NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076390

Metagenome / Metatranscriptome Family F076390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076390
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 51 residues
Representative Sequence MIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Number of Associated Samples 101
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 70.34 %
% of genes near scaffold ends (potentially truncated) 25.42 %
% of genes from short scaffolds (< 2000 bps) 87.29 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.051 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.407 % of family members)
Environment Ontology (ENVO) Unclassified
(27.119 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.695 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.43%    β-sheet: 0.00%    Coil/Unstructured: 45.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF02600DsbB 59.32
PF09084NMT1 4.24
PF00496SBP_bac_5 4.24
PF12680SnoaL_2 3.39
PF00962A_deaminase 1.69
PF00768Peptidase_S11 1.69
PF03808Glyco_tran_WecG 0.85
PF031712OG-FeII_Oxy 0.85
PF00005ABC_tran 0.85
PF13202EF-hand_5 0.85
PF01909NTP_transf_2 0.85
PF04138GtrA 0.85
PF14534DUF4440 0.85
PF00656Peptidase_C14 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG1495Disulfide bond formation protein DsbBPosttranslational modification, protein turnover, chaperones [O] 59.32
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.24
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.24
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.69
COG1816Adenosine/6-amino-6-deoxyfutalosine deaminaseNucleotide transport and metabolism [F] 1.69
COG1922UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF familyCell wall/membrane/envelope biogenesis [M] 0.85
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.05 %
UnclassifiedrootN/A16.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559005|cont_contig42096All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum941Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1037779All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300001546|JGI12659J15293_10084206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum696Open in IMG/M
3300002245|JGIcombinedJ26739_100085013All Organisms → cellular organisms → Bacteria → Proteobacteria2944Open in IMG/M
3300004005|Ga0055448_10264357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum678Open in IMG/M
3300004052|Ga0055490_10254745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum542Open in IMG/M
3300004058|Ga0055498_10003783All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300004082|Ga0062384_100265773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1048Open in IMG/M
3300004145|Ga0055489_10155407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales694Open in IMG/M
3300004152|Ga0062386_100082338All Organisms → cellular organisms → Bacteria2457Open in IMG/M
3300004152|Ga0062386_100097073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum2261Open in IMG/M
3300004152|Ga0062386_100370203All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300005332|Ga0066388_100079711All Organisms → cellular organisms → Bacteria → Proteobacteria3638Open in IMG/M
3300005332|Ga0066388_100186904All Organisms → cellular organisms → Bacteria2685Open in IMG/M
3300005332|Ga0066388_101473757All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300005332|Ga0066388_102737553All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300005332|Ga0066388_105881581All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383620Open in IMG/M
3300005332|Ga0066388_108419408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum514Open in IMG/M
3300005363|Ga0008090_14405561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum590Open in IMG/M
3300005434|Ga0070709_11550965Not Available539Open in IMG/M
3300005436|Ga0070713_100230859All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300005437|Ga0070710_10762056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum688Open in IMG/M
3300005602|Ga0070762_10014951All Organisms → cellular organisms → Bacteria3965Open in IMG/M
3300005713|Ga0066905_100594411All Organisms → cellular organisms → Bacteria → Proteobacteria936Open in IMG/M
3300005764|Ga0066903_100286181All Organisms → cellular organisms → Bacteria → Proteobacteria2590Open in IMG/M
3300005764|Ga0066903_100973581All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300005764|Ga0066903_102556825All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300005764|Ga0066903_103441176All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005764|Ga0066903_107001473All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum585Open in IMG/M
3300005993|Ga0080027_10326957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum612Open in IMG/M
3300006028|Ga0070717_10716787All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300006092|Ga0082021_1118559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1133Open in IMG/M
3300006173|Ga0070716_101679392Not Available523Open in IMG/M
3300006178|Ga0075367_10972257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum542Open in IMG/M
3300006578|Ga0074059_12149487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum993Open in IMG/M
3300006904|Ga0075424_101494227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum717Open in IMG/M
3300010043|Ga0126380_10860099All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383749Open in IMG/M
3300010046|Ga0126384_11102570All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300010339|Ga0074046_10010804Not Available6798Open in IMG/M
3300010343|Ga0074044_10067350All Organisms → cellular organisms → Bacteria → Proteobacteria2427Open in IMG/M
3300010358|Ga0126370_11065978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383742Open in IMG/M
3300014308|Ga0075354_1003218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum2015Open in IMG/M
3300014317|Ga0075343_1199695Not Available521Open in IMG/M
3300014489|Ga0182018_10699615All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300014501|Ga0182024_10864811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1094Open in IMG/M
3300014881|Ga0180094_1164266All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium CAVE-383520Open in IMG/M
3300014969|Ga0157376_12236751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum586Open in IMG/M
3300015206|Ga0167644_1081648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1022Open in IMG/M
3300016270|Ga0182036_10250266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1326Open in IMG/M
3300016294|Ga0182041_12065604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum531Open in IMG/M
3300017939|Ga0187775_10530380Not Available505Open in IMG/M
3300017966|Ga0187776_10612964All Organisms → cellular organisms → Bacteria → Proteobacteria760Open in IMG/M
3300018058|Ga0187766_10156670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1417Open in IMG/M
3300018058|Ga0187766_11232060Not Available543Open in IMG/M
3300018064|Ga0187773_10711412All Organisms → cellular organisms → Bacteria → Proteobacteria628Open in IMG/M
3300018086|Ga0187769_10148152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1717Open in IMG/M
3300019885|Ga0193747_1080005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria803Open in IMG/M
3300020579|Ga0210407_10578461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum876Open in IMG/M
3300020582|Ga0210395_10225142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1408Open in IMG/M
3300021168|Ga0210406_10731866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum759Open in IMG/M
3300021361|Ga0213872_10468094Not Available505Open in IMG/M
3300021374|Ga0213881_10513205Not Available544Open in IMG/M
3300021377|Ga0213874_10390659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum540Open in IMG/M
3300021384|Ga0213876_10246386All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300021388|Ga0213875_10294428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum767Open in IMG/M
3300021420|Ga0210394_11180617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum658Open in IMG/M
3300021475|Ga0210392_11420446Not Available519Open in IMG/M
3300021478|Ga0210402_10182044All Organisms → cellular organisms → Bacteria → Proteobacteria1926Open in IMG/M
3300021478|Ga0210402_11540373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria592Open in IMG/M
3300021560|Ga0126371_10590654All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300024271|Ga0224564_1127927All Organisms → cellular organisms → Bacteria → Proteobacteria522Open in IMG/M
3300025898|Ga0207692_10960171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum563Open in IMG/M
3300025900|Ga0207710_10223025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales936Open in IMG/M
3300025905|Ga0207685_10256183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum848Open in IMG/M
3300025939|Ga0207665_11032981Not Available654Open in IMG/M
3300025955|Ga0210071_1047728Not Available546Open in IMG/M
3300025971|Ga0210102_1127837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum546Open in IMG/M
3300025985|Ga0210117_1000778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum3045Open in IMG/M
3300027812|Ga0209656_10155282All Organisms → cellular organisms → Bacteria → Proteobacteria1143Open in IMG/M
3300027895|Ga0209624_10194013All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1348Open in IMG/M
3300027908|Ga0209006_10913271Not Available704Open in IMG/M
3300028768|Ga0307280_10263090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum623Open in IMG/M
3300028784|Ga0307282_10225939All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum897Open in IMG/M
3300028884|Ga0307308_10117467All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300030007|Ga0311338_10652094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1073Open in IMG/M
3300030760|Ga0265762_1045237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum871Open in IMG/M
3300031028|Ga0302180_10642073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum508Open in IMG/M
3300031236|Ga0302324_102475883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum634Open in IMG/M
3300031274|Ga0307442_1011774All Organisms → cellular organisms → Bacteria → Proteobacteria3482Open in IMG/M
3300031274|Ga0307442_1051675All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300031364|Ga0307445_10108211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1040Open in IMG/M
3300031364|Ga0307445_10251641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum608Open in IMG/M
3300031511|Ga0307424_1045389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1509Open in IMG/M
3300031537|Ga0307419_10034646All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300031573|Ga0310915_10180684All Organisms → cellular organisms → Bacteria → Proteobacteria1470Open in IMG/M
3300031708|Ga0310686_109744452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1406Open in IMG/M
3300031708|Ga0310686_116563191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1112Open in IMG/M
3300031781|Ga0318547_10830397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum576Open in IMG/M
3300031797|Ga0318550_10588230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum535Open in IMG/M
3300031798|Ga0318523_10395422Not Available687Open in IMG/M
3300031835|Ga0318517_10413978Not Available609Open in IMG/M
3300031879|Ga0306919_10432494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1012Open in IMG/M
3300031910|Ga0306923_11016001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum900Open in IMG/M
3300032001|Ga0306922_10508850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1283Open in IMG/M
3300032042|Ga0318545_10299423Not Available578Open in IMG/M
3300032055|Ga0318575_10563676Not Available578Open in IMG/M
3300032066|Ga0318514_10324906Not Available814Open in IMG/M
3300032089|Ga0318525_10451052Not Available659Open in IMG/M
3300032160|Ga0311301_10826363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum1266Open in IMG/M
3300032261|Ga0306920_100481543All Organisms → cellular organisms → Bacteria1843Open in IMG/M
3300032261|Ga0306920_103576030Not Available573Open in IMG/M
3300032756|Ga0315742_12354316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum604Open in IMG/M
3300032893|Ga0335069_11242178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales814Open in IMG/M
3300032897|Ga0335071_10106814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2744Open in IMG/M
3300033290|Ga0318519_10558476Not Available693Open in IMG/M
3300034090|Ga0326723_0290508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → Acidisoma cellulosilyticum733Open in IMG/M
3300034147|Ga0364925_0003222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4587Open in IMG/M
3300034148|Ga0364927_0018247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1631Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil10.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.93%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.08%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.08%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.39%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.39%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.54%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots2.54%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.69%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.69%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.69%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.69%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.85%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.85%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.85%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.85%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.85%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.85%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Wastewater Treatment PlantEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant0.85%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.85%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004005Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006092Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, SingaporeEngineeredOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014317Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015206Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021361Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2Host-AssociatedOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025955Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025985Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031274Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30EnvironmentalOpen in IMG/M
3300031364Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30EnvironmentalOpen in IMG/M
3300031511Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20EnvironmentalOpen in IMG/M
3300031537Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0096.000029702166559005SimulatedMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
AP72_2010_repI_A100DRAFT_103777933300000837Forest SoilMIYAIFMLLVLAVLVASWRGSTLELPLFVVTVAWVLVHLVLDMTAPL
JGI12659J15293_1008420623300001546Forest SoilMIYAVFMTLVLLTLLASWRGHGLELTLFCITVVSVLAHLIADMTSPLTLSF*
JGIcombinedJ26739_10008501323300002245Forest SoilMVYAVFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0055448_1026435723300004005Natural And Restored WetlandsMVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF*
Ga0055490_1025474513300004052Natural And Restored WetlandsMVYAIFMLLTLMTLAANWLRHPLQLPLFVVAVVWMAAYLVLDMTTPLTLSF*
Ga0055498_1000378323300004058Natural And Restored WetlandsMVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF*
Ga0062384_10026577323300004082Bog Forest SoilMIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTNPLTLSF*
Ga0055489_1015540723300004145Natural And Restored WetlandsMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLALDMTTPLTLSF*
Ga0062386_10008233823300004152Bog Forest SoilVIYAIFMLLVLLTLFAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF*
Ga0062386_10009707333300004152Bog Forest SoilMIYAIFMLLTLTALAANWLRHPLQLPLFIVAVVWMAVYLALDMTTPLTLSF*
Ga0062386_10037020343300004152Bog Forest SoilMVYAIFMLLLLLALVASWRGHVLELPLYLITVVWVLAHLIGEMTTPLALSL*
Ga0066388_10007971143300005332Tropical Forest SoilVVYAIFMLLVLLTLAASWRGYALGLLLFLITVAWVLVHLVLDMTDPLTLSF*
Ga0066388_10018690443300005332Tropical Forest SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0066388_10147375723300005332Tropical Forest SoilMVYAIFMLLVLLTLAAAWRRHALELPLFLVTLAWVLAHLIADMTNPLTLSF*
Ga0066388_10273755323300005332Tropical Forest SoilMIYAIFMLLVLAILGAAWRRSALALPLFVFTAAWVLVHLIGDITTPLTLSF*
Ga0066388_10588158113300005332Tropical Forest SoilMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0066388_10841940823300005332Tropical Forest SoilTMIYAIFMLLVLLTLIAAWRRHALELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0008090_1440556123300005363Tropical Rainforest SoilVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0070709_1155096523300005434Corn, Switchgrass And Miscanthus RhizosphereMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0070713_10023085923300005436Corn, Switchgrass And Miscanthus RhizosphereMIYAIFMLLVLLTLVAAWCRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF*
Ga0070710_1076205623300005437Corn, Switchgrass And Miscanthus RhizosphereMIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0070762_1001495173300005602SoilMIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTSPLTLSF*
Ga0066905_10059441123300005713Tropical Forest SoilMIYAIFMLLILLTLAAGWRRHWLELPLFFLTALWVLVHLVGDMTTPLTLSF*
Ga0066903_10028618123300005764Tropical Forest SoilMVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF*
Ga0066903_10097358123300005764Tropical Forest SoilMIYAILMLLVLATLGAAWRLSAFALPLFVFTAAWVLVHLIGDMTTPLTLSF*
Ga0066903_10255682523300005764Tropical Forest SoilMVYAIFMLLVLLTLLAQWRRHALELPLFLITLAWVLVHLVGDMTSPLTLSF*
Ga0066903_10344117623300005764Tropical Forest SoilMIYAIFMLLMLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0066903_10700147313300005764Tropical Forest SoilMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF*
Ga0080027_1032695723300005993Prmafrost SoilAFMLLVLLTLVASLREHVLELPLFCITVLWALAYLIADMTSPLTLSF*
Ga0070717_1071678723300006028Corn, Switchgrass And Miscanthus RhizosphereMIYAIFMLLVLLTLVAAWRRHVLELPLFAITVLWVLIHLVGDMTTPLTLSF*
Ga0082021_111855923300006092Wastewater Treatment PlantMIYAMFMLLTLMALAASWFRHPLQLPLFIATVVLIAAHLALDMTTPLTLSF*
Ga0070716_10167939223300006173Corn, Switchgrass And Miscanthus RhizosphereMIYAVFMALVLLTLLASWRRHGLELTLFCITVVGVLAHLITDMTSPLTLSF*
Ga0075367_1097225713300006178Populus EndosphereLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0074059_1214948713300006578SoilMASNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF*
Ga0075424_10149422713300006904Populus RhizosphereFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF*
Ga0126380_1086009923300010043Tropical Forest SoilMAVQLWEGAMVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0126384_1110257013300010046Tropical Forest SoilMAVQLWEGAMVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVVWVLVHLVLDMTDPLTLSF
Ga0074046_1001080483300010339Bog Forest SoilMLREYAAEARMDYAIFMLLLLLALVASWRGHALELPLYLITVVWVLAHLIGEMTTPLALSF*
Ga0074044_1006735053300010343Bog Forest SoilMIYAVFMVLVLLTLVASWRRHLLELVLFCITVVCVLAHLIADMTTSLTLSF*
Ga0126370_1106597823300010358Tropical Forest SoilMALRSGKSAKAVVVYAIFMLLVLLTLAASWRGYALGLLLFLITVAWVLVHLVLDMTDPLTLSF*
Ga0075354_100321823300014308Natural And Restored WetlandsMRIRERAMVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF*
Ga0075343_119969513300014317Natural And Restored WetlandsMRIRERAMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLALDMTTPLTLSF*
Ga0182018_1069961513300014489PalsaMIYAVFMVLVLLALVASWRRHVLELTLFCVTVVCVLAYLIADMTTPLTLSF*
Ga0182024_1086481133300014501PermafrostMIYAAFMLLVLLTLVASSRKHVLELPLFGITVLWVLAHLIADMTSPLTLSF*
Ga0180094_116426623300014881SoilMVYAIFMLLVLATLAATWFRPALQLPLFIVTVAWMLVHLVLDMTTPLTLSF*
Ga0157376_1223675113300014969Miscanthus RhizosphereGLRTTRCAREVDVIYAIFMLLVLLTLVAAWRRHVLELPLFAVTAVWVLIHLVGDMTSPLTLSF*
Ga0167644_108164813300015206Glacier Forefield SoilMLLVLLTLVASLREHVLELPLFCITVLWALAYLIADMTSPLTLSF*
Ga0182036_1025026613300016270SoilMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFAGDMTTPLTLSF
Ga0182041_1206560413300016294SoilDGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0187775_1053038023300017939Tropical PeatlandMIYAIFMLFVLAILVASWRCSTLELPLFVFTVAWVLVHLVLDMT
Ga0187776_1061296423300017966Tropical PeatlandMIYAIFMLLVLAILFASWCGSTLEPPLFVVTVAWVLVHLVLDMTAPLSLSY
Ga0187766_1015667033300018058Tropical PeatlandMIYAIFMLLVLAIIVASWRGSTLELPLFVVTVAWVLVHLVPDMTAPLSLSY
Ga0187766_1123206013300018058Tropical PeatlandMVYAIYMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMMTPLTLSF
Ga0187773_1071141223300018064Tropical PeatlandMMYAIFMLLVLAILVASWRGSTLELPLFVVTVAWVLVHLVLDITAPLSLSY
Ga0187769_1014815223300018086Tropical PeatlandMIYAIFMLLVLAILFASWCGSTLEPPLFVVTVAWVLVHLVLDTTAPLSLSY
Ga0193747_108000533300019885SoilMAFNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLS
Ga0210407_1057846133300020579SoilMLLVLLTLAAGWRGHILELPLFLVTAAWVLVHLVLDMTTPLTLSF
Ga0210395_1022514223300020582SoilMIYAVFMALVLLTLVASWRRHGLELTLFCITVLGVLAHLIADMTSPLTLSF
Ga0210406_1073186623300021168SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTSPLTLSF
Ga0213872_1046809423300021361RhizosphereMLTEYAAEARMVYAIFMLLLLLALVASWREHVLELPLYLITVVWVLAHLVGDMTTPLALS
Ga0213881_1051320523300021374Exposed RockMIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0213874_1039065913300021377Plant RootsAYMIYAIFMLLALLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0213876_1024638623300021384Plant RootsMIYAVFMALVLLTLLASWRRHWVELTLFCITVASVLAHLIADMTSPLTLSF
Ga0213875_1029442813300021388Plant RootsAAHGNKAYMIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0210394_1118061713300021420SoilAAFMLLVLLTLLASSRKHVLELPLFCITVLWALAHLIADMTSPLTLSF
Ga0210392_1142044623300021475SoilMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0210402_1018204413300021478SoilMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSP
Ga0210402_1154037333300021478SoilMIYAIFMLLVLLTLMAAWRRHVLELPLFVVTVLWVLIHLVGDMTSPLTLSF
Ga0126371_1059065423300021560Tropical Forest SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0224564_112792723300024271SoilMIYAVFMVLVLLTLVASWRRHVLELTLFCITVVCVLAYLIADMTTPLTLSF
Ga0207692_1096017123300025898Corn, Switchgrass And Miscanthus RhizosphereMIYAIFMLLVLLTLVAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0207710_1022302513300025900Switchgrass RhizosphereMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0207685_1025618313300025905Corn, Switchgrass And Miscanthus RhizosphereAVFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0207665_1103298123300025939Corn, Switchgrass And Miscanthus RhizosphereMIYAVFMALVLLTLLASWRRHGLELTLFCITVVGVLAHLITDMTSPLTLSF
Ga0210071_104772823300025955Natural And Restored WetlandsMVYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF
Ga0210102_112783723300025971Natural And Restored WetlandsMVYAIFMLLTLMTLAANWLRHPLQLPLFVVAVVWMAAYLVLDMTTPLTLSF
Ga0210117_100077843300025985Natural And Restored WetlandsYAIFMLLTLMTLAANWLRYPLQLPLFIVTVVWMALYLALDMTTPLTLSF
Ga0209656_1015528223300027812Bog Forest SoilVIYAIFMLLVLLTLFAAWRRHVLELPLFAVTVLWVLIHLVGDMTTPLTLSF
Ga0209624_1019401323300027895Forest SoilMIYAVFMTLVLLTLLASWRGHGLELTLFCITVVSVLAHLIADMTSPLTLSF
Ga0209006_1091327123300027908Forest SoilMIYAVFMVLVLLTLIASWRRHVLELTLFCITVVCVPAYLIADITTPLT
Ga0307280_1026309023300028768SoilEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0307282_1022593923300028784SoilMAFNPMEGAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0307308_1011746713300028884SoilAEATMVYAIFMLLVLLTLAAAWRGPALELPLFLVTVAWVLVHLVLDMTSPLSLSF
Ga0311338_1065209433300030007PalsaTLVASSREHVLELPLFWVTVLWSLAYLIADMTSPLTLSF
Ga0265762_104523723300030760SoilMIYAAFMLLVLLTLVASSREHVLELPLFCITVLFSLAYLIADMTSPLTLSF
Ga0302180_1064207323300031028PalsaMIYAAFMLLVLLTLVASSREHVLELPLFCITVLFSLAYLIADMTNPLTLSF
Ga0302324_10247588323300031236PalsaMIYATFMLLVLLTLVASSREHVLELPLFWVTVLWSLAYLIADMTSPLTLSF
Ga0307442_101177443300031274Salt MarshMVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307442_105167533300031274Salt MarshMRIRERAMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307445_1010821123300031364Salt MarshMVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLT
Ga0307445_1025164113300031364Salt MarshMVYAIFMLLTLMTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307424_104538923300031511Salt MarshMVYAIFMLLTLATLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0307419_1003464633300031537Salt MarshMRIRERAMVYAIFMLLTLVTLAANWLRHPLQLPLFIVTVVWMAVHLVLDMTTPLTLSF
Ga0310915_1018068423300031573SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPVTLSF
Ga0310686_10974445213300031708SoilMIYAVFMALVLLTLVASWRRHGLELTLFCITVVGVLAHLIADMTSPLTLSF
Ga0310686_11656319123300031708SoilMLLVLLTLIAAARKHVLELPLFCITVLWALAYLIADMTSPLSLSF
Ga0318547_1083039723300031781SoilGPGCAREADVIYAIFMLLVLLTLIAAWRQHVLELPLFAVTVLWVLIHLVGDMTSPLTLSF
Ga0318550_1058823023300031797SoilSRVATSGPDGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0318523_1039542213300031798SoilMVYAIFMMLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0318517_1041397823300031835SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPRTLSF
Ga0306919_1043249423300031879SoilMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0306923_1101600123300031910SoilSGPDGATMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLSF
Ga0306922_1050885023300032001SoilMIYAIFMLLVLLTLIAAWRRHVLELPLFAVTVLWVLIHFVGDMTTPLTLNF
Ga0318545_1029942323300032042SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTD
Ga0318575_1056367623300032055SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVASVLVHLVLDMTDPLTLSF
Ga0318514_1032490623300032066SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLT
Ga0318525_1045105223300032089SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPLTLS
Ga0311301_1082636323300032160Peatlands SoilMIYAVFMVLVLLTLVASWRRHLLELVLFCITVVCVLAHLIADMTTSLTLSF
Ga0306920_10048154323300032261SoilVVYAIFMLLVLLTLAAGWRGHMLELPLFLVTVAWVLVHLVLDMTDPLTLSF
Ga0306920_10357603023300032261SoilMVYAIFMLLVLLTLLAQWRRHALELPLFLITLVWVLAHLVGDMTSPLTLSF
Ga0315742_1235431613300032756Forest SoilMIYAVFMVLILLTLVASWRRHVLELALFCITVVCVLAYLIADMTTPLTLSF
Ga0335069_1124217823300032893SoilMIYAIFMLLVLLTLVAAWRRHVLELPLFAITVLWVLIHLVGDMTTPLTLSF
Ga0335071_1010681443300032897SoilMIYAIFMLLVLLTLVAAWRRDVLELPLFVVTVLWVLIHLVGDMTTPLTLSF
Ga0318519_1055847623300033290SoilMVYAIFMLLVLLTLAAGWRGHILELPLFLVTVAWVLVHLVLDMTDPVTLS
Ga0326723_0290508_123_2783300034090Peat SoilMVYAIFMLLVLTTLAATWFRPALQLPLFIVTVAWMLVHLVLDMTTPLTLSF
Ga0364925_0003222_1525_16893300034147SedimentMAAMVYAIFMLLVLTTLAATWFRPALQLPLFIVTVAWMLVHLVLDITTPLTLSF
Ga0364927_0018247_1129_12843300034148SedimentMVYAIFMLLVLATLAATWFRPALQLPLFIVTVAWMLVHLVLDITTPLTLSF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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