Basic Information | |
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Family ID | F076098 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 118 |
Average Sequence Length | 45 residues |
Representative Sequence | VTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Number of Associated Samples | 97 |
Number of Associated Scaffolds | 118 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 83.05 % |
Associated GOLD sequencing projects | 94 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (76.271 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (16.102 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.153 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (70.339 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.47% β-sheet: 0.00% Coil/Unstructured: 39.53% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater Lake Sediment Freshwater Aquatic Freshwater Freshwater Aqueous Estuary Water Estuarine Estuarine Estuarine Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0049081_100743514 | 3300005581 | Freshwater Lentic | SEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPM* |
Ga0049080_102176751 | 3300005582 | Freshwater Lentic | TNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM* |
Ga0049082_101522323 | 3300005584 | Freshwater Lentic | PVTNYDSEAFASNHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0078894_104643995 | 3300005662 | Freshwater Lake | FDSNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0078894_109406303 | 3300005662 | Freshwater Lake | DSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0078894_112746561 | 3300005662 | Freshwater Lake | QFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0079957_11327921 | 3300005805 | Lake | VGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLIFSLNIELKYKHNKKLPQ* |
Ga0079957_12066234 | 3300005805 | Lake | VGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0070743_101699844 | 3300005941 | Estuarine | NGGGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0070744_100042311 | 3300006484 | Estuarine | EAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0075471_102302161 | 3300006641 | Aqueous | GIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0075473_101284391 | 3300006875 | Aqueous | FQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNRIKMLP* |
Ga0102874_10043481 | 3300007546 | Estuarine | TNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0102918_100616610 | 3300007593 | Estuarine | ASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0102919_11717561 | 3300007597 | Estuarine | NGGGLFVGIRFQFPVTNYNIEAFASKHTYTCLRLTLGLLVISINVEVKYNYIKMLPQ* |
Ga0102863_11495501 | 3300007622 | Estuarine | ASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0102901_100466713 | 3300007634 | Estuarine | SEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0102865_12713251 | 3300007639 | Estuarine | QWHCKNGGGLFVGIRFQFPVTNYDSEAFASKHTYTCLRLTLGLLVISINVEVKYNYIKMLPQ* |
Ga0102898_10460475 | 3300007658 | Estuarine | CKNGGGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0105745_10958404 | 3300007972 | Estuary Water | DSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM* |
Ga0105746_11569601 | 3300007973 | Estuary Water | YDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0105747_13212642 | 3300007974 | Estuary Water | FPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVELKYNYIKMLPQ* |
Ga0105748_100369566 | 3300007992 | Estuary Water | EAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM* |
Ga0102922_11959351 | 3300008021 | Estuarine | FASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0102893_12481511 | 3300008052 | Estuarine | QWHCKNGGGLFVGIQFQFPVANYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114340_11116691 | 3300008107 | Freshwater, Plankton | VTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYSKMLPQ* |
Ga0114340_11728221 | 3300008107 | Freshwater, Plankton | VTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYSKMLPQ* |
Ga0114340_11874411 | 3300008107 | Freshwater, Plankton | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0114350_10707421 | 3300008116 | Freshwater, Plankton | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPR* |
Ga0114350_11382441 | 3300008116 | Freshwater, Plankton | GGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114355_11413561 | 3300008120 | Freshwater, Plankton | AFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114841_12591271 | 3300008259 | Freshwater, Plankton | DAEAFASKHTYTRLRLTFGLIVFSINVDIKYNHIKMLPM* |
Ga0114336_12593643 | 3300008261 | Freshwater, Plankton | FVGIRFQFPVTNYDSEAFDSNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM* |
Ga0114364_11320711 | 3300008267 | Freshwater, Plankton | VTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114364_11474451 | 3300008267 | Freshwater, Plankton | IRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0114364_11606371 | 3300008267 | Freshwater, Plankton | GIRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINAEVKYNYSKMLPQ* |
Ga0114876_11952011 | 3300008448 | Freshwater Lake | IRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYSKMLPQ* |
Ga0114880_12093814 | 3300008450 | Freshwater Lake | FPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114973_101577501 | 3300009068 | Freshwater Lake | VTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114980_100595791 | 3300009152 | Freshwater Lake | TNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114968_100951931 | 3300009155 | Freshwater Lake | FVGIRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0114968_101693071 | 3300009155 | Freshwater Lake | FVGIRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114977_104998554 | 3300009158 | Freshwater Lake | FQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0114978_105915973 | 3300009159 | Freshwater Lake | FVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0114966_105264371 | 3300009161 | Freshwater Lake | NYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNRIKMFPQ* |
Ga0114970_105110501 | 3300009163 | Freshwater Lake | AFASKHTYSCLRLTLGLLVFSINVDVKYNRIKMFPQ* |
Ga0114970_105603511 | 3300009163 | Freshwater Lake | LFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114975_100098441 | 3300009164 | Freshwater Lake | FASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114974_103698831 | 3300009183 | Freshwater Lake | YDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114976_106575452 | 3300009184 | Freshwater Lake | LFLGIRLQFPVTNYDSEAFASKHTYTCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114971_101793141 | 3300009185 | Freshwater Lake | FPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0114972_100921118 | 3300009187 | Freshwater Lake | NYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ* |
Ga0133913_116371835 | 3300010885 | Freshwater Lake | DSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0139557_10016711 | 3300011010 | Freshwater | IRFQFPVTNYDSEAFASKHTYTCLRLTLGLLVFSINVDVKYNRIKMLPQ* |
Ga0139557_10714451 | 3300011010 | Freshwater | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0177922_105324583 | 3300013372 | Freshwater | FVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0177922_112964481 | 3300013372 | Freshwater | FQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINLDIKYNYIKTLPQ* |
Ga0119960_10955262 | 3300014811 | Aquatic | VSQSRSGGGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ* |
Ga0181365_11007391 | 3300017736 | Freshwater Lake | QFPVSIYDSEAFASKHTYTCLRLTLGLLAISINVEVKYNYIKMLPQ |
Ga0181343_10288685 | 3300017766 | Freshwater Lake | RFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNHSKMLPQ |
Ga0181346_12455121 | 3300017780 | Freshwater Lake | FPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0181355_11274231 | 3300017785 | Freshwater Lake | DSEAFASRHTYTCLRLTLGLLVISINLDIKYNYIKTLPQ |
Ga0211734_104708441 | 3300020159 | Freshwater | FFGIRLDFPTEIYDSEAFASKHTYTRLRLTFGLIVCSVKVDIKYNYIKMLPI |
Ga0211729_106656836 | 3300020172 | Freshwater | IRLDFPTEIYDSEAFASKHTYTRLRLTFGLIVCSVKVDIKYNYIKMLPI |
Ga0208487_10088751 | 3300020531 | Freshwater | AFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0207941_10242703 | 3300020539 | Freshwater | TNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0208857_10409841 | 3300020542 | Freshwater | VTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0208465_10385951 | 3300020570 | Freshwater | DIEAIDKHTYACLRLTLGLLVFSVNIDIKYNRIKMLPQ |
Ga0214163_100145025 | 3300021141 | Freshwater | PVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ |
Ga0214163_100737011 | 3300021141 | Freshwater | PVTNYDSEAFASKHTYSCLRLTLGLLVFSINVELKYNYIKMLPQ |
Ga0222714_103408464 | 3300021961 | Estuarine Water | NYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYSKMLPQ |
Ga0222712_104175091 | 3300021963 | Estuarine Water | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNRIKMLPQ |
Ga0181351_10152591 | 3300022407 | Freshwater Lake | SEAFDSNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0181351_11543241 | 3300022407 | Freshwater Lake | NGGGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0214921_100655709 | 3300023174 | Freshwater | PVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPR |
Ga0214923_102551461 | 3300023179 | Freshwater | EAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0214923_103616051 | 3300023179 | Freshwater | TNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPR |
Ga0214919_102658711 | 3300023184 | Freshwater | VTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPR |
Ga0244775_105566633 | 3300024346 | Estuarine | DSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0256309_11134523 | 3300024566 | Freshwater | IEAIDKHTYACLRLTLGLLVFSINVDIKYNRIKMLPQ |
Ga0256307_11570433 | 3300024567 | Freshwater | FQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNRIKMLLQ |
Ga0255090_10169341 | 3300027123 | Freshwater | YDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0255090_10531681 | 3300027123 | Freshwater | TNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNHSKMLPQ |
Ga0255098_10508673 | 3300027126 | Freshwater | FASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255066_10054458 | 3300027131 | Freshwater | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255066_10431911 | 3300027131 | Freshwater | TNYDIEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255069_10074431 | 3300027134 | Freshwater | NYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0255069_10280464 | 3300027134 | Freshwater | TNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255065_10658851 | 3300027142 | Freshwater | SEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0208922_10441941 | 3300027197 | Estuarine | GGLFVGIRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0208928_10563931 | 3300027217 | Estuarine | AFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0208806_10072141 | 3300027242 | Estuarine | YDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0208931_10045401 | 3300027246 | Estuarine | YDIEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255127_10750731 | 3300027301 | Freshwater | FPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ |
Ga0208811_10032891 | 3300027314 | Estuarine | NYDIEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255094_10309385 | 3300027494 | Freshwater | NYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255072_100506210 | 3300027508 | Freshwater | FASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255088_10704533 | 3300027597 | Freshwater | NYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0255088_10750241 | 3300027597 | Freshwater | EAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0208975_10587261 | 3300027659 | Freshwater Lentic | EAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0209296_12764814 | 3300027759 | Freshwater Lake | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ |
Ga0209086_101098351 | 3300027770 | Freshwater Lake | NYDSEAFASNHTYSCLRFTLGLLVFSINVEVKYNYIKMLPQ |
Ga0209086_104441821 | 3300027770 | Freshwater Lake | EAFASKHTYSCLRLTLGLLVFSINVEVKYNRIKMFPQ |
Ga0209768_102773873 | 3300027772 | Freshwater Lake | YDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0209829_104046742 | 3300027777 | Freshwater Lake | GGLFVGIRCQFPARIYDSEAFADKHTYTCLRLTLGLLVFSINVDVKYNHIKMLPQ |
Ga0209246_102433833 | 3300027785 | Freshwater Lake | VTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0209358_1000642724 | 3300027804 | Freshwater Lake | IRFQFPVTNYDSEAFASNHTYSCLRLTLGLLVFSINVEVKYNHSKMLPQ |
Ga0209990_104983372 | 3300027816 | Freshwater Lake | GCRLDFPASIYDAEAFASKHTYTRLRLTFGLIVFSINVDIKYNHIKMLPM |
Ga0315909_104826761 | 3300031857 | Freshwater | QFPVTNYDSEAFDSNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0315901_105552234 | 3300031963 | Freshwater | SEAFASNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0315902_101810237 | 3300032093 | Freshwater | VTNYDSEAFDSNHTYSCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0315902_105069985 | 3300032093 | Freshwater | NYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPM |
Ga0315268_123038013 | 3300032173 | Sediment | PVTNYDSEAFASKHTYTCLRLTLGLLVFSINVEVKYNYIKMLPQ |
Ga0334982_0316963_1_165 | 3300033981 | Freshwater | LFVGIRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVEVKYNYIKMLPPQ |
Ga0334996_0038719_2869_3012 | 3300033994 | Freshwater | FQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ |
Ga0334985_0672637_2_148 | 3300034018 | Freshwater | IRLQFPKIIYDIEAIDKHTYACLRLTLGLLVFSVNIDIKYNRIKMLPQ |
Ga0335054_0547912_2_139 | 3300034119 | Freshwater | FPKIIYDIEAFASKHTYSCLRLTLGLLVFSINVDIKYNRIKMLPQ |
Ga0335060_0096124_3_164 | 3300034122 | Freshwater | LFVGIRFQFPVTNYDSEAFASKHTYSCLRLTLGLLVFSINVDVKYNYIKMLPQ |
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