Metagenome / Metatranscriptome Family F076151

Basic Information
Family ID	F076151
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	40 residues
Representative Sequence	VSASVLKTSVNSKSPEFEKNARRIVDLLTKIKNEEEQIRQ
Number of Associated Samples	103
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.46 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (68.644 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.966 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.695 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.76% β-sheet: 0.00% Coil/Unstructured: 63.24%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF03193	RsgA_GTPase	9.32
PF02310	B12-binding	9.32
PF00675	Peptidase_M16	7.63
PF12779	WXXGXW	4.24
PF13480	Acetyltransf_6	3.39
PF05193	Peptidase_M16_C	3.39
PF00144	Beta-lactamase	3.39
PF01642	MM_CoA_mutase	1.69
PF00583	Acetyltransf_1	1.69
PF07110	EthD	1.69
PF13366	PDDEXK_3	0.85
PF13620	CarboxypepD_reg	0.85
PF07715	Plug	0.85
PF00034	Cytochrom_C	0.85
PF11954	DUF3471	0.85
PF13689	DUF4154	0.85
PF00375	SDF	0.85
PF00156	Pribosyltran	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	9.32
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.39
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.39
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.39
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	1.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.85 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.85 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Candidatus Aminicenantes bacterium RBG_13_63_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_63_10	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	0.85 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Oxalobacteraceae bacterium IMCC9480	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium IMCC9480	0.85 %
Vibrio coralliilyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio coralliilyticus	0.85 %
Candidatus Aminicenantes bacterium RBG_13_63_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_63_10	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10135007	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300002912\|JGI25386J43895_10121902	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300004082\|Ga0062384_100301793	Not Available	995	Open in IMG/M
3300004479\|Ga0062595_101987120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio coralliilyticus	561	Open in IMG/M
3300005332\|Ga0066388_108429306	Not Available	513	Open in IMG/M
3300005468\|Ga0070707_101167892	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005529\|Ga0070741_10903620	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005537\|Ga0070730_10915605	Not Available	549	Open in IMG/M
3300005574\|Ga0066694_10139566	Not Available	1146	Open in IMG/M
3300006050\|Ga0075028_100999680	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006354\|Ga0075021_11073995	Not Available	526	Open in IMG/M
3300006755\|Ga0079222_11351015	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006794\|Ga0066658_10924962	Not Available	504	Open in IMG/M
3300006804\|Ga0079221_11513099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300007255\|Ga0099791_10474445	Not Available	606	Open in IMG/M
3300007265\|Ga0099794_10362227	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009012\|Ga0066710_100127499	All Organisms → cellular organisms → Bacteria → Acidobacteria	3485	Open in IMG/M
3300009038\|Ga0099829_10260530	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300009088\|Ga0099830_11869303	Not Available	502	Open in IMG/M
3300009090\|Ga0099827_10169588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1798	Open in IMG/M
3300009090\|Ga0099827_11035156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300010325\|Ga0134064_10500979	Not Available	504	Open in IMG/M
3300010358\|Ga0126370_12232676	Not Available	540	Open in IMG/M
3300010360\|Ga0126372_10041834	All Organisms → cellular organisms → Bacteria → Acidobacteria	3009	Open in IMG/M
3300010366\|Ga0126379_10010140	All Organisms → cellular organisms → Bacteria → Acidobacteria	6574	Open in IMG/M
3300010366\|Ga0126379_13631385	Not Available	517	Open in IMG/M
3300010401\|Ga0134121_12992226	Not Available	520	Open in IMG/M
3300011269\|Ga0137392_10286101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300012096\|Ga0137389_10202018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1655	Open in IMG/M
3300012202\|Ga0137363_10513726	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012203\|Ga0137399_10432491	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012205\|Ga0137362_10510903	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300012205\|Ga0137362_11529904	Not Available	554	Open in IMG/M
3300012206\|Ga0137380_10188878	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300012206\|Ga0137380_10481120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300012685\|Ga0137397_10254621	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300012918\|Ga0137396_11158955	Not Available	548	Open in IMG/M
3300012923\|Ga0137359_10211171	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300012929\|Ga0137404_10436725	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300012930\|Ga0137407_11266588	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012931\|Ga0153915_11616639	Not Available	758	Open in IMG/M
3300015054\|Ga0137420_1146504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300015242\|Ga0137412_10002292	All Organisms → cellular organisms → Bacteria	15122	Open in IMG/M
3300016319\|Ga0182033_11009759	Not Available	740	Open in IMG/M
3300016341\|Ga0182035_10626328	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300016445\|Ga0182038_10115907	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300017924\|Ga0187820_1007487	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300017955\|Ga0187817_10084435	Not Available	1987	Open in IMG/M
3300017970\|Ga0187783_10120827	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300018090\|Ga0187770_10124993	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300018433\|Ga0066667_10899692	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300018482\|Ga0066669_11529355	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300020580\|Ga0210403_11091634	Not Available	620	Open in IMG/M
3300020580\|Ga0210403_11230466	Not Available	575	Open in IMG/M
3300020581\|Ga0210399_10052242	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300021086\|Ga0179596_10483272	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021168\|Ga0210406_11137675	Not Available	572	Open in IMG/M
3300021178\|Ga0210408_10533905	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300021181\|Ga0210388_10585875	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300021401\|Ga0210393_10071737	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300021401\|Ga0210393_10290817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300021401\|Ga0210393_11288020	Not Available	586	Open in IMG/M
3300021405\|Ga0210387_11674448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300021406\|Ga0210386_10854558	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300021407\|Ga0210383_10084124	All Organisms → cellular organisms → Bacteria → Acidobacteria	2667	Open in IMG/M
3300021420\|Ga0210394_10387070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300021420\|Ga0210394_10858114	Not Available	791	Open in IMG/M
3300021433\|Ga0210391_11248886	Not Available	574	Open in IMG/M
3300021474\|Ga0210390_10403462	All Organisms → cellular organisms → Bacteria → Acidobacteria	1155	Open in IMG/M
3300021477\|Ga0210398_11110079	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300021478\|Ga0210402_11443098	Not Available	615	Open in IMG/M
3300021560\|Ga0126371_13125443	Not Available	560	Open in IMG/M
3300024290\|Ga0247667_1007369	All Organisms → cellular organisms → Bacteria → Acidobacteria	2285	Open in IMG/M
3300025927\|Ga0207687_10464890	All Organisms → cellular organisms → Bacteria → Acidobacteria	1051	Open in IMG/M
3300025934\|Ga0207686_10570422	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300026298\|Ga0209236_1028379	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300026314\|Ga0209268_1005427	All Organisms → cellular organisms → Bacteria	5602	Open in IMG/M
3300026318\|Ga0209471_1316774	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026499\|Ga0257181_1019431	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300026499\|Ga0257181_1021015	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300026507\|Ga0257165_1063723	Not Available	670	Open in IMG/M
3300026514\|Ga0257168_1078939	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300026538\|Ga0209056_10375437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium IMCC9480	906	Open in IMG/M
3300026542\|Ga0209805_1404204	Not Available	526	Open in IMG/M
3300026551\|Ga0209648_10316186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300026557\|Ga0179587_10758083	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026557\|Ga0179587_11168575	Not Available	506	Open in IMG/M
3300026983\|Ga0207856_1055136	Not Available	510	Open in IMG/M
3300027023\|Ga0207736_112411	Not Available	511	Open in IMG/M
3300027643\|Ga0209076_1134332	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300027671\|Ga0209588_1171367	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_13_63_10	683	Open in IMG/M
3300027882\|Ga0209590_10599325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300027882\|Ga0209590_10649142	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300028536\|Ga0137415_10118458	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300028536\|Ga0137415_10433956	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300028536\|Ga0137415_10564844	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300028536\|Ga0137415_11064173	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300029636\|Ga0222749_10077874	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300031057\|Ga0170834_105185474	Not Available	630	Open in IMG/M
3300031231\|Ga0170824_128208270	Not Available	677	Open in IMG/M
3300031715\|Ga0307476_10843021	Not Available	677	Open in IMG/M
3300031763\|Ga0318537_10122871	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300031823\|Ga0307478_11777202	Not Available	507	Open in IMG/M
3300031879\|Ga0306919_10283447	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300031897\|Ga0318520_10020987	All Organisms → cellular organisms → Bacteria	3112	Open in IMG/M
3300031897\|Ga0318520_10237443	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031941\|Ga0310912_10972853	Not Available	651	Open in IMG/M
3300031942\|Ga0310916_11183518	Not Available	632	Open in IMG/M
3300031945\|Ga0310913_10171819	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300031946\|Ga0310910_11067242	Not Available	630	Open in IMG/M
3300031947\|Ga0310909_10220914	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300031962\|Ga0307479_11279928	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300032076\|Ga0306924_10518857	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300032180\|Ga0307471_102594545	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300032205\|Ga0307472_101079739	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300032261\|Ga0306920_100359284	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300032955\|Ga0335076_10044360	All Organisms → cellular organisms → Bacteria	4428	Open in IMG/M
3300033289\|Ga0310914_10526698	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.31%
Host-Associated	Host-Associated	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.22%
Aquatic	Environmental → Aquatic	5.08%
Plants	Host-Associated → Plants	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.22%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Sediment	Environmental → Aquatic → Sediment	1.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.39%
Loam	Environmental → Terrestrial → Soil → Loam	3.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300027023	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101350072	3300002558	Grasslands Soil	VSDSVLKTSANRKSPEFERNSRRIVDLLTKIKNEEEQIRQGGGEK
JGI25386J43895_101219022	3300002912	Grasslands Soil	VSDSVLKTSANRKSPEFERNSRRIVDLLTKIKNEEEQIRQ
Ga0062384_1003017931	3300004082	Bog Forest Soil	VSASVLKTSVNKKSPEFEKNTRKVIDLVTQIKNEEEQISRGGG
Ga0062595_1019871201	3300004479	Soil	VAASVLKTSAKAKSPDFEKNHRRIIDLLTKIKNEEEQIRQGGG
Ga0066388_1084293062	3300005332	Tropical Forest Soil	VSSSVLKTSVNSKAPQYDKNADRMTDLLTEIKNQEEKIREG
Ga0070707_1011678922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSASVLKTSVNSKSPEFEKNARRIVDLLTKIKNEEETIRQG
Ga0070741_109036202	3300005529	Surface Soil	VTASILKTTAKPKSPEFEKNSRRIVELLTEIKNEEEQI
Ga0070730_109156051	3300005537	Surface Soil	VPASTLSSNVNRKSPDFEKNTRRIIELLTQIKNEE
Ga0066694_101395663	3300005574	Soil	VSAPVLKTAANRKSPDFEKNTRRIIDLLTEIKNEEEQ
Ga0075028_1009996802	3300006050	Watersheds	VPDSVLKTSANRKSPEFEKNARRIVDLLTKIKNEEEQIRQGGGVK
Ga0075021_110739952	3300006354	Watersheds	VSSSVLKTDVNPKSPQFEKNTRQMSELLTEIKNEEVQLR
Ga0079222_113510152	3300006755	Agricultural Soil	VSASVLKTTANLKSPEFEKNTRHIVDLLTKIKNEEEQIRQGGG
Ga0066658_109249622	3300006794	Soil	VSASVLKTSANRKSPEFEKNARRVADLLTIIKNEE
Ga0079221_115130992	3300006804	Agricultural Soil	VSASVLKTAANRKSPEFEKNTRRMIDLLTEIKNEEEQIRQG
Ga0099791_104744452	3300007255	Vadose Zone Soil	VSASVLKTSVNLKSPEFEKNARRIVDLLTKIKNEEEQIRQGGG
Ga0099794_103622271	3300007265	Vadose Zone Soil	VAASTLKTIVNTKSPEFEKNTRRMIDLVTQIKNEEEQIFQGGGAK
Ga0066710_1001274994	3300009012	Grasslands Soil	VSGSVLKTAANRKSPEFEKNTRRIVDLLTEIKNEEEEIRQ
Ga0099829_102605302	3300009038	Vadose Zone Soil	VSASVLKTSANLKSPEFEKNARRIVDLLTKIKNEEEQIREGG
Ga0099830_118693031	3300009088	Vadose Zone Soil	VAASALKTNVNTKSPEFEKNTRRMIDLVTQIKNEEEQIQQG
Ga0099827_101695881	3300009090	Vadose Zone Soil	VSDSVLKTSANLKSPEFEKNARRIVDLLTRIKNEEEQ
Ga0099827_110351562	3300009090	Vadose Zone Soil	VSASVLKTSANRKSPEFEKNTRRIVDLLTEIKNEEE
Ga0134064_105009792	3300010325	Grasslands Soil	VNRKSPDFEKNTRRIIDLLTQIKNEEQKIREGGGAKALES
Ga0126370_122326761	3300010358	Tropical Forest Soil	VSSSALKTAANRKSPDFEKNTRRIVDLLSQIKNEEEQIRQGGG
Ga0126372_100418344	3300010360	Tropical Forest Soil	VPASTLSSNVNRKSPDFEKNTRRIIELLTQIKNEEQKIREGGGA
Ga0126379_100101401	3300010366	Tropical Forest Soil	VSASVLKTSANPNSPQFEKNARQMADLLTMIKNEEETIRE
Ga0126379_136313851	3300010366	Tropical Forest Soil	VSSSVLKTSVNSKAPQYDKNADRMTDLLTEIKNEE
Ga0134121_129922261	3300010401	Terrestrial Soil	VPASVLKTAVNTKSPDFAKNSRKVVDLVTQIKNEETQIAQGGGAKAIE
Ga0137392_102861013	3300011269	Vadose Zone Soil	VSDSVLKTNANRKSPEFEKNARRIVDLLTKIKNEEEQIRQGG
Ga0137389_102020182	3300012096	Vadose Zone Soil	VSDSVLKTSANLKSPEFEKNARRIVDLLTKIKNEEEQIFQ
Ga0137363_105137263	3300012202	Vadose Zone Soil	VSSSVLKTAINAKSPDFEKNSQRMVELLTTIKNEEEKIRQ
Ga0137399_104324912	3300012203	Vadose Zone Soil	VSVSVLKTSANRKSPEFEKNARRIVDLLTEIKNEE
Ga0137362_105109031	3300012205	Vadose Zone Soil	VSASVLKTSVNSKSPEFEKNARRIVDLLTKIKNEEEQIRQ
Ga0137362_115299041	3300012205	Vadose Zone Soil	VPDSVLKTSTSLKSPEFEKNARRIVDLLTKIKNEEEQ
Ga0137380_101888784	3300012206	Vadose Zone Soil	VSGSALKSTLNLKSPDYPKNTRRIVDFLTEIKNEEERIRQGGGP
Ga0137380_104811202	3300012206	Vadose Zone Soil	VSASVLKTSANRKSPEFEKNTRRIVDLLTEIKNEEEKIR
Ga0137397_102546212	3300012685	Vadose Zone Soil	VSASVLKTSVNSKSPEFEKNARRIVDLLTKIKNEEETIR
Ga0137396_111589551	3300012918	Vadose Zone Soil	VSASVLNTSVNSKSPEFEKNARRIVDLLTRIKNEEEQIRQGGG
Ga0137359_102111712	3300012923	Vadose Zone Soil	VAASTLKTNVNTKSAEFEKNTRRMIDLVTQIKNEEE
Ga0137404_104367251	3300012929	Vadose Zone Soil	LYDFVRGLRVSASVLKTSVNKKSPEFETNTRKVIDLVAQIKNEEE
Ga0137407_112665881	3300012930	Vadose Zone Soil	VSDSVLKTSANIKSPEFEKNARRIVNLLTKIKNEEEQIF
Ga0153915_116166392	3300012931	Freshwater Wetlands	VSDSALKSKLNVHSPECEKNARRIVDLLTEMKNEEERIRQ
Ga0137420_11465042	3300015054	Vadose Zone Soil	VSASVLKTAINAKSPDFEKNSQRMVELLTAIKNEEEKIRQGGGAK
Ga0137412_1000229214	3300015242	Vadose Zone Soil	VSDSVLKTSANLKSPEFEKNARRIVDLLTKIKNEEEQIFQGG
Ga0182033_110097591	3300016319	Soil	VSASVLKTSINPKSPQFEKNAHQMADPLTTIKNEEETIR
Ga0182035_106263281	3300016341	Soil	VSASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIREGG
Ga0182038_101159074	3300016445	Soil	VSASVLKTSVNSKSPQFEKNARQMADLLTTIKNEEETLR
Ga0187820_10074874	3300017924	Freshwater Sediment	VAASVLKTSINAKSPNFEKNHRLFIDLLTKIKNEEE
Ga0187817_100844352	3300017955	Freshwater Sediment	VSASVLKTTVNVKSPEFEKNARRIVDLLTKIKNEEE
Ga0187783_101208274	3300017970	Tropical Peatland	LSSSVLQSTINLKSPEFEKNSRLMIDRLTEIKTEEEKIR
Ga0187770_101249931	3300018090	Tropical Peatland	MHRGKRVSTLKSSANPKSPHFEKNSHQMVELLTGLKNEEEKIRE
Ga0066667_108996922	3300018433	Grasslands Soil	VSASVLKTSANLKSPEFEKNARRVVDVLTKVTNEEE
Ga0066669_115293552	3300018482	Grasslands Soil	VSASVLKTTVNLKSPEFEKNTRRIVDLMTKIKNEEEQIR
Ga0210403_110916342	3300020580	Soil	VSDSVLKTSANLKSPEFEKNARRIVDLLTKIKNEEEQIFQGGGTKAIE
Ga0210403_112304661	3300020580	Soil	VSASVLKTTIDAKSPDFQKNSQRMVELLTAIKNEEEEIR
Ga0210399_100522423	3300020581	Soil	VSDSVLKTSANRKSPEFEKNARRIVDLLTKIKNEEEQIFQ
Ga0179596_104832722	3300021086	Vadose Zone Soil	VAASVLKTNVNTKSPEFENNTRRMIDLVTQIKNEEEQIAVGGGAKAI
Ga0210406_111376752	3300021168	Soil	LSASILKSTVNLKSPEFEKNSRRLIDLMTGLKNEEVQIS
Ga0210408_105339052	3300021178	Soil	VSDSVLKTSANRKSPEFEKNARRIVDLLTKIKNEE
Ga0210388_105858751	3300021181	Soil	VSASVLKTSVNAKSPDFAKNSRKVVDLVTQIKNEEE
Ga0210393_100717371	3300021401	Soil	VSASVLKTSVNSKSPEFEKNTRKVIDLVTQIKNEEEQISRGGGAKAI
Ga0210393_102908172	3300021401	Soil	VAASVLKTSVKAKSPDFEKNHRRIIDLLTKIKNEEEQI
Ga0210393_112880201	3300021401	Soil	VAASVLKTSVKAKSPDFERNHRRIIDLLTKIKNEEEQIRQGG
Ga0210387_116744481	3300021405	Soil	VSSSVLKTSANLKSPEFEKNSRRIVDLLTKFKNEE
Ga0210386_108545582	3300021406	Soil	VAASVLKTSVKAKSPDFEKNHRRLIDLLTKIKNEEEQILQGGG
Ga0210383_100841244	3300021407	Soil	VAASVLKTSVKAKSPDFEKNHRRTIDLLTKIKNEE
Ga0210394_103870701	3300021420	Soil	VSSSVLKTSVNTKSPDFEKNARRIADLLAAFKKDE
Ga0210394_108581142	3300021420	Soil	VSASVLKTSANLKSAEFEKNTRRIIELLTQLKNEE
Ga0210391_112488861	3300021433	Soil	VSASVLKTSVNSKSPEFEKNTRKVIDLVTQIKNEEEQISRGG
Ga0210390_104034621	3300021474	Soil	VSASVLKTSVNAKSPDFAKNSRKVVDLVTQIKNEEEQICQGG
Ga0210398_111100791	3300021477	Soil	VAASVLKTSVKVKSPDFEKNHRRIIDLLTKIKNEEEQILQG
Ga0210402_114430981	3300021478	Soil	VSASVLETSINTKSPEFEKNFQRMVELLTVIKNEEEKIRQGGGA
Ga0126371_131254432	3300021560	Tropical Forest Soil	LSAATPQSTVNTKSPEFEKNSHRLIDLMSQIKNEEAQIAQGGG
Ga0247667_10073691	3300024290	Soil	VAASVLKTSVNAKSPDFERNHRLFIDLLTKIKNEEEAIRQGGGSKAIASQ
Ga0207687_104648902	3300025927	Miscanthus Rhizosphere	VSGSVLKTSVNTKSPDFARNSRKVVDLVSQIKNEEEQISA
Ga0207686_105704221	3300025934	Miscanthus Rhizosphere	VSGSVLKTSVNTKSPDFARNSRKVVDLVSQIKNEEEQI
Ga0209236_10283791	3300026298	Grasslands Soil	VSGSVLKTAANRKSPEFEKNTRRIVDLLTEIKNEEEE
Ga0209268_10054271	3300026314	Soil	VAGSVLKTAANRKSPDFEKNTRRIVDLLTEIKNEEE
Ga0209471_13167742	3300026318	Soil	VSDSVLKTSANRKSPEFEKNARRAIDLLTTIKNEEE
Ga0257181_10194312	3300026499	Soil	VAASILKTNVNTKSPEFEKNTRRMIDLVTQIKNEEEQI
Ga0257181_10210151	3300026499	Soil	VSDSVLKTSANLKSPEFEKNARRIVDLLTKIKNEEEQIRQG
Ga0257165_10637232	3300026507	Soil	VPASTLSSNVNRKSPDFEKNTRRIIDLLTQIKNEEQKIREGGGA
Ga0257168_10789391	3300026514	Soil	VAASILKTNVNTKSPEFEKNTRRMIDLVTQIKNEEEQIAVG
Ga0209056_103754371	3300026538	Soil	VSASVLKTTANLKSPEFEKNTRRIVDLLTKIKNEEEQIRQ
Ga0209805_14042042	3300026542	Soil	VSASVLKTTANLKSPEFEKNTRRIVDLLTKIKNEEE
Ga0209648_103161861	3300026551	Grasslands Soil	VSASVLKTTANLKSPEFEKNTRRIVDLLTKIKNEE
Ga0179587_107580832	3300026557	Vadose Zone Soil	VAASTLKTNVNPKSAEFEKNTRRMIDLVTQIKNDEEQI
Ga0179587_111685751	3300026557	Vadose Zone Soil	VSASVLKTSANPKSPEFEKNSRRIVDLLTTIKNEEEQ
Ga0207856_10551362	3300026983	Tropical Forest Soil	VSASVLKTSVNFTSPQFEKNARQMADLLTTIKNEEETIRE
Ga0207736_1124111	3300027023	Tropical Forest Soil	VSSSVLKTSVNPNSPQFEKNAHQMTDLLTEIKNEEETIREGGGSK
Ga0209076_11343321	3300027643	Vadose Zone Soil	VAASILKTNVNTKSPEFEKNTRRMIDLVTQIKNEEEQ
Ga0209588_11713671	3300027671	Vadose Zone Soil	VSDSVLKTSANLKSPEFEKNVRRIIDLLTKIKNEEEQ
Ga0209590_105993251	3300027882	Vadose Zone Soil	VSASVLKTSANRKSPEFEKNTRRIVDLLTEIKNEE
Ga0209590_106491422	3300027882	Vadose Zone Soil	VSASVLKTAANLKSPEFEKNTRRIVDLLTKIKNEEEQIRQG
Ga0137415_101184581	3300028536	Vadose Zone Soil	VAASTLKTNVNTKSAEFEKNTRRMIDLVTQIKNDEEQ
Ga0137415_104339561	3300028536	Vadose Zone Soil	VSDSVLKTSANHKSAEFEKNARRIIDLLTKIKNEEE
Ga0137415_105648441	3300028536	Vadose Zone Soil	VSASVLKTSVNLQSPEFEKNAHRIVDLLTDIKNEEEEI
Ga0137415_110641732	3300028536	Vadose Zone Soil	VSASFLKTTANRKSPEFEKNARRIIDLLTKIKNEEEQIRQG
Ga0222749_100778742	3300029636	Soil	VSASVLKSNLNPKAPEFEKNARRVVDLLTSIKNEEELIRQGGGDK
Ga0170834_1051854742	3300031057	Forest Soil	VSGSVLKTSVNTKSPDFAKNSRKVVDLVSQIKNEEEQICAGGGAKAI
Ga0170824_1282082701	3300031231	Forest Soil	VSASVLKTSINDKSPDFAKNSRKVVDLVTQIKNEEEQ
Ga0307476_108430211	3300031715	Hardwood Forest Soil	VSASVLKTSVNIKSPEFEKNTRKVIDLVTQIKNEEEQ
Ga0318537_101228711	3300031763	Soil	VSASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIREGGG
Ga0307478_117772022	3300031823	Hardwood Forest Soil	VSASVLKTALNAKSPDFEKNSQRMVELLTTIKNEEEKIRQGGG
Ga0306919_102834473	3300031879	Soil	VSASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIREGGGA
Ga0318520_100209873	3300031897	Soil	VAGSVLKTAANRKSPDFEKNTRRIVDLLTEIKNQEEKAA
Ga0318520_102374432	3300031897	Soil	VSASVLKTSANPKSPQFEKNARQMADLLTMIKIEE
Ga0310912_109728531	3300031941	Soil	VSASVLKTSVNPKSPQFEKNAHQMVDLLTTIKNEEETIREGGGVKAI
Ga0310916_111835182	3300031942	Soil	VSASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIREG
Ga0310913_101718191	3300031945	Soil	VSTLKSSINAKSPQFEKNAHQMVDLLTQIKNEEEQIREGGGRKA
Ga0310910_110672421	3300031946	Soil	VSTLKSSINAKSPQFEKNAHQMVDLLTQIKNEEEQIREGGGAKAS
Ga0310909_102209141	3300031947	Soil	VFASVLKTSANPKSPQFEKNARQMADLLTMIKNEE
Ga0307479_112799281	3300031962	Hardwood Forest Soil	VSASVLKTSANRKSPEFEKNSRRIVDLLTTIKNEEEQIRQG
Ga0306924_105188571	3300032076	Soil	VFASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIRE
Ga0307471_1025945451	3300032180	Hardwood Forest Soil	VAASILKTNVNTKSPEFEKNTRRMIDLVTQIKNQEEQIAA
Ga0307472_1010797392	3300032205	Hardwood Forest Soil	VSASVLKTSVNLKSPEFEKNARRIVDLLTKIKNEEEQIRQG
Ga0306920_1003592844	3300032261	Soil	VFASVLKTSANPKSPQFEKNARQMADLLTMIKNEEETIREGGGA
Ga0335076_100443601	3300032955	Soil	VSSSALKTSITSKTPQFEKNNHQMISLMTEIKNEEE
Ga0310914_105266981	3300033289	Soil	VSASVLKTSINPKSPQFEKNAHQMADLLTTIKNEEETI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076151

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign