NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076424

Metagenome / Metatranscriptome Family F076424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076424
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 56 residues
Representative Sequence QASKLLRGSKPSIVMGAGEGRPGLAMNSFMLQPGEEKIVAEQLSRLLREHAA
Number of Associated Samples 111
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.85 %
% of genes near scaffold ends (potentially truncated) 98.31 %
% of genes from short scaffolds (< 2000 bps) 94.07 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (72.881 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(8.475 % of family members)
Environment Ontology (ENVO) Unclassified
(31.356 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.458 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 27.50%    β-sheet: 0.00%    Coil/Unstructured: 72.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF07690MFS_1 36.44
PF03737RraA-like 6.78
PF01522Polysacc_deac_1 3.39
PF00754F5_F8_type_C 3.39
PF00294PfkB 2.54
PF01081Aldolase 1.69
PF01979Amidohydro_1 1.69
PF02837Glyco_hydro_2_N 1.69
PF01243Putative_PNPOx 1.69
PF13594Obsolete Pfam Family 1.69
PF07969Amidohydro_3 1.69
PF00072Response_reg 0.85
PF13564DoxX_2 0.85
PF00903Glyoxalase 0.85
PF00578AhpC-TSA 0.85
PF06537DHOR 0.85
PF12900Pyridox_ox_2 0.85
PF03631Virul_fac_BrkB 0.85
PF04909Amidohydro_2 0.85
PF13364BetaGal_dom4_5 0.85
PF00933Glyco_hydro_3 0.85
PF03841SelA 0.85
PF01182Glucosamine_iso 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0684RNA degradosome component RraA (regulator of RNase E activity)Translation, ribosomal structure and biogenesis [J] 6.78
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 3.39
COG08002-keto-3-deoxy-6-phosphogluconate aldolaseCarbohydrate transport and metabolism [G] 1.69
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 1.69
COG03636-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminaseCarbohydrate transport and metabolism [G] 0.85
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.85
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 0.85
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.85
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.88 %
UnclassifiedrootN/A27.12 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002244|JGI24742J22300_10079164Not Available620Open in IMG/M
3300002245|JGIcombinedJ26739_100352600All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1352Open in IMG/M
3300002558|JGI25385J37094_10191348All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae548Open in IMG/M
3300002568|C688J35102_118267526All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae544Open in IMG/M
3300004153|Ga0063455_100372084All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300004479|Ga0062595_100291667All Organisms → cellular organisms → Bacteria → Acidobacteria1092Open in IMG/M
3300005164|Ga0066815_10041689Not Available730Open in IMG/M
3300005171|Ga0066677_10803968All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae520Open in IMG/M
3300005178|Ga0066688_10304367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1029Open in IMG/M
3300005184|Ga0066671_10761589All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300005332|Ga0066388_101308742All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300005434|Ga0070709_10921353All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005438|Ga0070701_10204963Not Available1168Open in IMG/M
3300005439|Ga0070711_100786251All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300005446|Ga0066686_10883276All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005542|Ga0070732_10116246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1582Open in IMG/M
3300005558|Ga0066698_10123569All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300005560|Ga0066670_10839425All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005614|Ga0068856_100228242All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1877Open in IMG/M
3300005616|Ga0068852_102854298All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005840|Ga0068870_10478436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae826Open in IMG/M
3300005841|Ga0068863_102090888All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia576Open in IMG/M
3300005843|Ga0068860_101294566All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae750Open in IMG/M
3300005843|Ga0068860_101771305All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae639Open in IMG/M
3300005921|Ga0070766_11227306All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae519Open in IMG/M
3300005993|Ga0080027_10014033All Organisms → cellular organisms → Bacteria2856Open in IMG/M
3300006050|Ga0075028_100925892All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae538Open in IMG/M
3300006173|Ga0070716_100476903All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300006354|Ga0075021_10438863All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae822Open in IMG/M
3300006797|Ga0066659_11187924All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006881|Ga0068865_100580033All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia945Open in IMG/M
3300006904|Ga0075424_100203088All Organisms → cellular organisms → Bacteria2105Open in IMG/M
3300009011|Ga0105251_10249790Not Available799Open in IMG/M
3300009012|Ga0066710_102027310Not Available851Open in IMG/M
3300009101|Ga0105247_10334812All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300009176|Ga0105242_12495171All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300009177|Ga0105248_10338350All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1694Open in IMG/M
3300009665|Ga0116135_1476229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300010048|Ga0126373_10769944All Organisms → cellular organisms → Bacteria → Acidobacteria1023Open in IMG/M
3300010304|Ga0134088_10117526Not Available1257Open in IMG/M
3300010335|Ga0134063_10180203Not Available989Open in IMG/M
3300010360|Ga0126372_10906007All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300010364|Ga0134066_10148801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300010371|Ga0134125_12030753All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012199|Ga0137383_10918366All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300012208|Ga0137376_10734445All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300012208|Ga0137376_11582166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300012210|Ga0137378_11869225All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300012212|Ga0150985_108905885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7681Open in IMG/M
3300012361|Ga0137360_10266824All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1411Open in IMG/M
3300012363|Ga0137390_11000851Not Available788Open in IMG/M
3300012469|Ga0150984_121410829All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300012922|Ga0137394_10910514All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300012957|Ga0164303_10805233All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300012960|Ga0164301_10892616All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300012975|Ga0134110_10075194All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_111347Open in IMG/M
3300012976|Ga0134076_10389148Not Available619Open in IMG/M
3300012989|Ga0164305_11632199Not Available576Open in IMG/M
3300013105|Ga0157369_10430410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1368Open in IMG/M
3300013308|Ga0157375_11112342All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300013770|Ga0120123_1031596All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300014969|Ga0157376_10209363All Organisms → cellular organisms → Bacteria1799Open in IMG/M
3300015054|Ga0137420_1269257All Organisms → cellular organisms → Bacteria1987Open in IMG/M
3300015374|Ga0132255_101446277All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300017656|Ga0134112_10014317All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2659Open in IMG/M
3300017933|Ga0187801_10101653Not Available1092Open in IMG/M
3300017940|Ga0187853_10295511Not Available733Open in IMG/M
3300017973|Ga0187780_11261077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300017975|Ga0187782_10250012Not Available1332Open in IMG/M
3300018006|Ga0187804_10511930Not Available540Open in IMG/M
3300018021|Ga0187882_1330172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300018042|Ga0187871_10525842All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300018090|Ga0187770_10347146Not Available1160Open in IMG/M
3300018090|Ga0187770_10427493Not Available1043Open in IMG/M
3300018431|Ga0066655_11185976Not Available540Open in IMG/M
3300018468|Ga0066662_12023723All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300021171|Ga0210405_10440242Not Available1025Open in IMG/M
3300021432|Ga0210384_11116889All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae692Open in IMG/M
3300021477|Ga0210398_11556714All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300023019|Ga0224560_103652All Organisms → cellular organisms → Bacteria → Acidobacteria994Open in IMG/M
3300025612|Ga0208691_1014667All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1907Open in IMG/M
3300025911|Ga0207654_10383795All Organisms → cellular organisms → Bacteria → Acidobacteria973Open in IMG/M
3300025911|Ga0207654_11144674All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300025914|Ga0207671_10478293All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300025922|Ga0207646_10447376Not Available1166Open in IMG/M
3300025981|Ga0207640_11129840All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300026041|Ga0207639_10906219All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300026305|Ga0209688_1035812All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium949Open in IMG/M
3300026354|Ga0257180_1022218Not Available830Open in IMG/M
3300026514|Ga0257168_1012028All Organisms → cellular organisms → Bacteria → Acidobacteria1672Open in IMG/M
3300026530|Ga0209807_1183166Not Available761Open in IMG/M
3300026542|Ga0209805_1282678All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300026548|Ga0209161_10494988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300027181|Ga0208997_1076472Not Available501Open in IMG/M
3300027681|Ga0208991_1083842All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae958Open in IMG/M
3300027738|Ga0208989_10013181Not Available2830Open in IMG/M
3300027825|Ga0209039_10288047Not Available649Open in IMG/M
3300027842|Ga0209580_10069038Not Available1676Open in IMG/M
3300027862|Ga0209701_10073367All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2164Open in IMG/M
3300027889|Ga0209380_10715820All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300027908|Ga0209006_11441637Not Available524Open in IMG/M
3300028536|Ga0137415_10084408All Organisms → cellular organisms → Bacteria3033Open in IMG/M
3300028673|Ga0257175_1006053All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1674Open in IMG/M
3300031090|Ga0265760_10366853All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300031720|Ga0307469_11017923Not Available774Open in IMG/M
3300031720|Ga0307469_11253304Not Available703Open in IMG/M
3300031820|Ga0307473_10788464All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300031823|Ga0307478_10390777Not Available1151Open in IMG/M
3300031996|Ga0308176_12562609All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300032160|Ga0311301_12539524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300032205|Ga0307472_101826922All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300032421|Ga0310812_10035707All Organisms → cellular organisms → Bacteria1848Open in IMG/M
3300032783|Ga0335079_10099941Not Available3289Open in IMG/M
3300032783|Ga0335079_10644242All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300032783|Ga0335079_11816522All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300033004|Ga0335084_11920230Not Available578Open in IMG/M
3300033412|Ga0310810_10739304All Organisms → cellular organisms → Bacteria → Acidobacteria904Open in IMG/M
3300033433|Ga0326726_11811425Not Available594Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.08%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.24%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.24%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.24%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.39%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.39%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.39%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.39%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.54%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.69%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.69%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.85%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002244Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1Host-AssociatedOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300023019Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24742J22300_1007916413300002244Corn, Switchgrass And Miscanthus RhizosphereSKLLRESKPSIVLTSGEERPGLSMNSFMLQAGEYKIVADQLVKILRAHSA*
JGIcombinedJ26739_10035260023300002245Forest SoilLEPRQVSELLRNSKPAIVIGGGQGRLGLTMCSFMLRLGEDTIVAEQLSRILREQSA*
JGI25385J37094_1019134813300002558Grasslands SoilDASKILRSSKPSIVIGGGEGKPGLAMNSFMLQPGEEKIVAEQLVKLFKAHSA*
C688J35102_11826752623300002568SoilPHMQITWDEAKISLTPKQVSQLLKESKPSIIMTAGEEKPGLSMNSFMLQAGEHKVVGEQLTRILREHIA*
Ga0063455_10037208423300004153SoilMSITWDSRVSISPQEVSRLLRSGQPSIVIGGGEGRPGLGISSFMLQSGEDQIIADHLSKVLREHSA*
Ga0062595_10029166713300004479SoilKEVSKLLADSTPSIIMGGGEGRPGLAMNSFMLQPGENKIVAEQLTRILRGSAKGGR*
Ga0066815_1004168913300005164SoilISLTPQEVSKLLRESKPSIVLTSGEERPGLSMNSFMLQAGEYKIVADQLVKILRAHSA*
Ga0066677_1080396823300005171SoilKEVAQLLSDSNASIVMGGGEERPGLVMNSFMLQPGENKIVAEQLTRIFREHSANGK*
Ga0066688_1030436713300005178SoilQILRSSNPSIVMGGGEGRPGLAMNSFMLQPGEEQIVAEQLVSIFRAHSA*
Ga0066671_1076158923300005184SoilQITWDSKVSIEPKQVSQMLRNSKPSIVMGGGEGRPGLAMCSFMLQPGEEMMVAQQLSRILREHSA*
Ga0066388_10130874223300005332Tropical Forest SoilDAKISLTPQQASQILRAGNPSIAIGGGEGRPGLSMNSFMLQPGEEQIVAEQLVKVFRDHSA*
Ga0070709_1092135323300005434Corn, Switchgrass And Miscanthus RhizosphereAKVSLTAQQASQILRAGTPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQMVKLFRKNLA
Ga0070701_1020496313300005438Corn, Switchgrass And Miscanthus RhizosphereRESKPSIVLTSGEERPGLSMNSFMLQAGEYKIVADQLVKILRAHSA*
Ga0070711_10078625113300005439Corn, Switchgrass And Miscanthus RhizosphereTPQQASHMLRAGQPSIAIGGGEGRPGLSMCSFMLQPGEEQIIADQLTKLFREHSA*
Ga0066686_1088327623300005446SoilGHINLTAPDASKVLRSGKPSIVMGGGEGKPGLAMNSFMLQSGEDKIVAAQLVKLFKEHSA
Ga0070732_1011624623300005542Surface SoilRSGSPSIAIGGGEVKPGLAMSSFMLQPGEEQIIAEQLVKLFREHSA*
Ga0066698_1012356913300005558SoilTVKEASQQLRESKPSIVIGGGEGKPGLSMNSFMLQTGEHRIVAARLVRLFREHAA*
Ga0066670_1083942513300005560SoilAQQASQILRAGTPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQMVKLFRKNLA*
Ga0068856_10022824223300005614Corn RhizosphereSQILRSGSPSIAIGGGEGRPGLAMNSFMLQQGEENIVAEQLVKLFRERSA*
Ga0068852_10285429813300005616Corn RhizosphereMQITWDRKISLTPSQATQILRNGSPSIAVGGGEGRPGLMICSFMLQPGEEHIVADQLAKLFRDHSG*
Ga0068870_1047843623300005840Miscanthus RhizosphereTQILRNGSPPIAVGGGEGRPGLAINSFMLQPGEERIVGDQLVKLFRDHAG*
Ga0068863_10209088823300005841Switchgrass RhizosphereSARIALTTAEVAKLLLESSPSIVIGSGEDRPGLVMNSFMLQPGENEIVAGQLTRIFREHSAGAK*
Ga0068860_10129456613300005843Switchgrass RhizosphereKESKPSIIMAAGEEKPGLSMNSFMLQAGEDKVVAEQLARILRERTA*
Ga0068860_10177130513300005843Switchgrass RhizospherePKEASQLLRDSNPSIVMGGGEERPGLAMCSFMLQPGENKIVAQQLTKIFREHSTK*
Ga0070766_1122730613300005921SoilSKLLRSSTPSIVIGSGEEQPGLSMNSFMLQPGEDKLVAARLSQFLREHAA*
Ga0080027_1001403343300005993Prmafrost SoilSKAMRSAKPAIVIGGGEERPGLNMNSFMLQAGEEKIVAEQLSKILREHSA*
Ga0075028_10092589213300006050WatershedsSKALRGSKPSIVIGGGEERPGLNMSSFMLQVGEDKIVAEQLSKILREHSA*
Ga0070716_10047690323300006173Corn, Switchgrass And Miscanthus RhizosphereISLTPKQASQLLRGGQPAVVIGGSEERPGLAMNSFMLQSGEDQIIAEQLVKVLRAHSA*
Ga0075021_1043886323300006354WatershedsLRNSKPSIVIGGGEGRPGLAMCSFMLQPGEEKTVAEQLSRVLREHSA*
Ga0066659_1118792413300006797SoilKIALTPQQASQILRSSNPSIVMSGGEGRPGLAMNSFMLQPGEEQIVAEQLVSIFRAHSA*
Ga0068865_10058003313300006881Miscanthus RhizosphereVPVSQQEVSKALKESQPSIVLGGGENRPGLVMCSFMLQPGEHKIVAEKLAGVLRQHATA*
Ga0075424_10020308813300006904Populus RhizosphereKIRVTPQQVSETLRKGSPSIAIGGGEGHPGLAMCSFMLQPGEEQIIAEQLVRVLQGHSA*
Ga0105251_1024979013300009011Switchgrass RhizosphereAKISLTPQEVSKLLRESKPSIVLTSGEERPGLSMNSFMLQAGEYKIVADQLVKILRAHSA
Ga0066710_10202731013300009012Grasslands SoilAAKWLRNAKPPIAIGSGEGRPGLAMNSFMLQPGEDKIVAEQLAKLFREHSA
Ga0105247_1033481223300009101Switchgrass RhizosphereLTPKQVSQLLKESKPSIIMAAGEEKPGLSMNSFMLQAGEDKVVAEQLARILREHTA*
Ga0105242_1249517113300009176Miscanthus RhizosphereKISLTPKQVSQLLKESKPSIIMAAGEEKPGLSMNSFMLQAGEDKVLAEQLARILREHTA*
Ga0105248_1033835013300009177Switchgrass RhizosphereQLLKESKPSIIMAAGEEKPGLSMNSFMLQAGEDKVVAEQLARILREHTA*
Ga0116135_147622923300009665PeatlandRISLTPDQASKLLRGSKPSIVMGAGEGRPGLAMNSFMLQPGEEKIVAEQLSRLLREHAA*
Ga0126373_1076994423300010048Tropical Forest SoilWDSRISLTPKQVAQMLRSSSPSIVMSVGEERPGLSMNSFMLQPGEEQIIADELAKLLREHAA*
Ga0134088_1011752613300010304Grasslands SoilGHIPLTVKEASQQLRESKPSIVIGGGEGKPGLSMNSFMLQPGEHRTVAARLVRLFREHAA
Ga0134063_1018020313300010335Grasslands SoilPLTVKEASQQLRESKPSIVIGGGEGKPGLSMNSFMLQTGEHRIVAARLVRLFREHAA*
Ga0126372_1090600723300010360Tropical Forest SoilALTPQQASQILRAGQTSIAIGGGEGRPGLSMCSFMLQPGEEQIIADQLTKLFREHSA*
Ga0134066_1014880123300010364Grasslands SoilTKVSLTAQQASQILRAGTPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQMVKLFRGNLA
Ga0134125_1203075323300010371Terrestrial SoilILRSGSPSIAVGGGEGRPGLMICSFMLQPGEEHMVADQLTKLFREHSA*
Ga0137383_1091836623300012199Vadose Zone SoilMQVTWDAKIALTAQQASQILRAGQPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQLIKVFREHLS*
Ga0137376_1073444513300012208Vadose Zone SoilVSISPQEVSRMLRSGQPSIVIGGGEGRPGLGMNSFMLQPGEDQIIADHLSKVLREHSA*
Ga0137376_1158216613300012208Vadose Zone SoilRIALTTKEVSKLLADSTPSIIMGGGEGRPGLAMNSFMLQPGENKIVAEQLTRIFRGHSAGGK*
Ga0137378_1186922513300012210Vadose Zone SoilILRSSNPSIVMGGGEIRPGLAMNSFMLQPGEEQIVAEQLVNVFHAHSV*
Ga0150985_10890588523300012212Avena Fatua RhizosphereWDQRISLTPKQASQLLRSGQPSVVIGGGEERPGLAMNSFMLQPGEDQIVAEQLVKVLRAHSA*
Ga0137360_1026682433300012361Vadose Zone SoilEQGSKWLRSSKPSIVMGAGEGRPGLAMNSFMLQAGEDKIVAGQLSRLMREHTV*
Ga0137390_1100085123300012363Vadose Zone SoilDSNISLTPEQVSKRLRDSKPAIVIGVGEGRPGLTMNSFMLQSGEDKIVAEQLSRILREHSA*
Ga0150984_12141082933300012469Avena Fatua RhizosphereWDMKVSLTAQQASQILRAGTPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQMVKLFRGNLA*
Ga0137394_1091051423300012922Vadose Zone SoilVSAMLKDSKPSIAMSPGEERPGLAMNSFMLQEGEHRIVAERLARTFREHSSAKSLGA*
Ga0164303_1080523313300012957SoilAKISLTPQQASYMLRAGQPSIAIGGGEGRPGLSMCSFMLQPGEEQIIADQLTKLFREHSA
Ga0164301_1089261613300012960SoilSATPQQVSKTLRSAKPSIVIGGGEGRPGLTMCSFMLQPGEEKIVAEQLSSVLRQHTA*
Ga0134110_1007519413300012975Grasslands SoilSPQEVSRMLRSGQPSIVIGGGEGRPGLGMNSFMLQPGEDQIIADHLSKVLREHSA*
Ga0134076_1038914823300012976Grasslands SoilVKEASQQLRESKPSIVIGGGEGKPGLSMNSFMLQTGEHRIVAARLVRLFREHAA*
Ga0164305_1163219913300012989SoilQLLRESKPAILMGAGEDRPGLAMNSFMLQPGEDRIVADHLARIFREHSA*
Ga0157369_1043041023300013105Corn RhizosphereAQASQILRSGSPSIAIGGGEGRPGLAMNSFMLQPGEENIVAEQLVKLFRERSA*
Ga0157375_1111234213300013308Miscanthus RhizosphereKQVSQLLKESKPSIIMAAGEEKPGLSMNSFMLQAGEDKVVAEQLARILREHTA*
Ga0120123_103159623300013770PermafrostILRAGQPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQLVKVFREHSS*
Ga0157376_1020936313300014969Miscanthus RhizosphereITWNAAAIALTPKQASQFLRESKPAILMGAGEDRPGLAMNSFMLQPGEDRIVADHLARIFREHSA*
Ga0137420_126925713300015054Vadose Zone SoilSSKPAIVIAAGEDREDRPGLVMNSFMLQPGEDEVVARQLAQIFRQHAT*
Ga0132255_10144627713300015374Arabidopsis RhizosphereRQVAQALRDSKPSIVIGGGEGRPGLAMSSFMLQPGEHETVARQLAQILRQHAT*
Ga0134112_1001431713300017656Grasslands SoilTWDEGHIPLTVKDASQQLRESKTSIVIGGGEGKPGLSMNSFMLQPGEHRTVAARLVRLFREHAA
Ga0187801_1010165323300017933Freshwater SedimentSLSREQVSKLLRNSKPAMVIAVGEDRPGLVMNSFMLQPGEDKVVAELLSRVLREHSA
Ga0187853_1029551113300017940PeatlandQASKLLRGSKPSIVMGAGEGRPGLAMNSFMLQPGEEKIVAEQLSRLLREHAA
Ga0187780_1126107723300017973Tropical PeatlandWDARIPLTPQQVAQSLRNSRPAIVIGGGEGKPGLTMNSFMLQPDEDQAVADRLAHILRDHSA
Ga0187782_1025001213300017975Tropical PeatlandVTWDSRISLTPAQISKLMRTSKPAIVVATGEDRPGLVMNSFQLQPGEDEIVAVELSRVLREHSA
Ga0187804_1051193013300018006Freshwater SedimentEQVSKALRSSKPAMVIAVGEDRPGLVMNSFMLQPGEDKVVAELLSRVLREHSA
Ga0187882_133017223300018021PeatlandEQASKLLRGSKPSIVMGAGEGRPGLAMNSFMLQPGEEKIVAEQLSRLLREHAA
Ga0187871_1052584213300018042PeatlandKLLRSSKPSIVISSGEGQPGLSMNSFMLQPGEHKIVAAQLSQLMREHSA
Ga0187770_1034714623300018090Tropical PeatlandIQWDARIPLSPAQVSKLLRSSNPAIVIAVGEDRPWLVMNSFMLQPGEARIVAEQLSRVLREHSA
Ga0187770_1042749323300018090Tropical PeatlandWDSHIAVTPAEVSRLLRNSKPAMVIAAGEDRPGLVMNSFQLQEGEEKIVAMQLSRVLREHSV
Ga0066655_1118597623300018431Grasslands SoilPEQVSKLLRTSKPAIVLSPAEDRPGLAMNSFMLQPGENKIVAQQVARILREHSA
Ga0066662_1202372313300018468Grasslands SoilIEPKQVSQMLRNSKPSIVMGGGEGRPGLAMCSFMLQPGEEMMVAQQLSRILREHSA
Ga0210405_1044024223300021171SoilAQLLRNSKPSVVIASGEDRPGLVMNSFMLQPGEEEIVASRLLQVFREHAA
Ga0210384_1111688913300021432SoilAVSQMLKDSNPSIAMSPGEERPGLAMNSFMLQPGENKIVAERLTRIFREHSADGKTGGK
Ga0210398_1155671423300021477SoilAARISLTPQQASKLLRNSKPAIVIGTGEDRPGLAMNSFMLQTGEDKIVADQLSRLLREHA
Ga0224560_10365213300023019SoilEQASKMLRSSNPSIVIGTGEGHAGLVMNSFMLQPGENRIVAEQLSQLFRQHTA
Ga0208691_101466713300025612PeatlandLTPEQAAKLLRSSKPSIVISSGEGQPGLSMNSFMLQPGEHKIVAAQLSQLMREHSA
Ga0207654_1038379513300025911Corn RhizosphereSQATQILRNGSPSIAVGGGEGRPGLMICSFMLQPGEEHIVADQLAKLFRDHSG
Ga0207654_1114467413300025911Corn RhizosphereILRSGSPSIAIGGGQGRPGLAMNSFMLQPGEENIVAEQLVKLFREHAA
Ga0207671_1047829323300025914Corn RhizosphereSKPSIIMAAGEEKPGLSMNSFMLQAGEDKVVAEQLARILREHTA
Ga0207646_1044737623300025922Corn, Switchgrass And Miscanthus RhizospherePQEASKWLRNAKPPIVIGSGEGRPGLAMNSFMLQPREDKIVAQQLMKLFREHLA
Ga0207640_1112984013300025981Corn RhizosphereQATQILRNGSPSIAVGGGEGRPGLMICSFMLQPGEEHIVADQLAKLFRDHSG
Ga0207639_1090621923300026041Corn RhizospherePQATQILRNGSPPIAVGGGEGRPGLAINSFMLQPGEERIVGEQLVKLFRDHAG
Ga0209688_103581213300026305SoilLTAPDASKVLRSGKPSIVMGGGEGKPGLAMNSFMLQPGEEKIVAEQLVKLFKAHSA
Ga0257180_102221813300026354SoilRIALSPKEVSKLLEDSTPSIVMGVGEERPGLSMNSFMLQPGENKIVAEQLMRIFRGHSAAGK
Ga0257168_101202833300026514SoilASKLLRGSKPSIAIGEGEGRPGLAMNSFMLQPGEDRIVAEQLSRILREHVA
Ga0209807_118316613300026530SoilSPKEVSQLLRNSNPSIVMGAGEDRPGLVMNSFMLQPDESKIVTERLTQIFREHSAK
Ga0209805_128267813300026542SoilDASKMLRSGKPSIVMGGGEGKPGLTMNSFMLQPGEDKTVAEQLVKLFKAHSA
Ga0209161_1049498813300026548SoilQASQILRSSNPSIVMGGGEGGPGLAMNSFMLQPGEEQIVAEQLVSIFRAHSA
Ga0208997_107647223300027181Forest SoilVSKQLRDSKPAIVIGVGEGRPGLTMNSFMLQSGEDKIVAEQLSRILREHSA
Ga0208991_108384223300027681Forest SoilMQIAWDSRVSLEPRQVSQLLGNSKPAIVIGGGQGRLGLTMCSFMLRLGEDTIVAEQLSRILREQSA
Ga0208989_1001318113300027738Forest SoilISLTPEQVSKQLRDSKPAIVIGVGEGRPGLTMNSFMLQSGEDKIVAEQLSRILREHSA
Ga0209039_1028804713300027825Bog Forest SoilAARISLTPEQASKLLRSGKPSIVIGGGEGRPGLSMNSFMLQPGEDRIVAEQLSRLLREHA
Ga0209580_1006903813300027842Surface SoilITWDPKLALTPQQASQILRSETPSIAIGGGEGRPGLAMSSFMLQPGEEQIIAEQLVRLFREHSA
Ga0209701_1007336713300027862Vadose Zone SoilDANRIALSPKEVSKLLEDSTPSIVMGVGEERPGLSMNSFMLQPGENKIVAEQLMRIFRGHSAAGK
Ga0209380_1071582023300027889SoilDEAHIALTPEQASKLLRSSTPSIVIGSGEEQPGLSMNSFMLQPGEDKLVAARLSQFLREHAA
Ga0209006_1144163723300027908Forest SoilISLTPQQASGLLRSSKPSIVIGAGEGRPGLAMNSFMLQPGEHKIVAEQLSRVLRDHAA
Ga0137415_1008440813300028536Vadose Zone SoilQMLKDSKPSIVISVGEDQPGLGVNSFMLQPGEDKIVANQLARVLREHSTGT
Ga0257175_100605313300028673SoilALTPAEVSRRLRDSSPSIVMAAGEERPGLVMNSFMLQPGENRIVAERLTRILGEHSAS
Ga0265760_1036685323300031090SoilQQVSQLLRNSKPSIVMSAGEEKPGLAMNSFMLQPGEDQIVAEHLSRILRQRSA
Ga0307469_1101792323300031720Hardwood Forest SoilAKISLTPQQAAQLLRESKPAIVIAPGEDRPGLVMNSFMLQPGEDRIVAAQLVRVFRAHSA
Ga0307469_1125330413300031720Hardwood Forest SoilAAKWLRSVKPPIAIGSGEGRPGLAMNSFMLQPGEDKIVAEQLVKLFREHSA
Ga0307473_1078846423300031820Hardwood Forest SoilKISATPQQVSKTLRSAKPSIVIGGGEGRPGLTMCSFMLQPGEEKIVAEQLSSVLRQHKA
Ga0307478_1039077713300031823Hardwood Forest SoilLTPADASKLLRSAKPSIVIGSGEGRAGLVMTSFMLQPGEETVVATALSRLLRAHSA
Ga0308176_1256260913300031996SoilISLTQAQASQVLRSGSPSIAIGGGEGRPGLAMNSFMLQPGEENIVAEQLARLFREHAA
Ga0311301_1253952413300032160Peatlands SoilSKSLRNSKPAIVIGGGEGRSGLTMCSFMLQPGEDGIVAEHLSRILREHSA
Ga0307472_10182692223300032205Hardwood Forest SoilPQQVSKTLRTSKPAIVIGGGEGKPGLTMCSFMLQAGEEKIVAEQLANVLRQHTA
Ga0310812_1003570723300032421SoilWDAKISLTPQQASHMLRAGQPSIAIGGGEGRPGLSMCSFMLQPGEEQIIADQLTKLFREHSA
Ga0335079_1009994113300032783SoilQLLRDSNPSIVIGGGEGKPGLAMNSFMLQLGEEQIIADRLTTIFREHAG
Ga0335079_1064424213300032783SoilSRIPLTPQQAAKALRSSKPAIAIGAGEGKPGLAMNSFMLQPGEDRIVAEQLSRILRGQSA
Ga0335079_1181652223300032783SoilASQLLRKTTPSIVMGSGEDHSGLAMNSFMLQPGENKIVAQQLSRILRENKA
Ga0335084_1192023023300033004SoilVSKALRNSKPSIVIGGGEGKPGLGMCSFMLQQGEDKIVAERLSRILREHSA
Ga0310810_1073930423300033412SoilQEVSHRLRSGQPSIVIGGGEGRPGLGMNSFMLQPGEEQIIADQLTKVLREHSA
Ga0326726_1181142523300033433Peat SoilPQQVSKLLLESKPSIVMASGEERPGLSMNSFMLQPGENKIVAIQLVKIFRDHAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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