NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076291

Metagenome / Metatranscriptome Family F076291

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076291
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 63 residues
Representative Sequence VEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPPGVAR
Number of Associated Samples 103
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.46 %
% of genes from short scaffolds (< 2000 bps) 94.07 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.525 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.881 % of family members)
Environment Ontology (ENVO) Unclassified
(22.881 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.220 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 53.93%    β-sheet: 0.00%    Coil/Unstructured: 46.07%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF01914MarC 13.56
PF00406ADK 3.39
PF13649Methyltransf_25 2.54
PF13193AMP-binding_C 2.54
PF13091PLDc_2 1.69
PF13847Methyltransf_31 1.69
PF01381HTH_3 1.69
PF08241Methyltransf_11 1.69
PF00196GerE 0.85
PF07836DmpG_comm 0.85
PF01575MaoC_dehydratas 0.85
PF13565HTH_32 0.85
PF01850PIN 0.85
PF00248Aldo_ket_red 0.85
PF13671AAA_33 0.85
PF01895PhoU 0.85
PF00296Bac_luciferase 0.85
PF14023DUF4239 0.85
PF01872RibD_C 0.85
PF00925GTP_cyclohydro2 0.85
PF00753Lactamase_B 0.85
PF09594GT87 0.85
PF12697Abhydrolase_6 0.85
PF05724TPMT 0.85
PF01425Amidase 0.85
PF00300His_Phos_1 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG2095Small neutral amino acid transporter SnatA, MarC familyAmino acid transport and metabolism [E] 13.56
COG0563Adenylate kinase or related kinaseNucleotide transport and metabolism [F] 3.39
COG0119Isopropylmalate/homocitrate/citramalate synthasesAmino acid transport and metabolism [E] 0.85
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.85
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.85
COG0807GTP cyclohydrolase IICoenzyme transport and metabolism [H] 0.85
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.85
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.53 %
UnclassifiedrootN/A8.47 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573002|GZIGXIF02I6FT6All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii510Open in IMG/M
3300001356|JGI12269J14319_10134919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1098Open in IMG/M
3300003505|JGIcombinedJ51221_10163973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia899Open in IMG/M
3300005337|Ga0070682_100439355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria996Open in IMG/M
3300005337|Ga0070682_102062792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii502Open in IMG/M
3300005338|Ga0068868_101826774Not Available574Open in IMG/M
3300005434|Ga0070709_10379518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1050Open in IMG/M
3300005435|Ga0070714_100069695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3038Open in IMG/M
3300005435|Ga0070714_101495908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii659Open in IMG/M
3300005437|Ga0070710_10097555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1744Open in IMG/M
3300005437|Ga0070710_11372350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii527Open in IMG/M
3300005440|Ga0070705_100730891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii781Open in IMG/M
3300005456|Ga0070678_100308263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1348Open in IMG/M
3300005458|Ga0070681_10419267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1250Open in IMG/M
3300005458|Ga0070681_12042200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii501Open in IMG/M
3300005535|Ga0070684_100478393All Organisms → cellular organisms → Bacteria → Terrabacteria group1152Open in IMG/M
3300005536|Ga0070697_101867275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia538Open in IMG/M
3300005537|Ga0070730_10718118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia633Open in IMG/M
3300005548|Ga0070665_102205555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii554Open in IMG/M
3300005564|Ga0070664_100706501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria939Open in IMG/M
3300005578|Ga0068854_101689655Not Available579Open in IMG/M
3300005616|Ga0068852_101281256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii754Open in IMG/M
3300005921|Ga0070766_10546823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii773Open in IMG/M
3300006176|Ga0070765_101315427Not Available682Open in IMG/M
3300006575|Ga0074053_10021483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1110Open in IMG/M
3300006576|Ga0074047_12075457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii502Open in IMG/M
3300006804|Ga0079221_10095756All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300006852|Ga0075433_10516887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1050Open in IMG/M
3300006854|Ga0075425_101026389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia940Open in IMG/M
3300006871|Ga0075434_100083074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3200Open in IMG/M
3300006881|Ga0068865_101055481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii714Open in IMG/M
3300006903|Ga0075426_10345158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1093Open in IMG/M
3300006904|Ga0075424_101458729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia726Open in IMG/M
3300006954|Ga0079219_10059705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1689Open in IMG/M
3300006954|Ga0079219_10291629All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300009093|Ga0105240_11780325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria642Open in IMG/M
3300009148|Ga0105243_12155735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria593Open in IMG/M
3300009162|Ga0075423_10322360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Hoyosella → Hoyosella subflava1620Open in IMG/M
3300009162|Ga0075423_12230189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia595Open in IMG/M
3300009545|Ga0105237_11925064Not Available599Open in IMG/M
3300009551|Ga0105238_13076439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii500Open in IMG/M
3300010376|Ga0126381_100133962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3228Open in IMG/M
3300010376|Ga0126381_101042739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1180Open in IMG/M
3300010396|Ga0134126_11893106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii653Open in IMG/M
3300010396|Ga0134126_12673362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii542Open in IMG/M
3300010400|Ga0134122_13126976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii518Open in IMG/M
3300010401|Ga0134121_10162075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1914Open in IMG/M
3300010866|Ga0126344_1392102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia554Open in IMG/M
3300010867|Ga0126347_1332932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia871Open in IMG/M
3300011119|Ga0105246_11741528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii593Open in IMG/M
3300012200|Ga0137382_10831642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia665Open in IMG/M
3300012359|Ga0137385_10489186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1042Open in IMG/M
3300012361|Ga0137360_11686733Not Available539Open in IMG/M
3300012971|Ga0126369_10806302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1021Open in IMG/M
3300012988|Ga0164306_10099477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1894Open in IMG/M
3300013104|Ga0157370_11875281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii538Open in IMG/M
3300013307|Ga0157372_10976275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria982Open in IMG/M
3300014745|Ga0157377_10439240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria898Open in IMG/M
3300014969|Ga0157376_12390956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii568Open in IMG/M
3300015371|Ga0132258_11119407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1990Open in IMG/M
3300016319|Ga0182033_10799543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria831Open in IMG/M
3300016319|Ga0182033_11275791Not Available659Open in IMG/M
3300016422|Ga0182039_11710363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia575Open in IMG/M
3300017937|Ga0187809_10332053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia566Open in IMG/M
3300018034|Ga0187863_10301271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia891Open in IMG/M
3300021171|Ga0210405_10182470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1664Open in IMG/M
3300021402|Ga0210385_10610035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia832Open in IMG/M
3300021405|Ga0210387_11773203All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300021407|Ga0210383_11394723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii583Open in IMG/M
3300021432|Ga0210384_10245961All Organisms → cellular organisms → Bacteria1609Open in IMG/M
3300021474|Ga0210390_11318120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia578Open in IMG/M
3300021475|Ga0210392_10937335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia648Open in IMG/M
3300021478|Ga0210402_10385242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1302Open in IMG/M
3300021478|Ga0210402_10477094All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300021559|Ga0210409_11656713Not Available516Open in IMG/M
3300025574|Ga0208717_1036525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1219Open in IMG/M
3300025898|Ga0207692_11033559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii543Open in IMG/M
3300025898|Ga0207692_11036824All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6542Open in IMG/M
3300025899|Ga0207642_10114354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1380Open in IMG/M
3300025900|Ga0207710_10785847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii501Open in IMG/M
3300025915|Ga0207693_10421327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1044Open in IMG/M
3300025915|Ga0207693_10537077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria912Open in IMG/M
3300025928|Ga0207700_10533492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1040Open in IMG/M
3300025929|Ga0207664_10020286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4923Open in IMG/M
3300025929|Ga0207664_10261888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1512Open in IMG/M
3300025929|Ga0207664_11468331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii603Open in IMG/M
3300026078|Ga0207702_11133368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii776Open in IMG/M
3300026121|Ga0207683_10403618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1257Open in IMG/M
3300026899|Ga0209326_1002265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1565Open in IMG/M
3300027676|Ga0209333_1064509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1006Open in IMG/M
3300027889|Ga0209380_10287033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia967Open in IMG/M
3300027898|Ga0209067_10426945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia745Open in IMG/M
3300027908|Ga0209006_10450355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia1078Open in IMG/M
3300031234|Ga0302325_10101706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5379Open in IMG/M
3300031546|Ga0318538_10081815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1641Open in IMG/M
3300031572|Ga0318515_10281846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia891Open in IMG/M
3300031640|Ga0318555_10067990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales1836Open in IMG/M
3300031680|Ga0318574_10276642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia973Open in IMG/M
3300031718|Ga0307474_11393487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium553Open in IMG/M
3300031744|Ga0306918_10416838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1047Open in IMG/M
3300031751|Ga0318494_10428748Not Available768Open in IMG/M
3300031754|Ga0307475_11435920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia531Open in IMG/M
3300031769|Ga0318526_10093076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1198Open in IMG/M
3300031771|Ga0318546_10098055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales1919Open in IMG/M
3300031777|Ga0318543_10470721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii563Open in IMG/M
3300031781|Ga0318547_10395281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii848Open in IMG/M
3300031781|Ga0318547_10787979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii592Open in IMG/M
3300031798|Ga0318523_10457915Not Available632Open in IMG/M
3300031846|Ga0318512_10633627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii546Open in IMG/M
3300031894|Ga0318522_10306627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii602Open in IMG/M
3300031912|Ga0306921_11348819Not Available787Open in IMG/M
3300031941|Ga0310912_10606200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria852Open in IMG/M
3300031946|Ga0310910_10210852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1509Open in IMG/M
3300032067|Ga0318524_10408660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia708Open in IMG/M
3300032068|Ga0318553_10104647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1445Open in IMG/M
3300032180|Ga0307471_104224133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii507Open in IMG/M
3300032955|Ga0335076_10130796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2431Open in IMG/M
3300033134|Ga0335073_10040169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6337Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.47%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.24%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.24%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil4.24%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.39%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.39%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.54%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.69%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.85%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.85%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025574Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026899Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FE1_044586802189573002Grass SoilVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERGQAAPEPDAVWAARPPGAA
JGI12269J14319_1013491923300001356Peatlands SoilNRGNNGAIEFTWRGLELIVGNYYVLTLLVFIAATACALVLTGRLRPERAQSAPEPDAVWAARPPGVAR*
JGIcombinedJ51221_1016397323300003505Forest SoilAVEFTWRGLELIVGNYYVLTLLVFIAATACALVRTRRLRPERAVGPPEPDTVWAARPPGVAR*
Ga0070682_10043935513300005337Corn RhizosphereNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070682_10206279213300005337Corn RhizosphereNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWTARPPGVAQ*
Ga0068868_10182677413300005338Miscanthus RhizosphereLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWTARPPGVAQ*
Ga0070709_1037951833300005434Corn, Switchgrass And Miscanthus RhizosphereRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRFRPERVQSAPEPDAVWAARPPGVAQ*
Ga0070714_10006969513300005435Agricultural SoilSRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRFRPERVQSAPEPDAVWAARPPGVAQ*
Ga0070714_10149590823300005435Agricultural SoilNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070710_1009755533300005437Corn, Switchgrass And Miscanthus RhizosphereGNSRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRFRPERVQSAPEPDAVWAARPPGVAQ*
Ga0070710_1137235013300005437Corn, Switchgrass And Miscanthus RhizosphereLLLLAPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070705_10073089113300005440Corn, Switchgrass And Miscanthus RhizosphereAPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ*
Ga0070678_10030826313300005456Miscanthus RhizosphereNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ*
Ga0070681_1041926723300005458Corn RhizosphereLAPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070681_1204220013300005458Corn RhizosphereATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070684_10047839333300005535Corn RhizospherePNGDNSGAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPGPDAVWAARPPGVAR*
Ga0070697_10186727513300005536Corn, Switchgrass And Miscanthus RhizosphereVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPPGVAR*
Ga0070730_1071811813300005537Surface SoilEFTWRGLELIVGNYYVLTLLVFIAATACALAPVASVLSARRRPTAPDAVSAARPPGVAR*
Ga0070665_10220555523300005548Switchgrass RhizosphereGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0070664_10070650113300005564Corn RhizosphereDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0068854_10168965513300005578Corn RhizosphereLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ*
Ga0068852_10128125613300005616Corn RhizosphereNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ*
Ga0070766_1054682323300005921SoilLLLAPNRGNNGTVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRFRPERAVGPEPDAVWEARPPGVAR*
Ga0070765_10131542723300006176SoilLELIIGNYYVLTLLVFIAATACALVLSRRLRPERAVGPQPDAVSAARPPGVAQ*
Ga0074053_1002148333300006575SoilAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRHERAQSVPEPDAVWAARPPGVAQ*
Ga0074047_1207545723300006576SoilLAPNRGNNRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSASEPDAVWAARPPGVAR*
Ga0079221_1009575623300006804Agricultural SoilGLELIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVSAARPPGVAQ*
Ga0075433_1051688723300006852Populus RhizosphereRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPERVAVWAARPPGVARQGDQLPERKAL*
Ga0075425_10102638923300006854Populus RhizosphereLELIVGNYYVLTLLVFIAATACALVLTRRLRPERTQSAPEPDAVWAARPPGVAR*
Ga0075434_10008307443300006871Populus RhizosphereRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPHGIAR*
Ga0068865_10105548123300006881Miscanthus RhizosphereNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWAARPPGVAQ*
Ga0075426_1034515813300006903Populus RhizosphereNHRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPHGIAR*
Ga0075424_10145872913300006904Populus RhizosphereELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPHGIAR*
Ga0079219_1005970533300006954Agricultural SoilFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAR*
Ga0079219_1029162923300006954Agricultural SoilLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVSAARPPGVAR*
Ga0105240_1178032513300009093Corn RhizosphereLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0105243_1215573523300009148Miscanthus RhizosphereRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0075423_1032236033300009162Populus RhizosphereLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPDAVWAARPHGIAR*
Ga0075423_1223018923300009162Populus RhizosphereLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPERVAVWAARPPGVARQGDQLPERKAL*
Ga0105237_1192506413300009545Corn RhizosphereAAVEFTWRGLELIVGNYYVLTLLVFIGAPHAPWCLPVASGLSAQSASEPDGVWAARPPGVAR*
Ga0105238_1307643913300009551Corn RhizosphereEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ
Ga0126381_10013396213300010376Tropical Forest SoilWRGLELIAGNYYVLTLLVFIAATACALELTRRLRPERAQSAPEPDAMWAARPPGVGR*
Ga0126381_10104273923300010376Tropical Forest SoilELIVGNYYVLTLLVFIAATACALVLTRHLRPERAQSAPEPDAVWAARPPGVAR*
Ga0134126_1189310613300010396Terrestrial SoilPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0134126_1267336223300010396Terrestrial SoilPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0134122_1312697613300010400Terrestrial SoilRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0134121_1016207523300010401Terrestrial SoilGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0126344_139210223300010866Boreal Forest SoilLELIVGNYYVLTLLVFIAATAYALVLTRRLRPECAQSAPEPDAVWAARPPGVAG*
Ga0126347_133293223300010867Boreal Forest SoilFGTVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTSRLRPERAVGPEPDAVWAARPPGVAP*
Ga0105246_1174152813300011119Miscanthus RhizosphereRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0137382_1083164213300012200Vadose Zone SoilNNGTVEFTWRGLELIVGNYYVITLLVFIGATACALVLTRRLRPERAQSAPEPDAVRAARPPDVAR*
Ga0137385_1048918613300012359Vadose Zone SoilLLAPNRGNSRAAVEFTWRGLELIAGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPGAVWAARPPGVAQ*
Ga0137360_1168673313300012361Vadose Zone SoilIVGNYYVLTLLVFIAATACALVFTRRLRPERAQSAPEPDAVWAARPPGVAQ*
Ga0126369_1080630223300012971Tropical Forest SoilVEFTWRGLELIVGNYYVLTLLVLIAGTACALVLARRLRPERAQSAPEPDAVWAARPPGAAG*
Ga0164306_1009947713300012988SoilAVEFTWRGLELIAGNYYVLILLVFIAATACALVLTRRLRPERARSAPEPDAVWAARPPGVAQ*
Ga0157370_1187528123300013104Corn RhizosphereGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0157372_1097627513300013307Corn RhizosphereVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0157377_1043924013300014745Miscanthus RhizosphereTVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVAQ*
Ga0157376_1239095623300014969Miscanthus RhizosphereGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ*
Ga0132258_1111940713300015371Arabidopsis RhizosphereTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSVPEPDAVWAARPPGVAQ*
Ga0182033_1079954333300016319SoilWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0182033_1127579113300016319SoilNDGAVEFSWHGLQLIVGNYYVLSLLVLIAATACALALTRRLRPGRSLSAPRPDAVWAIRPPGVVR
Ga0182039_1171036323300016422SoilEFIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPEPNAVWAARPPGVGR
Ga0187809_1033205313300017937Freshwater SedimentRGNSRAAVEFTWRGLELIVGNYYVLTLLVFIATTACALVLTRRLRPERAQSAPEPDAVGAAHRP
Ga0187863_1030127113300018034PeatlandNRGNSRAAVEFTWRGLELVVGNYYVLTLLVFIAATACALVLTRHPRPEHAVGPEPGAVRPARPPGVAR
Ga0210405_1018247043300021171SoilEFTWRGLELIVGNYYVLTLLVFIAATACALVLTCRLRPEHAVGPEPDAVWAVRPPGVAR
Ga0210385_1061003523300021402SoilLDLIVGNYYVLTLLVFIAATACALVLTRRLRPERAQSAPGPDAVWAARPPGVAR
Ga0210387_1177320323300021405SoilEFTWRGLELIAGNYYVLTLLVFIAATACALVLTRRVRPELAVGPEPDAVRAARPPDVAR
Ga0210383_1139472313300021407SoilRGLLLLAPNGGNYGTLEFTWRGLELIVGNYYVLTLLVFIAATACALVLRGRQTTQRAPDPDILRAGRSPG
Ga0210384_1024596133300021432SoilAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAVAPEPDAVWEARPPGVA
Ga0210390_1131812013300021474SoilEFTWRGLELIIGNYYVLTLLVFIAATACALVLTRRLRPERPQSAPEPDAAWAVRPPGVAR
Ga0210392_1093733523300021475SoilRGLELVVGNYYVLTLLVFIAATACALVLTRRRGPERAVGPEPDAVWAARPPGVAR
Ga0210402_1038524223300021478SoilLLAPNRGNDRATVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAQPTPEPDGMSAARPPGVAR
Ga0210402_1047709413300021478SoilNRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAVAPEPDAVWEARPPGVAP
Ga0210409_1165671313300021559SoilGNSRTAVEFTWRGLELVVGNYYVLTLLVFIAATACALVLTRRLGPERAVGPEPDAVWAARPPGVAR
Ga0208717_103652523300025574Arctic Peat SoilRGAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRHRPGRAVGPEPGAVRAARPPGVAR
Ga0207692_1103355913300025898Corn, Switchgrass And Miscanthus RhizosphereVEFTWRGLELIVGNYYVVTLLVFIAATACALLLTRRLGPERAQSAPEPDAVWAAHPPGAQ
Ga0207692_1103682413300025898Corn, Switchgrass And Miscanthus RhizosphereRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTCRLRPEHAVGPEPDAVWAVRPPGVAR
Ga0207642_1011435413300025899Miscanthus RhizosphereGHNGTVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWAARPPGVAQ
Ga0207710_1078584713300025900Switchgrass RhizosphereGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ
Ga0207693_1042132723300025915Corn, Switchgrass And Miscanthus RhizosphereVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPEPDAAWAARPPGVA
Ga0207693_1053707723300025915Corn, Switchgrass And Miscanthus RhizosphereGLLLLAPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLGPERAQSAPKPDAVWAARPPGVAQ
Ga0207700_1053349213300025928Corn, Switchgrass And Miscanthus RhizosphereWRGLELIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWTARPPGVAQ
Ga0207664_1002028613300025929Agricultural SoilSRAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRFRPERVQSAPEPDAVWAARPPGVAQ
Ga0207664_1026188823300025929Agricultural SoilLAPNRGNSGTVEFTWRGLELIVGNYYVLTLLVFIAATACALLLTRRLGPERAQSAPEPDAVWAAHPPGAQ
Ga0207664_1146833113300025929Agricultural SoilWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAVWTARPPGVAQ
Ga0207702_1113336823300026078Corn RhizosphereATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLGPERAQSAPEPDAAWAARPPGVAQ
Ga0207683_1040361813300026121Miscanthus RhizosphereLAPNRGNRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ
Ga0209326_100226523300026899Forest SoilRATVEFTWRGLDLIVGNYYVLTLLVFIAATACALVLSRRLRPERAQSTPEPDAVWAARPPGVAQ
Ga0209333_106450913300027676Forest SoilRGLELIVGNYYVLTLLVFIAATACALVLTRRLKSERAVGPEPDAVWAARPPGVAR
Ga0209380_1028703323300027889SoilRGNNGTVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLRPERAVGPEPDAVWEARPPGVAR
Ga0209067_1042694523300027898WatershedsLLLAPNEGNGGAVEFTWRGLELIVGNYYVLTLLVFIAATACVLVLTRRLRPERAHSAPEPDAVWAARPPSVAR
Ga0209006_1045035513300027908Forest SoilSRAAVEFTWRGPELIVGNYYVLTLLVFIAATAWALVLTRRLRPERATGPEPDAVRAARHSGTDRGSDREHDFNQLQCSHE
Ga0302325_1010170683300031234PalsaAPNRGNNRAAVEFTWHGLELIVGHYYVLTLLVFIAATACALVLTRRLRPERAQSAPGPDAVWAARPPGVAR
Ga0318538_1008181533300031546SoilNQGAVEFTWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0318515_1028184623300031572SoilEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLRPERAKSAPEPDAVWAARPPGAGR
Ga0318555_1006799033300031640SoilNAAAIEFTWRGLDLIVGNYYVLTLLVFIAATACALVLTRRLRPERAKSAPEPDAVWAARPPGAGR
Ga0318574_1027664213300031680SoilLLLLAPNRGNQGAVEFTWRGLELVVGNYYVLTLLVFIGATAGALVLTRRFRPERAQSAPEPDAVWAARPPGVAL
Ga0307474_1139348713300031718Hardwood Forest SoilLLLLAPNRGNEGAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRPRPERAVGPEPDAVWAVRPPGVARGHG
Ga0306918_1041683833300031744SoilELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0318494_1042874813300031751SoilELIVGNYYVLTLLVFIAATACALVLTRRVRPERAQSASEPDAVWAARPPGVAR
Ga0307475_1143592023300031754Hardwood Forest SoilRGLELIVGNYYVLTLLVFIAATACALVLSRRLRPERAVGPEPVAAWAARPPGVAR
Ga0318526_1009307633300031769SoilNHGNQGAVEFTWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVVR
Ga0318546_1009805533300031771SoilFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRPRPEPAQSAPEPDAVWAARPPGVTR
Ga0318543_1047072113300031777SoilLLLLAPNRGNKGTVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRVRPERAQSASEPDAVWAARPPGVAR
Ga0318547_1039528123300031781SoilLLLAPNRGNSRTAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRVRPERAQSASEPDAVWAARPPGVAR
Ga0318547_1078797923300031781SoilNKGAIEFTWRGLELIVGNYYVLILLVFIAATACALVLARRLGPEHAQSASEPDVMWAARPPGVAR
Ga0318523_1045791513300031798SoilLELIVGNYYVLTLLVFIAATVCALVLARRLRPERAQPAPELDAVWSARPPGVAR
Ga0318512_1063362713300031846SoilAIEFTWRGLELIVGNYYVLILLVFIAATACALVLARRLGPEHAQSASEPDVMWAARPPGVAR
Ga0318522_1030662723300031894SoilLIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0306921_1134881913300031912SoilLELIVGNYYVLTLLVFIAATACALVLTRRLRPEHAQSPPEPDAAWAARPPGVAR
Ga0310912_1060620033300031941SoilLLAPNRGNQGAVEFTWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0310910_1021085213300031946SoilGNQGAVEFTWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVVR
Ga0318524_1040866023300032067SoilTWRGLELIIGNYYVLTLLVFIAATACALVLTRRLRPERARSAPAPDAVWAARSVSSG
Ga0318553_1010464733300032068SoilQGAVEFTWHGLELIAGNYYVLTLLVFIAATACALVLTRRLGPERAQSASEPDAVRAARPPGVAR
Ga0307471_10422413323300032180Hardwood Forest SoilAAVEFTWRGLELIVGNYYVLTLLVFIAATACALVLTRRLGPERAVSPEPDAVRAARPPGVAR
Ga0335076_1013079633300032955SoilLLLLAPNGGNRGAVEFTWRGLESIVGNYYVLTLLVFVAATACALVLTRRLRPERTQPTREPDPVWAARPPGAAR
Ga0335073_1004016923300033134SoilLLLLAPNGGNRGAVEFTWRGLESIVGNYYVLILLVFVAATACALVLTRRLRPERTQPTREPDAVWAARPPGAAR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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