Metagenome / Metatranscriptome Family F076353

Basic Information
Family ID	F076353
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	63 residues
Representative Sequence	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRARRVPGVTIGG
Number of Associated Samples	92
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	3.39 %
% of genes from short scaffolds (< 2000 bps)	11.86 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (86.441 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.864 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.763 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.35% β-sheet: 0.00% Coil/Unstructured: 45.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF03061	4HBT	44.92
PF04672	Methyltransf_19	16.95
PF02746	MR_MLE_N	3.39
PF07498	Rho_N	2.54
PF13378	MR_MLE_C	2.54
PF13271	DUF4062	1.69
PF01047	MarR	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	6.78

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
All Organisms	root	All Organisms	13.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
cellular organisms	root	All Organisms → cellular organisms	13.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	6.78 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	6.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.44 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.85 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120980844	All Organisms → cellular organisms → Bacteria	4865	Open in IMG/M
3300005329\|Ga0070683_100594862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1059	Open in IMG/M
3300005435\|Ga0070714_100728931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	957	Open in IMG/M
3300005529\|Ga0070741_10068462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4029	Open in IMG/M
3300005564\|Ga0070664_100538588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1079	Open in IMG/M
3300006954\|Ga0079219_10269670	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300010867\|Ga0126347_1350050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10160	Open in IMG/M
3300010880\|Ga0126350_11272499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1423	Open in IMG/M
3300012929\|Ga0137404_10583904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1003	Open in IMG/M
3300017937\|Ga0187809_10320359	Not Available	575	Open in IMG/M
3300017946\|Ga0187879_10141605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1363	Open in IMG/M
3300018482\|Ga0066669_10877909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	801	Open in IMG/M
3300021560\|Ga0126371_10325005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1669	Open in IMG/M
3300025929\|Ga0207664_10085077	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300027725\|Ga0209178_1092827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1002	Open in IMG/M
3300031939\|Ga0308174_10838838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	774	Open in IMG/M
3300031996\|Ga0308176_10413681	Not Available	1349	Open in IMG/M
3300032770\|Ga0335085_10992247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.53%
Host-Associated	Host-Associated	8.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.29%
Plants	Host-Associated → Plants	8.47%
Aquatic	Environmental → Aquatic	4.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.78%
Freshwater	Environmental → Aquatic → Freshwater	4.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.24%
Loam	Environmental → Terrestrial → Soil → Loam	28.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	11.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209808446	3300002568	Soil	MMYDMSRQYHAERIMTASERRRADEQAGQLAAGVSRLWQRYLTRPARALRALRVPGVTIGG*
Ga0066817_10115182	3300005146	Soil	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIGG*
Ga0066672_102478672	3300005167	Soil	MMMYDMSRQYHAERIMSAAERRRADDGLGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0066680_100877103	3300005174	Soil	MMMYDTSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0066679_100564335	3300005176	Soil	AERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0066690_109420542	3300005177	Soil	REREDVMTMMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0070683_1005948623	3300005329	Corn Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARTLLGLRMPGVTISG*
Ga0070671_1018575411	3300005355	Switchgrass Rhizosphere	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRAVRMPGATISG*
Ga0070709_109059302	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG*
Ga0070714_1007289312	3300005435	Agricultural Soil	MTMMMYDMGRQYHAERVMSASERRRTDEQAGRMAAEASRLWQRYLTRPARALRALRMPGVTIGG*
Ga0070714_1007834801	3300005435	Agricultural Soil	VMTMMVYDMGRQYHAERVMSAGERRRADAQAGQLAASAAQAWRRAQAWPRYLTGPVRALRSLRLPGATISG*
Ga0070714_1009241382	3300005435	Agricultural Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGQLAASAAQFWQRYFTRAARALRARRVPGVTIGG*
Ga0070714_1015535782	3300005435	Agricultural Soil	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASQLWQRYLTRPARALRARRLPGVTISG*
Ga0070714_1015717662	3300005435	Agricultural Soil	MTMMIYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRVPGATISG*
Ga0070714_1016689072	3300005435	Agricultural Soil	MMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0070714_1017806511	3300005435	Agricultural Soil	MMFYDMTRQYQAERRMSAAEQRRVDEQLGQMAARTSRLWQRATRTTRALRGLRASGVTIGG*
Ga0070714_1018913742	3300005435	Agricultural Soil	MTMMTYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARALRARRMPGVTISG*
Ga0070713_1006507431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAMMFYDMNRQYQAERRMSAAEQRRADEQLGRMAARASGLWRRATRPARVLRGLRVSGVTIGG*
Ga0070713_1012188822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMIYDMTLQHQAERRMSAAEQRRADEQLGRMAARTSQFWRRATRPAQALRGLRASGVTIGG*
Ga0070713_1014434531	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0070711_1004649652	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMMYEMGRQYHAERVMSASERRRTDEQAGRMAAETSRLWQRYLTRPARALRALRMPGVTIGG*
Ga0070711_1009584552	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMTYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLARPARALRALRIPGVTISG*
Ga0070706_1001802412	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWRRATRPARVLRGLRASGVTITW*
Ga0070706_1012020341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMMYDMSRQYHAERIMSAAEQRRADEHLGRMAARTSDVWRRATRPVRVLRGLRASGATIGG*
Ga0070698_1004069034	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QAERRMSAAEQRRADEQLGRMAARASGLWRRATRPARVLRGLRVSGVTIGG*
Ga0070741_100684626	3300005529	Surface Soil	MMMYDMGRQYHAQRVMSAGERRRADEQAGRLAAEASRLWQRYLTRPVQALRALRMPGATISG*
Ga0070679_1012425642	3300005530	Corn Rhizosphere	KREGVMTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG*
Ga0066707_102885591	3300005556	Soil	YDMTRQYQAERRMSAAEQRRADEQLGRMAARTSGLWRRATRPARALRGLRASGVTIGG*
Ga0070664_1005385883	3300005564	Corn Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRRWQRYLARPARALRGLRMPGVTISG*
Ga0068856_1014041591	3300005614	Corn Rhizosphere	GRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRAVRMPGATISG*
Ga0068863_1004938213	3300005841	Switchgrass Rhizosphere	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG*
Ga0070766_111793212	3300005921	Soil	MMTYDMSRQYHAERIMSAAERRRADDELGRMAARTSELRRRATRPVRVLRGLRAAGVTIGG*
Ga0070717_113548352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRARRLPGVTISG*
Ga0070712_1001993723	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RREREDVMTMMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG*
Ga0070765_1005248681	3300006176	Soil	AERIMSAAERRRADEQLGRMAARTSELWRWATRPVRVLRGWPAAGVTIGG*
Ga0079222_103176593	3300006755	Agricultural Soil	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLAGPARALRARRMPGVTISG*
Ga0066665_103003813	3300006796	Soil	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAARTSRLWQRATRPARVLRGLRASGATISG*
Ga0066660_101847633	3300006800	Soil	MMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPLRVLRAVRAAGVTIGG*
Ga0079221_104183802	3300006804	Agricultural Soil	MTMMVYDMGRQYHAERVMSAGEQRRADEQAGRMAASAVQLWRRYLTRPARALRAVRMPGVTISG*
Ga0079221_111476402	3300006804	Agricultural Soil	ERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG*
Ga0079220_107484972	3300006806	Agricultural Soil	FRKREGVMTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARALRARRMPGVTISG*
Ga0075425_1009436422	3300006854	Populus Rhizosphere	MTMMMYDMGRQYHAERVMSADERRRADEQAGRMAAEASRLWQRYLARPARALRARRMPGVTISG*
Ga0075425_1031562082	3300006854	Populus Rhizosphere	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPAQALRALRMPGATISG*
Ga0075436_1006942492	3300006914	Populus Rhizosphere	MTMMVYDMGRQYHAERVMSAGDRRRADEQAGRMAAEASRLWQRYLTRPVRALRALRMPGATISG*
Ga0079219_102696702	3300006954	Agricultural Soil	MTMMMYDVGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARALRARRMPGVTISG*
Ga0079219_107965641	3300006954	Agricultural Soil	RPDRREREDVMTMMIYDMTMQHQAERRMSAAEQRRADEQLGRMAARTSKLWRRATRPARALRGLRASGVTIGG*
Ga0066710_1006853022	3300009012	Grasslands Soil	MMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWQRATRPVRVLRAVRAAGVTIG
Ga0066709_1021370432	3300009137	Grasslands Soil	MTMMMYDMSRQYHAERIMSAAEQRRADEQLGRMAARTSRLWQRATRPARVLRGLRASGATISG*
Ga0099792_105241691	3300009143	Vadose Zone Soil	MAMMFYDMTRQYQAERRMSAAEQRRVDEQLGRMAARTSRLWRRATHPTRALRGLRASGVTIGG*
Ga0105241_114213462	3300009174	Corn Rhizosphere	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRALRMPGATISG*
Ga0126318_102180883	3300010152	Soil	RQYHAERVMSAGERRRADEQAGRMAASAVQLWRRHLTRPARALRAVRMPGVTISG*
Ga0126376_103702522	3300010359	Tropical Forest Soil	MTMMVYDMGRQYHAERVMGAGERRRADEQAGKMAAAAAQLWQRYLTRPARALRALRVPGATIGG*
Ga0134128_123678302	3300010373	Terrestrial Soil	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAASAVQLWRRYLTRPARALRAVRMPGVTISG*
Ga0134126_103333472	3300010396	Terrestrial Soil	MTMMMYDMGRQYHAERIMSAGERRRADEQAGRMAAEASRLWQRYLSRPARALRALRMPGVTISG*
Ga0134126_113571461	3300010396	Terrestrial Soil	MMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRRWQRYLARPARALRGLRMPGVTISG*
Ga0126347_13500505	3300010867	Boreal Forest Soil	MTMMMYDMSRQYHAERIMTAAERRRADEQAGQLAAEVTRLRQRYLSRPIRALRALRMSGVTIGG*
Ga0126350_112724993	3300010880	Boreal Forest Soil	MTMMMYDMSRQYHAERIMTAAERRRADEQAGRMAAEASRLWQRYLTRPARVLRALRMTGATIGG*
Ga0137383_101633383	3300012199	Vadose Zone Soil	MMVYDMSRQYHAERVKSAAEQRRADEQLGRMAARTSELWRRATRPARALRGLRASGVTIGG*
Ga0137363_102409361	3300012202	Vadose Zone Soil	RREREDVMTMMIYDMTLQHQAERRMSAAEQRRVDEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIGG*
Ga0137399_114823842	3300012203	Vadose Zone Soil	MAMMFYDMTRQYQAERRMSAAEQRRADEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIGG*
Ga0137362_106265242	3300012205	Vadose Zone Soil	MAMMFYDMTRQYQAERRMSAAEQRRVDEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIGG*
Ga0137377_111756531	3300012211	Vadose Zone Soil	MTMMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWRRATRPARALRGLRASGVTITW*
Ga0137377_118650421	3300012211	Vadose Zone Soil	MAMMYYDMTRQYQAERRMSAAEQRRADEQLGRMAARTSGLWRRATRPARALRGLRASGVTIGG*
Ga0137370_102757303	3300012285	Vadose Zone Soil	YDMSRQYQAERIMSAAEQRRADDELGRMAARTSDLWRRATRPVRVLRAVRAAGVTIGG*
Ga0137398_103663232	3300012683	Vadose Zone Soil	MTMMMYDMSRQYHAERIMSAAEQRRADEHLGRMAVRTSELWRWATRPVRVLRGLPAAGVTIGG*
Ga0137404_105839043	3300012929	Vadose Zone Soil	MTMMVCDMGRQYQAERIMSAGERRRVDEQAGQLAATAAQVWQRYLTRPVQALRALWMPGA
Ga0137407_100873804	3300012930	Vadose Zone Soil	MTMMVCDMGRQYQAERIMSAGERRRVDEQAGQLAATAAQVWQRYLTRPVRALRALWP*
Ga0137407_111781821	3300012930	Vadose Zone Soil	MAMMFYDMTLQHQAERRMSTAEQRRADEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIGG*
Ga0187809_103203591	3300017937	Freshwater Sediment	MTMMMYDMGRQYHAERVMSAGERRRTDEQAGRMAAEASRLWRRYLTRPGRALRVLRVPGATIGG
Ga0187879_101416051	3300017946	Peatland	MMMCDMGRQYHAERIMTVAERRRADEQAGQLAAGVSRTWRRLRLGLTRPAQPLRAPRTSDVTISG
Ga0187883_107311582	3300018037	Peatland	AVPFVVQVTDSREEDVTTMMMCDMGRQYHAERIMTVAERRRADEQAGQLAAGVSRTWRRLRLGLTRPAQALRAPRTSDVTISG
Ga0187851_100326753	3300018046	Peatland	MMMCDMGRQYHAERIMTAAERRRADEQAGQLAAGVSRTWRRLRLGLTRPAQALRAPRTSDVTISG
Ga0066667_103049723	3300018433	Grasslands Soil	MMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIG
Ga0066669_108779092	3300018482	Grasslands Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAASAVQLWRRYLTRPARALRAVR
Ga0210399_100583213	3300020581	Soil	MMMYDMSRQYHAERIMSAAEQWRADEQLGRMAARTSELWRWATRPVRVLRGLPAAGVTIG
Ga0210399_107120292	3300020581	Soil	MFYDVSRQYHAERIQTPAERRRADEQAGMMAAEMSQLWQRLTRPARILRGLRARQARTTLYAR
Ga0210399_109185091	3300020581	Soil	MTMMMYDMSRQYHVERIVSAAEQRRADEQLGRMAAQTSRLWRRATRPARALRGLRASGVTITW
Ga0210399_113764792	3300020581	Soil	MMMYDMSRQYHAERIISAAEQRRADEQLGRMAARTSELWRRATGPVRVLRGLPAAGVTIG
Ga0210408_101222063	3300021178	Soil	MMMYDMSRQYHAERIVSAAEQRRADEQLGRMAAQTSRLWRRATRPARALRGLRASGVTIT
Ga0210388_105447343	3300021181	Soil	MTMMFYDMSRQYHAERIQTPAERRRADEQAGMMAAEMSQLWQRLTRPARILRGLR
Ga0213881_101206252	3300021374	Exposed Rock	MMIYDMSRQYHAERVLTVAEQRRADEQAGRMAAEVSRLWQRLTRPARALRLLILRARPAAYAR
Ga0210393_105539082	3300021401	Soil	MTMMFYDMSRQYHAERIQTPAERRRADEQVGMMAAEMSQLWQRLTRPAKILRGLRARQARTTLYAR
Ga0210385_105862231	3300021402	Soil	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWRRATRPAWALRGLRASGVTIT
Ga0210397_101398672	3300021403	Soil	MMFYDVSRQYYAERIQTPAERRRADEQAGMMAAEMSQLWQRLTRPARILRGLRARQARTTLYAR
Ga0210394_112787751	3300021420	Soil	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWWRATRPARALRGLRASGVTIT
Ga0210384_102953781	3300021432	Soil	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWRRATRPARALRGLRASGVTIT
Ga0210384_109785393	3300021432	Soil	MTMMFYDMSRQYHAERIQTPAERRRADEQAGMMAAEMSQLWQRLTRPARILRGLRARQARTTLYAR
Ga0210410_100661342	3300021479	Soil	MMFYDVSRQYHAERIQTPAERRRADEQAGMMAAEMSQLWQRLTRPARILRGLRARQARTTLYAR
Ga0126371_103250052	3300021560	Tropical Forest Soil	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAASAVQVWQRYLTRPARALRALRMPGVTISG
Ga0224712_102093563	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRARRVPGVTIGG
Ga0207684_101903362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMMYDMSRQYHAERIMSAAEQRRADEQLGRMAAQTSRLWRRATRPARVLRGLRASGVTIT
Ga0207652_113871311	3300025921	Corn Rhizosphere	DMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG
Ga0207646_105159882	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMFYDMTRQYQAERRMSAAEQRRVDEQLGRMAARTSRLWQRATRTTRALRGLRASGVTIG
Ga0207664_100850774	3300025929	Agricultural Soil	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARARRARRMPGVTISG
Ga0207664_103174292	3300025929	Agricultural Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGQLAASAAQFWQRYFTRPAWALRARRVPGVTIGG
Ga0207664_104294402	3300025929	Agricultural Soil	MMVYDMGRQYHAERVMSAGERRRADAQAGQLAASAAQAWRRAQAWPRYLTGPVRALRSLRLPGATISG
Ga0207664_114075282	3300025929	Agricultural Soil	MTMMIYDMGRQYHAERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRVPGATISG
Ga0207664_115466291	3300025929	Agricultural Soil	RPDRREREDVMTMMMYDMSRQYHAERIMSAAEQRRADEHLGRMAARTSDVWRRATRPVRVLRGLRASGATIGG
Ga0207644_113901212	3300025931	Switchgrass Rhizosphere	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRALRMPGATISG
Ga0207661_101190803	3300025944	Corn Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARTLLGLRMPGVTISG
Ga0207679_103335422	3300025945	Corn Rhizosphere	MTMMMYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRRWQRYLARPARALRGLRMPGVTISG
Ga0209808_12110452	3300026523	Soil	MSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG
Ga0209577_106050192	3300026552	Soil	EDVMTMMMYDMSRQYHAERIMSAAERRRADDELGRMAARTSELWRRATRPVRVLRAVRAAGVTIGG
Ga0179587_103308372	3300026557	Vadose Zone Soil	MMFYDMTRQYQAERRMSAAEQRRADEQLGRMAARTSRLWRRATRPTRALRGLRASGVTIG
Ga0209178_10317314	3300027725	Agricultural Soil	MTMMMYDMGRQYHTERVMSAGERRRADEQAGRMAAEVSRVWQRYLTRPARALRALRMPGVTISG
Ga0209178_10928272	3300027725	Agricultural Soil	MTMMVYDMGRQYHAERVMSAGEQRRADEQAGRMAASAVQLWRRYLTRPARALRAVRMPGVTISG
Ga0209177_102113462	3300027775	Agricultural Soil	MTMMMYDVGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLARPARALRARRMPGVTISG
Ga0209275_108450731	3300027884	Soil	MMMYDMSRQYHAERIMSAAERRRADEQLGRMAARTSELWRWATRPVRVLRGWPAAGVTIG
Ga0307504_101137101	3300028792	Soil	MMMYDMSRQYHAERIMSAAEQRRADEHLGRMAVRTSELWRWATRPVRVLRGLPAAGVTIG
Ga0307310_105751631	3300028824	Soil	DDRPDGRGRKDVMTMMIYDMTLQHQAERRMSAAEQRRADEQLGRMAARTSRLWRRATRPTRALRGLGVSGATIGG
Ga0222749_105484092	3300029636	Soil	MIMYEMSRQYHAERIMSAAEQRRADARLRRMAAQTSRLWRRATRPAWALRGLRASGVTIT
Ga0308174_108388382	3300031939	Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLRQRYLTRPARALRALRMPGATI
Ga0308176_104136813	3300031996	Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLRQRYLTRPARALRALRMPGATISG
Ga0308173_119636512	3300032074	Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGQLAAEASRLWQRYLTRPARALRARRVPGVTIGG
Ga0335085_109922473	3300032770	Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRAPRMPGATISG
Ga0335074_108020242	3300032895	Soil	MMMYDMGRQYHAERTMSAAEQRRADEQAGRLAAEASRVWRRLRVGLIRPAKALRALWMPGVTIGG
Ga0335083_113131392	3300032954	Soil	MTMMVYDMGRQYHAERVMSAGERRRADEQAGRMAAEASRLWQRYLTRPARALRALRMPG
Ga0335073_108615671	3300033134	Soil	MMMYDMGRQYHAERTMSAAEQRRADERAGRMAAQASRGWRRLRLGLSRPVRALRALWMPGVTIGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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