELEERSAVRDQQANSAARDDMFYQLDYARKLVVALERDASNVSCLSYHDGREALIDLHKARTWCDLVEARIMRVCGDERATAAG*
Ga0075428_1004100451	3300006844	Populus Rhizosphere	KVIAYLHDLDAELEERSGVRGLRVNSAARGDMLYQLDHARRLVAALERQASNISCSSSHDGREVLIDLHEARTWCHLVEAKIMRVCGDQSGSGR*
Ga0075428_1004654692	3300006844	Populus Rhizosphere	VNDDTDLCKVIAYLHDLDAELAERSAVAGLGANSAAREDMLYQLDHARKLVATLERRAPNISCLSCHDGREVLIDLHKARSWCHLVEATIMRICGDQSAVAAS*
Ga0075428_1005366392	3300006844	Populus Rhizosphere	VNDETDLCKAIAYLHDLDAELEERSAVRAMRVNSAARDDMLYQLDHARKIVAALEPQGSNISCLSYHNGGEVLIDLHKARTWCHLVEGKILRVCGAAGTAKDDPDRKILHLARQI*
Ga0075421_1002246653	3300006845	Populus Rhizosphere	VNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAARGDMLYQLDHARRLVAALERQASNISCSSSHDGREVLIDLHEARTWCHLVEAKIMRVCGDQSGSGR*
Ga0075421_1006123332	3300006845	Populus Rhizosphere	VAIGGGSLQPAAFNAKTAFVRLHLRKAIAYLRDLDAELEERSAVRDQQANSAARDDMFYQLDYARKLVVALERDASNVSCLSYHDGREALIDLHKARTWCDLVEARIMRVCGDERATAAG
Ga0075430_1000244871	3300006846	Populus Rhizosphere	RWAVTCVTSANRKPGDCIVNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAAREDMLYQLDHARRLVAALERQASNISCLSSRDGREVLIDLHEARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0075431_1005224233	3300006847	Populus Rhizosphere	VNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAAREDMLYQLDHARRLVAALERQASNISCLSSRDGREVLIDLHEARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0075433_109744641	3300006852	Populus Rhizosphere	MTTIHRAAGFVRDRVVNYETDLRKVISYLQDLDAELEERSAVRGLRVNAPAREDLLYQLDHARKLVAALECKASNISCLSNHNGSEVLIDLHKARIWCDLVDARIVSISGDQSAATAS*
Ga0075420_1005801143	3300006853	Populus Rhizosphere	VNDETDLCKAIAYLHDLDAELEERSAVRAMRVNSAARDDMLYQLDHARKIVAALEPQGSNISCLSYHNGGEVLIDLHKARTWCHLVEGKILRVCGAAGTAKDDPDRK
Ga0075429_1003674182	3300006880	Populus Rhizosphere	VNDETDLRKVIAYLRDLDAELEERSGVRGLRVNSAARDHMLYQLDSARKLVAALEHQAPNISCLSSHDGSEVQIDLHKARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0075429_1007184002	3300006880	Populus Rhizosphere	PLRRQPARHNYHAPLAEQTVAIGGGSLQPAAFNAKTAFVRLHLRKAIAYLRDLDAELEERSAVRDQQANSAARDDMFYQLDYARKLVVALERDASNVSCLSYHDGREALIDLHKARTWCDLVEARIMRVCGDERATAAG*
Ga0075419_101664781	3300006969	Populus Rhizosphere	RLHLRKAIAYLRDLDAELEERSAVRDQQANSAARDDMFYQLDYARKLVVALERDASNVSCLSYHDGREALIDLHKARTWCDLVEARIMRVCGDERATAAG*
Ga0075419_114333971	3300006969	Populus Rhizosphere	VNDDTDLCKVIAYLHDLDAELEERSGVRGLRVNSAAREDMLYQLDHARRLVAALERQASNISCLSSRDGREVLIDLHEARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0111539_106609312	3300009094	Populus Rhizosphere	VTDETELRKAIAYLQDLDAELEERSAVRGLRANSVAREDMLYQLDRAGTFLAALERQAPNLSCISYHDGREVLIDVHKARTWCHLVEARIRASAAARLRWP
Ga0075418_104305881	3300009100	Populus Rhizosphere	VIAYLHDLDAELAERSAVAGLGANSAAREDMLYQLDHARKLVATLERRAPNISCLSCHDGREVLIDLHKARSWCHLVEATIMRICGDQSAVAAS*
Ga0075418_104486051	3300009100	Populus Rhizosphere	VNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAARGDMLYQLDHARRLVAALERQASNISCLSSRDGREVLIDLHEARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0114129_109424711	3300009147	Populus Rhizosphere	QLDWKPGDCVVNDETDLRKVIAYLNDLDAELEERSGVRGLRVNSAAREDMLYQLDHARRLVAALERQASNISCLSCHDGREVLIDLHKARTWCHLVEAKIMRVCGDQSAAAAS*
Ga0114129_125926891	3300009147	Populus Rhizosphere	IPLRRQPARHNYHAPLAEQTVAIGGGSLQPAAFNAKTAFVRLHLRKAIAYLRDLDAELEERSAVRDQQANSAARDDMFYQLDYARKLVVALERDASNVSCLSYHDGREALIDLHKARTWCDLVEARIMRVCGDERATAAG*
Ga0126374_104745592	3300009792	Tropical Forest Soil	MSTTQSHEADLREAIACLQDLDAELEERSAVRDQRANASAREDMLYQLDHARRLVAALERQAPNISCLSYQDGGQVLVDLHTARAWCQLVEARTMRVFGDARAIAAG*
Ga0126380_101970462	3300010043	Tropical Forest Soil	MITMNNETELRKAIAYLHDLDAELDERTAVRGLRANSSARDDMLYQLDHARKLVAALERHASNVSCISHHDGAEVLIDLHKARTWCHLVEAKIMHVCGDEGAAAAN*
Ga0126380_104727891	3300010043	Tropical Forest Soil	MITMNDETDLRKAIAYLRDLDAELDERSAVRGLRANSAAREDMLYQLDHARKLVAALERYASNISCTSYHDGGEVLIDLHEARTWCHLVESKIKRVCGDDSAAAS*
Ga0126380_106345291	3300010043	Tropical Forest Soil	KPGDCVVKDETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLGHARKLVAALEQHASNISCISYHNGGEVLIDLHKARTWCDLVEAKIMRVCDEESAAAAS*
Ga0126380_107827301	3300010043	Tropical Forest Soil	MTMMNEETDLRKAIAYLHDLDAELEERSAVCGQRANWAARKDMLYQLDHARKLVAVLEHHAPNTSCICCHDGGEALIDLHKVCAWCHLVEAKIIGVCGE*
Ga0126380_117724871	3300010043	Tropical Forest Soil	MSTIRSDEADLRKAIAYLHDLDVELEERSAVLGQCANWAVRKDMLYQLDHARKLVAALEHHASNSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMRVCGEESRDSRALDE*
Ga0126384_104473823	3300010046	Tropical Forest Soil	NDETDLRKAIAYLHDLDAELEERSAVRGPRANSAAREDMLYQLDHARKLVAALECHASNVYCISYDDGGEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAR*
Ga0126384_104952232	3300010046	Tropical Forest Soil	MTTSDQLNFKPGDCVVKDETDLRIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS*
Ga0126384_105690041	3300010046	Tropical Forest Soil	MSTTQSHEADLREAIAYLQDLDAELEERSAVHDQRANSSAREDMHYQLDHARKLVAALERQAPNISCLSYQDGEQVLVDLHTARDWCHLVEAKINVHLR*
Ga0126384_119824011	3300010046	Tropical Forest Soil	MSTTQSHEADLREAIACLQDLDAELEERSAVRDQRANASAREDMLYQLDHARRLVAALQRQVPNISCISYHAGGQVLVDLQKARAWCQLVEARTMRVFGDARAIAAG*
Ga0126382_100449511	3300010047	Tropical Forest Soil	MNDDTDLRKAIAYLHDLDAELDERSAVRGLRANSAARGDMLYQLDHARKLVAALEHHASNVSCISYHDGVEMLIDLHKARTWCHLVEAKILYICGDEGAAAAS*
Ga0126382_124989991	3300010047	Tropical Forest Soil	MSTTQSHEADLRKAIAYLQDLDAELEERSAVHDQRANSSAREAMLYQLDHARKLVAALERQAPNVSCLSYQDGGQVLVDLHTARDWCHLVEAKINVHLR*
Ga0126373_132511601	3300010048	Tropical Forest Soil	MSHQLNFKPGDCVVNDETDLRKAIAYLRDLDAELDERSAVRGLRANSAAREDMLYQLDHARKLVAALERYASNISCTSYHDGGEVLIDLHEARTWCHLVESKIKRVCGDDSAAAS*
Ga0126370_100343822	3300010358	Tropical Forest Soil	LNFKPEIAVMSNETDLRIAVAYLHDLDDELEERSAVCGMRANSVAREDMLYELDHARKLLAVLERHASISCIIYHEGREMLIDLHKARTWCDLVEAKIMRVCGNESSAAASWRNA*
Ga0126370_108834852	3300010358	Tropical Forest Soil	MNDEMDLRKAIAYLNDLDAEVDERSAARGPRANSAAREDMLYQLDHARKLVAALERNGCDVSCISYHDGGESLIDLHKTRTWCDLVEAKIMHVCGNESAAARAR*
Ga0126376_100646753	3300010359	Tropical Forest Soil	VNDETDLRKAIAYLLDLDAELDERSAVRGLRANSAAREDMLYQLDHARKIVAALERHASNISCISYRDGGEVLIDVHKAHTWCHLIETKIMRVCGDDSAAAAS*
Ga0126376_102433731	3300010359	Tropical Forest Soil	MTTSDQQNFKPGDCVVKDETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS*
Ga0126376_103327571	3300010359	Tropical Forest Soil	TSDQLNFKPEDCVVKDETDLRRAIAYLHDLDAEVDERSAVAGLRANPAARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAR*
Ga0126372_100622382	3300010360	Tropical Forest Soil	LRICETLTAELEERSAIRGLRANSAARDDMLYQLDHARKLVAALDRHASTMSCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCGDDSAAAS*
Ga0126372_108432262	3300010360	Tropical Forest Soil	MTTMNDETDLRKAIAYLHDLDAELDERSVVRGLLANAAAREDMLYQLDLARKLVAALESHASNVSCMSYHDGGEVLIDLHEARTWCHLVEAKIMRVCGDDSAAAS*
Ga0126372_125993531	3300010360	Tropical Forest Soil	RKAIAYLHDLDVELEERSAVLGQCANWAVRKDMLYQLDHARKLVAALEHHASNSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMGVCGEESRDSRALDE*
Ga0126378_110432952	3300010361	Tropical Forest Soil	MLMAWIRRRPGEAEMTTSDQLNFKPGDCVVKDETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALESHASTISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS*
Ga0126377_106376721	3300010362	Tropical Forest Soil	MSTIRSDEADLRKAIAYLHDLDVELEERSAVLGQCANWAVRKDMLYQLDHARKLVAALEHHASTSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMGVCGEESRD
Ga0126377_119584641	3300010362	Tropical Forest Soil	AALAHAHERGNDVRSGEAEMITMNNETDLRKVIAYLHDLDAELDERTAVRGLRANSAARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAANEDHHSVPSNVRH*
Ga0126379_113619331	3300010366	Tropical Forest Soil	VNDETDLRKAIAYLRDLDAELDERSAVRGLRANSAAREDMLYQLDHARKLVPALARSASNISCTSSHDGGEVLIDLHEARPWCHLVESKIKRVC
Ga0126379_120304211	3300010366	Tropical Forest Soil	ETDLRKAIAYLHDLDAELEERSAVSGMRANSAAREDMLYQLDHARKLVAALECLASNISCISYHDGGEVLIDLHKARTWCDLVQAKIMHVCGDKSAAVAS*
Ga0126379_125871511	3300010366	Tropical Forest Soil	MTMMNEETDLRKAIAYLHDLDAELEERSAARGMRANSAARVGMLYQLDHARKLVAALERHGSSVSCIGHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS*
Ga0126383_100770793	3300010398	Tropical Forest Soil	MLMAWIRRRPGEAEMTTSDQLNFKPGDCVVKDETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS*
Ga0126383_101554913	3300010398	Tropical Forest Soil	MITMNDETDLRKAIAYLLDLDAELDERSAVRGLRANSAAREDMLYQLDHARKIVAALERHASNISCISYRDGGEVLIDVHKAHTWCHLIETKIMRVCGDDSAAAAS*
Ga0126375_101799742	3300012948	Tropical Forest Soil	MITMNNETDLRKAIAYLHDLDAELDERTAVRGLRANSAARDDMLYQLDHARKLVAALERHASNVSCISHHDGVEVLIDLHKARTWCHLVEAKIMYVCGDEGAAAAS*
Ga0126375_105116021	3300012948	Tropical Forest Soil	VNDETDLRTAIAYLRDLDAELGERSAVLGLRVNSAAREDMLYQLDHARKLVAALERYASNISCTSYHDGGEVLIDLHEARTWCHL
Ga0126375_114480501	3300012948	Tropical Forest Soil	VNDETDLRKAIAYLQDLDAELEERSAVRGLRANSAAREDMLYQFDHARKLLEVLERQAPNISCISYHNGGEVLIDLHKARTWCHLVEARIMRVC
Ga0126369_127376571	3300012971	Tropical Forest Soil	VNDETDLRKAIAYLRDLDAELDERSAVRGLRANSAAREDMLYQLDHARKLVAALEHHASNSSCISCHDGGEVPIDLHKVRAWCDLVEAKIMGVCGEESRDSRALDE*
Ga0182033_115626482	3300016319	Soil	IRRRPGEAEMTTSDQLNFKLGDCVVNDETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS
Ga0182035_100597683	3300016341	Soil	MTTMNEETSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATNAS
Ga0182035_111065521	3300016341	Soil	MTTMNDETDLRKAIAYLHDLDAELDERSVVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMHVCGDEGAAAGS
Ga0182034_106146582	3300016371	Soil	DLCKAIAYLLDLDTELDERSAVRGLPANAAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVLIDLHKASTWCHLVEAKIMHVCGDEGAAAAS
Ga0182040_111928992	3300016387	Soil	MTTMNDETDLRKAIAYLRDLDVELDERSAVRGLRANSAARDDMVYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLIEAKIMNVCGDEG
Ga0182039_113010621	3300016422	Soil	LHIAIAYLRDLDAELEERSAVRGLRANSAVRDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS
Ga0182039_113943861	3300016422	Soil	MTTMNEEMSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0182038_119927601	3300016445	Soil	MTTMNDETDLRKAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMHVCGDEGAAAAS
Ga0126371_109537862	3300021560	Tropical Forest Soil	MTTSDQLRFKPGDCVVKDETDLRIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALESHASTIACISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDGESAAAAS
Ga0126371_132360331	3300021560	Tropical Forest Soil	VNDETDLRKAIAYLLDLDAELDERSAVRGLRANSAAREDMLYQLDHARKIVAALERHASNISCISYRDGGEVLIDVHKAHTWCHLVETKIMRVCGDDSAAAASWMNALRRVGLELRRSVTRIEQR
Ga0207428_100973433	3300027907	Populus Rhizosphere	VTDETELRKAIAYLQDLDAELEERSAVRGLRANSVAREDMLYQLDRAGTLLAALERQAPNLSCISYHDGREVLIDVHKARTWCHLVEARIMRVCGGETAVAAG
Ga0209382_100246885	3300027909	Populus Rhizosphere	VNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAAREDMLYQLDHARRLVAALERQASNISCLSSRDGREVLIDLHEARTWCHLVEAKIMRVCGDQSAAAAS
Ga0209382_100379803	3300027909	Populus Rhizosphere	VNDDTDLCKVIAYLHDLDAELAERSAVAGLGANSAAREDMLYQLDHARKLVATLERRAPNISCLSCHDGREVLIDLHKARSWCHLVEATIMRICGDQSAVAAS
Ga0209382_100681334	3300027909	Populus Rhizosphere	VNDETDLRKVIAYLHDLDAELEERSGVRGLRVNSAARGDMLYQLDHARRLVAALERQASNISCSSSHDGREVLIDLHEARTWCHLVEAKIMRVCGDQSGSGR
Ga0318516_106067222	3300031543	Soil	MTTMNDETDLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0247727_100648093	3300031576	Biofilm	VNDETDLRKAIAYLHDLDAELEERSAVRVLRVNSAAREDMLYQLDHARKLVAALERQASNISCISHHDGGEVLIDVQKAHTWCHLVEARIMRVCGDQSAAAAG
Ga0318561_101750162	3300031679	Soil	MTTMNEETDLRKAIAYLHDLDAELDERSVVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMHVCGDEGAAAAS
Ga0318500_103575802	3300031724	Soil	MTTMNEEMSLRKAIAYLHDLDAELQERGAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0307468_1009803062	3300031740	Hardwood Forest Soil	KVIALLHDLEAELEERSAVPGLRVNSAAREDMLYQLDQARNLVATLERRASNISCLSCRDGGEVLIDLHKARTWCHLVEARIMGVCGDQSAAAAS
Ga0306918_110211261	3300031744	Soil	MTTSDQLNFKPGDCVVKHETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCD
Ga0318543_103791591	3300031777	Soil	DLDAELEERSAARGLRANSAARVGMLYQLDHARTLVAALERHGSNVSCISHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS
Ga0306919_101273713	3300031879	Soil	MTTMNEETSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS
Ga0306925_100236166	3300031890	Soil	MTTMNEETSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0306925_122671951	3300031890	Soil	MTTMNDETDLRKAIAYLHDLDAELDERGVVRGLHANSAAREDMLYQLDHAWKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMRVCD
Ga0306921_103463541	3300031912	Soil	MTTMNDETDLRKAIAYLHDLDAELDERSVVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMHVCGDEGAAATS
Ga0306921_104694841	3300031912	Soil	MTTMNEETSLRKAIAYLHDLDAELQERGAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0306921_104756683	3300031912	Soil	SLRKAIAYLHDLDAELQERGAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS
Ga0310912_107009642	3300031941	Soil	EMTTMNEETSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKIMRVCGDESATTAS
Ga0310916_117227142	3300031942	Soil	VAEMTTMNEEMSLRKAIAYLHDLDAELQERGAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS
Ga0306926_107741201	3300031954	Soil	GGAEMTTMNDETDLRKAIAYLHDLDAELDERSVVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMHVCGDEGAAAAS
Ga0306922_104042251	3300032001	Soil	KAIAYLHDLDAELQERGAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHHDAGEVLIDLDKARTWCQLVEAKIMRVCGDESATTAS
Ga0318533_106407572	3300032059	Soil	MTTSDQLNFKPGDCVVKHETDLHIAIAYLRDLDAELEERSAVRGLRANSAVRDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS
Ga0306924_101916751	3300032076	Soil	MTTMNEETSLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQ
Ga0306924_107681722	3300032076	Soil	LHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS
Ga0318577_103587911	3300032091	Soil	MTTMNDETDLRKAIAYLHDLDAELEERSAARGLRANSAAREGMLYQLDHARTLVAALERHGSNVSCISHRDAGEVLIDLDRARTWCQLVEAKI
Ga0307471_1027443032	3300032180	Hardwood Forest Soil	VTDETNLRKVIALLHDLEAELEERSAVPGLRVNSAAREDMLYQLDQARNLVATLERRASNISCLSCRDGGEVLIDLHKARTWCHLVEARIMGVCGDQSAAAAS
Ga0307472_1000218052	3300032205	Hardwood Forest Soil	VNDETDLRKAIAYLQDLDVELEERSAVRGLCANSAAREDMVYQLDHARRLLAALERQAPNISCVSYQDGREVVIDAHKARTWCHLVEARIMRVCGGETAVAAS
Ga0306920_1000445515	3300032261	Soil	VKHETDLHIAIAYLRDLDAELEERSAVRGLRANSAARDDMLYQLDHARKLVAALERHASNISCISYHNGGEVLIDLHKARTWCHLVEAKIMRVCDEECAAAAS
Ga0306920_1016656322	3300032261	Soil	MTTMNDETDLRKAIAYLHDLDAELDERSVVRGLHANSAAREDMLYQLDHARKIVAALESHASNVSYMSYHDGVEVVIDLHKASTWCHLVEAKIMHVCGDEGAAAAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075824

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences