Metagenome / Metatranscriptome Family F076206

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076206
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	87 residues
Representative Sequence	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKIWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS
Number of Associated Samples	88
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.50 %
% of genes near scaffold ends (potentially truncated)	32.20 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.644 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (10.169 % of family members)
Environment Ontology (ENVO)	Unclassified (46.610 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.102 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.87% β-sheet: 0.00% Coil/Unstructured: 39.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF12833	HTH_18	4.24
PF02126	PTE	2.54
PF02805	Ada_Zn_binding	1.69
PF00571	CBS	1.69
PF07731	Cu-oxidase_2	1.69
PF12543	DUF3738	1.69
PF00753	Lactamase_B	1.69
PF07993	NAD_binding_4	1.69
PF01925	TauE	0.85
PF00072	Response_reg	0.85
PF00873	ACR_tran	0.85
PF13519	VWA_2	0.85
PF01564	Spermine_synth	0.85
PF01593	Amino_oxidase	0.85
PF13620	CarboxypepD_reg	0.85
PF11154	DUF2934	0.85
PF08668	HDOD	0.85
PF08308	PEGA	0.85
PF00654	Voltage_CLC	0.85
PF08448	PAS_4	0.85
PF13413	HTH_25	0.85
PF09859	Oxygenase-NA	0.85
PF06723	MreB_Mbl	0.85
PF10282	Lactonase	0.85
PF12704	MacB_PCD	0.85
PF02082	Rrf2	0.85
PF00069	Pkinase	0.85
PF00116	COX2	0.85
PF13442	Cytochrome_CBB3	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	2.54
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.69
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	1.69
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.85
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.85
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.85
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.85
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.85
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.85
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.85
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.85
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.85
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.85
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.85
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.85
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.92 %
Unclassified	root	N/A	31.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.51 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.51 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.39 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	2.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.85 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.54 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.85 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.54 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.85 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.54 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.51 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.54 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.85 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.85 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101073855	Not Available	700	Open in IMG/M
3300005295\|Ga0065707_10512724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005329\|Ga0070683_100000728	All Organisms → cellular organisms → Bacteria	24092	Open in IMG/M
3300005329\|Ga0070683_100000982	All Organisms → cellular organisms → Bacteria	21272	Open in IMG/M
3300005329\|Ga0070683_100325789	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300005329\|Ga0070683_100384797	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300005329\|Ga0070683_101862654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	578	Open in IMG/M
3300005329\|Ga0070683_102293637	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005332\|Ga0066388_103920072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300005338\|Ga0068868_101311029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005340\|Ga0070689_100888447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300005435\|Ga0070714_102245807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	531	Open in IMG/M
3300005436\|Ga0070713_100020449	All Organisms → cellular organisms → Bacteria	5075	Open in IMG/M
3300005436\|Ga0070713_100443211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1218	Open in IMG/M
3300005436\|Ga0070713_101825061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300005439\|Ga0070711_100032969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3447	Open in IMG/M
3300005439\|Ga0070711_100257280	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300005439\|Ga0070711_100300711	Not Available	1276	Open in IMG/M
3300005457\|Ga0070662_101913178	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005459\|Ga0068867_102145312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005526\|Ga0073909_10343846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	689	Open in IMG/M
3300005534\|Ga0070735_10010127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7279	Open in IMG/M
3300005542\|Ga0070732_10399840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300005547\|Ga0070693_100790272	Not Available	703	Open in IMG/M
3300005547\|Ga0070693_101510247	Not Available	525	Open in IMG/M
3300005563\|Ga0068855_100069006	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
3300005564\|Ga0070664_102269014	Not Available	515	Open in IMG/M
3300005569\|Ga0066705_10774684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	573	Open in IMG/M
3300005577\|Ga0068857_100141196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2177	Open in IMG/M
3300005614\|Ga0068856_101075225	Not Available	822	Open in IMG/M
3300005616\|Ga0068852_101823055	Not Available	631	Open in IMG/M
3300005618\|Ga0068864_100947786	Not Available	851	Open in IMG/M
3300006028\|Ga0070717_11807041	Not Available	552	Open in IMG/M
3300006237\|Ga0097621_100684553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300006358\|Ga0068871_100343500	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300006854\|Ga0075425_100974539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300006871\|Ga0075434_101611961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300006881\|Ga0068865_100125655	Not Available	1914	Open in IMG/M
3300006954\|Ga0079219_10445699	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300009093\|Ga0105240_10213353	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300009093\|Ga0105240_11885469	Not Available	622	Open in IMG/M
3300009098\|Ga0105245_10671007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300009098\|Ga0105245_10710590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300009098\|Ga0105245_11257202	Not Available	789	Open in IMG/M
3300009101\|Ga0105247_10698464	Not Available	763	Open in IMG/M
3300009148\|Ga0105243_11532977	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	691	Open in IMG/M
3300009148\|Ga0105243_12870002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300009174\|Ga0105241_10075962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2619	Open in IMG/M
3300009174\|Ga0105241_11267559	Not Available	701	Open in IMG/M
3300009174\|Ga0105241_11302132	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300009174\|Ga0105241_12350176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009174\|Ga0105241_12655274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300009176\|Ga0105242_10169723	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300009177\|Ga0105248_10030447	All Organisms → cellular organisms → Bacteria	6025	Open in IMG/M
