NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075850

Metagenome / Metatranscriptome Family F075850

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075850
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 61 residues
Representative Sequence HRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE
Number of Associated Samples 73
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.39 %
% of genes near scaffold ends (potentially truncated) 80.51 %
% of genes from short scaffolds (< 2000 bps) 87.29 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (54.237 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(15.254 % of family members)
Environment Ontology (ENVO) Unclassified
(36.441 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.407 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.12%    β-sheet: 0.00%    Coil/Unstructured: 45.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF04237YjbR 5.93
PF09900DUF2127 5.08
PF00072Response_reg 2.54
PF08818DUF1801 2.54
PF08240ADH_N 2.54
PF00557Peptidase_M24 1.69
PF05163DinB 1.69
PF01699Na_Ca_ex 1.69
PF02624YcaO 0.85
PF03976PPK2 0.85
PF01790LGT 0.85
PF04471Mrr_cat 0.85
PF00873ACR_tran 0.85
PF13458Peripla_BP_6 0.85
PF00293NUDIX 0.85
PF00583Acetyltransf_1 0.85
PF14066DUF4256 0.85
PF01593Amino_oxidase 0.85
PF00596Aldolase_II 0.85
PF07238PilZ 0.85
PF02371Transposase_20 0.85
PF00589Phage_integrase 0.85
PF13517FG-GAP_3 0.85
PF01427Peptidase_M15 0.85
PF11453DUF2950 0.85
PF03631Virul_fac_BrkB 0.85
PF00593TonB_dep_Rec 0.85
PF12222PNGaseA 0.85
PF01345DUF11 0.85
PF12838Fer4_7 0.85
PF12704MacB_PCD 0.85
PF14113Tae4 0.85
PF00254FKBP_C 0.85
PF04366Ysc84 0.85
PF13231PMT_2 0.85
PF00171Aldedh 0.85
PF02641DUF190 0.85
PF10604Polyketide_cyc2 0.85
PF06262Zincin_1 0.85
PF02653BPD_transp_2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 5.93
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 2.54
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 2.54
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 2.54
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 1.69
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 1.69
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 1.69
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.85
COG0682Prolipoprotein diacylglyceryltransferaseCell wall/membrane/envelope biogenesis [M] 0.85
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.85
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.85
COG1944Ribosomal protein S12 methylthiotransferase accessory factor YcaOTranslation, ribosomal structure and biogenesis [J] 0.85
COG1993PII-like signaling proteinSignal transduction mechanisms [T] 0.85
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 0.85
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 0.85
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.85
COG3547TransposaseMobilome: prophages, transposons [X] 0.85
COG3824Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domainPosttranslational modification, protein turnover, chaperones [O] 0.85
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms54.24 %
UnclassifiedrootN/A45.76 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120980269All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4758Open in IMG/M
3300004153|Ga0063455_100000173All Organisms → cellular organisms → Bacteria6915Open in IMG/M
3300004153|Ga0063455_100248874Not Available929Open in IMG/M
3300005329|Ga0070683_100704132All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005434|Ga0070709_10485225All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117936Open in IMG/M
3300005435|Ga0070714_100883268All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300005435|Ga0070714_101397515All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005435|Ga0070714_101575373Not Available642Open in IMG/M
3300005435|Ga0070714_101746922All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005436|Ga0070713_100144858All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2108Open in IMG/M
3300005436|Ga0070713_100760370Not Available927Open in IMG/M
3300005436|Ga0070713_100810840All Organisms → cellular organisms → Bacteria → Acidobacteria898Open in IMG/M
3300005437|Ga0070710_10223685Not Available1198Open in IMG/M
3300005437|Ga0070710_11407352All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117521Open in IMG/M
3300005454|Ga0066687_10682795Not Available610Open in IMG/M
3300005458|Ga0070681_10068792Not Available3507Open in IMG/M
3300005458|Ga0070681_10324219Not Available1450Open in IMG/M
3300005458|Ga0070681_10561164Not Available1056Open in IMG/M
3300005526|Ga0073909_10290413Not Available740Open in IMG/M
3300005533|Ga0070734_10038049Not Available2991Open in IMG/M
3300005535|Ga0070684_100195997All Organisms → cellular organisms → Bacteria1839Open in IMG/M
3300005535|Ga0070684_100826403All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117867Open in IMG/M
3300005537|Ga0070730_10469241All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales810Open in IMG/M
3300005547|Ga0070693_100732632Not Available727Open in IMG/M
3300005557|Ga0066704_10561962All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117741Open in IMG/M
3300005563|Ga0068855_100248521All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1171984Open in IMG/M
3300005563|Ga0068855_101351932Not Available736Open in IMG/M
3300005575|Ga0066702_10621904All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaU1.Bin208647Open in IMG/M
3300005614|Ga0068856_100241903All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1171820Open in IMG/M
3300005614|Ga0068856_100529490Not Available1199Open in IMG/M
3300005614|Ga0068856_101220451All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005896|Ga0075282_1007934All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300006028|Ga0070717_10173488All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300006804|Ga0079221_10898531Not Available650Open in IMG/M
3300006854|Ga0075425_100629974All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300006871|Ga0075434_100572414Not Available1149Open in IMG/M
3300006954|Ga0079219_11357974Not Available631Open in IMG/M
3300006954|Ga0079219_11741827Not Available580Open in IMG/M
3300009093|Ga0105240_10355243All Organisms → cellular organisms → Bacteria1661Open in IMG/M
3300009098|Ga0105245_10052031All Organisms → cellular organisms → Bacteria3672Open in IMG/M
3300009098|Ga0105245_10558349All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1171167Open in IMG/M
3300009174|Ga0105241_11554206Not Available638Open in IMG/M
3300009545|Ga0105237_10367231All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300009545|Ga0105237_10606371Not Available1102Open in IMG/M
3300009545|Ga0105237_10751612All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300009545|Ga0105237_12132062Not Available570Open in IMG/M
3300009551|Ga0105238_10234350All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1171813Open in IMG/M
3300009551|Ga0105238_10279197All Organisms → cellular organisms → Bacteria1651Open in IMG/M
3300010371|Ga0134125_10789747All Organisms → cellular organisms → Bacteria → Acidobacteria1045Open in IMG/M
3300010371|Ga0134125_10876543All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium986Open in IMG/M
3300010371|Ga0134125_11657092Not Available696Open in IMG/M
3300010373|Ga0134128_10238586Not Available2041Open in IMG/M
3300010373|Ga0134128_10262203Not Available1938Open in IMG/M
3300010373|Ga0134128_11953819All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300010396|Ga0134126_12428731Not Available570Open in IMG/M
3300010397|Ga0134124_10936340Not Available875Open in IMG/M
3300010397|Ga0134124_11780542All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117649Open in IMG/M
3300011442|Ga0137437_1253099All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300012202|Ga0137363_10011708All Organisms → cellular organisms → Bacteria5628Open in IMG/M
3300012202|Ga0137363_10053081All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1172914Open in IMG/M
3300012351|Ga0137386_10649742Not Available759Open in IMG/M
3300012469|Ga0150984_107976761Not Available935Open in IMG/M
3300012917|Ga0137395_10579099All Organisms → cellular organisms → Bacteria → Acidobacteria810Open in IMG/M
3300012923|Ga0137359_10995292Not Available720Open in IMG/M
3300012957|Ga0164303_10317132All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300012957|Ga0164303_10344369All Organisms → cellular organisms → Bacteria → Acidobacteria898Open in IMG/M
3300012958|Ga0164299_10473851All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis825Open in IMG/M
3300012958|Ga0164299_11386060Not Available542Open in IMG/M
3300012960|Ga0164301_10168212All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300012960|Ga0164301_11302911Not Available589Open in IMG/M
3300012964|Ga0153916_12078844Not Available637Open in IMG/M
3300012984|Ga0164309_10097869All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1844Open in IMG/M
3300012984|Ga0164309_11175882All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300012986|Ga0164304_10062052All Organisms → cellular organisms → Bacteria2085Open in IMG/M
3300012987|Ga0164307_11032014Not Available671Open in IMG/M
3300012988|Ga0164306_10230075All Organisms → cellular organisms → Bacteria → Terrabacteria group1318Open in IMG/M
3300012988|Ga0164306_10249189All Organisms → cellular organisms → Bacteria → Acidobacteria1272Open in IMG/M
3300012988|Ga0164306_10850181All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117739Open in IMG/M
3300012989|Ga0164305_10318255All Organisms → cellular organisms → Bacteria → Acidobacteria1158Open in IMG/M
3300012989|Ga0164305_11430012Not Available610Open in IMG/M
3300012989|Ga0164305_11434887Not Available609Open in IMG/M
3300013105|Ga0157369_10010842All Organisms → cellular organisms → Bacteria10380Open in IMG/M
3300013105|Ga0157369_10111527All Organisms → cellular organisms → Bacteria2907Open in IMG/M
3300013105|Ga0157369_10173421All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. WS92271Open in IMG/M
3300013105|Ga0157369_10632015Not Available1104Open in IMG/M
3300013296|Ga0157374_11379199Not Available727Open in IMG/M
3300013306|Ga0163162_10691126All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300013307|Ga0157372_11024617All Organisms → cellular organisms → Bacteria → Acidobacteria956Open in IMG/M
3300013307|Ga0157372_11408119Not Available804Open in IMG/M
3300013307|Ga0157372_12053703Not Available657Open in IMG/M
3300014968|Ga0157379_11855979Not Available593Open in IMG/M
3300014969|Ga0157376_12405983All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300015245|Ga0137409_10322276All Organisms → cellular organisms → Bacteria → Proteobacteria1353Open in IMG/M
3300015264|Ga0137403_10118533All Organisms → cellular organisms → Bacteria2640Open in IMG/M
3300015371|Ga0132258_12491961Not Available1294Open in IMG/M
3300020070|Ga0206356_10771935Not Available553Open in IMG/M
3300025898|Ga0207692_10124882All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300025898|Ga0207692_10770987Not Available628Open in IMG/M
3300025905|Ga0207685_10113889Not Available1176Open in IMG/M
3300025906|Ga0207699_11427457Not Available512Open in IMG/M
3300025912|Ga0207707_10581529Not Available949Open in IMG/M
3300025914|Ga0207671_10695192All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300025915|Ga0207693_10762417All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300025916|Ga0207663_11280872Not Available590Open in IMG/M
3300025921|Ga0207652_10607467All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300025921|Ga0207652_10632325All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300025924|Ga0207694_10843223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300025928|Ga0207700_11070226All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300025928|Ga0207700_11126868Not Available701Open in IMG/M
3300025928|Ga0207700_11138833Not Available697Open in IMG/M
3300025928|Ga0207700_11946285Not Available514Open in IMG/M
3300025949|Ga0207667_10754284Not Available972Open in IMG/M
3300026041|Ga0207639_10060493All Organisms → cellular organisms → Bacteria2922Open in IMG/M
3300026078|Ga0207702_11693110Not Available625Open in IMG/M
3300026078|Ga0207702_11845348Not Available596Open in IMG/M
3300026078|Ga0207702_12091901Not Available556Open in IMG/M
3300027857|Ga0209166_10147782All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300031716|Ga0310813_12406149Not Available500Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere15.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.41%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.47%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere8.47%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil7.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere7.63%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil3.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.85%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005896Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12098026913300002568SoilNVSFARVHRNMEALEQVGIFDPLMMQALNRQSEKLWAGVNYHLLETMRGIEERDRE*
Ga0063455_10000017393300004153SoilVHRNMEALEQVGIFDPLMMQTLNRQSEHLRAGVNHHLLGAMRRIEERDREKFSQPPNE*
Ga0063455_10024887413300004153SoilVHRNMEALEQVGIFDPLMMQALNRQSEKLWAGVNYHLLETMRGIEERDRE*
Ga0070683_10070413213300005329Corn RhizosphereKRLWTAAIFDPLMMQTLNRQSEQLRAGANYHLLGAMRRVEGRDRERFSQPRSEQNS*
Ga0070709_1048522513300005434Corn, Switchgrass And Miscanthus RhizosphereRLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0070714_10088326823300005435Agricultural SoilALEAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDRDRFQQTPGEQSS*
Ga0070714_10139751523300005435Agricultural SoilARVHRNMEALEAIGIFDPLMMQVLNRQHEQLRAGANYHLLGAMRRIEERDRQRFAQPPNEEIPNP*
Ga0070714_10157537323300005435Agricultural SoilQAVGIFDPLMMQNLNRQHEQLRAGTNHHLLGAMRRIEERDRDRFSQPPNE*
Ga0070714_10174692223300005435Agricultural SoilALEAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDRDRFQQTPSE*
Ga0070713_10014485833300005436Corn, Switchgrass And Miscanthus RhizosphereYDLLNRLNASFARVHRNMVALEQAGIFDPLMMQNLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0070713_10076037023300005436Corn, Switchgrass And Miscanthus RhizosphereRNMEALEQVGIFDPLMMQAINCQHEKVRAGANYHLLGAMRRIEERDRERFSQPANEEILTT*
Ga0070713_10081084023300005436Corn, Switchgrass And Miscanthus RhizosphereLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQHEKLRAGANYHLLGAMRRIEERDRERFSQPANEEILTT*
Ga0070710_1022368523300005437Corn, Switchgrass And Miscanthus RhizosphereAAFARVHRNMEALQAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDRERFSQPPNE*
Ga0070710_1140735213300005437Corn, Switchgrass And Miscanthus RhizosphereMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0066687_1068279523300005454SoilARVHRNMVALEQVGIFDPLIMQALNRQSEQLRAGANYHLLGAMRRVEERDRDRFSQPPNE
Ga0070681_1006879213300005458Corn RhizosphereMAALTAVGIFDPLIMQMLNRQFETLRAGSNSHLLGAMRRIEERDRERFSQPPNELNP*
Ga0070681_1032421913300005458Corn RhizosphereYDLLNRLNASFARVHRNMAALEAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDRERFSQPPNE*
Ga0070681_1056116423300005458Corn RhizosphereRLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEQLRAGANYHLLGAMRLIV*
Ga0073909_1029041323300005526Surface SoilMAALERVGIFDPLMMQVLSRQSEKLRAGANYHLLGTLRGIEERDREKFSQPPTE*
Ga0070734_1003804963300005533Surface SoilALEAVGIFDPLMMQNLNRQHEQLRAGANCHLLGAMRRIEERDRERFSQPPSEQNS*
Ga0070684_10019599713300005535Corn RhizosphereMAALEQVGIFDPLMMQTLNRQSEQLRAGANYHLLSAMRRIEERDRE
Ga0070684_10082640323300005535Corn RhizosphereRVHRNMEALEQVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRQRFAQPPNEEIPNS*
Ga0070730_1046924123300005537Surface SoilMEALEQVGIFDPLMMQSLNRQHEKLRAGVNCHLLGAMRRIEERDRERFSQPPNEEIPNP*
Ga0070693_10073263213300005547Corn, Switchgrass And Miscanthus RhizosphereRVHRNMEALEQVGIFDPLMMQVLNRQHEQLRAGANYHLLGAMRRIEERDRQRFAQPPNEEIPNP*
Ga0066704_1056196213300005557SoilRVHRNMAALEQVGIFDPLMMQTLNRQSEQLRAGANYHLLGAMRRVEERDREKFSQPPNEPQTPSSK*
Ga0068855_10024852123300005563Corn RhizosphereLTAVGIFDPLIMQMLNRQFETLRAGSNSHLLGAMRRIEERDRERFSQPPNELNP*
Ga0068855_10135193223300005563Corn RhizosphereVLLEQIGIFDPLMMQLLNRQSEAVRAGANSHLLGAMRRIEERDRERFSQPPNEQPS*
Ga0066702_1062190423300005575SoilARVHRNMVALEAVGIFDPLIMQTLNRQSEQLRAGANYHLLGAMRRIEERDRDRFSQLPNE
Ga0068856_10024190343300005614Corn RhizosphereLEQIGIFDPLMMQLLNRQSEAVRAGANSHLLGAMRRIEERDRERFSQSPNQLNS*
Ga0068856_10052949013300005614Corn RhizosphereALLEQIGIFDPLMMQLLNRQSESLRAGANSHLLGAMRRIEERDRERFSQPPNQLNS*
Ga0068856_10122045123300005614Corn RhizosphereYHAMAALEQVGIFDPLMMQTLNCQSEQLRAGANYHLLSAMRRIEERDRERFSQPPNE*
Ga0075282_100793433300005896Rice Paddy SoilAAFARVHRNMTALEGIGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRERFSQAPRE*
Ga0070717_1017348813300006028Corn, Switchgrass And Miscanthus RhizosphereNMEALEAVGIFDPLMMQVLNRQHEQLRAGANYHLLGAMRRIEERDRQRFSQPPNEEIPKP
Ga0079221_1089853113300006804Agricultural SoilMAALEEVGIFDPLMMQSLNRQSEQLRAGTNYHLLGAMRRIEERDRERFSQPPTEQTS*
Ga0075425_10062997423300006854Populus RhizosphereMTALEQAGIFDPLMMQVLNRQSEKLRAGANYHLLGTMRGIEERDRDKFSQPPGE*
Ga0075434_10057241433300006871Populus RhizosphereALEQAGIFDPLMMQVLNRQSEKLRAGANYHLLGTMRGIEERDRDKFSQPPGE*
Ga0079219_1135797433300006954Agricultural SoilLEQVGIFDPLIMQALNRQSEHLRAGANYHLLGAMRRVEERDRDRFSQPPNE*
Ga0079219_1174182723300006954Agricultural SoilFARVHRNMAALEQVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDREKFSQPPNE*
Ga0105240_1035524313300009093Corn RhizosphereLLYQLNEAFARVQRRIVLLEQIGIFDPLMMQMLNRQSETLRAGANCHLLGAMRRIEERDRERLSQPPNEQTS*
Ga0105245_1005203123300009098Miscanthus RhizosphereMEALEQVGIFDPLMMQALNRQHEKLRAGSNYHLLGAMRRIEERDRERFSQPPNEEIPNP*
Ga0105245_1055834913300009098Miscanthus RhizosphereMEALEQVGIFDPLMMQNLNRQHEQLRAGTNHHLLGAMRRIEERDRQRFSQPPNEEIPNS*
Ga0105241_1155420623300009174Corn RhizosphereMEALEQVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRQRFAQPPTGEIPNS*
Ga0105237_1036723113300009545Corn RhizosphereALEQVGIFDPLMMQVLNRQHEQLRAGVNYHLLGAMRRIEERDRQRFAQPPNEEIPSP*
Ga0105237_1060637113300009545Corn RhizosphereNAAFGRVHHAMAALEQVAIFDPLMMQTLNRQSEQLRAGANYHLLGAMRRIEERDRERFSQPPNE*
Ga0105237_1075161223300009545Corn RhizosphereNEAFARLQRRMALLEQIGIFDPLIMQMLNRQSEHLRAGANSHLLGAMRRIEERDRERLSQPPNEQTS*
Ga0105237_1213206213300009545Corn RhizosphereHRNMEALEQIGIFDLLMMQGLNRQHEKVRAGANYHLLGAMRRIEERDRERFSQPANEEILTT*
Ga0105238_1023435013300009551Corn RhizosphereDLLNRLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPTE*
Ga0105238_1027919713300009551Corn RhizosphereNAAFARVHRNMEALEQVGIFDPLMMQVLNRQHEQLRAGSNYHLLGAMRRIEERDRERFSQPHNEEIPNP*
Ga0134125_1078974733300010371Terrestrial SoilVGIFDPLIMQMLNRQLEPLRAGANSHLLGAMRRIEERDRERFSQPPNELNP*
Ga0134125_1087654323300010371Terrestrial SoilMAALTTVSIFDPLIMQMLNRQFEALRAGANSHLLGAMRRIEERDRERFSQPPNEPNP*
Ga0134125_1165709223300010371Terrestrial SoilALEQIGIFDPLMMQSLNRQSEQLRAGANYHLLGAMRRIEERDRQRFSQPPNEEIPNS*
Ga0134128_1023858613300010373Terrestrial SoilQIGIFDPLMMQLLNRQSEAVRAGANSHLLGAMRRIEERDRERFSQPPTEQNP*
Ga0134128_1026220313300010373Terrestrial SoilYQLNEAFARVQRRITLLEQIGIFDPLMMQLLNRQSEAVRAGANSHLLGAMRRIEERDRERFSQPPNEQNC*
Ga0134128_1195381913300010373Terrestrial SoilQIGIFDPLMMQLLNRQSESLRAGANSHLLGAMRRIEERDRERFSQPPNELNP*
Ga0134126_1242873123300010396Terrestrial SoilHVYDLLYQLNEAFARLQRRMALLEQIGIFDPLMMQMLNRQSETVRAGANCHLLGAMRRIEERDRERFSQPPNEQNP*
Ga0134124_1093634023300010397Terrestrial SoilHRNMLLLEKAGIFDPLMMQVLNRQSQRLRAGANYHLLGTLRGIEERDRERFGQLPNEQDC
Ga0134124_1178054223300010397Terrestrial SoilVYDLLNRLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPTE*
Ga0137437_125309913300011442SoilLNRLNASFARVHRNMEALEQVGIFDPLMMQVLNRQSEQLRAGVNYHLLGAMRRIEERDRERFSQPPNEETPNP*
Ga0137363_1001170843300012202Vadose Zone SoilVFLNAAFRVDRNMAALWQVGIFDPLMMQILNRKLEKLRAGVSYHLLGAMRGIEERDR*
Ga0137363_1005308113300012202Vadose Zone SoilMEALEQAGIFDRLMMQVLNRQSEKLRAGANYHLLGTMRCIEERDRERFSQPPNEQNSST*
Ga0137386_1064974213300012351Vadose Zone SoilMEEVDIFDPLMMQVLNRQSEQLRAGANYHLLGARRRVEERDRQRFSEPPKE*
Ga0150984_10797676123300012469Avena Fatua RhizosphereMEALEQIGIFDPLMMQSLNRQSDQLQAGANYHLLGAMRRIEERDRERFSQ
Ga0137395_1057909923300012917Vadose Zone SoilMAALEAVGIFDPLMMQALNRQSEQLRAGANYHLLGAMRRIEERDRERFSQPPNELNS*
Ga0137359_1099529213300012923Vadose Zone SoilMEALEQAGIFDRLMMQVLNRQSEKLRAGANYHLLGTIRCIEERDRERFSQPPNEQNSST*
Ga0164303_1031713233300012957SoilLNAAFARVHRNMEALEQVGIFDPLMMQGLNRQHEKVRAGANYHLLGAMRRIEERDRERFSQPPNEEIPNT*
Ga0164303_1034436913300012957SoilAALAQVGIFDPLMMQLLNRQSETLWAGANYHLLGTMRGIEERDRERFSQPPNEQNT*
Ga0164299_1047385133300012958SoilFARVRHNMAALEQAGIFDPLMMQVLSRQHEKLRAGVNCHLLGAMRRIEERDRERFSQPPNEEIPHS*
Ga0164299_1138606023300012958SoilRVHRNMEALEQVGIFDPLMMQVLNRQHEQLRAGVNYHLLGAMRRIEERDRQRFAQPPNEEIPNP*
Ga0164301_1016821213300012960SoilNRLNAAFARVHRNMEALEAVGIFDPLMMQSLNRQHEKLRAGVNCHLLGAMRRIEERDRERYSQPPNEESPNP*
Ga0164301_1130291113300012960SoilMEALQAVGIFDPLMMQNLNRQHEQVRAGANYHLLGAMRRIEERDRDRFSQPPNE*
Ga0153916_1207884413300012964Freshwater WetlandsMAEDADLLNRLNAAFARVHRNMETLEEAGIFDPLMMQALNRQSEQLRAGANYHLLGAMRRFEERDRERFSQLPKQ*
Ga0164309_1009786913300012984SoilRVHRNMVALEQVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRDKFSQPPNE*
Ga0164309_1117588223300012984SoilMAALEQVGIFDPLVMQVLNRQSETLRAGANYHLLGTMRDIEERDRKKFSQPPSK*
Ga0164304_1006205213300012986SoilHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0164307_1103201423300012987SoilNRLNAAFARVHRNMEALEQVGIFDPLMMQALNRQHEKLRAGSNYHLLGAMRRIEERDRERFSPPPNEEIPNP*
Ga0164306_1023007523300012988SoilMAALEQAGIFDPLMMQSLNRQHEKLRAGANCHLLGAMRRIEERDRERFSQPPNEETPNP*
Ga0164306_1024918933300012988SoilDLLHRLNASFARVHHNMAALERVGIFDPLMMQLLNRQHEKLRAGANYHLLGAMRGIEERDREKFSQPPNE*
Ga0164306_1085018113300012988SoilRLNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPK*
Ga0164305_1031825523300012989SoilHRNMEALEAVGIFDPLMMQVLNRQHEQLRAGVNYHLLGAMRRIEERDRQRFAGSGPVEKLDH*
Ga0164305_1143001213300012989SoilRVHRNMVALEQVGIFDPLMMQNLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0164305_1143488713300012989SoilLEALEQIGIFDPLMMQALNRQHEKVRAGANYHLLGAMRRIEERDRERFSQPANEEIPTP*
Ga0157369_1001084293300013105Corn RhizosphereMAALEQVGIFDPLMMQALNRQHEHLRAGANYHLLGAMRRIEERDREKFSQPPNE*
Ga0157369_1011152713300013105Corn RhizosphereRDHRNMEALEQIGIFDLLMMQGLNRQHEQVRAGANYHLLGAMRRIEERDRERFSQPANEEILTT*
Ga0157369_1017342133300013105Corn RhizosphereAMAALEQVGIFDPLMMQTLNRQSEQLRAGANYHLLSAMRRIEERDRERFSQPPNE*
Ga0157369_1063201523300013105Corn RhizosphereLLEQIGIFDPLMMQLLNRQSETLRAGANSHLLGAMRRIEERDRERFSQPPTEQNP*
Ga0157374_1137919923300013296Miscanthus RhizosphereLNRLNAAFARVHRNMEALEAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRDRLSQTPSE*
Ga0163162_1069112613300013306Switchgrass RhizosphereARVHRNMEALEQIGIFDPLMMQTLNRQSEKLRAGVNHHLLGAMRRIEERDRDRFSQPPNEETTNP*
Ga0157372_1102461723300013307Corn RhizosphereLAQVGIFDPLIMQMLNRQLEPLRAGANSHLLGAMRRIEERDRERFSQPPNELNP*
Ga0157372_1140811923300013307Corn RhizosphereYDLLYQLNEAFVRVQRRIALLEQIGIFDPLMMQMLNRQSETVRAGANCHLLGAMRRIEERDRERFSQPLTE*
Ga0157372_1205370323300013307Corn RhizosphereEQVGIFDPLMMQSLNRQSEKLRAGVNCHLLGAMRRIEERDRERYSQPPNEETQNT*
Ga0157379_1185597913300014968Switchgrass RhizosphereNRLNAAFARVHRNMEALEQIGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDRERFSQPHNEEIPNP*
Ga0157376_1240598313300014969Miscanthus RhizosphereHRLNASFARVRHNMAALEQAGIFDPLMMQSLNRQHEKLRAGANCHLLGAMRRIEERDRERFSQPPNEGTPNP*
Ga0137409_1032227613300015245Vadose Zone SoilHRNMEALEQIGIFDPLMMQVLNRQSEQLRAGANYHLLGAMRRIEEHDRDRFSQPPSEKNS
Ga0137403_1011853323300015264Vadose Zone SoilMAALEEVGIFDPLMMQVLNRQSEQLRAGANYHLLGAMRRIEERDRQRFAQPPNELNS*
Ga0132258_1249196133300015371Arabidopsis RhizosphereRLNASFARVHRNMTALEQVGIFDPLMMQVLNRQSEKLRAGANYHLLGTMRGIEERDRDKFSQPPGE*
Ga0206356_1077193513300020070Corn, Switchgrass And Miscanthus RhizosphereLYKIHFAAFARVHHKMAALAQVGIFDPLIMQMLNRQLEPLREGSNSHLLGAMRRIEERDRERFSQPPNEPNP
Ga0207692_1012488213300025898Corn, Switchgrass And Miscanthus RhizosphereALEAVGIFDPLMMQVLNRQHEQLHAGVNYHLLGAMRRIEERDRQRFAQPPNEEIPNP
Ga0207692_1077098723300025898Corn, Switchgrass And Miscanthus RhizosphereAAFARVHRNMEALQAVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRVEERDRERFSQPPNE
Ga0207685_1011388923300025905Corn, Switchgrass And Miscanthus RhizosphereMVALEQVGIFDPLIMQALNRQSEHLRAGANYHLLGAMRRVEERDRDRFSQPPNE
Ga0207699_1142745713300025906Corn, Switchgrass And Miscanthus RhizosphereNASFARVHRNMAALEAVGIFDPLMMQKLNRQSEQLRAGANYHLLGAMRRIEERDRERFSQPPNE
Ga0207707_1058152913300025912Corn RhizosphereFARVHRNMAALEQVGIFDPLMMQTLNRQSEQLRAGANYHLLGAMRRVEERDRERFSQPPK
Ga0207671_1069519213300025914Corn RhizosphereHRNMEALEQVGIFDPLMMQALNRQHEKLRAGSNYHLLGAMRRIEERDRERFSQPPNEEIPNP
Ga0207693_1076241713300025915Corn, Switchgrass And Miscanthus RhizosphereRHNMAALEQAGIFDPLMMQSLNRQHEKLRAGANCHLLGAMRRIEERDRERFSQPPNEGTPNP
Ga0207663_1128087223300025916Corn, Switchgrass And Miscanthus RhizosphereSFARVHRNMVALEQVGIFDPLMIQNLNRQSEQLRAGANYHLLGAMRRIEERDREKFSGSGSVEKLDH
Ga0207652_1060746733300025921Corn RhizosphereNAAFARVHRNMEALEQVGIFDPLMMQGLNRQHEKVRAGANYHLLGAMRRIEERDRERFSQPQPNEEIPTT
Ga0207652_1063232523300025921Corn RhizosphereRLNASFARVHHNMAALEQVGIFDPLMMQALNRQHEHLRAGANYHLLGAMRRIEERDREKFSQPPNE
Ga0207694_1084322323300025924Corn RhizosphereHRNMEALEQVGIFDPLMMQVLNRQHEQLRAGSNYHLLGAMRRIEERDRERFSQPHNEEIPNP
Ga0207700_1107022613300025928Corn, Switchgrass And Miscanthus RhizosphereVGIFDPLMMQGLNRQHEKLRAGANYHLLGAMRRIEERDRERFSQPPNEEIPTT
Ga0207700_1112686823300025928Corn, Switchgrass And Miscanthus RhizosphereLLNNLNASFARVHRNMEALEKVGIFDPLMMQTLNRQSEHLRAGVNCHLLGAMRRIEERDRERFSHPPNQEIPNS
Ga0207700_1113883323300025928Corn, Switchgrass And Miscanthus RhizosphereVHRNMEALEQVGIFDPLMMQAINRQHEKLRAGANYHLLGAMRRIEERDRERFSQPPNEDIPTT
Ga0207700_1194628513300025928Corn, Switchgrass And Miscanthus RhizosphereNAAFARVHRNMEALEQVGIFDPLMMQSLNRQSEHLRAGANYHLLGAMRRIEERDREKFSQPPTE
Ga0207667_1075428413300025949Corn RhizosphereMALFEQIGIFDPLMMQMLNRQSEHLRAGANSHLLGAMRRIEERDRERFSQPPNEQPS
Ga0207639_1006049333300026041Corn RhizosphereVYDLLNRLNAAFARVHRNMEALEQIGIFDPLMMQALNRQHEKVRAGANYHLLGAMRRIEERDRERFSQPANEEILTT
Ga0207702_1169311023300026078Corn RhizosphereNEAFARVQRRITLLEQIGIFDPLMMQLLNRQSEAVRAGANTHLLGAMRRIEERDRERFSQPPTEQNP
Ga0207702_1184534813300026078Corn RhizosphereLEQTGIFDPLMMQMLNRQSETVRAGANCHLLGAMRRIEERDREHFSQPLTE
Ga0207702_1209190113300026078Corn RhizosphereFARVHRNMEALEQVGIFDPLMMQVLNRQSEHLRAGANYHLLGAMRRIEERDREKFSSSGSIEKLDH
Ga0209166_1014778223300027857Surface SoilMSALEAIGIFDPLMMQTLNRQSEQLRAGANYHLLGAMRRIEERDRERFSQQPHE
Ga0310813_1240614913300031716SoilPHVYDLLHRLNASFARVHRNMEALEQVGIFDPLMMQNLNRQSEQLRAGANYHLLGAMRRIEERDREKFSGRRS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.