Metagenome Family F076416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076416
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	90 residues
Representative Sequence	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH
Number of Associated Samples	98
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.47 %
% of genes near scaffold ends (potentially truncated)	28.81 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.915 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.051 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.712 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.86% β-sheet: 0.00% Coil/Unstructured: 38.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02622	DUF179	50.85
PF00107	ADH_zinc_N	7.63
PF08240	ADH_N	3.39
PF13532	2OG-FeII_Oxy_2	2.54
PF11127	DUF2892	1.69
PF10431	ClpB_D2-small	1.69
PF13823	ADH_N_assoc	1.69
PF13202	EF-hand_5	0.85
PF00005	ABC_tran	0.85
PF06463	Mob_synth_C	0.85
PF12838	Fer4_7	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	50.85
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.76 %
Unclassified	root	N/A	4.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.76 %
Unclassified	root	N/A	4.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.92 %
Unclassified	root	N/A	4.24 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.32 %
Unclassified	root	N/A	4.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	34.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.32 %
Unclassified	root	N/A	4.24 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	10.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.32 %
Unclassified	root	N/A	4.24 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9.32 %
Unclassified	root	N/A	4.24 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	9.32 %
Unclassified	root	N/A	4.24 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	9.32 %
Unclassified	root	N/A	4.24 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	9.32 %
Unclassified	root	N/A	4.24 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Rhabditidae incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Diploscapter	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	10.17 %
Microbispora sp. GKU 823	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	9.32 %
Unclassified	root	N/A	4.24 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11212383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300001305\|C688J14111_10008744	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300002907\|JGI25613J43889_10092021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300004081\|Ga0063454_100325234	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300004153\|Ga0063455_100030126	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300004156\|Ga0062589_100123298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1713	Open in IMG/M
3300005167\|Ga0066672_10200903	Not Available	1270	Open in IMG/M
3300005171\|Ga0066677_10081441	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300005172\|Ga0066683_10252589	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005174\|Ga0066680_10042205	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300005175\|Ga0066673_10188406	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005176\|Ga0066679_10045653	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300005176\|Ga0066679_10813051	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005177\|Ga0066690_10701317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M
3300005184\|Ga0066671_10061329	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300005187\|Ga0066675_10197408	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300005187\|Ga0066675_10318122	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300005340\|Ga0070689_100787522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	835	Open in IMG/M
3300005440\|Ga0070705_100028088	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300005440\|Ga0070705_100498248	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005444\|Ga0070694_100340850	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005446\|Ga0066686_10431220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	901	Open in IMG/M
3300005447\|Ga0066689_10518326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300005450\|Ga0066682_10244350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	1155	Open in IMG/M
3300005451\|Ga0066681_10610560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	671	Open in IMG/M
3300005467\|Ga0070706_100181005	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300005529\|Ga0070741_10208571	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300005536\|Ga0070697_100257141	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300005536\|Ga0070697_102022764	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005537\|Ga0070730_10127696	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300005546\|Ga0070696_100746425	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005549\|Ga0070704_100782311	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005553\|Ga0066695_10437659	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005554\|Ga0066661_10156171	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300005555\|Ga0066692_10175067	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300005556\|Ga0066707_10644537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	671	Open in IMG/M
3300005556\|Ga0066707_10686079	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300005557\|Ga0066704_10619962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	693	Open in IMG/M
3300005558\|Ga0066698_11054313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	515	Open in IMG/M
3300005559\|Ga0066700_10146056	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005561\|Ga0066699_10358290	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005575\|Ga0066702_10627729	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005719\|Ga0068861_101764826	Not Available	613	Open in IMG/M
3300006032\|Ga0066696_10614715	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300006032\|Ga0066696_10822191	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006046\|Ga0066652_100210049	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300006173\|Ga0070716_100700119	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300006755\|Ga0079222_12381667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300006791\|Ga0066653_10535416	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006796\|Ga0066665_11442120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	534	Open in IMG/M
3300006800\|Ga0066660_10605278	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300006800\|Ga0066660_11187582	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006854\|Ga0075425_100002063	All Organisms → cellular organisms → Bacteria → Proteobacteria	19922	Open in IMG/M
3300007265\|Ga0099794_10305046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	825	Open in IMG/M
3300009088\|Ga0099830_11726463	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009137\|Ga0066709_100090746	All Organisms → cellular organisms → Bacteria	3696	Open in IMG/M
3300009137\|Ga0066709_101436484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	1000	Open in IMG/M
3300009137\|Ga0066709_102280419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	743	Open in IMG/M
3300009147\|Ga0114129_10803723	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300010333\|Ga0134080_10411273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300010336\|Ga0134071_10310740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	792	Open in IMG/M
3300010400\|Ga0134122_10396091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1218	Open in IMG/M
3300010400\|Ga0134122_12878257	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010401\|Ga0134121_11299949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	733	Open in IMG/M
3300010401\|Ga0134121_11446548	Not Available	700	Open in IMG/M
3300011270\|Ga0137391_11482998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	523	Open in IMG/M
3300012096\|Ga0137389_10323089	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	1309	Open in IMG/M
3300012096\|Ga0137389_10448040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1105	Open in IMG/M
3300012189\|Ga0137388_11230895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	687	Open in IMG/M
3300012201\|Ga0137365_10621334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	791	Open in IMG/M
3300012203\|Ga0137399_10065194	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300012212\|Ga0150985_107393663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300012469\|Ga0150984_114969928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300012469\|Ga0150984_122106192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	826	Open in IMG/M
3300012469\|Ga0150984_122154923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	828	Open in IMG/M
3300012683\|Ga0137398_10994694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	581	Open in IMG/M
3300012922\|Ga0137394_10054298	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300012922\|Ga0137394_10152152	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300012922\|Ga0137394_10165980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1881	Open in IMG/M
3300012929\|Ga0137404_10000027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	72464	Open in IMG/M
3300012944\|Ga0137410_10065143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2629	Open in IMG/M
3300012957\|Ga0164303_10387891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	858	Open in IMG/M
3300014150\|Ga0134081_10311493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	568	Open in IMG/M
3300015195\|Ga0167658_1094259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	652	Open in IMG/M
3300015241\|Ga0137418_10126537	All Organisms → cellular organisms → Bacteria → Proteobacteria	2273	Open in IMG/M
3300015357\|Ga0134072_10286567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	608	Open in IMG/M
3300015359\|Ga0134085_10154700	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300015371\|Ga0132258_10667972	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300017657\|Ga0134074_1070916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	1185	Open in IMG/M
3300017659\|Ga0134083_10402394	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300018431\|Ga0066655_10914914	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300019789\|Ga0137408_1250429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3360	Open in IMG/M
3300020202\|Ga0196964_10226507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	871	Open in IMG/M
3300020202\|Ga0196964_10312521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	746	Open in IMG/M
3300025917\|Ga0207660_10505555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	981	Open in IMG/M
3300026296\|Ga0209235_1267922	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026297\|Ga0209237_1120253	Not Available	1106	Open in IMG/M
3300026300\|Ga0209027_1099153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1045	Open in IMG/M
3300026301\|Ga0209238_1034572	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300026318\|Ga0209471_1138926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1017	Open in IMG/M
3300026319\|Ga0209647_1033907	All Organisms → cellular organisms → Bacteria	2949	Open in IMG/M
3300026320\|Ga0209131_1078507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1786	Open in IMG/M
3300026325\|Ga0209152_10068587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1279	Open in IMG/M
3300026537\|Ga0209157_1185594	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300026548\|Ga0209161_10068751	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300026550\|Ga0209474_10051276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2952	Open in IMG/M
3300026550\|Ga0209474_10093278	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300026550\|Ga0209474_10423415	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300026552\|Ga0209577_10637747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GKU 823	620	Open in IMG/M
3300027671\|Ga0209588_1174110	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027846\|Ga0209180_10645372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	581	Open in IMG/M
3300027857\|Ga0209166_10187017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1118	Open in IMG/M
3300031720\|Ga0307469_10824721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	853	Open in IMG/M
3300031720\|Ga0307469_10949521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	800	Open in IMG/M
3300032002\|Ga0307416_102623051	Not Available	601	Open in IMG/M
3300032174\|Ga0307470_11075956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	645	Open in IMG/M
3300032180\|Ga0307471_102330229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	676	Open in IMG/M
3300032205\|Ga0307472_101440800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.37%
Host-Associated	Host-Associated	7.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.37%
Plants	Host-Associated → Plants	7.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.12%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Sand	Environmental → Terrestrial → Soil → Sand	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	42.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.24%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.39%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.54%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_112123831	3300000953	Soil	SGSRALSAASDLADLLRLAQEAVERLAQEVYGASFEHAELIARELQRLRRSADTLRRGVEEHVAREEGATVQRGHPLRRSSDRSLS*
C688J14111_100087443	3300001305	Soil	MDGRSGSRALSAASDLVELLRLAEASAERVAQEVFGVPYEHAELIERELQRLRRSADKLKGAIDEYVAHQEGATVERGHPLRRAGDRHHN*
JGI25613J43889_100920212	3300002907	Grasslands Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSHDIENYVAREEGANVRRGHPLRRSSDRGAH*
Ga0063454_1003252342	3300004081	Soil	CPLASNYARSMDGRSGSRALSAASDLVELLRLAEASAERVAQEVFGVPYEHAELIERELQRLRRSADKLKGAIDEYVAHQEGATVERGHPLRRAGDRHHN*
Ga0063455_1000301262	3300004153	Soil	MDAQSGSRALGAAKDLLELLRLAEAAAERAAQEVYGATFEHAELIERELTRLRRSAEKLSRDIQDYVARAEGAAVGRGHPLRRATDRR*
Ga0062589_1001232981	3300004156	Soil	MDAQSGSRALSAASDLADLLRLAQEAVERLAQEVYGASFEHAELIARELQRLRRSADTLRRGVEEHVAREEGATVQRGHPLRRSSDRSLS*
Ga0066672_102009031	3300005167	Soil	NDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGSSVERGHPLRRTSDRGAH*
Ga0066677_100814413	3300005171	Soil	MDAQSSSRALGAARDLLELLHLAQAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREQGETAARGHPLRRASDRP*
Ga0066683_102525892	3300005172	Soil	MDAQSGGRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADTLQKTVEDHVSREEGASVERGHPMRRAGDHQLGR*
Ga0066680_100422053	3300005174	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIGRELQRLRRSADKLQKTVEDHVSREEGASVERGHPLRRTSDHR*
Ga0066673_101884062	3300005175	Soil	MDAQSSSRALGAARDLLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRP*
Ga0066679_100456532	3300005176	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGSSVERGHPLRRTSDRGAH*
Ga0066679_108130512	3300005176	Soil	MLAVYAAPMDAESGSRALSAANDLVELLRLAHAAAERTAQEVYGVAYEHAELIARDLQRLRRSAEKLGHDIENYVAREEGATVRRGHPLRRSSDRGAH*
Ga0066690_107013172	3300005177	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGSSVERGHPLRRTSDRG
Ga0066671_100613293	3300005184	Soil	MDAQSSSRALGAARDLLELLQLAQAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREQGETAARGHPLRRASDRP*
Ga0066675_101974082	3300005187	Soil	MDAQSGSRALGAAHDLLELLRLAASAAERLAQELYGASYEHAELIERELQRLRRSADKLAREAEEYVAREESAGGSRVHPLRRASDHP*
Ga0066675_103181222	3300005187	Soil	MDAQSSSRALGAARDLLELLRLAEAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREEGETAARGHPLRRASDRH*
Ga0070689_1007875222	3300005340	Switchgrass Rhizosphere	MDAQSGSRALSAASDLADLLRLAQEAVERLAQEVYGASFEHAELIARELQRLRRSADTLKRGVDEHVARAEGDSVQRGHPLRRSSDRSSLS*
Ga0070705_1000280881	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEEYVARAEPPGSQVHPLRR
Ga0070705_1004982482	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLGTMDAETGSRALSAADDLAELLRLASSAAERLSQEVYGPSFDHSELITHELRRLRRSVEKLHADVSAFVSREEGATVERGHPLRRASDRGARP*
Ga0070694_1003408502	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEEYVARAEPAGSQVHPLRRGTDPH*
Ga0066686_104312202	3300005446	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAREVYGVSYEHAELIERELQRLRRSADKLQKTVEDHVSREEGATVDRGHPLRRAGDHHLGR*
Ga0066689_105183262	3300005447	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRASDHP*
Ga0066682_102443502	3300005450	Soil	MDAQSGGRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELLERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR*
Ga0066681_106105602	3300005451	Soil	MDAQSGSRALSAVNDLVEMLRLAQSAAERVAQEVYGVSYEHSQLLERELQRLRRSADKLQKTVEDYVSREEGASVERGHPLRRTSDRGAH*
Ga0070706_1001810052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEEYVARAEPPGSQVHPLRRGSDPH*
Ga0070741_102085711	3300005529	Surface Soil	MDAQSGSRALGAAQDLLALLRLAQAAAERAAQEVYGASFEHAELIERELARLRRSAEKLSRDIQEYVARAEGAAVT
Ga0070697_1002571411	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRMRRSADKLARDVEDYVARAEPPGSQVHPLRRGSDPH*
Ga0070697_1020227642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RRRLCCPEMDAETGSRALSAASDLVELLRLAHGAAERVAQEVYGVSFEHAELIARELQRLRRSADKLTQDVGSYIAREERTTIERGHPLRRAGDRNSGQRP*
Ga0070730_101276963	3300005537	Surface Soil	MDAESGSRALSAANDLVELLRLAHAAAERVAQEVYGVAFEHAELITRDLQRLRRSAEKLGHDIENYVSREEGATVQRGHPLRRSSDRGAH*
Ga0070696_1007464251	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LQFMDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEDYVARAEPPGSQVHPLRRGSDPH*
Ga0070704_1007823112	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SPRIATLQSMDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEEYVARAEPPGSQVHPLRRGSDPH*
Ga0066695_104376592	3300005553	Soil	MDAQSGGRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR*
Ga0066661_101561711	3300005554	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGH
Ga0066692_101750672	3300005555	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH*
Ga0066707_106445372	3300005556	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIGRELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHHLGR*
Ga0066707_106860791	3300005556	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH*
Ga0066704_106199622	3300005557	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGATVDRGHPLRRAGDHHLGR*
Ga0066698_110543131	3300005558	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAREVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR*
Ga0066700_101460562	3300005559	Soil	MDAQSGSRALSAVNDLVEMLRLAQSAAERVAQEVYGASYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH*
Ga0066699_103582901	3300005561	Soil	SSRALGAARDLLELLRLAEAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRP*
Ga0066702_106277292	3300005575	Soil	LLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRP*
Ga0068861_1017648262	3300005719	Switchgrass Rhizosphere	MDAQSGSRALSAASDLADLLRLAQEAVERLAQEVYGASFEHAELIARELQRLRRSADTLRRGVEEHVAREEGATVQRGHPLRRSGDRSSVS*
Ga0066696_106147152	3300006032	Soil	MLAVYAAPMDAESGSRALSAANDLVELLRLAHAAAERTAQEVYGVAYEHAELIARDLQRLRRSAEKLGHDIENYVAREEGATVRRGHPLRRSSDRGAP*
Ga0066696_108221912	3300006032	Soil	MDAQSGSRALGAAHDLLELLRLAASAAERLAQELYGASYEHAELIERELQRLRRGADKLAREAEEYVAREESAGGSRVHPLRRASDHP*
Ga0066652_1002100492	3300006046	Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSHDIENYVAREEGATVRRGHPLRRSSDRGAH*
Ga0070716_1007001192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRVRRSADKLARDVEEYVARAEPPGSQVHPLRRG
Ga0079222_123816671	3300006755	Agricultural Soil	MDAEAGSRALSAADDLAELLRLASSAAERLSHEVYGPSFDHAELIAHELRRLRRSVDKLHADVTAFVSREEGAT
Ga0066653_105354162	3300006791	Soil	MDAQSGSRALSAANDLVEMLRLTQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHH*
Ga0066665_114421201	3300006796	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELLERELQRLRRSADKLQKTVEEHVSREEGAIVERGHPLRRTSDRGAH*
Ga0066660_106052782	3300006800	Soil	MDAQSSSRALGAARDLLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRH*
Ga0066660_111875821	3300006800	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGATVDRGHPFRRAGDHH
Ga0075425_1000020637	3300006854	Populus Rhizosphere	MDAEAGSRALSAADDLAELLRLASSAAERLSHEVYGPSFDHAELIAHELRRLRRSVDKLHADVTAFVSREEGATVERGHPLRRSGDRGASA*
Ga0099794_103050461	3300007265	Vadose Zone Soil	PMDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPMRRTSDRGAH*
Ga0099830_117264632	3300009088	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEDHVSRDEGASVERGHPMRRAGDHH*
Ga0066709_1000907467	3300009137	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH*
Ga0066709_1014364842	3300009137	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELLERELQRLRRSADKLQKTVEDYVSREEGASVERGQPMRRAGDHH*
Ga0066709_1022804192	3300009137	Grasslands Soil	VSFMLAVYAAPMDAESGSRALSAANDLVELLRLAHAAAERTAQEVYGVAYEHAELIARDLQRLRRSAEKLGHDIENYVAREEGATVRRGHPLRRSSDRGAH*
Ga0114129_108037232	3300009147	Populus Rhizosphere	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEDHVSREEGAVVERGHPLRRAGDRA*
Ga0134080_104112732	3300010333	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADTLQKTVEDHVSREEGASVERGHPMRRAGDHH*
Ga0134071_103107402	3300010336	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR*
Ga0134122_103960912	3300010400	Terrestrial Soil	MDAETGSRALSAADDLAELLRLASSAAERLSHEVYGPSFDHSELITHELRRLRRSVEKLHADVAAFVSREEGATVERGHPLRRASDRGAHP*
Ga0134122_128782572	3300010400	Terrestrial Soil	GQPALVGASRLPAPFTGAGYAAPMDAEAGSRALSAANDLVELLRLAHGAAERVAQEVYGVSFEHAELIARELARLRRSADKLTQDVGSYIAREERTTIERGHPLRRAGDRNSGQRP*
Ga0134121_112999492	3300010401	Terrestrial Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAYEHAELITRDLQRLRRSAEKLGHDIENYVAREEGATVQRGHPLRRSSDRGAH*
Ga0134121_114465481	3300010401	Terrestrial Soil	GSRALGAANDLVDLLRLAGAAAERVSQETFGPAYEHAELLARELQRLRRSAAKLATDIENFVSREEGATVERGYPLRRASDAHRS*
Ga0137391_114829982	3300011270	Vadose Zone Soil	PARFTRARYAGPMDAQSGSRALSAANDLVEMLRLALSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRASDHH*
Ga0137389_103230891	3300012096	Vadose Zone Soil	MDAQSGSRALSAVNDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEDHVSREEGASVERGHPMRRAGDHH*
Ga0137389_104480402	3300012096	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLALSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTNDRGAY*
Ga0137388_112308952	3300012189	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPLRRTSDRGAY*
Ga0137365_106213341	3300012201	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLAESAAERVAQEVYGASYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRTGDHQLWR*
Ga0137399_100651942	3300012203	Vadose Zone Soil	MDAQSGSRALSATNDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPLRRTSDRGAH*
Ga0150985_1073936632	3300012212	Avena Fatua Rhizosphere	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAYEHPELIARDLPRLRRSADRLGRDIENYVSREEGATVSRGHPLRRSSDRGAH*
Ga0150984_1149699281	3300012469	Avena Fatua Rhizosphere	MDAESGSRALSAANDLVELLRLAPAAAPRAAPEVYGVAYEHAELIARDLQRLRRSAETLGHDIENYVAREEGATVRRGHPLRRSSDRGAH*
Ga0150984_1221061921	3300012469	Avena Fatua Rhizosphere	MDAESGSRALSAVSDLKELLRLAHAAAERAAQEVYGVAYERAELIASDLERLRRSAEKLGNDVKDYVSREGSAAAERGHPLRRSSDRGAH*
Ga0150984_1221549231	3300012469	Avena Fatua Rhizosphere	ASDLKELLRLAHAAAERAAQEVYGVAFERAELIASDLERLRRSAEKLGNDVKDYVSREASAAVQRGHPLRRSSDRGAH*
Ga0137398_109946941	3300012683	Vadose Zone Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSHDIENYVAREEGATVRRGHPLRSSSDRGAH*
Ga0137394_100542985	3300012922	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPMRRTSDRGAH*
Ga0137394_101521522	3300012922	Vadose Zone Soil	MDAETGSRALSAANDLVELLRLAHGASERVAQEVYGVSYEHAELITRELQRLRRSADKLQADVESYVARAEGATVERGHPLRRTSDRGAY*
Ga0137394_101659802	3300012922	Vadose Zone Soil	MDAETGSRALSATNDLVELLRLAHGAAERLAQEVYGPSFEHAELLLREIHRLRRSADKLQKDVERFVSREEGATVERGHPLRRAGDRGANA*
Ga0137404_1000002732	3300012929	Vadose Zone Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAYEHAELIARDLQRLRRSAEKLGHDIENHVSREEGATVRRGHPLRRSSDRGAH*
Ga0137410_100651432	3300012944	Vadose Zone Soil	MDAETGSRALSAANDLVELLRLAHGASERVAQEVYGVSYEHAELITRELQRLRRSADKLQADVESYVAREEGATVERGHPLRRTSDRGAY*
Ga0164303_103878911	3300012957	Soil	DSQSGSRALGAAQDLVELLRLAASAAERLAQELYGASYEHAELIERELQRLRRSADKLARDVEDYVARAEPPGSQVHPLRRGSDPH*
Ga0134081_103114931	3300014150	Grasslands Soil	NDLVEMLRLAQSAAERVAQEVYGVAYEHAELIERELQRLRRSADRMQKTVEDYVSREEGASVERGHPMRRASDHH*
Ga0167658_10942591	3300015195	Glacier Forefield Soil	MLPQMDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSNDIENYVAREEGATVQRGHPLR
Ga0137418_101265372	3300015241	Vadose Zone Soil	MDAQSGSRALSATNDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPMRRTSDRGAH*
Ga0134072_102865671	3300015357	Grasslands Soil	MDAQSSSRALGAARDLLELLRLAEAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREEGE
Ga0134085_101547002	3300015359	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLTQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR*
Ga0132258_106679722	3300015371	Arabidopsis Rhizosphere	MDAETGSRALSAARDLVELLRLAHGAAERVAQEVYGVSFEHAELIARELQRLRRSADKLTQDVGSYIAREERTTSERGHPLRRAGDRNSGQRP*
Ga0134074_10709162	3300017657	Grasslands Soil	MEAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEDYVSREEGASVERGHPMRRAGDHH
Ga0134083_104023942	3300017659	Grasslands Soil	FTRASYADPMDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADTLQKTVEDHVSREEGASVERVHPLRRTSDHH
Ga0066655_109149141	3300018431	Grasslands Soil	KRFTCANYAGPMDAQSGSRALSAVNDLVEMLRLAQSAAERVAQEVYGASYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH
Ga0137408_12504294	3300019789	Vadose Zone Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAYEHAELIARDLQRLRRSAEKLGHDIENHVSREEGATVRRGHPLRRSSDRGAH
Ga0196964_102265072	3300020202	Soil	MDKDSDSRALSAASDLNELLRLAASAAERATQETFGPTYEHAELIARDLQRLRRSADKLQRAVEAFVHSARDASERGHPLRRASDRGPHHSR
Ga0196964_103125211	3300020202	Soil	MLRSVDPDSGSRALSAVNDLNELLRLAASAAERATQETFGPAYEHAELLARELQRLRRSAEKLQREVEAFVQREESATVDRGHPLRRSSDRGSHLSR
Ga0207660_105055552	3300025917	Corn Rhizosphere	MDAQSGSRALSAASDLADLLRLAQEAVERLAQEVYGASFEHAELIARELQRLRRSADTLRRGVEEHVAREEGATVQRGHPLRRSSDRSLS
Ga0209235_12679222	3300026296	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRAGDHQLGR
Ga0209237_11202531	3300026297	Grasslands Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGVSYEHAELIGRELQRLRRSADKLQKTVEDHVSREEGASVERGHPLRRTSDHR
Ga0209027_10991531	3300026300	Grasslands Soil	MDAQSSSRALGAARDLLELLQLAQAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREQGETAARGHPLRRASDRP
Ga0209238_10345724	3300026301	Grasslands Soil	MDAQSSSRALGAARDLLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREEGETAARGHPLRRA
Ga0209471_11389262	3300026318	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGSSVERGHPLRRTSDRGAH
Ga0209647_10339073	3300026319	Grasslands Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSHDIENYVAREEGATVRRGHPLRRSSDRGAH
Ga0209131_10785073	3300026320	Grasslands Soil	MDAESGSRALSAANDLVELLRLAHAAAERAAQEVYGVAFEHAELIARDLQRLRRSADKLSHDIENYVAREEGANVRRGHPLRRSSDRGAH
Ga0209152_100685872	3300026325	Soil	MDAQSSSRALGAARDLLELLRLAEAAAERAAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVAREEGETAARGHPLRRASDRH
Ga0209157_11855942	3300026537	Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAREVYGVSYEHAELIERELQRLRRSADKLQKTVEDHVSREEGATVDRGHPLRRAGDHHLGR
Ga0209161_100687513	3300026548	Soil	MDAQSGSRALSAVNDLVEMLRLAQSAAERVAQEVYGASYEHAELIEREVQRLRRSADKLQKTVEEHVSREEGASVERGHPLRRTSDRGAH
Ga0209474_100512764	3300026550	Soil	MDAQSSSRALGAARDLLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRP
Ga0209474_100932784	3300026550	Soil	MDAQAGSRALNAANDLVEMLRLAQSAAERVAQEVYGVAYEHAELIERELQRLRRSADRMQKTVEDYVSREEGASVERGHPMRRASDHH
Ga0209474_104234152	3300026550	Soil	MDAQSGSRALGAAHDLLELLRLAASAAERLAQELYGASYEHAELIERELQRLRRGADKLAREAEEYVAREESAGGSRVHPLRRASDHP
Ga0209577_106377471	3300026552	Soil	QSSSRALGAARDLLELLHLAQAAAERVAQEVYGAAFEHAELIEREVARVRRSAEKLARDIEDYVARDQGETAARGHPLRRASDRP
Ga0209588_11741103	3300027671	Vadose Zone Soil	AANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADRLQKTVEDYVSREEGASVERGHPMRRTSDRGAH
Ga0209180_106453721	3300027846	Vadose Zone Soil	MDAQSGSRALSAANDLVEMLRLAQSAAERVAQEVYGASYEHAELIERELQRLRRSADKLQKTVEEHVSREEGASVERGHPMRRASDHH
Ga0209166_101870172	3300027857	Surface Soil	MDAESGSRALSAANDLVELLRLAHAAAERVAQEVYGVAFEHAELITRDLQRLRRSAEKLGHDIENYVSREEGATVQRGHPLRRSSDRGAH
Ga0307469_108247212	3300031720	Hardwood Forest Soil	MDAETGSRALSAANDLVELLRLAHAAAERAAQDVYGVAFEHAELIARDLQRLRRSAEKLGRDIENHVAREEGETVRRGHPLRRSSDRGAH
Ga0307469_109495211	3300031720	Hardwood Forest Soil	MLPQMDAESGSRALSAANDLVELLRLALAAAERAAQEVYGVSYEHAELIARDLQRLRRSADKLSHDIEHYVSREEGANVRRGHPLRRSSDRGAH
Ga0307416_1026230511	3300032002	Rhizosphere	LGAVNDLNELLRLAASAAERATQETFGPAYEHAELIARDLQRLRRSAEKLQRAIEAFVHREEGATVDRGHPLRRASDRGSLPR
Ga0307470_110759562	3300032174	Hardwood Forest Soil	MLPQMDAESGSRALSAANDLVELLRLALAAAERAAQEVYGVSYEHAELIARDLQRLRRSADKLSHDIEHYVAREEGANVKRGYPLRRSSDRGAH
Ga0307471_1023302292	3300032180	Hardwood Forest Soil	VRSAVSFMLAVYAAPMDAETGSRALSAANDLVELLRLAHAAAERAAQDVYGVAFEHAELIARDLQRLRRSAEKLGRDIENHVAREEGETVRRGHPLRRSSDRGAH
Ga0307472_1014408002	3300032205	Hardwood Forest Soil	MLPQMDAESGSRALSAANDLVELLRLALAAAERAAQEVYGVSYEHAELIARDLQRLRRSADKLSHDIEHYVAREEGANVQRGHPLRRSSDRGAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences