Metagenome Family F076560

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076560
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	66 residues
Representative Sequence	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELAAKFERARSRLR
Number of Associated Samples	96
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.71 %
% of genes near scaffold ends (potentially truncated)	27.97 %
% of genes from short scaffolds (< 2000 bps)	91.53 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.881 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (47.458 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.932 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.92224
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.91776
a.25.1.1: Ferritin	d1nfva_	1nfv	0.90588
a.25.1.2: Ribonucleotide reductase-like	d6vk6a_	6vk6	0.88785
a.25.1.1: Ferritin	d3t9ja_	3t9j	0.88708

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00072	Response_reg	11.02
PF13602	ADH_zinc_N_2	7.63
PF02586	SRAP	6.78
PF01161	PBP	6.78
PF09351	DUF1993	5.93
PF00795	CN_hydrolase	5.08
PF05167	DUF711	3.39
PF03466	LysR_substrate	3.39
PF01431	Peptidase_M13	1.69
PF03965	Penicillinase_R	1.69
PF00891	Methyltransf_2	0.85
PF13011	LZ_Tnp_IS481	0.85
PF02720	DUF222	0.85
PF01381	HTH_3	0.85
PF01904	DUF72	0.85
PF00593	TonB_dep_Rec	0.85
PF07769	PsiF_repeat	0.85
PF00069	Pkinase	0.85
PF16841	CBM60	0.85
PF09347	DUF1989	0.85
PF08378	NERD	0.85
PF13540	RCC1_2	0.85
PF00561	Abhydrolase_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	6.78
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	6.78
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.39
COG2848	Uncharacterized conserved protein, UPF0210 family	Cell cycle control, cell division, chromosome partitioning [D]	3.39
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.69
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	1.69
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.69
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.88 %
Unclassified	root	N/A	27.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.88 %
Unclassified	root	N/A	27.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.88 %
Unclassified	root	N/A	27.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.75 %
Unclassified	root	N/A	27.12 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	9.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.85 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.85 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.85 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.85 %
unclassified Alteromonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.85 %
Alteromonadaceae bacterium Bs31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium Bs31	0.85 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.85 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.85 %
Alteromonadaceae bacterium Bs31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium Bs31	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	9.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.69 %
Flavobacterium hydatis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium hydatis	0.85 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.85 %
Alteromonadaceae bacterium Bs31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium Bs31	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003321\|soilH1_10133683	Not Available	1051	Open in IMG/M
3300003322\|rootL2_10165156	All Organisms → cellular organisms → Bacteria → Proteobacteria	3836	Open in IMG/M
3300004480\|Ga0062592_100590777	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300004480\|Ga0062592_101514904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	644	Open in IMG/M
3300005327\|Ga0070658_10867847	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005330\|Ga0070690_100028834	All Organisms → cellular organisms → Bacteria	3440	Open in IMG/M
3300005334\|Ga0068869_100374165	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005334\|Ga0068869_102157794	Not Available	501	Open in IMG/M
3300005337\|Ga0070682_100484271	Not Available	955	Open in IMG/M
3300005344\|Ga0070661_101079936	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	668	Open in IMG/M
3300005347\|Ga0070668_100210390	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300005355\|Ga0070671_100059870	All Organisms → cellular organisms → Bacteria → Proteobacteria	3170	Open in IMG/M
3300005366\|Ga0070659_100437220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1108	Open in IMG/M
3300005437\|Ga0070710_10206783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300005455\|Ga0070663_101705230	Not Available	563	Open in IMG/M
3300005457\|Ga0070662_100127589	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300005457\|Ga0070662_100653987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	887	Open in IMG/M
3300005543\|Ga0070672_100785991	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005544\|Ga0070686_100022514	All Organisms → cellular organisms → Bacteria → Proteobacteria	3754	Open in IMG/M
3300005544\|Ga0070686_100972578	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005549\|Ga0070704_100977787	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005564\|Ga0070664_100874633	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005564\|Ga0070664_101186574	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300005578\|Ga0068854_100629592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300005617\|Ga0068859_100689823	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005719\|Ga0068861_100780873	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005764\|Ga0066903_103124723	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300005840\|Ga0068870_11423549	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300005844\|Ga0068862_100068168	All Organisms → cellular organisms → Bacteria → Proteobacteria	3069	Open in IMG/M
3300005844\|Ga0068862_100173404	Not Available	1932	Open in IMG/M
3300005937\|Ga0081455_10003042	All Organisms → cellular organisms → Bacteria	19535	Open in IMG/M
3300005983\|Ga0081540_1106855	Not Available	1192	Open in IMG/M
3300006163\|Ga0070715_10183135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1052	Open in IMG/M
3300006163\|Ga0070715_10854104	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006237\|Ga0097621_100233725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1605	Open in IMG/M
3300006358\|Ga0068871_100656861	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	958	Open in IMG/M
3300006358\|Ga0068871_101857584	Not Available	572	Open in IMG/M
3300006755\|Ga0079222_10283233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1069	Open in IMG/M
3300006755\|Ga0079222_10434501	All Organisms → cellular organisms → Bacteria → Proteobacteria	931	Open in IMG/M
3300006894\|Ga0079215_10195366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1018	Open in IMG/M
3300006954\|Ga0079219_11637843	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300009148\|Ga0105243_11243980	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium hydatis	759	Open in IMG/M
3300009177\|Ga0105248_11219192	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	851	Open in IMG/M
3300009177\|Ga0105248_11750837	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009551\|Ga0105238_12157096	Not Available	592	Open in IMG/M
3300010047\|Ga0126382_12400802	Not Available	512	Open in IMG/M
3300010375\|Ga0105239_11108955	Not Available	911	Open in IMG/M
3300010400\|Ga0134122_10157727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1850	Open in IMG/M
3300010401\|Ga0134121_11251842	Not Available	745	Open in IMG/M
3300010401\|Ga0134121_11825603	Not Available	635	Open in IMG/M
3300012212\|Ga0150985_120724913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	733	Open in IMG/M
3300012469\|Ga0150984_100030974	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012903\|Ga0157289_10075970	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300012903\|Ga0157289_10254056	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300012905\|Ga0157296_10185863	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012943\|Ga0164241_10004316	All Organisms → cellular organisms → Bacteria → Proteobacteria	13846	Open in IMG/M
3300012958\|Ga0164299_11707596	Not Available	500	Open in IMG/M
3300012971\|Ga0126369_13479998	Not Available	516	Open in IMG/M
3300012987\|Ga0164307_11420046	Not Available	585	Open in IMG/M
3300014325\|Ga0163163_10871879	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300014325\|Ga0163163_11403385	Not Available	760	Open in IMG/M
3300014968\|Ga0157379_11157184	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	743	Open in IMG/M
3300014969\|Ga0157376_10536253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → unclassified Alteromonadaceae → Alteromonadaceae bacterium Bs31	1156	Open in IMG/M
3300017792\|Ga0163161_11677916	Not Available	562	Open in IMG/M
3300018476\|Ga0190274_10069708	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300018476\|Ga0190274_10449908	Not Available	1269	Open in IMG/M
3300019361\|Ga0173482_10022020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300019361\|Ga0173482_10166842	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300019362\|Ga0173479_10593611	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	578	Open in IMG/M
3300019377\|Ga0190264_10614176	Not Available	779	Open in IMG/M
3300021445\|Ga0182009_10268376	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	852	Open in IMG/M
3300022886\|Ga0247746_1098992	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300023169\|Ga0247762_1146695	Not Available	659	Open in IMG/M
3300023265\|Ga0247780_1206664	Not Available	533	Open in IMG/M
3300023268\|Ga0247765_1073877	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	711	Open in IMG/M
3300024055\|Ga0247794_10099378	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300025905\|Ga0207685_10409548	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300025908\|Ga0207643_10310923	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300025909\|Ga0207705_10901466	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300025918\|Ga0207662_11356516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300025925\|Ga0207650_10723568	Not Available	841	Open in IMG/M
3300025926\|Ga0207659_10180133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1674	Open in IMG/M
3300025930\|Ga0207701_10279738	All Organisms → cellular organisms → Bacteria → Proteobacteria	1452	Open in IMG/M
3300025932\|Ga0207690_10205774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1497	Open in IMG/M
3300025932\|Ga0207690_11577077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300025941\|Ga0207711_10561682	Not Available	1065	Open in IMG/M
3300025942\|Ga0207689_10948804	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300025944\|Ga0207661_10994361	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025981\|Ga0207640_11738151	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300025986\|Ga0207658_10469480	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1117	Open in IMG/M
3300026041\|Ga0207639_10507017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300026118\|Ga0207675_100684366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300026118\|Ga0207675_100718094	Not Available	1009	Open in IMG/M
3300027787\|Ga0209074_10504663	Not Available	526	Open in IMG/M
3300028381\|Ga0268264_10276504	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300028705\|Ga0307276_10088775	Not Available	735	Open in IMG/M
3300028754\|Ga0307297_10231764	Not Available	653	Open in IMG/M
3300031507\|Ga0307509_10486311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	921	Open in IMG/M
3300031548\|Ga0307408_100203536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1604	Open in IMG/M
3300031548\|Ga0307408_100493582	Not Available	1070	Open in IMG/M
3300031548\|Ga0307408_101793126	Not Available	586	Open in IMG/M
3300031716\|Ga0310813_10609585	Not Available	967	Open in IMG/M
3300031731\|Ga0307405_10208322	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300031740\|Ga0307468_102403847	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300031903\|Ga0307407_10904262	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	677	Open in IMG/M
3300031938\|Ga0308175_100739522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300032005\|Ga0307411_11382232	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	644	Open in IMG/M
3300032074\|Ga0308173_11228658	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300032074\|Ga0308173_11919546	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300032075\|Ga0310890_11252603	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300032122\|Ga0310895_10040852	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300032126\|Ga0307415_100336510	Not Available	1265	Open in IMG/M
3300032126\|Ga0307415_100344992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1251	Open in IMG/M
3300032144\|Ga0315910_10069336	All Organisms → cellular organisms → Bacteria → Proteobacteria	2567	Open in IMG/M
3300032144\|Ga0315910_10749905	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300032205\|Ga0307472_100258141	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300032896\|Ga0335075_10117500	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300034358\|Ga0370485_0009635	Not Available	1989	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.85%
Environmental	Environmental	49.15%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.85%
Terrestrial	Environmental → Terrestrial	49.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.10%
Roots	Host-Associated → Plants → Roots	5.08%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.54%
Rhizome	Host-Associated → Plants → Rhizome	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.56%
Loam	Environmental → Terrestrial → Soil → Loam	10.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.24%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.24%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.24%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.85%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH1_101336832	3300003321	Sugarcane Root And Bulk Soil	MRSLNLTDDELQDAAQAARIASVQAETDADKQSSPRVKAMFDSSARRWRELAEKFERARV
rootL2_101651566	3300003322	Sugarcane Root And Bulk Soil	KFRAMTPLNLTDDELQDAAQAARIACVQAENDSDKQSSPRVKAMFDSSARRWRELAEKFERARATPRRQG*
Ga0062592_1005907772	3300004480	Soil	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELADKFERARAKTRM*
Ga0062592_1015149042	3300004480	Soil	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELAAKFERARSRLR*
Ga0070658_108678472	3300005327	Corn Rhizosphere	MTPLNLSDDELQDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARARLSRP*
Ga0070690_1000288343	3300005330	Switchgrass Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELASKFERARTSPARR*
Ga0068869_1003741652	3300005334	Miscanthus Rhizosphere	MTPLNLTDDELLDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARVRLTR*
Ga0068869_1021577942	3300005334	Miscanthus Rhizosphere	KFRAMTPINLTDDELMDAAQAARIACVQAETDSDKQSSPRVKAMFDSSARRWRELAEKFERARARVASSR*
Ga0070682_1004842712	3300005337	Corn Rhizosphere	MTSLNLTDDELQDAAQAARIACVQAEKDSERQSNPQVKGMFASSARRWRELAKKFETARLRR*
Ga0070661_1010799361	3300005344	Corn Rhizosphere	MTSLNLTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRELA
Ga0070668_1002103901	3300005347	Switchgrass Rhizosphere	MNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELAAKFERARSRLR*
Ga0070671_1000598704	3300005355	Switchgrass Rhizosphere	MTSLNLTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRELATKFERARARLR*
Ga0070659_1004372201	3300005366	Corn Rhizosphere	MNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELA
Ga0070710_102067832	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVKGMFDSSARRWRELAAKFEKARLNSR*
Ga0070663_1017052302	3300005455	Corn Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELAAKFERARTRSR*
Ga0070662_1001275892	3300005457	Corn Rhizosphere	MNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARSRLR*
Ga0070662_1006539871	3300005457	Corn Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELASKF
Ga0070672_1007859912	3300005543	Miscanthus Rhizosphere	SSRGIFRAMPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELADKFERARAKTRM*
Ga0070686_1000225142	3300005544	Switchgrass Rhizosphere	MSTLNLEDVELQDAAQAARAAAVRADADAERQSNPSIRAMFDSESRRYRELAAKFERARMSRPR*
Ga0070686_1009725781	3300005544	Switchgrass Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELADKFERARAKTRM*
Ga0070704_1009777872	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RGIFRAMPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELADKFERARAKTRM*
Ga0070664_1008746332	3300005564	Corn Rhizosphere	MKELQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKGLFDSSARRWRELANKFERARFDADQRAPRRR*
Ga0070664_1011865742	3300005564	Corn Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELATKFERARTSPARR*
Ga0068854_1006295921	3300005578	Corn Rhizosphere	LQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARARLR
Ga0068859_1006898232	3300005617	Switchgrass Rhizosphere	MTPINLTDDELMDAAQAARIACVQAETDSDKQSSPRVKAMFDSSARRWRELAEKFERARARVASSR*
Ga0068861_1007808732	3300005719	Switchgrass Rhizosphere	MNPLNLTDDELQDAAQAARIASVQAETDADKQASPRIRSMFENSARRWRELADKFERARARLAR*
Ga0066903_1031247232	3300005764	Tropical Forest Soil	MTQLQLDDEELQDAAQAARIASVQAEKDAERQGNPAIKGMFDNSARRWRELAVKFERARLKAG*
Ga0068870_114235491	3300005840	Miscanthus Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELASKFERART
Ga0068862_1000681685	3300005844	Switchgrass Rhizosphere	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELA
Ga0068862_1001734042	3300005844	Switchgrass Rhizosphere	MNPLNLSDDELQDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARMRPTR*
Ga0081455_1000304222	3300005937	Tabebuia Heterophylla Rhizosphere	MSAIQLTDDELQDAAQAARVASALAEKDAEKQSSPKVRGLFENSARRFLELSEKFERARTGPGNR*
Ga0081540_11068552	3300005983	Tabebuia Heterophylla Rhizosphere	MTPLDLSDDELQDAAQAARIACVQAEIDSDKQSSPRVKAMFDGSARRWRELAEKFERARLRMHRS*
Ga0070715_101831352	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VAARPRQSFRTMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVKGMFDSSARRWRELAAKFEKARLNSR*
Ga0070715_108541042	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLNLSDDELMDAAQAARIACVQAENDSDKQSSPRVKAMFDSSARRWRELAEKFERARLRSGPAR*
Ga0097621_1002337252	3300006237	Miscanthus Rhizosphere	MDEGRGLWQFLTPMKTLNLTDDELQDAVQAARIASVQAEKDAERQTNPQVKGMFDSSARRWRELAKKFETARLRSG*
Ga0068871_1006568612	3300006358	Miscanthus Rhizosphere	MDDGRGLWQFSTPMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVRVMFDSSARRWRELAKKFETARLAR*
Ga0068871_1018575841	3300006358	Miscanthus Rhizosphere	MPSISLTPDELQDVAQAARIASVQAEKDAEKQSSPKVRGMFEDTARRFRELAERFERARANARE*
Ga0079222_102832332	3300006755	Agricultural Soil	MNPLQLNDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELAAKFERARTRSR*
Ga0079222_104345012	3300006755	Agricultural Soil	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKSMFDSSARRWRELAAKFERARARLR*
Ga0079215_101953662	3300006894	Agricultural Soil	MTPLNLTDDELQDAAQAARIASEQAEKDAERHTNPTIRSMFDGTARRWRELADKFERARFGMRK*
Ga0079219_116378432	3300006954	Agricultural Soil	MTPLNLSDDELMDAAQAARIACVQAENDSDKQSSPRVKAMFDSSARRWRELAEKFERARLRGGPVR*
Ga0105243_112439802	3300009148	Miscanthus Rhizosphere	MDESPALSDLSAAMKTLDLTDDELQDAAQAARIACVQAEKDSERQSNPQVKGMFASSARRWRELAKKFETARLRR*
Ga0105248_112191922	3300009177	Switchgrass Rhizosphere	MKHLQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKTMFDSSARRWRELAKKFETERMKR*
Ga0105248_117508372	3300009177	Switchgrass Rhizosphere	CAMTSLNLTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRELATKFERARARLR*
Ga0105238_121570962	3300009551	Corn Rhizosphere	MDDGPGLWQFLMPMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVRVMFDSSARRWRELAKKFETARLAR*
Ga0126382_124008021	3300010047	Tropical Forest Soil	MNPLDLTDDELQDAAQAARIACVQAEKDAEKQGNPTIRSMFDSSARRWRELANKF
Ga0105239_111089552	3300010375	Corn Rhizosphere	MDDGPGLWQFLTPMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVRVMFDSSARRWRELAKKFETARLAR*
Ga0134122_101577271	3300010400	Terrestrial Soil	MDARIFPRVNFRAMTPLNLSDDELLDAAQAARIACVQAETDSEKQSSPRVKAMFDSSARRWRELAEKFERAR
Ga0134121_112518422	3300010401	Terrestrial Soil	MDAGRGLWQFLSPMKTLTLTDDELQDAVQAARSASVQAEKDGERQSNPQVKGMFDSSARRWRELAKKFETARLRR*
Ga0134121_118256032	3300010401	Terrestrial Soil	MTPLNLTDDELQDAAQAARIACVQAENDSDKQSSPRVKAMFDSSARRWRELAEKFERARLRAATR*
Ga0150985_1207249132	3300012212	Avena Fatua Rhizosphere	MTPLNFTDDELQDAAQAARIACVQAEKDAEKQSNPAIKSMFDSSARRWRELATKFERARSRLR*
Ga0150984_1000309742	3300012469	Avena Fatua Rhizosphere	MTPLNLSDDELMDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARMRASISR*
Ga0157289_100759702	3300012903	Soil	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQGNPTIRGMFDSSARRWRELAIKFERARARLK*
Ga0157289_102540562	3300012903	Soil	MKHLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARSRLR*
Ga0157296_101858632	3300012905	Soil	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELAEKFERARIKAGAHSG*
Ga0164241_100043169	3300012943	Soil	MTPLQLNDDELQDAAQAARIACVQAEKDAEKQSNPTIKSMFDSSARRWRELADKFERARSRSPRS*
Ga0164299_117075961	3300012958	Soil	MDDGPGLWQFLTPRKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVRVMFDSSARRWRELAKKFETARLAR*
Ga0126369_134799981	3300012971	Tropical Forest Soil	MTQLQLDDDELQDAAQAARIACVQAEKDAERQSNPMIRGMFDSSARRWRELAQKFERARTRRAIRAPRVPQPL*
Ga0164307_114200462	3300012987	Soil	MKHLQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKTMFDSSARRWRELAKKFETERMRR*
Ga0163163_108718792	3300014325	Switchgrass Rhizosphere	MTPLQLTDDELQDAAQAARIACVQAEQDAEKQGNPTIRGMFDSSARRWRELAIKFERARARLK*
Ga0163163_114033852	3300014325	Switchgrass Rhizosphere	MTPLNLTDDELQDAAQAARIACVQAENDSDKQSSPRVKAMFDSSARRWRELAEKFERARVRAATR*
Ga0157379_111571842	3300014968	Switchgrass Rhizosphere	MDVIARRRQSFPTMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVRVMFDSSARRWRELAKKFETARLAR*
Ga0157376_105362533	3300014969	Miscanthus Rhizosphere	MPHINLAPDELQDAAQTARVAAVQAETDAEKQSSPKVKGMFENAARRFRELAERFERARVSARG*
Ga0163161_116779161	3300017792	Switchgrass Rhizosphere	WHASHMPHINLAPDELQDAAQAARVAAVQAETDAEKQSSPKVKGMFENAARRFRELAERFERARVSARG
Ga0190274_100697082	3300018476	Soil	MDGFYEARQNFRAMTPLNLTDDELQDAAQAARIASEQAEKDAERHTNPTIRSMFDGTARRWRELADKFERARFGR
Ga0190274_104499082	3300018476	Soil	MPHIHLAPDELQDAAQAARVAAVQAETDAEKQSSPKIKGMFENAARRFRELAERFERARLNARK
Ga0173482_100220202	3300019361	Soil	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELATKFERARTSPAKR
Ga0173482_101668422	3300019361	Soil	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELAAKFERARSRLR
Ga0173479_105936111	3300019362	Soil	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQGNPTIRGMFDSSARRWRELAIKFERARARLK
Ga0190264_106141762	3300019377	Soil	MPSLQMCDDELQDAAQAARVASVQAEKDAEKQSSPKIRGMFENAARRFRELAERLEKARANSSD
Ga0182009_102683762	3300021445	Soil	MDDGRGLWQLLAPMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVKGMFDSSARRWRELAAKFEKARLNLR
Ga0247746_10989922	3300022886	Soil	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELADKFERARAKTRM
Ga0247762_11466952	3300023169	Plant Litter	MPPLNLTDDELLDAAQAARLASAQAEADAEKHVNPRIRSMHDGCARRWRELAEKFERARARSCVDC
Ga0247780_12066642	3300023265	Plant Litter	MLWHASHMPHINLASDELQDAAQAARVAAAQAEADAEKQSSPSIRAMFDNSARRFRELAARFERVRINGRE
Ga0247765_10738771	3300023268	Plant Litter	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWREL
Ga0247794_100993782	3300024055	Soil	MKELQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKGLFDSSARRWRELANKFERARFDADQRAPRRR
Ga0207685_104095481	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VAARPRQSFRTMKTLNLTDDELQDAVQAARIASVQAEKDAERQSNPQVKGMFDSSARRWRELAAKFEKARLNSR
Ga0207643_103109232	3300025908	Miscanthus Rhizosphere	MNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARSRLR
Ga0207705_109014661	3300025909	Corn Rhizosphere	MTPLNLSDDELQDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARARLSRP
Ga0207662_113565162	3300025918	Switchgrass Rhizosphere	SDDELQDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARARLSRP
Ga0207650_107235682	3300025925	Switchgrass Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELADKFERARAKTRM
Ga0207659_101801332	3300025926	Miscanthus Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELATKFERARTSPARR
Ga0207701_102797382	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELASKFERARTSPARR
Ga0207690_102057741	3300025932	Corn Rhizosphere	MNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATK
Ga0207690_115770772	3300025932	Corn Rhizosphere	MTSLSLTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRELATKFERARARLR
Ga0207711_105616823	3300025941	Switchgrass Rhizosphere	MKHLQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKTMFDSSARRWRELAKKFETERMKR
Ga0207689_109488042	3300025942	Miscanthus Rhizosphere	MTPLNLTDDELLDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARVRLTR
Ga0207661_109943611	3300025944	Corn Rhizosphere	FRAMNPLHLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARSRLR
Ga0207640_117381511	3300025981	Corn Rhizosphere	GFCAMTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIKGMFDSSARRWRELATKFERARARLR
Ga0207658_104694802	3300025986	Switchgrass Rhizosphere	MTPLQLTDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELASKFERARTSPARR
Ga0207639_105070172	3300026041	Corn Rhizosphere	MTPINLTDDELMDAAQAARIACVQAETDSDKQSSPRVKAMFDSSARRWRELATKFERARARLR
Ga0207675_1006843662	3300026118	Switchgrass Rhizosphere	MNPLNLSDDELQDAAQAARIACVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARMRPTR
Ga0207675_1007180942	3300026118	Switchgrass Rhizosphere	MNPLNLTDDELQDAAQAARIASVQAETDADKQASPRIRSMFENSARRWRELADKFERARARLAR
Ga0209074_105046632	3300027787	Agricultural Soil	MNPLQLNDDELQDAAQAARIACVQAEKDAEKQSNPTIRGMFDNSARRWRELAAKFERARTRSR
Ga0268264_102765042	3300028381	Switchgrass Rhizosphere	MDESPALSDLSAAMKTLDLTDDELQDAAQAARIACVQAEKDSERQSNPQVKGMFASSARRWRELAKKFETARLRR
Ga0307276_100887752	3300028705	Soil	MTPLDLSDDELQDAAQAARIASVQAENDSEKQSSPRVKAMFDSSARRWRELAEKFERARLQPRGVASSRR
Ga0307297_102317642	3300028754	Soil	MPNLNLCDDELQDAAQAARVASVQAEKDAEKQSSPKVKGMFENAARRFRELAERFERARRGVAEPR
Ga0307509_104863112	3300031507	Ectomycorrhiza	MDSGFSRQVNFIAMNPLNLTDDELQDAAQAARIASAQAETDADKQSSPRVRSMFENSARRWRELADKFERARMRIAFR
Ga0307408_1002035362	3300031548	Rhizosphere	MDSAGASRHFFAMTPLNFTDDELQDAAQAARIACVQAEKDAEKQTNPTIRGMFDSSARRWRELAAKFERARARLR
Ga0307408_1004935821	3300031548	Rhizosphere	MKPLNLTDDELQDAAQAARIASEQAEKDAERHTNPTLRSMFDGTARRWRELAAKFERARM
Ga0307408_1017931261	3300031548	Rhizosphere	MTPLNLTDDELQDAAQAARIASEQAERDAERHTNPTIRSMFDGTARRWRELADKFERARFGMGK
Ga0310813_106095851	3300031716	Soil	MDGSPAFGDLSRAMKQLQLTDDELQDAAQAARIASVQAEKDSERQSNPQVKGLFDSSARRWRELANKFERARFDGDPRTPRRR
Ga0307405_102083223	3300031731	Rhizosphere	MDGFFRARQNFRAMKPLNLTDDELQDAAQAARIASEQAEKDAERHTNPTLRSMFDGTARRWRELAAKFERARMSGLQR
Ga0307468_1024038472	3300031740	Hardwood Forest Soil	MNPLNLTDDELQDAAQAARIASVQAEADADKQSSPRVKSMFDSSARRWRELADKFERARIRSGSRGQA
Ga0307407_109042621	3300031903	Rhizosphere	MDSAGASRHFFAMTPLNFTDDELQDAAQAARIACVQAEKDAEKQTNPTIRGMFDSSARRWRELAAKF
Ga0308175_1007395222	3300031938	Soil	MTPLNLSDDELQDAAQAARIACVQAENDSDKQSSPRVKAMFDNSARRWRELAEKFERARARVSRP
Ga0307411_113822321	3300032005	Rhizosphere	MTPLNLTDDELQDAAQAARIASEQAERDAERHTNPTIRSMFDGTARRWRELADKFERARFGMSK
Ga0308173_112286581	3300032074	Soil	FTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRELATKFERARARLR
Ga0308173_119195462	3300032074	Soil	MDSRKFARHFSRMTPLNFTDDELQDAAQAARIACVQAEKDAEKQSNPSIKSMFDSSARRWRE
Ga0310890_112526031	3300032075	Soil	RGIFRAMPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELADKFERARAKTRM
Ga0310895_100408522	3300032122	Soil	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELAEKFERARVKTRT
Ga0307415_1003365102	3300032126	Rhizosphere	MDSAGASRHFFAMTPLNFTDDELQDAAQAARIACVQAEKDAEKQTNPTIRGMFDSSARRWRELAAKFERAR
Ga0307415_1003449921	3300032126	Rhizosphere	YPVVTRLQYCMDGFFRARQNFRAMKPLNLTDDELQDAAQAARIASEQAEKDAERHTNPTLRSMFDGTARRWRELAAKFERARMSGLQR
Ga0315910_100693362	3300032144	Soil	MPPLNLTDDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELAEKFERARMKLR
Ga0315910_107499051	3300032144	Soil	DDELQDAAQAARIASVQAEQDADRQTNPKIKGMFDNSARRWRELAVKFERARVKTRT
Ga0307472_1002581413	3300032205	Hardwood Forest Soil	MDSFVPSRHFFAMNPLNLTDDELLDAAQAARIACVQAEKDAEKQSNPTIRSMFDSSARRWRELANKFERARVRAR
Ga0335075_101175002	3300032896	Soil	MPPLNLTDDELQDAAIAARIASAQADLEAERHVNPKIRSMHDSCARRWRELAEKFERARVIGSGGR
Ga0370485_0009635_1_192	3300034358	Untreated Peat Soil	ATLHLLPEQLQDAAQAARVACAQAEKDAEKQSNPSVRGIFENTARRFRELADIFERARASGRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences