Metagenome / Metatranscriptome Family F076352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076352
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	58 residues
Representative Sequence	VAGGYTSAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT
Number of Associated Samples	102
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.36 %
% of genes near scaffold ends (potentially truncated)	40.68 %
% of genes from short scaffolds (< 2000 bps)	74.58 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.068 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.339 % of family members)
Environment Ontology (ENVO)	Unclassified (25.424 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.30% β-sheet: 0.00% Coil/Unstructured: 74.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF13185	GAF_2	8.47
PF12802	MarR_2	3.39
PF03861	ANTAR	2.54
PF11139	SfLAP	2.54
PF07885	Ion_trans_2	2.54
PF05988	DUF899	1.69
PF01594	AI-2E_transport	1.69
PF00781	DAGK_cat	1.69
PF00106	adh_short	0.85
PF13191	AAA_16	0.85
PF02627	CMD	0.85
PF13561	adh_short_C2	0.85
PF00856	SET	0.85
PF06742	DUF1214	0.85
PF00903	Glyoxalase	0.85
PF03781	FGE-sulfatase	0.85
PF02371	Transposase_20	0.85
PF01717	Meth_synt_2	0.85
PF01740	STAS	0.85
PF00378	ECH_1	0.85
PF12679	ABC2_membrane_2	0.85
PF00464	SHMT	0.85
PF00285	Citrate_synt	0.85
PF13673	Acetyltransf_10	0.85
PF13683	rve_3	0.85
PF02230	Abhydrolase_2	0.85
PF02687	FtsX	0.85
PF09339	HTH_IclR	0.85
PF12697	Abhydrolase_6	0.85
PF12867	DinB_2	0.85
PF13490	zf-HC2	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	3.39
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	2.54
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.69
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.69
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.85
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.85
COG0372	Citrate synthase	Energy production and conversion [C]	0.85
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.85
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.85
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.85
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.07 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.07 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.07 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.93 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	32.20 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	32.20 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	32.20 %
Unclassified	root	N/A	5.93 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	32.20 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	24.58 %
Unclassified	root	N/A	5.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	32.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.58 %
Unclassified	root	N/A	5.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101977174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	760	Open in IMG/M
3300005435\|Ga0070714_100590035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300005436\|Ga0070713_100896510	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	853	Open in IMG/M
3300005439\|Ga0070711_100150659	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1753	Open in IMG/M
3300005445\|Ga0070708_101674396	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	591	Open in IMG/M
3300005451\|Ga0066681_10786430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005467\|Ga0070706_100026501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5332	Open in IMG/M
3300005471\|Ga0070698_100068492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3566	Open in IMG/M
3300005952\|Ga0080026_10002793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4136	Open in IMG/M
3300005994\|Ga0066789_10024818	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300005995\|Ga0066790_10429427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300006049\|Ga0075417_10142626	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1111	Open in IMG/M
3300006175\|Ga0070712_100210280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1533	Open in IMG/M
3300006175\|Ga0070712_100468323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1052	Open in IMG/M
3300006354\|Ga0075021_10435544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300006804\|Ga0079221_10104885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300006844\|Ga0075428_100096057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3230	Open in IMG/M
3300006852\|Ga0075433_10030654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4590	Open in IMG/M
3300006854\|Ga0075425_100159976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2583	Open in IMG/M
3300006871\|Ga0075434_100115649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2695	Open in IMG/M
3300006914\|Ga0075436_100112798	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1898	Open in IMG/M
3300009089\|Ga0099828_10164027	Not Available	1970	Open in IMG/M
3300009090\|Ga0099827_10180367	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300009090\|Ga0099827_10634527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300009137\|Ga0066709_101825736	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	851	Open in IMG/M
3300009147\|Ga0114129_12525491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300009156\|Ga0111538_10052230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5234	Open in IMG/M
3300009672\|Ga0116215_1510193	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	520	Open in IMG/M
3300009683\|Ga0116224_10411479	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	643	Open in IMG/M
3300009824\|Ga0116219_10477908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300010154\|Ga0127503_10468885	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	606	Open in IMG/M
3300010335\|Ga0134063_10613067	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300010379\|Ga0136449_100701182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300010379\|Ga0136449_101403555	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1078	Open in IMG/M
3300010396\|Ga0134126_10601813	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1258	Open in IMG/M
3300010396\|Ga0134126_11840774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300010856\|Ga0126358_1115184	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	717	Open in IMG/M
3300010861\|Ga0126349_1324416	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	677	Open in IMG/M
3300010862\|Ga0126348_1269217	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	764	Open in IMG/M
3300010864\|Ga0126357_1293138	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	714	Open in IMG/M
3300010865\|Ga0126346_1356252	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	749	Open in IMG/M
3300010867\|Ga0126347_1388778	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2046	Open in IMG/M
3300010869\|Ga0126359_1035812	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	590	Open in IMG/M
3300010876\|Ga0126361_11181498	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	584	Open in IMG/M
3300010880\|Ga0126350_10437994	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	957	Open in IMG/M
3300010880\|Ga0126350_11897374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300011120\|Ga0150983_10203121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300011269\|Ga0137392_10184547	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1700	Open in IMG/M
3300012198\|Ga0137364_10117755	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300012201\|Ga0137365_10004624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11040	Open in IMG/M
3300012201\|Ga0137365_10018269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5473	Open in IMG/M
3300012201\|Ga0137365_10041652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3503	Open in IMG/M
3300012201\|Ga0137365_10624595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300012204\|Ga0137374_10018078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	8046	Open in IMG/M
3300012207\|Ga0137381_10056138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3264	Open in IMG/M
3300012209\|Ga0137379_11500848	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	575	Open in IMG/M
3300012210\|Ga0137378_11325139	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	635	Open in IMG/M
3300012349\|Ga0137387_10155961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1627	Open in IMG/M
3300012356\|Ga0137371_10202988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1552	Open in IMG/M
3300012356\|Ga0137371_10415940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300012357\|Ga0137384_10167423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300012357\|Ga0137384_10390864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300012924\|Ga0137413_11640760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012929\|Ga0137404_11057990	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	743	Open in IMG/M
3300013297\|Ga0157378_11364095	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	751	Open in IMG/M
3300014166\|Ga0134079_10685495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300014326\|Ga0157380_13161679	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	526	Open in IMG/M
3300014745\|Ga0157377_10348806	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	992	Open in IMG/M
3300015242\|Ga0137412_10066415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2935	Open in IMG/M
3300015371\|Ga0132258_10867672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2278	Open in IMG/M
3300015373\|Ga0132257_100886788	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1117	Open in IMG/M
3300015374\|Ga0132255_103320644	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	685	Open in IMG/M
3300017659\|Ga0134083_10599465	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	503	Open in IMG/M
3300017823\|Ga0187818_10048680	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1821	Open in IMG/M
3300018482\|Ga0066669_10712469	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	884	Open in IMG/M
3300020583\|Ga0210401_11315016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300021178\|Ga0210408_11159986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300021403\|Ga0210397_11205505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300021407\|Ga0210383_10672535	Not Available	891	Open in IMG/M
3300021407\|Ga0210383_10869656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300021420\|Ga0210394_11597409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300021474\|Ga0210390_10803730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300021478\|Ga0210402_10067644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3152	Open in IMG/M
3300021478\|Ga0210402_10627794	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	995	Open in IMG/M
3300021478\|Ga0210402_11150808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300025475\|Ga0208478_1044902	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	845	Open in IMG/M
3300025527\|Ga0208714_1097556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300025588\|Ga0208586_1001744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6579	Open in IMG/M
3300025627\|Ga0208220_1081234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300025633\|Ga0208480_1009710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3129	Open in IMG/M
3300025906\|Ga0207699_11016828	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	613	Open in IMG/M
3300025910\|Ga0207684_10041728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3889	Open in IMG/M
3300025915\|Ga0207693_10472051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300025915\|Ga0207693_10639738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300025916\|Ga0207663_11747993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300025922\|Ga0207646_10221712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1708	Open in IMG/M
3300025928\|Ga0207700_10591042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300025939\|Ga0207665_10413796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300026217\|Ga0209871_1047565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300026294\|Ga0209839_10004674	All Organisms → cellular organisms → Bacteria	6374	Open in IMG/M
3300027854\|Ga0209517_10443696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300027873\|Ga0209814_10039811	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300027882\|Ga0209590_10010207	All Organisms → cellular organisms → Bacteria	4361	Open in IMG/M
3300027907\|Ga0207428_10159985	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1710	Open in IMG/M
3300028792\|Ga0307504_10297684	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	606	Open in IMG/M
3300028819\|Ga0307296_10041927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2415	Open in IMG/M
3300028884\|Ga0307308_10439688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300031720\|Ga0307469_10037038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2915	Open in IMG/M
3300031740\|Ga0307468_100095143	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1751	Open in IMG/M
3300031754\|Ga0307475_10477049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1002	Open in IMG/M
3300032160\|Ga0311301_10437354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1978	Open in IMG/M
3300032160\|Ga0311301_10941997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1154	Open in IMG/M
3300034817\|Ga0373948_0027552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1126	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.75%
Host-Associated	Host-Associated	15.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.36%
Plants	Host-Associated → Plants	15.25%
Aquatic	Environmental → Aquatic	3.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.71%
Freshwater	Environmental → Aquatic → Freshwater	2.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.54%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.71%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.32%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	8.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.69%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1019771743	3300004092	Bog Forest Soil	EGGYTDVFELICCDCGDHPYLDYSQVSPRLQCLRGPRALEAGLAAYERHLGLIRNA*
Ga0070714_1005900352	3300005435	Agricultural Soil	VAGGYTSAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0070713_1008965101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKGPVACGYTGAFELICYECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0070711_1001506592	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQSWAEGGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0070708_1016743962	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RIVEGRMKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYPLEAGLRAYAEHLG*
Ga0066681_107864302	3300005451	Soil	RVEGGYTGAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAACEKHLALTA*
Ga0070706_1000265011	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEGGYTGAFELICYECGDHAYLDYSQISHRLQQIRGPYTMRESLAAYEKHLGLTT*
Ga0070698_1000684922	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VEGGYTGAFELICYECGDHSYLDYSQISHRLQQIRGPYTMRESLAAYEKHLGLTT*
Ga0080026_100027934	3300005952	Permafrost Soil	VEGGYTDAFELICPECGDHPYVDYRDIPPRLQRIRGPYPLKAGLRAYEEHLGQTG*
Ga0066789_100248183	3300005994	Soil	MEGGYTDAFELICCECGDHPYVDYRDIPPRLQRIRGPYPMEAGLRAYEEHLGQTN*
Ga0066790_104294271	3300005995	Soil	LICCQCGDHPYLDYSEISPRLQRIRGPYTIEAGLAAYEKHLGLTG*
Ga0075417_101426261	3300006049	Populus Rhizosphere	VEGGYTDAFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT*
Ga0070712_1002102802	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VEGGYTEAFELICCDCGDDPYLDYSQISFRLQQIRGPYTMRAGIAAYKQHLGLNA*
Ga0070712_1004683234	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0075021_104355441	3300006354	Watersheds	VTGRVESGYTGAFELICYECGDHPYLDYSEISRRLQRIRGPYTMRAGLAAYQKHLGLTT*
Ga0079221_101048852	3300006804	Agricultural Soil	ATSVGGYASAFELICCECGDHPDLDYSEISPRLQRIRGPYTIRAGLAAYEKHLALTI*
Ga0075428_1000960571	3300006844	Populus Rhizosphere	DAFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT*
Ga0075433_100306548	3300006852	Populus Rhizosphere	MEGGYPDAFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT*
Ga0075425_1001599764	3300006854	Populus Rhizosphere	VQGRVERGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0075434_1001156491	3300006871	Populus Rhizosphere	VQGRVERGYTDAFELICRECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0075436_1001127983	3300006914	Populus Rhizosphere	VQGRVEGGYTDAFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT*
Ga0075435_1004866361	3300007076	Populus Rhizosphere	TGAYEVICRDCGDHPYLDYSAIPRRLQRIRGPYTLEAGVAAYAEHLGLTTSQRRS*
Ga0099828_101640272	3300009089	Vadose Zone Soil	MASLRRQPARIVQRRAEGGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0099827_101803671	3300009090	Vadose Zone Soil	PARIVEGRGDGGYTDAFELICCECGDHPYLDYSEISRRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0099827_106345271	3300009090	Vadose Zone Soil	MPAAGEPGHGTEASLRRQPAGIVLGRMDGGYTGAFEIICCDCGDRPYWDYSEIPFQLQRTRGPYTLHAGIAAYERHLGLDT*
Ga0066709_1018257361	3300009137	Grasslands Soil	VEGGYTDAFELICCKCGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT*
Ga0114129_125254911	3300009147	Populus Rhizosphere	GAFELICYECGDQPYLDYSEISHRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0111538_100522303	3300009156	Populus Rhizosphere	VEGGYTDAFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT*
Ga0116215_15101931	3300009672	Peatlands Soil	QPARIVDGRMEGGYTGAFELICPSCGDHPYLDYPEVSPRLQRIRGPYTLEAGVAAHAEHLGLTTSRRRS*
Ga0116224_104114792	3300009683	Peatlands Soil	GRTAYLRRQPARIVDGRMEGGYTGAFELICPSCGDHPYLDYPEVSPRLQRIRGPYTLEAGVAAHAEHLGLTTSRRRS*
Ga0116219_104779081	3300009824	Peatlands Soil	ACLRRQPARIVDGRMEGGYTGAFELVCGQCGDHPYLDYSEIPLRLQQIRGPYTLEEGLAAYANHLGLGD*
Ga0127503_104688851	3300010154	Soil	MKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYPLEAGLRAYAEHLG*
Ga0134063_106130672	3300010335	Grasslands Soil	DGHTGVFELICPGCGDHPYVDFREVPLQLQQIRGPYVLQAGLAAYEEHLGLLSQPEA*
Ga0136449_1007011822	3300010379	Peatlands Soil	MEGGYTGAFELICGLCGDHPYLDYSQIPPRLQQIRRPYPLQAGVAAYENHLGPETGA*
Ga0136449_1014035551	3300010379	Peatlands Soil	MAFLRRQPARIVDGRIEGGYTSTFELIGPSCGDYPYLDYSEVPARLQWLRGSCTLEASLAEYDKHLGLLSRPDL*
Ga0134126_106018133	3300010396	Terrestrial Soil	MKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYPLEAGLR
Ga0134126_118407741	3300010396	Terrestrial Soil	TLRRRPARIMQDWAAGGYTGAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0126358_11151841	3300010856	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDLPPRLQRIRGPYPLEAGLRAYEEHLGRTS*
Ga0126349_13244162	3300010861	Boreal Forest Soil	MEGGYTDMFELICGECGDHPYVDYRDIPPRLQRIRGPYMLEAGLRAYEEHLGRTS*
Ga0126348_12692171	3300010862	Boreal Forest Soil	MEGGYTDAFELICGECGDHPYVDYRDIPPRLQRLRGPYSLEAGLRAYEEHLGQAS*
Ga0126357_12931381	3300010864	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDLPPRLQRIRGPYMLEAGLRAYEEHLGQTS*
Ga0126346_13562521	3300010865	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYPLEAGLRAYEEHLGRTS*
Ga0126347_13887781	3300010867	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDIPSRLQRIRGPYPLEAGLRAYEEHLGRTS*
Ga0126359_10358121	3300010869	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYLLEAGLRAYEEHLGRTS*
Ga0126361_111814981	3300010876	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDIPSRLQRIRGPYPLEAGLRAYEEHLGQTS*
Ga0126350_104379941	3300010880	Boreal Forest Soil	MEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYMLEAGLRAYEEHLGQTS*
Ga0126350_118973741	3300010880	Boreal Forest Soil	MVDGRVEARHTGAFELICCECGDHPYLDYSQISPHLRRIRGPYTLADGLAAYEQHLG
Ga0150983_102031211	3300011120	Forest Soil	VTGRVESGYTGAFELICYECGDHPYLDYSEISRRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0137392_101845471	3300011269	Vadose Zone Soil	VQRRAEGGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0137364_101177551	3300012198	Vadose Zone Soil	VEGRVEGGYTGAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAGYQNHLGLTI*
Ga0137365_1000462410	3300012201	Vadose Zone Soil	VRRQPARTVEGRVEGGYTGAFELICCECGDHPYLDYSEVSPRLQRIRGPYTMRAGLAAYENHLGLTT*
Ga0137365_100182691	3300012201	Vadose Zone Soil	DAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGIAAYEKHLALTT*
Ga0137365_100416524	3300012201	Vadose Zone Soil	QPTRIVKGRLEGGYTGAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRVGLAAYENHLGLTT*
Ga0137365_106245951	3300012201	Vadose Zone Soil	TDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTV*
Ga0137374_1001807810	3300012204	Vadose Zone Soil	MDGGYTGAFEVICCDCGDRPYRDYAEIPFQLQRIRGPYTLDAGLAAYEQHLGLAT*
Ga0137381_100561382	3300012207	Vadose Zone Soil	MDGGYTGAFEVICCDCGDRPYWDYAEIPFQLQRIRGPYPLDAGLAAYEQHLGLAT*
Ga0137379_115008482	3300012209	Vadose Zone Soil	MDGGYTGAFEVICCDCGDRPYWDYAEIPFQLQRIRGPYTLDAGLAAYEQHLGLAT*
Ga0137378_113251391	3300012210	Vadose Zone Soil	VQSWAEGGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAHENHLGLTT*
Ga0137377_119729601	3300012211	Vadose Zone Soil	VDGRVEGGAFELICCECGDNPYLDYSQVSPRLQQIRGPYTIAEGLAAYEQHLGLTTCDCPR*
Ga0137387_101559611	3300012349	Vadose Zone Soil	VEGGYTDAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEK
Ga0137371_102029881	3300012356	Vadose Zone Soil	VEGRGEGGYTDAFELICCECGDHHYLDYSEISRRLQRIRGPYTMRAGLAAHEKHLGLTT*
Ga0137371_104159401	3300012356	Vadose Zone Soil	RQPARIVQGRVEGGYTDAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGIAAYEKHLALTT*
Ga0137384_101674232	3300012357	Vadose Zone Soil	VRRQPARTVEGRVEGGYTGAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0137384_103908642	3300012357	Vadose Zone Soil	VEGRVEGGYTGAFELICCECGDHPYPDYSEISPRLQRIRGPYTMRAGLAAYENHLGLTT*
Ga0137413_113085501	3300012924	Vadose Zone Soil	VDGRVEGGAFELICCECGDNPYLDYSQISPRLQQIRGPYTIAEGLAAYEQHLGLTTCDCPR*
Ga0137413_116407601	3300012924	Vadose Zone Soil	AFEIICCECGDHRDLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0137404_110579901	3300012929	Vadose Zone Soil	VEGGYTDAFELICCECGDHRDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0157378_113640952	3300013297	Miscanthus Rhizosphere	MKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYPLEGG
Ga0134079_106854951	3300014166	Grasslands Soil	QPAHIEEGQLEGGYTGAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEKHRSLTSY*
Ga0157380_131616792	3300014326	Switchgrass Rhizosphere	MKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYPLEAGLRAYAEHLGQASGQRE
Ga0157377_103488061	3300014745	Miscanthus Rhizosphere	MKGGYTDVFELICGECGDHPYLDYREIPPRLQLIRGPYSLEAGLRAYAEHLGQ
Ga0137412_100664151	3300015242	Vadose Zone Soil	AFEIICCECGDHRDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT*
Ga0132258_108676722	3300015371	Arabidopsis Rhizosphere	VEGGYTDVFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT*
Ga0132257_1008867882	3300015373	Arabidopsis Rhizosphere	VEGGYTDVFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGTAAYEKHLALTT*
Ga0132255_1033206441	3300015374	Arabidopsis Rhizosphere	MEGGYPDAFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT*
Ga0134083_105994651	3300017659	Grasslands Soil	VEGGYTDAFELICCKCGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT
Ga0187818_100486804	3300017823	Freshwater Sediment	IADGRIQGGYTGVYELICPSCGDHPYLDYSEIPPRLQRLRGPRTLEAALAEYHQHLGLAEDCS
Ga0066669_107124691	3300018482	Grasslands Soil	MEGGYTDAFELICPSCGDRAYLDYSEISPQLQSLRGPYPLETGLAAYERHLGLTT
Ga0210401_113150162	3300020583	Soil	VDGGYTSAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0210408_111599861	3300021178	Soil	FEPNRVDGGYTSAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0210388_106287311	3300021181	Soil	EGGAFELICCECGDNPHLDYSQVSPRLQQLRGPYPIAEGLAAYERHLGLAICDCPR
Ga0210397_112055052	3300021403	Soil	MQGRVDGGYTSAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0210387_105700851	3300021405	Soil	GGYTGLFELICPGCGDHPYLDYSEIPPRLQWLRGPRMLAAALVAYDKHLGRFPA
Ga0210383_106725351	3300021407	Soil	YTGLFALICPSCGDHPYLDYSEVPPRLQWLRGPRTLKGGVAAYEKHLGLALRPDAA
Ga0210383_108696562	3300021407	Soil	NKVDGGYTSAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0210394_115974091	3300021420	Soil	RQPAHIVTGRVESGYTGAFELICYECGDHPYLDYSEISRRLQRIRGPYTMRAGLAAYQKHLGLTT
Ga0210390_108037302	3300021474	Soil	HDRVFEPNRVDGGYTSAFELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0210402_100676441	3300021478	Soil	VTGRVESGYTGAFELICYECGDHPYLDYSEISRRLQRIRGPYTMRAGLAAYQKHLGLTT
Ga0210402_106277941	3300021478	Soil	VQSWAEGGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT
Ga0210402_111508082	3300021478	Soil	FELICCECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTA
Ga0208478_10449022	3300025475	Arctic Peat Soil	VEGRIEGGYTDAFELICGECGDHPCVGYRDIPPRLQQLRGPYPMEAGLRAYEEHLGLAD
Ga0208714_10975562	3300025527	Arctic Peat Soil	RIVDGRMAGGDTGAFELICGQCGDHPYLDYSEIPSWLRQIRGPYTLEAGLAAYENHLGLATGG
Ga0208586_10017445	3300025588	Arctic Peat Soil	MEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYPLEAGLRAYEEHLGQTS
Ga0208220_10812341	3300025627	Arctic Peat Soil	QPARIVAGRMEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYPLEAGLRAYEEHLGQTS
Ga0208480_10097103	3300025633	Arctic Peat Soil	MEGGYTDVFELICGECGDHPYVDYRDIPPRLQRIRGPYMLEAGLRAYEEHLGRTS
Ga0207699_110168282	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MQDWADGGYTSAFELICGECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLALTT
Ga0207684_100417285	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEGGYTGAFELICYECGDHAYLDYSQISHRLQQIRGPYTMRESLAAYEKHLGLTT
Ga0207693_104720511	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GGYTSAFELICCECGDHPYLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT
Ga0207693_106397381	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	CIVEGRAEGGYTDAFELICCECGDHPYLDYREVTPRLQRIRGPYTMREGLAAYEKHLGLT
Ga0207663_117479931	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GGYTSAFELICGECGDHPDLDYSEISPRLQRIRGPYTMRAGLAAYEKHLGLTT
Ga0207646_102217122	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKGRVEGGYTGAFELICYECGDHAYLDYSQISHRLQQIRGPYTMRESLAAYEKHLGLTT
Ga0207700_105910421	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	WAEDGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYERHLGLTT
Ga0207665_104137961	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ASIVQGRMEGGYPDAFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT
Ga0209871_10475652	3300026217	Permafrost Soil	GRTASLRRQPARIVAGRMEGGYTGAFELICGQCGDHPYVDYRDIPARLQRLRGPYPLEAGLRAYEEHLGQAG
Ga0209839_100046742	3300026294	Soil	VEGGYTDAFELICPECGDHPYVDYRDIPPRLQRIRGPYPLKAGLRAYEEHLGQTG
Ga0209517_104436961	3300027854	Peatlands Soil	GRTACLRRQPARIVDGRMEGGYTGAFELVCGQCGDHPYLDYSEIPLRLQQIRGPYTLEEGLAAYANHLGLGD
Ga0209814_100398114	3300027873	Populus Rhizosphere	VEGGYTDAFELICCECGDHPYLDYSEISPRPQWIRGSYTMRAGIAAYEKHLALTT
Ga0209590_100102072	3300027882	Vadose Zone Soil	VEGGYTVGVFEFICCECGDHPYMDYSEISPRLQRIRGPYTMRAGLAAYEKHPGLTT
Ga0207428_101599851	3300027907	Populus Rhizosphere	VEGGYTDAFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT
Ga0307504_102976841	3300028792	Soil	MEGGYTGVFELICPQCGDHPYLDYSEISPRLQRIRGPYTLHAGVAAYEKHLGLAT
Ga0307296_100419272	3300028819	Soil	VEGGYTGAFELICCECGDHPYLDYSEISPRPQRIRGPYTLRAGITAYEKHLALTT
Ga0307308_104396881	3300028884	Soil	GAAPDPASVRRQPAHIEEGQREGGYTGAFELICCECGDHPYLDYSEISPRLQRIPGPYTMRAGLAAYTKHLGLISC
Ga0307469_100370383	3300031720	Hardwood Forest Soil	VQSWAEDGYTDAFELICCECGDHPYLDYSEIPPRLQRIRGPYTMRAGLAAYEKHLGLTT
Ga0307468_1000951431	3300031740	Hardwood Forest Soil	VEGGYTDVFELICCECGDHPYLDYSEISPRPQRIRGSYTMRAGIAAYEKHLALTT
Ga0307475_104770491	3300031754	Hardwood Forest Soil	IVDGRMEGGNTGAFELICPQCGDHPYLDYSEISPRLQRIRGPYTRNAGVAAYEKHLGLAT
Ga0311301_104373541	3300032160	Peatlands Soil	ARIVDGRMEGGYTGAFELICGQCGDHPYLDYSEIPLELQQIRGPYPLEAGLAAYANHLGLGTGG
Ga0311301_109419972	3300032160	Peatlands Soil	MEGGYTGAFELICGLCGDHPYLDYSQIPPRLQQIRRPYPLQAGGAAYENHLGPETGA
Ga0373948_0027552_941_1126	3300034817	Rhizosphere Soil	ERKARCTGAYEVICCDCGDHPYLDYSKIPPRLQRIRGPYTLEAGVAAYAEHLGLTTSRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences