Metagenome / Metatranscriptome Family F076397

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076397
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	64 residues
Representative Sequence	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Number of Associated Samples	99
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.63 %
% of genes near scaffold ends (potentially truncated)	21.19 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (72.881 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.475 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 89.39% β-sheet: 0.00% Coil/Unstructured: 10.61%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01007	IRK	3.39
PF17042	NBD_C	3.39
PF00795	CN_hydrolase	2.54
PF00072	Response_reg	1.69
PF08281	Sigma70_r4_2	1.69
PF13610	DDE_Tnp_IS240	1.69
PF01051	Rep_3	1.69
PF05988	DUF899	0.85
PF00239	Resolvase	0.85
PF07730	HisKA_3	0.85
PF11746	DUF3303	0.85
PF12770	CHAT	0.85
PF00583	Acetyltransf_1	0.85
PF14417	MEDS	0.85
PF00216	Bac_DNA_binding	0.85
PF07228	SpoIIE	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG5527	Protein involved in initiation of plasmid replication	Mobilome: prophages, transposons [X]	1.69
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.85
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.85
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.85
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.85
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
All Organisms	root	All Organisms	27.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
cellular organisms	root	All Organisms → cellular organisms	27.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.69 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.85 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.85 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.85 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.69 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Actinoplanes hotanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	1.69 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.85 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.39 %
Actinoplanes hotanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	1.69 %
Clostridium sp. C105KSO13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13	0.85 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.85 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02J3BUM	Not Available	511	Open in IMG/M
3300001593\|JGI12635J15846_10070300	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300001593\|JGI12635J15846_10508718	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300002245\|JGIcombinedJ26739_100244984	Not Available	1681	Open in IMG/M
3300002245\|JGIcombinedJ26739_101059548	Not Available	697	Open in IMG/M
3300003219\|JGI26341J46601_10062492	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300004152\|Ga0062386_100440322	Not Available	1053	Open in IMG/M
3300004479\|Ga0062595_101899536	Not Available	570	Open in IMG/M
3300005335\|Ga0070666_10942903	Not Available	639	Open in IMG/M
3300005356\|Ga0070674_100728587	Not Available	850	Open in IMG/M
3300005434\|Ga0070709_10316244	Not Available	1144	Open in IMG/M
3300005435\|Ga0070714_102278052	Not Available	527	Open in IMG/M
3300005436\|Ga0070713_101710812	Not Available	610	Open in IMG/M
3300005437\|Ga0070710_10512681	Not Available	823	Open in IMG/M
3300005439\|Ga0070711_100211924	Not Available	1501	Open in IMG/M
3300005547\|Ga0070693_100388720	Not Available	964	Open in IMG/M
3300005602\|Ga0070762_10236636	Not Available	1131	Open in IMG/M
3300005610\|Ga0070763_10224841	Not Available	1009	Open in IMG/M
3300005712\|Ga0070764_10522694	Not Available	716	Open in IMG/M
3300005842\|Ga0068858_101798494	Not Available	605	Open in IMG/M
3300005994\|Ga0066789_10395922	Not Available	577	Open in IMG/M
3300006028\|Ga0070717_10987712	Not Available	767	Open in IMG/M
3300006057\|Ga0075026_100511523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300006173\|Ga0070716_101277231	Not Available	592	Open in IMG/M
3300006175\|Ga0070712_100504299	Not Available	1015	Open in IMG/M
3300006175\|Ga0070712_101191000	Not Available	663	Open in IMG/M
3300006176\|Ga0070765_101053577	Not Available	769	Open in IMG/M
3300006176\|Ga0070765_101326496	Not Available	678	Open in IMG/M
3300006354\|Ga0075021_11177663	Not Available	503	Open in IMG/M
3300009090\|Ga0099827_10693083	Not Available	880	Open in IMG/M
3300009176\|Ga0105242_11017319	Not Available	837	Open in IMG/M
3300009524\|Ga0116225_1475243	Not Available	555	Open in IMG/M
3300010343\|Ga0074044_10904933	Not Available	577	Open in IMG/M
3300010379\|Ga0136449_104340743	Not Available	524	Open in IMG/M
3300010396\|Ga0134126_12433892	Not Available	570	Open in IMG/M
3300010397\|Ga0134124_10287220	Not Available	1528	Open in IMG/M
3300010876\|Ga0126361_10330453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	558	Open in IMG/M
3300011269\|Ga0137392_10622093	Not Available	896	Open in IMG/M
3300012189\|Ga0137388_10938665	Not Available	799	Open in IMG/M
3300012202\|Ga0137363_10250064	Not Available	1440	Open in IMG/M
3300012203\|Ga0137399_11351585	Not Available	598	Open in IMG/M
3300012205\|Ga0137362_10167576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1884	Open in IMG/M
3300012205\|Ga0137362_10823673	Not Available	795	Open in IMG/M
3300012362\|Ga0137361_11202796	Not Available	680	Open in IMG/M
3300012362\|Ga0137361_11330593	Not Available	642	Open in IMG/M
3300012582\|Ga0137358_10150590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1584	Open in IMG/M
3300012924\|Ga0137413_10394685	Not Available	993	Open in IMG/M
3300012957\|Ga0164303_10392723	Not Available	854	Open in IMG/M
3300012986\|Ga0164304_10380497	Not Available	996	Open in IMG/M
3300013296\|Ga0157374_11704074	Not Available	655	Open in IMG/M
3300015242\|Ga0137412_10276750	Not Available	1322	Open in IMG/M
3300015264\|Ga0137403_10340523	Not Available	1389	Open in IMG/M
3300020062\|Ga0193724_1060123	Not Available	799	Open in IMG/M
3300020199\|Ga0179592_10269185	Not Available	762	Open in IMG/M
3300020579\|Ga0210407_10108324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2116	Open in IMG/M
3300020579\|Ga0210407_10226518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1455	Open in IMG/M
3300020579\|Ga0210407_10688121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300020580\|Ga0210403_10805134	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300020582\|Ga0210395_10059170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2810	Open in IMG/M
3300020582\|Ga0210395_10674684	Not Available	774	Open in IMG/M
3300020583\|Ga0210401_10083001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3016	Open in IMG/M
3300020583\|Ga0210401_10921182	Not Available	733	Open in IMG/M
3300021046\|Ga0215015_10480604	Not Available	602	Open in IMG/M
3300021046\|Ga0215015_10518064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13	876	Open in IMG/M
3300021168\|Ga0210406_10229218	Not Available	1532	Open in IMG/M
3300021168\|Ga0210406_11361138	Not Available	508	Open in IMG/M
3300021171\|Ga0210405_10650331	Not Available	818	Open in IMG/M
3300021171\|Ga0210405_10831869	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021171\|Ga0210405_11261629	Not Available	544	Open in IMG/M
3300021178\|Ga0210408_10046653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3391	Open in IMG/M
3300021178\|Ga0210408_10432833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1047	Open in IMG/M
3300021181\|Ga0210388_10206290	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300021402\|Ga0210385_10105899	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300021403\|Ga0210397_10086133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2093	Open in IMG/M
3300021405\|Ga0210387_10273852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300021420\|Ga0210394_11634081	Not Available	541	Open in IMG/M
3300021474\|Ga0210390_10614813	Not Available	910	Open in IMG/M
3300021475\|Ga0210392_11510351	Not Available	502	Open in IMG/M
3300021478\|Ga0210402_10231583	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300021559\|Ga0210409_10164179	Not Available	2032	Open in IMG/M
3300021559\|Ga0210409_11533659	Not Available	542	Open in IMG/M
3300025320\|Ga0209171_10291986	Not Available	873	Open in IMG/M
3300025898\|Ga0207692_10385009	Not Available	871	Open in IMG/M
3300025899\|Ga0207642_10819846	Not Available	593	Open in IMG/M
3300025905\|Ga0207685_10266126	Not Available	835	Open in IMG/M
3300025906\|Ga0207699_10461457	Not Available	912	Open in IMG/M
3300025927\|Ga0207687_11851790	Not Available	516	Open in IMG/M
3300025928\|Ga0207700_10945549	Not Available	771	Open in IMG/M
3300026551\|Ga0209648_10111203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2227	Open in IMG/M
3300026557\|Ga0179587_10312950	Not Available	1014	Open in IMG/M
3300027172\|Ga0208098_1016540	Not Available	711	Open in IMG/M
3300027537\|Ga0209419_1063014	Not Available	726	Open in IMG/M
3300027565\|Ga0209219_1011386	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300027610\|Ga0209528_1063427	Not Available	818	Open in IMG/M
3300027635\|Ga0209625_1096766	Not Available	662	Open in IMG/M
3300027667\|Ga0209009_1033344	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300027727\|Ga0209328_10019560	Not Available	2065	Open in IMG/M
3300027812\|Ga0209656_10231814	Not Available	881	Open in IMG/M
3300027824\|Ga0209040_10015975	All Organisms → cellular organisms → Bacteria	5036	Open in IMG/M
3300027855\|Ga0209693_10182594	Not Available	1034	Open in IMG/M
3300027884\|Ga0209275_10623134	Not Available	620	Open in IMG/M
3300028047\|Ga0209526_10887785	Not Available	543	Open in IMG/M
3300028047\|Ga0209526_10918062	Not Available	531	Open in IMG/M
3300028379\|Ga0268266_11138833	Not Available	755	Open in IMG/M
3300028906\|Ga0308309_10279879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1405	Open in IMG/M
3300029636\|Ga0222749_10731942	Not Available	541	Open in IMG/M
3300030743\|Ga0265461_13754963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	516	Open in IMG/M
3300031057\|Ga0170834_112261369	Not Available	982	Open in IMG/M
3300031122\|Ga0170822_10421824	Not Available	565	Open in IMG/M
3300031231\|Ga0170824_110241632	Not Available	864	Open in IMG/M
3300031469\|Ga0170819_13335969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	668	Open in IMG/M
3300031474\|Ga0170818_102984297	Not Available	774	Open in IMG/M
3300031708\|Ga0310686_108344230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2035	Open in IMG/M
3300031708\|Ga0310686_113626708	Not Available	1840	Open in IMG/M
3300031718\|Ga0307474_11588585	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031754\|Ga0307475_10215112	Not Available	1538	Open in IMG/M
3300032160\|Ga0311301_11295190	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300032160\|Ga0311301_12514276	Not Available	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.22%
Host-Associated	Host-Associated	6.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.29%
Plants	Host-Associated → Plants	6.78%
Aquatic	Environmental → Aquatic	5.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.08%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Sediment	Environmental → Aquatic → Sediment	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.93%
Loam	Environmental → Terrestrial → Soil → Loam	29.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.69%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_08289690	2170459013	Grass Soil	MSLDIWCDLLERELKMALEDLEKIRKSDKAQARNTCHMLRAALGNARHYLTEIQDSLKN
JGI12635J15846_100703002	3300001593	Forest Soil	MVRSLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDGLKN*
JGI12635J15846_105087182	3300001593	Forest Soil	MPNEEDQMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
JGIcombinedJ26739_1002449843	3300002245	Forest Soil	MPIEMWCDLLERELKIALEDLEKVRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
JGIcombinedJ26739_1010595481	3300002245	Forest Soil	MPNEEDQTSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHLLRAALGNARHYLSEIQDSLKN*
JGI26341J46601_100624922	3300003219	Bog Forest Soil	MANEEDQTSFDIWCDLLERELNIALEDLEKIRKADKAQAKNTCHMVRAALGNARHYLSEIQDSLKN*
Ga0062386_1004403222	3300004152	Bog Forest Soil	MPNEEDEEMSFDIWCDLLERELKIALEDLALIRKADKTQVKDICYMVRAALGNARHYLREIQDSQKE*
Ga0062595_1018995362	3300004479	Soil	YSYPMPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070666_109429032	3300005335	Switchgrass Rhizosphere	MPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070674_1007285871	3300005356	Miscanthus Rhizosphere	MSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070709_103162442	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070714_1022780521	3300005435	Agricultural Soil	MPNEEDQTSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070713_1017108122	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070710_105126812	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070711_1002119241	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDEEMSFDIWCDLLERELKIALEDLALIRKADKTQVKDICYMVRAALGNARHYLREIQDSHKE*
Ga0070693_1003887201	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMSFDKWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070762_102366364	3300005602	Soil	MPNEEDQMPIEIWCDLLERELKIALEHLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070763_102248412	3300005610	Soil	MVRSLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070764_105226941	3300005712	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0068858_1017984942	3300005842	Switchgrass Rhizosphere	FDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0066789_103959221	3300005994	Soil	SMPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0070717_109877122	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMPIEIWCDLLERELKIALEDLEKVRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0075026_1005115233	3300006057	Watersheds	IWCDLLERELKIALEDLEKIRKSENAQAKNTCLMLRAALGNARHYLSEIQDSL*
Ga0070716_1012772312	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLDRELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070712_1005042991	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLERELKLALEDLAKVRKAEKAQARNTCHMLRAALANARHYLSEIQDSLKN*
Ga0070712_1011910001	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0070765_1010535772	3300006176	Soil	MSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN*
Ga0070765_1013264962	3300006176	Soil	MANEEDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQGKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0075021_111776632	3300006354	Watersheds	MPNEEDQMSFDIWCDLLERELKIALEDLEKVRKSDKAQAKNTCHMLRAALGNARHYLSEIQD
Ga0099827_106930832	3300009090	Vadose Zone Soil	MANEEDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0105242_110173192	3300009176	Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLGEIQDSLKN*
Ga0116225_14752432	3300009524	Peatlands Soil	MPDEEVQMSFDIWCDLLERELKIALEDLEKIRKVDKAQAKNTCHMLRAALGNARHYLSEIQGSLKN*
Ga0074044_109049331	3300010343	Bog Forest Soil	MPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0136449_1043407432	3300010379	Peatlands Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKADKAQAKNTCHMIRAALGNARHYLSEIQGSLKN*
Ga0134126_124338922	3300010396	Terrestrial Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIEDSLKN*
Ga0134124_102872201	3300010397	Terrestrial Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIHDSLKN*
Ga0126361_103304532	3300010876	Boreal Forest Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKADKAQAKNTCHMARAALGNARHYLSEIQDSLKN*
Ga0137392_106220932	3300011269	Vadose Zone Soil	MPNEEDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0137388_109386652	3300012189	Vadose Zone Soil	MPNEEDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLK
Ga0137363_102500641	3300012202	Vadose Zone Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0137399_113515851	3300012203	Vadose Zone Soil	MPNKEDQMSLDLWCDLLERELKIALEDLEKIRKSDKAQAKNTSHMLRAALGNARHYLSEIQDSLKN*
Ga0137362_101675762	3300012205	Vadose Zone Soil	MPNEEDQMSFDLWCDLLERELKIALEDLEKIRKSDKAQAKNTSHMLRAALGNARHYLSEIQASLKN*
Ga0137362_108236732	3300012205	Vadose Zone Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMVRAALGNARHYLSEIQDSLKN*
Ga0137361_112027961	3300012362	Vadose Zone Soil	MPNEEDQMSFDLWCDLLERELKIALEDLEKIRKSDKAQAKNTSHMLRAALGNARHYLSEIQDSLKN*
Ga0137361_113305932	3300012362	Vadose Zone Soil	MQNEEDQMSFEIRCDLLERELKIALGDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0137358_101505902	3300012582	Vadose Zone Soil	VPEAVKNPSYSYSMPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQNSLKN*
Ga0137413_103946852	3300012924	Vadose Zone Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSGKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0164303_103927232	3300012957	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEI
Ga0164304_103804971	3300012986	Soil	MANEEDEEMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN*
Ga0157374_117040741	3300013296	Miscanthus Rhizosphere	DIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN*
Ga0137412_102767502	3300015242	Vadose Zone Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSGKPQAKNTCYMLRAALGNARHYLSEIQDSLEN*
Ga0137403_103405232	3300015264	Vadose Zone Soil	MPNEEGQMSFDIWCDLLERELKIALEDLEKIRKSEKAQAKNTCLMLRAALGNARHYLSEIQDSLKN*
Ga0193724_10601231	3300020062	Soil	MPNEEDQISFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0179592_102691851	3300020199	Vadose Zone Soil	MSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQD
Ga0210407_101083242	3300020579	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSEKAQAKNTCLMLRAALGNARHYLSEIQDSL
Ga0210407_102265182	3300020579	Soil	MSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN
Ga0210407_106881212	3300020579	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHYLSEIQDSLKN
Ga0210403_108051342	3300020580	Soil	MPNEEEQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0210395_100591704	3300020582	Soil	MSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNACHMLRAALGNARHYLSEIQDSLKN
Ga0210395_106746842	3300020582	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHYLSEIQDSLKN
Ga0210401_100830012	3300020583	Soil	MPNEKDQMSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN
Ga0210401_109211821	3300020583	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHY
Ga0215015_104806041	3300021046	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0215015_105180641	3300021046	Soil	MPNEEYQTSFDIWCDLLERELNIALEDLEKLRKADKAQAKNTCHMVRAALGNARHYLSEIQDSLKN
Ga0210406_102292185	3300021168	Soil	MPNEEDQMSLDIWCDLLERELKMALEDLEKIRKSDNAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0210406_113611381	3300021168	Soil	MPNEKDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMVRAALGNARHYLSEIQDSLKN
Ga0210405_106503311	3300021171	Soil	MPNEEDQMSFDVWCDLLERELKIALEDLEKIRKSDNAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0210405_108318691	3300021171	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQVKNICHMLRAALGNARHYLSEIQDSLKN
Ga0210405_112616292	3300021171	Soil	TKKDQMSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN
Ga0210408_100466537	3300021178	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKVRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0210408_104328332	3300021178	Soil	MSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQESLKN
Ga0210388_102062903	3300021181	Soil	MSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHYLSEIQDSLKN
Ga0210385_101058993	3300021402	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNACHMLRAALGDARHYLSEIQDSLKN
Ga0210397_100861333	3300021403	Soil	DQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCRMLRAALGNARHYLSEIPLCPFFCPSFL
Ga0210387_102738523	3300021405	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLAKIRKADKAAAKSTCYMLRAALGNARHYLREIQESHRE
Ga0210394_116340812	3300021420	Soil	MPNEKDQMSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEI
Ga0210390_106148132	3300021474	Soil	MANEEDQMSFEVWCDLLERELKIALEDLEKIRKSDKAQAKNACHMLRAALGNARHYLSEIQDSLKN
Ga0210392_115103511	3300021475	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHYLSE
Ga0210402_102315831	3300021478	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNACHMLRAALGNARHYLS
Ga0210409_101641791	3300021559	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0210409_115336591	3300021559	Soil	SYSYSMPNEKDQMSFDRWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN
Ga0209171_102919862	3300025320	Iron-Sulfur Acid Spring	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQNSLKN
Ga0207692_103850092	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIEDSLKN
Ga0207642_108198461	3300025899	Miscanthus Rhizosphere	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0207685_102661262	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSFDVWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0207699_104614572	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0207687_118517901	3300025927	Miscanthus Rhizosphere	SMPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0207700_109455492	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209648_101112033	3300026551	Grasslands Soil	MPNEEDQMSFEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0179587_103129502	3300026557	Vadose Zone Soil	LPEAVKNPSYSYSMPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLTEIQDSLKN
Ga0208098_10165401	3300027172	Forest Soil	MVRSLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNGRHYLSEIQDSLKN
Ga0209419_10630142	3300027537	Forest Soil	MPNEEDQMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209219_10113862	3300027565	Forest Soil	MPNEEDQMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDGLKN
Ga0209528_10634272	3300027610	Forest Soil	MPIEMWCDLLERELKIALEDLEKIRKSEKAQAKNTCLMLRAALGNARHYLSEIQDSL
Ga0209625_10967662	3300027635	Forest Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSIKK
Ga0209009_10333442	3300027667	Forest Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKARAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209328_100195601	3300027727	Forest Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQGKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209656_102318143	3300027812	Bog Forest Soil	KIQANSYSMANEEDQTSFDIWCDLLERELNIALEDLEKIRKADKAQAKNTCHMVRAALGNARHYLSEIQDSLKN
Ga0209040_100159755	3300027824	Bog Forest Soil	MANEEDQTSFDIWCDLLERELNIALEDLEKIRKADKAQAKNTCHMVRAALGNARHYLSEIQDSLKN
Ga0209693_101825942	3300027855	Soil	MPNEEDQMPIEIWCDLLERELKIALEDLEKIRKSDKAQAKNACHMLRAALGNARHYLSEIQDSLKN
Ga0209275_106231341	3300027884	Soil	MPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQGKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209526_108877851	3300028047	Forest Soil	PMPNEEDQMSFDVWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0209526_109180621	3300028047	Forest Soil	MPIEMWCDLLERELKIALEDLEKVRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0268266_111388332	3300028379	Switchgrass Rhizosphere	MPNEDQMSFDIWCDLLERELKIALEDLEKIRKSDKPQAKNTCYMLRAALGNARHYLSEIQDSLKN
Ga0308309_102798791	3300028906	Soil	MPIEIWCDLLERELKIALEDLEKIRKSDKAEAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0222749_107319422	3300029636	Soil	MGDLLERELKIALEDLEKIRKSGKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0265461_137549631	3300030743	Soil	HIWCDLLERELKIGLEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKS
Ga0170834_1122613691	3300031057	Forest Soil	MPNEEGQMSFDIWCDLLERELKMALEDLEKIRKSDKAQAKNSCHMLRAGLGNARHYLTEIQDSLKN
Ga0170822_104218242	3300031122	Forest Soil	MPNEEDQMSFDIWCDLLDRELKIALEDLEKIRKSDKAQAKNSCHMLRAGLGNARHYLTEIQDSLKN
Ga0170824_1102416322	3300031231	Forest Soil	MPNEEDKMSLDIWCDLLERELKMALEDLEKIRKSDKAQAKNSCHMLRAGLGNARHYLTEIQDSLKN
Ga0170819_133359692	3300031469	Forest Soil	MPNEEDKMSLDIWCDLLERELKMALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEVQDSLKS
Ga0170818_1029842971	3300031474	Forest Soil	MPNEEDKMSLDIWCDLLERELKMALEDLEKIRKSDKAQAKNNCHMLRAGLGNARHYLTEIQDS
Ga0310686_1083442303	3300031708	Soil	MPNEEDQMPMEIWCDLLERELKIALEDLEKIRKSDKAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0310686_1136267083	3300031708	Soil	MPIEIWCDLLERELKIALEDLEKIRKSDKAQTKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0307474_115885852	3300031718	Hardwood Forest Soil	SMPNEEDQMSFDIWCDLLERELKIALEDLEKIRKSDKAQAKNICHMLRAALGNARHYLSEIQDSLKN
Ga0307475_102151122	3300031754	Hardwood Forest Soil	MPNEEDRMSFDVWCDLLERELKIALEDLEKIRKSDNAQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0311301_112951901	3300032160	Peatlands Soil	EIWCDLLERELKIALEDLEKIRKSDKTQAKNTCHMLRAALGNARHYLSEIQDSLKN
Ga0311301_125142762	3300032160	Peatlands Soil	SSFMPNEEDQMSFDIWCDLLERELKIALEDLEKIRKADKAQAKNTCHMIRAALGNARHYLSEIQGSLKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences