NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076362

Metagenome / Metatranscriptome Family F076362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076362
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 57 residues
Representative Sequence MAQASGTRTEPKHAPGGRRRRRGLELAGLVLGIVAGVGIALGWLISTRGQPPRPVVY
Number of Associated Samples 109
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(32.203 % of family members)
Environment Ontology (ENVO) Unclassified
(29.661 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.373 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 34.12%    β-sheet: 0.00%    Coil/Unstructured: 65.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF13489Methyltransf_23 37.29
PF08241Methyltransf_11 30.51
PF00534Glycos_transf_1 5.93
PF13439Glyco_transf_4 1.69
PF05653Mg_trans_NIPA 0.85



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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil32.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.39%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.39%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.54%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.54%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.69%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.69%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.85%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012494Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610Host-AssociatedOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027161Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062387_10071313723300004091Bog Forest SoilMAQLSGSRTQPSHAPARRRRGLEIGGLVIGVVAGLGITLGWL
Ga0066812_102673423300005105SoilMAQASGTRTGSRHAPPGRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQP
Ga0066815_1001936013300005164SoilMAQASGTRTGPRHTPPARRRRRGLEVGGLVIGILAGLGVTLGWLISTRGQP
Ga0066677_1056928923300005171SoilMAQASGTRTEPENVPARPRRRRWLEVGGLVIGIVAGVGIALGW
Ga0070667_10236320123300005367Switchgrass RhizosphereMAQASDTRTEPKHGPAHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQ
Ga0070711_10066779113300005439Corn, Switchgrass And Miscanthus RhizosphereMAQASGTRTEPKHAPDRPRRRRWLEVGGLVIGIVAGVGIALGWIIST
Ga0066687_1053484113300005454SoilMAQASGTRTEPEHTPARPRRRRWLEVGGLVIGIVAGVGIALGWIISTRGQPS
Ga0070698_10070743013300005471Corn, Switchgrass And Miscanthus RhizosphereMAQASDTRTQPKHTPGHPRRRRWLEVGGLAFGILAGVGIALGWIISTRGQPPRPV
Ga0070699_10099306513300005518Corn, Switchgrass And Miscanthus RhizosphereMAQVSGTRTEANPGPAPRRRRRGREIAGLAVGIVVGLSIALGW
Ga0066695_1055323413300005553SoilMAQASGTRTQPKHTPTRRRRRGLEVIGLVVGIVAGLGIALGW
Ga0066706_1138940323300005598SoilMAQASGTRTEPKHVPARPRRRRWLEVGGLVIGIVAGV
Ga0070762_1075247513300005602SoilMAQASGTRTEPKHVPSRPRRRRWLEVGGLVIGIVAGVGIALGWIISTRGQPPRPVVYSTQPPVVVHGTPAAPSLSGKPD
Ga0070763_1027597623300005610SoilMAQASGTRTEPKHVPSRPRRRRWLEVGGLVIGIVAGVGIALGWMISTRGQPPHPVVYSTHPP
Ga0066903_10433013313300005764Tropical Forest SoilMARASGTRTEPNHAPARHRRRRRRVLEAAGLVIGIVAGVGIALGWLISTRGQPPRPVVYS
Ga0066651_1040229813300006031SoilMAQASGTRTGPRQTPPPRRRRRGREVGGLVIGILAGLGIV
Ga0075014_10100318423300006174WatershedsMAQLSGSRTQPSHAPARRRRGLELGGLVIGIVAGLSIA
Ga0074064_1000983423300006603SoilMAQASGTRTGSRHAPPGRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPSPPV
Ga0079222_1124193913300006755Agricultural SoilMAQASGTKTGSRHDPPVRRRRRGLEVGGLVIGILAGLGIT
Ga0066660_1014197713300006800SoilMAQASGTRTEPKHPPARPRRRRWLEVGGLVIGIVAGVGIALGWIISTRGQPSRPVVYSTHPPVEVHGSPAAPGLS
Ga0079219_1016074913300006954Agricultural SoilMAQASGTKTGPRHTPPVRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPRPVVFST
Ga0075423_1256044423300009162Populus RhizosphereMAQASGTKTGPRHTPPVRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPRPVVFSTH
Ga0116216_1077744123300009698Peatlands SoilMAQVSGTRTEANNAPARRRPRRGLELGGLVIGIVAGLSIALGWLISTRG
Ga0116217_1101247423300009700Peatlands SoilMIPSMAQVPGTRIEANNSPARRRPRRGLELAGLVIGIVAGLSIAL
Ga0126380_1104279623300010043Tropical Forest SoilMAQASGTRTEPNQAPARRRRRRGLEVAGLVIGIIAGVGIVLGWLVSTRGQPPRPVVYST
Ga0126382_1157042723300010047Tropical Forest SoilMAQASGTTTQPKHAPDRPRRRRGREVLGLVIGIVAGVGIAAGWLISTRAQPPRPVVYSTHPPVQVHGAAAAPALSG
Ga0126373_1292818423300010048Tropical Forest SoilMIPMASDTRTEPKRAPAPRRRRRGLEAVGLVIGIVAGVGIVLGWLVSTRGQPPRPVVYSSHPPVLVPGAAGPAARPDPAAL
Ga0126318_1117694533300010152SoilMAQASGTKTGPRRTPPVRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPRPVVYS
Ga0127503_1057424213300010154SoilMAQASGTKTEPKHAPAPRRHRRALEAAGLVIGIVAGVGIALGWLVSTRSQPPRPVVYSTHPPVLVHGASG
Ga0127503_1129480123300010154SoilMAQASDTRTEPEHGPSRPRRRRWLEVGGLVIGIVAGVGIALGWIISTRGQPPRPVVYS
Ga0126376_1020365433300010359Tropical Forest SoilMAQASGTTTQPKHAPDRPRRRRGREVLGLVIGIVAGVGIAAGWLISTRSQPPRPVVYSTHPPVQVHGAAAAPALSGEPDPVA
Ga0134126_1159523923300010396Terrestrial SoilMAQASGTKTGPRHTPPVRRRRRGLEVGGLVIGILAGVGITLGWLISTRGQPPRPVVFSTQPPVQVNGAPAA*
Ga0150983_1228424923300011120Forest SoilMAQASGTRTEPKHAPRRRRRGLELAGLVLGIVAGVGIALGWLISTRGQPPRPVVYSSHPPVLVHGASGVPGASAEPDPA
Ga0137391_1005655653300011270Vadose Zone SoilMVQASGTRTEANPDPARRRRRRGREIAGLAIGIAAGLSIALGWAIST
Ga0137389_1182960713300012096Vadose Zone SoilMAQVPATRTEANPAPAPRRRKRRRGREIAGLAVGILAGLSIALGWVISTRGHASAPVV
Ga0137388_1003389653300012189Vadose Zone SoilMIPPMAQVSGTRTEADNAPARRRPRRGLELVGLVIGIVAGLSIALGWLISTRGHPS
Ga0137364_1107337823300012198Vadose Zone SoilMAQASGTTTGPRHAPPARRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPHPVVYSTHPPVLVHGASGASAEPDPAALNA
Ga0137362_1146130413300012205Vadose Zone SoilMAQASGTRTEANPDPAPRRRWRGREIAGLTIGIAAGLSIALGCAISTRGHAPATVV
Ga0137387_1053714413300012349Vadose Zone SoilMAQASGTRTEANPDPAPRRRRRGREIAGLAIGIAVGLSIALGWAISTRGHAPTPVVYSTHPP
Ga0157341_103578813300012494Arabidopsis RhizosphereMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRPVVYSTQPPVVVHGTPAAPGLSGEPD
Ga0157313_106308123300012503Arabidopsis RhizosphereMAQASGTKTGSRHDPPVRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPRPVVYSSQPPVVVHG
Ga0157330_103248513300012514SoilMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRP
Ga0157288_1032543423300012901SoilMAQASDTRTQLKHAPGRPRRRRWLEVGGLAFGILAGVGIALGWIISTRGQPPRPVVYSTQPPVVVHG
Ga0182034_1160370423300016371SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSAPVVYSSHPPVLVPGAAGPS
Ga0182040_1079509323300016387SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLVIGIVAGLGIALGWLISTRGHPAAPVVYSSRPPVLVHGAPG
Ga0182039_1181884613300016422SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGW
Ga0182039_1210968513300016422SoilMAQASGTRTEPHHGPAPRRRRRRRGLEVVGLVVGIVAGVAIALGWMISTRGQPPRPVVYSSHPPVL
Ga0187809_1042384513300017937Freshwater SedimentMAQASGTKTGSRHAPPVRRRRRGLEVGGLVIGILAGLGITLGWLISTRGQPPRPVV
Ga0187779_1034452723300017959Tropical PeatlandMIPPMAQVSGTETEPEHAPARRRRRRGLEFGGLVIGIAAGLSIALGWLLSTQGHPSAPVVFST
Ga0187779_1102812523300017959Tropical PeatlandMIPAMAQVSGTRTEPSHAPARRRPRRGLELAGLVIGIVAGLGIALGW
Ga0187777_1030973613300017974Tropical PeatlandMIPPMAQVSGTETEPEHAPARRRRRRGLEFGGLVIGIAAGLSIALGWLLSTQGHPSAPVVFSTHPPVLVHGPPGSPGSPGSPG
Ga0187782_1148910613300017975Tropical PeatlandMTPAMAKVSGARTEADRAPARRRPRRGLELAGLAIGIAAGLG
Ga0187874_1037909723300018019PeatlandMAQVPGTRTEANSSPAGRRPRRGLELGGLVIGIVAGLSIALGWLISPRGHPSGPVVTSTHRPVLVGGSSGSSAE
Ga0187883_1049370423300018037PeatlandMAQVPGTRTEANSSPAGRRPRRGLELGGLVIGIVAGLSIALGWLISPRGHPSGPVVTSTHRPVLVGGSSGSSAEP
Ga0210407_1109044713300020579SoilMAQASGTRTQPNDAPAPRRRRRGLEAVGLIIGIAAGMGITLGWLISTRGQPPRPVVY
Ga0210395_1013016233300020582SoilMAQASGTRTEPENVPARPRRRRWLEVGGLVIGIVAGVGIALGWIISTRGQPPHPVVY
Ga0210404_1029577613300021088SoilMAQLSGSRTQPSHAPARRRRGLEIGGLVIGIVAGLGITIGWLISTPSHP
Ga0210404_1031643223300021088SoilMAQASGTRTEPENVPARPRRRRWLEVGGLVIGIVAGVGIAL
Ga0210385_1097547013300021402SoilMAQASGTKTGSRHTPPVRRRRRGLEVGGLVIGILAGLGITLGWLFSTRGQ
Ga0210391_1023711133300021433SoilMAQLSGSRTRPSHAPARRRRGLEIGGLVIGIVAGLGITIGWLISTPSHPRPVVYSTHPPAVVR
Ga0242675_108218623300022718SoilMAQASGTRTEPENVPARPRRRRWLEVGGLVIGIVAGVGIALGWMISTRGQPPR
Ga0242665_1020596023300022724SoilMAQASGTRTEPKHAPGGRRRRRGLELAGLVLGIVAGVGIALGWLISTRGQPPRPVVY
Ga0247666_105434323300024323SoilMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRPVVYSTQPPVVVHGTPAAPGLSG
Ga0207656_1049143023300025321Corn RhizosphereMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILAGVGI
Ga0207692_1059476923300025898Corn, Switchgrass And Miscanthus RhizosphereMAQASGTRTQPKHAPARRRRRRGLEVGGLVIGIVAGLGIALGWLIST
Ga0207685_1013258213300025905Corn, Switchgrass And Miscanthus RhizosphereMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILAGVGIALGWILST
Ga0207693_1051017313300025915Corn, Switchgrass And Miscanthus RhizosphereMAQASGTRTEPENVPARPRRRRWLEVGGLVIGIVAGVGIALGWMISTRGQPPRPVVYSTHPPVVVRGASGTAAEP
Ga0207646_1011411233300025922Corn, Switchgrass And Miscanthus RhizosphereMAQVSGTRTEANPGPAPRRRRRGREIAGLAVGIVVGLSIALGWVISTRGHSSAPVVYSTH
Ga0207659_1064998913300025926Miscanthus RhizosphereMAQASDTRTEPKHAPGHPRRRRWLEVGGLAFGILA
Ga0207664_1165024623300025929Agricultural SoilMAQASGTRTEPKHAPDRPRRRRWLEVGGLVIGIVAGVGIALGWI
Ga0207701_1043937833300025930Corn, Switchgrass And Miscanthus RhizosphereMAQASDTRTEPKHGPAHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRPVVYSTQPP
Ga0207706_1035239633300025933Corn RhizosphereMAQASDTRTEPKHAPGHPRRRRWLEVRGLAFGILAGAGT
Ga0207704_1197311413300025938Miscanthus RhizosphereMAQASDTRTQPKHAPARPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRPVVYS
Ga0208368_10436723300027161Forest SoilMAQASGTRTEQKHAPARRRRRRGLELAGLVLGIVAGVGIALGWLISTRGQPPRPVV
Ga0209178_141978923300027725Agricultural SoilMAQASDTRTEPKHGPAHPRRRRWLEVGGLAFGILAGVGIALGWILSTRGQPPRPVVYSTQPPVVVH
Ga0209073_1045238323300027765Agricultural SoilMAQASGTRTQPNDAPAPRRRRRGLEAVGLIIGIAAGVGITLGWLISTRGQPPRPVVYSTHPPVVVHGG
Ga0307312_1019170313300028828SoilMAQASGTRTGPRPTPPARRRRRGREIGGLVIGILAGLGIVVGWLITTRGHPSHPVVYST
Ga0170824_12327483723300031231Forest SoilMAQASDTRTEPEHGPSRPRRRRWLEVGGLVIGIVAGVGIALGWI
Ga0302325_10019927143300031234PalsaMAQVSGTRPGKDEAPARGRRRRGLELAGLVFGILAGLGIALAW
Ga0170820_1047654613300031446Forest SoilMAQASGTKTEPKRAPAPRRRRRALEAAGLVIGIVAGVAIALGWLISTRGQTPRPV
Ga0318516_1054823923300031543SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLIIGIVAGLGIALGWLISTRGHPSAPVVYSSRPPVLVHGA
Ga0318516_1064084613300031543SoilMTPRMAQASSTKPKPDHAPARRRRRRGLEAVGLAIGIIAGVGIVLGWVISTRGQPPRPVVYSSQPPVVVHGASGT
Ga0318515_1068353113300031572SoilMAQASGTRTGPRHSPPDRRPGRRRGLEVAGLVIGIVAGLGI
Ga0310915_1103174513300031573SoilMAQASGTRTGPRHSPPDRRPGRRRGLEVAGLVIGIVAGLGIALGWLISTRGHPSAPVVYSSRPPVLVHGAPGP
Ga0318555_1047158723300031640SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLIIGIVAGLGIALGWLISTRGHPSAPVVYSSRPPVLVHGAPGP
Ga0318542_1068459323300031668SoilMIPPMAQVSDTRTEADDATAPRRPRRRLELVGLAVGIVAGVGIALAW
Ga0318542_1074908923300031668SoilMAQASGTKTGPRQSPPPRRRRRGLELGGLAIGIVAG
Ga0318572_1084020813300031681SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAVGLVIGIVAGLGIALGWLISTRGHPSAPVVYSSRPPVLVHGA
Ga0318560_1017042933300031682SoilMASDTRTEPKRAPAPRRRRRGLEVAGLVIGIVAGVGIVLGWLVSTRGQPPRPVVYSTHPPVAVRGAS
Ga0318496_1069359523300031713SoilMAQASGTKTGPRQSPPPRRRRRGLELGGLAIGIVAGLSIALGWLISTRGHPSAPVVYSSHPPVLVPGAAGPSAGLD
Ga0318501_1029222913300031736SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSA
Ga0318492_1011988733300031748SoilMASDTRTEPKRAPAPRRRRRGLEVAGLVIGIVTGVGIVLG
Ga0318492_1059051113300031748SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLIIGIVAGLGIALGWLISTRGHPSAPVVY
Ga0318494_1039363813300031751SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGH
Ga0318526_1033807513300031769SoilMAQASGTRTQPNHAAAPRRRRRGRGLEAAGLIIGIV
Ga0318521_1054648823300031770SoilMIPPMAQVSDTRTEADDATAPRRPRRRLELVGLAVGIVAGVGIALAWLLPARGHPPGPVALSTHA
Ga0318566_1040059023300031779SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSAPVVYSSHPPVLVPGA
Ga0318576_1047777723300031796SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLIIGIVAGLGI
Ga0318497_1003021233300031805SoilMAQASGTRTGPRHSPPDRRPGRRRGLEAAGLIIGIVAGLGIALGWLISTRGHPSAPVVYSSRPP
Ga0307473_1082158323300031820Hardwood Forest SoilMAQASGTKTQPKHSPARRRRRRGLEIAGLLLGIVAGVGIALGWLISTRGQPPRPVVYSSHPPVLVHGASG
Ga0310917_1056095523300031833SoilMASDTRTEPKRAPAPRRRRRGLEVAGLVIGIVAGVGIVLGWLVSTRGQPPR
Ga0318522_1014619813300031894SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLI
Ga0318520_1091050823300031897SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSAPVVYSSHPPVLVPGAAGRR
Ga0310909_1055911913300031947SoilMASDTRTEPKRAPAPRRRRRGLEVAGLVIGIVAGVGIVLGWLVSTRGQPPRPVVHSSQPPVLVHGAPGPSAEPDPAALDA
Ga0318558_1067274023300032044SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLS
Ga0318575_1072280923300032055SoilMASDTRTEPKRAPAPRRRRRGLEVAGLVIGIVAGVGIVLGWLVSTRG
Ga0318513_1001395613300032065SoilMIPPMAQVSDTRTEADDATAPRRPRRRLELVGLAVGIVAGVGIALAWLLPARGHPP
Ga0318524_1001677853300032067SoilMAQASGTRTEANPDPAPRRRRRGREIAGLAVGIVAGLSIALGWVISTRGHAPAPVVYSTHPPVL
Ga0318553_1009142813300032068SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSAPVVYS
Ga0318525_1000175363300032089SoilMAQASGTRTEANPDPAPRRRRRGREIAGLAVGIVAGLSIALGWVISTRGHAPAPVVYS
Ga0307470_1124649313300032174Hardwood Forest SoilMAQASDTRTQPKHAPGRPRRRRWLEVGGLAFGILAGVGIALGWIISTRGQPPRPVVYSTQPPVVVHG
Ga0306920_10183895023300032261SoilMAQASGTKTGPRQSPPPRRRRRGLELGGVAIGIVAGLSIA
Ga0306920_10333386113300032261SoilMIPPMAQLSGTRTQPDRPPVRRRRRRGLEVGGLVIGIVAGLSIALGWMLGTRGQPSRPVVYSTHPPVL
Ga0315742_1323159613300032756Forest SoilMAQLSGSRTQPSHAPARRRRGLELGGLVIGIVAGLSIALGWLISTPGHPRPVVYST
Ga0335085_1061517313300032770SoilMAQASGTRTDPKGTPARPRRRRWREVVGLVVGIVAGVGIASGWLIS
Ga0335079_1040041513300032783SoilMAQASGTKTGPRQSPPPSRRRRGLELGGVAIGIVAGLSIALGWLISTRGHPSAPVVYSSHPPV
Ga0335078_1202818123300032805SoilMIPRMAQASSTKPKPNHAPARRRRRRGLEAVGLVVGIIAGVGIVLGWVISTRGQPPRPVVYSSQPPV
Ga0335078_1245513513300032805SoilMAQASGTRTQPNRAPAPRRRRRGLEVVGLIIGIAAGVGITLGWLVSTRGQPPRPVVYS
Ga0335076_1037750633300032955SoilMIPRMAQASSTKPKPNHAPARRRRRRGLEAVGLVVGIIAGVGIVLGWVISTRGQPPHPVVYSSQPPVVVH


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