3300009545\|Ga0105237_10684965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300009551\|Ga0105238_11137903	Not Available	804	Open in IMG/M
3300010371\|Ga0134125_11861732	Not Available	654	Open in IMG/M
3300010373\|Ga0134128_10062902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	4270	Open in IMG/M
3300010396\|Ga0134126_11202062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300010397\|Ga0134124_12599338	Not Available	549	Open in IMG/M
3300010400\|Ga0134122_11707213	Not Available	658	Open in IMG/M
3300010401\|Ga0134121_12294147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300011120\|Ga0150983_14651885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012955\|Ga0164298_10143730	Not Available	1330	Open in IMG/M
3300012982\|Ga0168317_1004146	All Organisms → cellular organisms → Bacteria	5917	Open in IMG/M
3300012982\|Ga0168317_1052153	Not Available	1018	Open in IMG/M
3300012986\|Ga0164304_11038554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300013105\|Ga0157369_11160225	Not Available	789	Open in IMG/M
3300013296\|Ga0157374_12007675	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300013296\|Ga0157374_12953458	Not Available	502	Open in IMG/M
3300013297\|Ga0157378_11762429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300013306\|Ga0163162_10873663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300013307\|Ga0157372_12569150	Not Available	585	Open in IMG/M
3300013308\|Ga0157375_11972284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300014745\|Ga0157377_11341774	Not Available	561	Open in IMG/M
3300014968\|Ga0157379_10818671	Not Available	880	Open in IMG/M
3300014969\|Ga0157376_11503961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300020580\|Ga0210403_10588671	Not Available	899	Open in IMG/M
3300021168\|Ga0210406_10187075	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300021170\|Ga0210400_10425812	Not Available	1095	Open in IMG/M
3300021170\|Ga0210400_10924731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300021478\|Ga0210402_10930010	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300021478\|Ga0210402_11132105	Not Available	710	Open in IMG/M
3300021559\|Ga0210409_11020106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300022525\|Ga0242656_1101583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300022533\|Ga0242662_10314954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300025900\|Ga0207710_10684008	Not Available	538	Open in IMG/M
3300025911\|Ga0207654_10001338	All Organisms → cellular organisms → Bacteria → Proteobacteria	13076	Open in IMG/M
3300025913\|Ga0207695_10127669	All Organisms → cellular organisms → Bacteria → Acidobacteria	2504	Open in IMG/M
3300025924\|Ga0207694_10001005	All Organisms → cellular organisms → Bacteria	24646	Open in IMG/M
3300025927\|Ga0207687_10171029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1676	Open in IMG/M
3300025927\|Ga0207687_10752493	Not Available	829	Open in IMG/M
3300025927\|Ga0207687_11346922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300025927\|Ga0207687_11430734	Not Available	594	Open in IMG/M
3300025928\|Ga0207700_10109035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2224	Open in IMG/M
3300025928\|Ga0207700_10292153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1405	Open in IMG/M
3300025929\|Ga0207664_10616722	Not Available	975	Open in IMG/M
3300025935\|Ga0207709_10503440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300025938\|Ga0207704_10100213	Not Available	1929	Open in IMG/M
3300025944\|Ga0207661_10072078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2825	Open in IMG/M
3300025944\|Ga0207661_10588405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300025944\|Ga0207661_12141603	Not Available	505	Open in IMG/M
3300025945\|Ga0207679_10615163	Not Available	980	Open in IMG/M
3300026023\|Ga0207677_10743255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300026078\|Ga0207702_10497559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300027842\|Ga0209580_10034137	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300027986\|Ga0209168_10006664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7283	Open in IMG/M
3300029636\|Ga0222749_10253300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300031057\|Ga0170834_101104573	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300031057\|Ga0170834_111828106	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031231\|Ga0170824_120233719	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031938\|Ga0308175_100047871	All Organisms → cellular organisms → Bacteria	3676	Open in IMG/M
3300031938\|Ga0308175_100148966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2241	Open in IMG/M
3300031939\|Ga0308174_11914837	Not Available	510	Open in IMG/M
3300031996\|Ga0308176_10116471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2382	Open in IMG/M
3300033412\|Ga0310810_10043456	All Organisms → cellular organisms → Bacteria	5485	Open in IMG/M
3300033513\|Ga0316628_100645202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1384	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.24%
Host-Associated	Host-Associated	45.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.24%
Plants	Host-Associated → Plants	45.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.17%
Geologic	Environmental → Terrestrial → Geologic	1.69%
Roots	Host-Associated → Plants → Roots	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.51%
Loam	Environmental → Terrestrial → Soil → Loam	21.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Mine	Environmental → Terrestrial → Geologic → Mine	1.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	1.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	10.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.08%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.69%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1010738551	3300004479	Soil	MEYFNPVLLLILVSEICLGVCAWHSPRFLRRVAAHLLTRADVVDVSRLESERRMKVWLNEFGLETDALSPEQRAH*
Ga0065707_105127241	3300005295	Switchgrass Rhizosphere	MMNQHTGLPKACMPEVCTVEYFNPVLLLILMAEMCLGICAWHSPRFLRRLAAHLLTRADVVDVSRQESERRLKVWLDEFGLDADPSSTKPQERAHTLSPDELKVS*
Ga0070683_10000072826	3300005329	Corn Rhizosphere	MEYLNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVAEVSRQESERRMKVWLNEFGLEADPVSMKQQGYVSSFPRDEVKAS*
Ga0070683_10000098223	3300005329	Corn Rhizosphere	MEYINPVLLLILIAEVCLGLCAWISPSFLRRVAAHLLTRADVLDVSREEHERRMKVWLDELGLNSDPKSANQHVPVHRFSRDEVKAS*
Ga0070683_1003257891	3300005329	Corn Rhizosphere	MEYLNPVLLLMLVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPAAKKQVRVHEFSRDEVKAS*
Ga0070683_1003847972	3300005329	Corn Rhizosphere	VEYLNPVLLMILVSEVCLGICTWNSPRFLRRISAHLLTRADVVDVSRRESERRMKFWLNECGLEADPVTAKYQTRVNEFSRVEVKVS*
Ga0070683_1018626542	3300005329	Corn Rhizosphere	APAAQEVFTMEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHVLTRADVVDVSRQESERRMKVWLDELGLEADPQSTEQKVRIRQLCRDEVKAS*
Ga0070683_1022936372	3300005329	Corn Rhizosphere	MEYLNPVLLLILVGEICLGICAWNSPRFLRRAAAHLLTRADVVDLSRKESERRMKLWLNEFGLEPEGASTTRNQARVHRFSQDEAKVS*
Ga0066388_1039200722	3300005332	Tropical Forest Soil	MEYVNPVMLLMLVAEICLGICAWHSPRFLRRLAAHLLTRADVVDVSRKESERRMKIWMDELGLDAGQRSPMKSHQLPLRPFAQDDVKVS*
Ga0068868_1013110292	3300005338	Miscanthus Rhizosphere	MQEVGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL*
Ga0070689_1008884471	3300005340	Switchgrass Rhizosphere	MQEVGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLESDPLNTKTQERVQRVSPDELKVSGSASIGL*
Ga0070714_1022458072	3300005435	Agricultural Soil	ILLLMLVSEVCLGICAWHSPRFLRRVAAHVLTRADVVDVSRQESERRMKVWLDELGLEADPQSTEQKVRIRRLCRDEVKAS*
Ga0070713_1000204497	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHVLTRADVVDVSRQESERRMKVWLDELGLEADPQSTEQKVRIRQLCRDEVKAS*
Ga0070713_1004432112	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MILVSEVCLGICTWNSPRFLRRISAHLLTRADVVDVSRRESERRMKFWLNECGLEADPVTAKYQARVNEFSRVEVKVS*
Ga0070713_1018250611	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEYVNPVMLLILLSQVCLGICAWQSPRFLRRAAAHLLTRADVVDVSRKEGELRMKLWLEELGVDAAQKSGKAPHQLPVHRFAHDEVKVS*
Ga0070711_1000329695	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEYVNPVMLLMLISEVCLGICAWHSPRFLRRAAAHLLTRADVVDVSRKEGERRMKLWLDEFGLDGDAKSAKAPHQLPVHRFSQEEVKAS*
Ga0070711_1002572803	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEYLNPVLLLILVSQVCLGYCAWQSPRFLRRTAAHLLTRADVVELSKAESQRRMKLWLDELGLDADPAKAAHPVPLQRFSTDEVKAS*
Ga0070711_1003007111	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLNDDPKAKKQVRVHEFSRDEVKAS*
Ga0070662_1019131781	3300005457	Corn Rhizosphere	VPVIKEVYAMEYINPVLLLILIAEVCLGLCAWISPSFLRRVAAHLLTRADVLDVSREEHERRMKVWLDELGLNSDPKSANQHVPVHRFSRDEVKAS*
Ga0068867_1021453121	3300005459	Miscanthus Rhizosphere	EVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL*
Ga0073909_103438461	3300005526	Surface Soil	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLNDDPKANNQVRVHEFSRDEVKAS*
Ga0070735_100101274	3300005534	Surface Soil	MEYLNPVLLLILVSEVCLGICAWHSPRFLRRTAAHLLTRADVVDLSRQESERRMKVWLNEFGLEADPLSTKQQEYVRPDEVKAS*
Ga0070732_103998401	3300005542	Surface Soil	LVMQEVSTMEYLNPVLLLMLVSQVCLGICAWQSPRFLRRTAAHLLTRADVVDLSRAESERRMKLWLDELGLDADPTSTKAPHPLPVHRLSQDEVKAS*
Ga0070693_1007902721	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MEYLNPVLLLILVAEVCLAICAWHSPRFLRRAAAHLLTRADVVDVSRTESDRRMKLWLNELGLESDPLSTSRHARVHEFSSGKVNVS*
Ga0070693_1015102471	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VEYLNPVLLLILVSEICLGICAWRSPRYLRRIAAHLLTRADIIDVTRQEGERRMKVWLDEFGLEADPAGAKTQARVHHFPTDEVKAS*
Ga0068855_1000690063	3300005563	Corn Rhizosphere	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLNEFGLDADLVSAKKQVRIHEFSGDEVKAS*
Ga0070664_1022690141	3300005564	Corn Rhizosphere	MEYLNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS*
Ga0066705_107746841	3300005569	Soil	MEYLNPVLLLMLVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLEEFGLDADPAAKKQVRVHEFSRDEVKAS*
Ga0068857_1001411962	3300005577	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICASHSPRFLRRVAAYLLTQADVVDVSRQESERRMNLWLNEFGLEADPLSTKQQAYVRRFPQDEVKAS*
Ga0068856_1010752252	3300005614	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSPRFLRRVAAYLLTQADVVDVSRQESDRRMKLLLNEFGLEADPLSTKQQAYVRRFPQDEVKAS*
Ga0068852_1018230551	3300005616	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSQRFLRRFAAHLLTQADVVDVSRQESERRMKLWLNEFGLEADPLSTKQQAYVRRFPQDEVKAS*
Ga0068864_1009477861	3300005618	Switchgrass Rhizosphere	MEYLNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL*
Ga0070717_118070411	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EEYYASINTRSATVEYLNPVLLMILVSEVCLGICTWNSPRFLRRISAHLLTRADVVDVSRRESERRMKFWLNECGLEADPVTAKYQARVNEFSRVEVKVS*
Ga0097621_1006845532	3300006237	Miscanthus Rhizosphere	VEYFNPVLLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKLWLDELGLESDPRSTKRPERVHRFSRDEVKVS*
Ga0068871_1003435002	3300006358	Miscanthus Rhizosphere	LNPVLLLILVGEICLGICAWNSPRFLRRAAAHLLTRADVVDLSRKESERRMKLWLNEFGLEPEGASTTRNQARVHRFSQDEAKVS*
Ga0075425_1009745392	3300006854	Populus Rhizosphere	MEYLNPVLLLILLSEICLGICSWQSPRFLRRLAAHLLTRADVVDVCRKESERRMKLWLDELGVNSDPMAAETSDPAPVHRFSRDEVKVS*
Ga0075434_1016119612	3300006871	Populus Rhizosphere	MEYLNPVLLLILLSEICLGICSWQSPRFLRRLAAHLLTRADVVDVCRKESERRMKLWLDELGVNNGPLSAETPDPAPVHRFSRDEVKVS*
Ga0068865_1001256552	3300006881	Miscanthus Rhizosphere	VEYFNPVLLMIFVSEVCLGICAWRSPRFRRIAAHLLTRADVVNVSRQEHERRMKLWLDELGLESDPGSTNLPARVHRFSRMN*
Ga0079219_104456991	3300006954	Agricultural Soil	MEYFNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRQERGRRMKLWLNEFGLEADPSNTKQQAYVHRFSQDEAKVS*
Ga0105240_102133534	3300009093	Corn Rhizosphere	MEYFNPILLLILVSEVCLGICAWHSPRFLRRLAAHLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRLSRNEVKAS*
Ga0105240_118854691	3300009093	Corn Rhizosphere	MEYLNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQVRVHEFSRDE
Ga0105245_106710072	3300009098	Miscanthus Rhizosphere	MEYFNPILLLILVSEVCLGICAWHSPRFLRRAAAHLLTRADVVDVSRQEAQQRMKVWLNEFGLDADPLSTKQQAYVRQFSRTK*
Ga0105245_107105902	3300009098	Miscanthus Rhizosphere	VEYFNPILLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVYVSRQESERRMKLWLDELGLEPDPGGTKQPARVHRFSRDEVKVS*
Ga0105245_112572022	3300009098	Miscanthus Rhizosphere	MEYFNPVLLMIFVSEVCLAICAWQSPRFLRRIAAHLLTRADVVYVSRQESERRMKLWLDELGLESDPRSTKRPERVHRFSRDEVKVS*
Ga0105247_106984641	3300009101	Switchgrass Rhizosphere	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLNDDPKAKKQV
Ga0105243_115329771	3300009148	Miscanthus Rhizosphere	GRFAVEYLNPVLLLILVSEVCLGICAWRSPRFLRRIAAHLLTRADVMDVSRQEGERRMKVWLEEFGLGADPMSTQQQARLHRFPADEVKAS*
Ga0105243_128700022	3300009148	Miscanthus Rhizosphere	MQEVGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLESDPLNTKTQERVQRVSP
Ga0105241_100759621	3300009174	Corn Rhizosphere	MEYFNPVLLLILVSEICLGVCAWHSPRFLRRVAAHLLTRADVVDVSRQERERRMKLWLNEFGLEADPSNTKQQAYVHRFSRDQVKAS*
Ga0105241_112675591	3300009174	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSPRFLRRVAAYLLTQADVVDVSRQESERRMKLWLNEFGLEADPLSTKQQAYVRRFPQDEVKAS*
Ga0105241_113021322	3300009174	Corn Rhizosphere	MEYLNPVLLLILVAEVCLAICAWHSPRFLRRAAAHLLTRADVVDVSRTESEQRMKVWLKELKVETDPVSTSQHTRVHELSDAKVRVS*
Ga0105241_123501762	3300009174	Corn Rhizosphere	MEYLNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVAEVSRQESERRMKVWLNEFGLEADPVSMK
Ga0105241_126552741	3300009174	Corn Rhizosphere	MEYLNPVLLLILIAEVCLGICAWHSPRFLRRLAAHLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRLSRNEVKAS*
Ga0105242_101697231	3300009176	Miscanthus Rhizosphere	VCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS*
Ga0105248_100304474	3300009177	Switchgrass Rhizosphere	MEYLNPVLLLILVGEVCLGMGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS*
Ga0105237_106849652	3300009545	Corn Rhizosphere	MEYFNPVLLLILVSEVCLGICAWHSPRFLRRTAAHLLTRADVVDVSRQESERRMNLWLNESGLEADPLSTKQQAYVRRFPQDEVKAS*
Ga0105238_111379032	3300009551	Corn Rhizosphere	MEYLNPVLLLILVAEVCLGICAWHSPNFLRRVAAHLLTRADVVDVSRQESERRMKVWLDEFGLDSNPVSTKQQVRVHPVSRDEVKVS*
Ga0134125_118617321	3300010371	Terrestrial Soil	MEYLNPVLLLILVAEVCLGICAWHSPNFLRRVAAHLLTRADVVDVSRQESERRMKVWLDEFGLDSNPVTTKQQVRVHPVSRDEVKVS*
Ga0134128_100629026	3300010373	Terrestrial Soil	MEYFNPVLLMIFISEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRLESERRMKVWLNEFGLETDALSPEQRAH*
Ga0134126_112020621	3300010396	Terrestrial Soil	VCTMEYLNPVLLLILVAEVCLGICAWHSPNFLRRVAAHLLTRADVVDVSRQESERRMKVWLDEFGLVSNPVSTKQQVRVHPVSRDEVKVS*
Ga0134124_125993382	3300010397	Terrestrial Soil	SEVCLGICAWHSPRFLRRIAAHLLTRADVVDVSRTESERRMKVWLNEFGLEEADPMNTKHQADARRFPGHEVEAS*
Ga0134122_117072131	3300010400	Terrestrial Soil	VSPPRTSGVFPSLHWQEMMNQHTELRKAWYARCCTVEYFNPVLLLILMAEVCLGICAWHSPRFLLRLAAHLLTRADVVDLSRQESERRLKVWLDEFGLDADPSSTKPQERAHRLSPGEVKVS*
Ga0134121_122941472	3300010401	Terrestrial Soil	MEYFNPVLLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVNVSRQEHERRMKLWLDELGLESDPGSTKLPARVHRFSRMK*
Ga0150983_146518852	3300011120	Forest Soil	VEYLNPVLLLVLVSQVCLGICAWRSPQFLRRIAAHLLTRADVVEVSRAEGERRIKIWMDQLVPDEPPANAKAPRPVAIRRFSGSEVKVEVS*
Ga0164298_101437302	3300012955	Soil	MEYFNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRQERGRRMKLWLNEFGLEADLLGTKQQACVRRSPGTK*
Ga0168317_10041465	3300012982	Weathered Mine Tailings	MEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHVLTRADVVDVSRQESERRMKVWLDELGLEADPQNTEQKVRLRQLCRDQVKAS*
Ga0168317_10521532	3300012982	Weathered Mine Tailings	VEYFNPVLLMILVSEVCLGICTWHSPRFLRRIAAHLLTRADVVDVARQESERRLKFWLTECGLGADPVTAKHQARVSQLSQVEVKVS*
Ga0164304_110385542	3300012986	Soil	MEYFNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRLESERRMKVWLNEFGLETDALSPEQRAH*
Ga0157369_111602252	3300013105	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSQRFLRRFAAHLLTQADVVDVSRQESERRMNLWLNEFGLEADPLSTKQQAYVRRFPQDEV
Ga0157374_120076752	3300013296	Miscanthus Rhizosphere	EYFNPILLLILVSEVCLGICAWHSPRFLRRLAAHLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRLSRNEVKAS*
Ga0157374_129534581	3300013296	Miscanthus Rhizosphere	YYASINTRSATVEYLNPVLLMILVSEVCLGICTWNSPRFLRRISAHLLTRADVVDVSRRESERRMKFWLNECGLEADPVTAKYQARVNEFSRVEVKVS*
Ga0157378_117624291	3300013297	Miscanthus Rhizosphere	VEYCNPVLLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKLWLDELGLESDPRSTKRPERVHRFSRDEVKVS*
Ga0163162_108736633	3300013306	Switchgrass Rhizosphere	VEYFNPVLLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVNVSRQEHERRMKLWLDELGLESDPGSTNLPA
Ga0157372_125691501	3300013307	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSPRFLRRVAAHLLTQADVVDVSRQESERRMNLWLNEFGLEADPLSTKQQAYVR
Ga0157375_119722841	3300013308	Miscanthus Rhizosphere	VGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL*
Ga0157377_113417741	3300014745	Miscanthus Rhizosphere	MEYLNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLESDPLNTKTQERVQRVSPDELKVSGSASIGL*
Ga0157379_108186712	3300014968	Switchgrass Rhizosphere	GEVCLGMGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQMRVHEFSRDEVKAS*
Ga0157376_115039612	3300014969	Miscanthus Rhizosphere	MEYFNPVLLLILVSEVCLGICAWHSPRFLRRLAAHLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRLSRNEVKAS*
Ga0210403_105886711	3300020580	Soil	MEYLNPVLLLILVSQVCLGFCAWQSPRFLRRTAAHLLTRADVVDLSKAESQRRMKLWLDELGLDADPSTATAPDPVRLHRFSADEVKAS
Ga0210406_101870752	3300021168	Soil	VQEVSIVEYVNPVLLLILLSEICLAICAWQSPRFLRRVAAHLLTRADVIDVSRKESDRSMKLWLTELGLDAEAPSTEARHPLSAHRLSGTN
Ga0210400_104258122	3300021170	Soil	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKIWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS
Ga0210400_109247312	3300021170	Soil	MEYMNPVLLLILLSQVCLGFCAWQSPRFLRRTAAHLLTRADVVVLSRAESERRMNLWMNELGLDADPTKAGHPAPVHRFSGDEVKAS
Ga0210402_109300101	3300021478	Soil	MEYFNPVLLLILISEVCLGICAWHSPRFLRRIAAHLLTRADVVDVSRQESERRMKVWLNEFGLEADPMSTKHQAPSRGFPGDEVKAS
Ga0210402_111321053	3300021478	Soil	MEYINPVLLLILLSQICLSICAWRSPRFLRRTAAHLLTRADVVDLSRAERERRMKLWLDELGLDADPTKATHPVPLHRFSAEEIKVS
Ga0210409_110201062	3300021559	Soil	VEYLNPVLLMILVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKLWLNELGLETDPLSPKQQVRVHRFS
Ga0242656_11015832	3300022525	Soil	EYFNPVLLMILVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKVWLNELGLETDPLSPKQQVRVHRFSRDEVKVS
Ga0242662_103149541	3300022533	Soil	LVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKVWLNELGLETDPLSPKQQVRVHRFSRDEVKVS
Ga0207710_106840081	3300025900	Switchgrass Rhizosphere	MEYLNPVLLLILVGEICLGICAWNSPRFLRRAAAHLLTRADVVDLSRKESERRMKLWLNEFGLEPEGASTTRNQARVHRFSQDEAKVS
Ga0207654_1000133815	3300025911	Corn Rhizosphere	MEYINPVLLLILIAEVCLGLCAWISPSFLRRVAAHLLTRADVLDVSREEHERRMKVWLDELGLNSDPKSANQHVPVHRFSRDEVKAS
Ga0207695_101276692	3300025913	Corn Rhizosphere	MEYLNPVLLLILVAEVCLGICAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLNEFGLDADLVSAKKQVRIHEFSGDEVKAS
Ga0207694_1000100519	3300025924	Corn Rhizosphere	MEYLNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDADPVSAKKQVRVHEFSRDEVKAS
Ga0207687_101710293	3300025927	Miscanthus Rhizosphere	VAYFNPVLLMIFVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKLWLDELGLESDPRSTKRPERVHRFSRDEVKVS
Ga0207687_107524931	3300025927	Miscanthus Rhizosphere	VLLLILVSEVCLGICAWHSPRFLRRAAAHLLTRADVVDVSRQEAQQRMKVWLNEFGLDADPLSTKQQAYVRQFSRTK
Ga0207687_113469223	3300025927	Miscanthus Rhizosphere	MQEVGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERV
Ga0207687_114307342	3300025927	Miscanthus Rhizosphere	MEYLNPVLLLILVAEVCLAICAWHSPRFLRRAAAHLLTRADVVDVSRTESDRRMKLWLNELGLESDPLSTSRHARVHEFSSGKVN
Ga0207700_101090352	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEYLNPVLLMILVSEVCLGICTWNSPRFLRRISAHLLTRADVVDVSRRESERRMKFWLNECGLEADPVTAKYQARVNEFSRVEVKVS
Ga0207700_102921531	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GICAWHSPRFLRRTAAHLLTRADVVDVSRQESERRMKLWLSEFGLEPDLLSPRQQARVNRFSRNDVKAS
Ga0207664_106167221	3300025929	Agricultural Soil	MEYFNPVLLLILVSEVCLCICAWHSPRFLRRVAAHLLTQADVVDVSRQESERRMKLWLNEFGLEADPLSTKQQAYVRRFPQDEVKAS
Ga0207709_105034401	3300025935	Miscanthus Rhizosphere	PGLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL
Ga0207704_101002133	3300025938	Miscanthus Rhizosphere	VEYFNPVLLMIFVSEVCLGICAWRSPRFRRIAAHLLTRADVVNVSRQEHERRMKLWLDELGLESDPGSTNLPARVHRFSRMN
Ga0207661_100720782	3300025944	Corn Rhizosphere	MEYLNPVLLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVAEVSRQESERRMKVWLNEFGLEADPVSMKQQGYVSSFPRDEVKAS
Ga0207661_105884053	3300025944	Corn Rhizosphere	MEYFNPILLLILVSEVCLGICAWHSPRFLRRLAANLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRLSRNEVKAS
Ga0207661_121416031	3300025944	Corn Rhizosphere	MEYFNPVLLLILVSEVCLCICAWHSQRFLRRFAAHLLTQADVVDVSRQESERRMKLWLNEFGLEADPLSTKQQAYVRRFPQDEVKAS
Ga0207679_106151631	3300025945	Corn Rhizosphere	VFEEHRETDMQQEFLKCKYILNPVLLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL
Ga0207677_107432551	3300026023	Miscanthus Rhizosphere	MQEVGTMEYFNPVLLLILMAEVCLGICAWHSPRFLRRLAAHLLTRADVVDLSRQESERRMKVWLDEFGLEADPLSTKTQERVQRVSPDELKVSGSASIGL
Ga0207702_104975594	3300026078	Corn Rhizosphere	MEYFNPILLLILVSEVCLGICAWHSPRFLRRLAAHLLTRADVVDVSREESQRRMKLWLNEFGLEADPLSTRQQTRLNRL
Ga0209580_100341372	3300027842	Surface Soil	MQEVSTMEYLNPVLLLMLVSQVCLGICAWQSPRFLRRTAAHLLTRADVVDLSRAESERRMKLWLDELGLDADPTSTKAPHPLPVHRLSQDEVKAS
Ga0209168_100066644	3300027986	Surface Soil	MEYLNPVLLLILVSEVCLGICAWHSPRFLRRTAAHLLTRADVVDLSRQESERRMKVWLNEFGLEADPLSTKQQEYVRPDEVKAS
Ga0222749_102533002	3300029636	Soil	VEYFNPVLLMILVSEVCLGICAWRSPRFLRRIAAHLLTRADVVDVSRQESERRMKVWLNELGLETDPLSPKQQVRVHRFSRDEVKVS
Ga0170834_1011045733	3300031057	Forest Soil	MEYLNPILLLILVGEVCLGIGAWHSPQFLRRVAAHLLTRADVVDVSRLESERRMKVWLDEFGLDANTVSAKKQVRVHEFSRDEVKAS
Ga0170834_1118281062	3300031057	Forest Soil	RTMEYFNPILLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSREEGQRRMKLWLNELGLEADPLSTRPQARLNRLSRNEVKAS
Ga0170824_1202337192	3300031231	Forest Soil	MEYFNPILLLILVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSREEGQRRMKLWLNELGLEADPLSTRPQARLNRLSRNEVKAS
Ga0308175_1000478712	3300031938	Soil	VRRRFRRHLRADVHSETEKSRYASDDTGSAAVEYFNPVLLMILVSEVCLGICAWHSPRFLRRIAAHLLTRADVMDICRQENERRMKAWLSEFGLDSGPSDAKQPAALSRFSRDEVKVS
Ga0308175_1001489664	3300031938	Soil	MEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRQESERRMKIWLDELGLETDSSISDKKVRIQQLCGDEAKAS
Ga0308174_119148371	3300031939	Soil	VEYFNPVLLMILVSEVCLGICAWHSPRFLRRIAAHLLTRADVMDICRQENERRMKAWLSEFGLDSGPLDAKQPAALSRFSRDQVKVS
Ga0308176_101164711	3300031996	Soil	SAAKEVIIMEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRQESERRMKIWLDELGLETDSSISDKKVRIQQLCGDEAKAS
Ga0308173_119393732	3300032074	Soil	MEYLNPILLLMLVSEVCLGICAWHSPRFLRRVAAHLLTRADVVDVSRQESERRMKIWLDELGLETDSSISDKKVRIQQLCGDE
Ga0310810_100434562	3300033412	Soil	MQEVTDMEYLNPVLLLILISQVCLGICAWQSPQFLRRTAARLLTRADVVDLSRAEGERRMKLWLDELGLDADPTRAKAPRQVPLRRFSADEVELS
Ga0316628_1006452023	3300033513	Soil	MEYLNPILLLMLVSEVCLGVCAWHSPRFLRRVAAHVLTRADVVDVSRQESERRMKVWLDELGLEADPQSTEQKVRIRQLCRDEVKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076206

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences