Metagenome / Metatranscriptome Family F076563

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076563
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	66 residues
Representative Sequence	LTDTLEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGIVSLHEMPDFIRLIAAQNQRT
Number of Associated Samples	109
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.24 %
% of genes near scaffold ends (potentially truncated)	93.22 %
% of genes from short scaffolds (< 2000 bps)	94.92 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.915 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.102 % of family members)
Environment Ontology (ENVO)	Unclassified (24.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.763 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.64% β-sheet: 9.09% Coil/Unstructured: 52.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01323	DSBA	5.93
PF07519	Tannase	4.24
PF00196	GerE	2.54
PF03712	Cu2_monoox_C	2.54
PF13360	PQQ_2	1.69
PF09209	CecR_C	1.69
PF00753	Lactamase_B	1.69
PF12844	HTH_19	1.69
PF13419	HAD_2	1.69
PF01436	NHL	0.85
PF04273	BLH_phosphatase	0.85
PF05598	DUF772	0.85
PF00903	Glyoxalase	0.85
PF01593	Amino_oxidase	0.85
PF13565	HTH_32	0.85
PF01431	Peptidase_M13	0.85
PF13520	AA_permease_2	0.85
PF02786	CPSase_L_D2	0.85
PF13676	TIR_2	0.85
PF13669	Glyoxalase_4	0.85
PF03928	HbpS-like	0.85
PF01527	HTH_Tnp_1	0.85
PF12867	DinB_2	0.85
PF03450	CO_deh_flav_C	0.85
PF01425	Amidase	0.85
PF06283	ThuA	0.85
PF01814	Hemerythrin	0.85
PF07586	HXXSHH	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	0.85
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.76 %
Unclassified	root	N/A	4.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.76 %
Unclassified	root	N/A	4.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.92 %
Unclassified	root	N/A	4.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.08 %
Unclassified	root	N/A	4.24 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.58 %
Unclassified	root	N/A	4.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.39 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.69 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.85 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.85 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.85 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.85 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.85 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.85 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.85 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.85 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.85 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.58 %
Unclassified	root	N/A	4.24 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.85 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.85 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.85 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
uncultured bacterium BAC10-10	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002912\|JGI25386J43895_10061045	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300004139\|Ga0058897_11107144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300004139\|Ga0058897_11173385	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300005178\|Ga0066688_10782637	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300005181\|Ga0066678_10143233	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300005184\|Ga0066671_10076804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300005434\|Ga0070709_10055582	All Organisms → cellular organisms → Bacteria → Acidobacteria	2500	Open in IMG/M
3300005439\|Ga0070711_100343695	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005466\|Ga0070685_10197137	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300005536\|Ga0070697_100265714	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300005545\|Ga0070695_100281080	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300005553\|Ga0066695_10472229	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005557\|Ga0066704_10728828	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300005560\|Ga0066670_10094940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1658	Open in IMG/M
3300005563\|Ga0068855_100660560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300005602\|Ga0070762_11216264	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300006050\|Ga0075028_100339412	Not Available	846	Open in IMG/M
3300006163\|Ga0070715_10110711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1295	Open in IMG/M
3300006354\|Ga0075021_10444330	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300006796\|Ga0066665_10946288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300006797\|Ga0066659_11442495	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006854\|Ga0075425_100772846	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006904\|Ga0075424_101456034	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300007255\|Ga0099791_10381911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300009012\|Ga0066710_100605800	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300009098\|Ga0105245_10105161	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300009137\|Ga0066709_103704002	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300009177\|Ga0105248_10388503	All Organisms → cellular organisms → Bacteria → Acidobacteria	1571	Open in IMG/M
3300009524\|Ga0116225_1411087	Not Available	602	Open in IMG/M
3300009700\|Ga0116217_10990805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009839\|Ga0116223_10118593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1662	Open in IMG/M
3300010375\|Ga0105239_13351529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010376\|Ga0126381_101545620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300010398\|Ga0126383_10676417	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300011119\|Ga0105246_10394817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300011119\|Ga0105246_11150676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300011119\|Ga0105246_12191456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300011269\|Ga0137392_10511607	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300012096\|Ga0137389_11757999	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012200\|Ga0137382_10566217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300012202\|Ga0137363_11640855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012210\|Ga0137378_10429259	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012925\|Ga0137419_11068899	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300012929\|Ga0137404_10258540	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300012930\|Ga0137407_10861949	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300012931\|Ga0153915_12759370	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300013296\|Ga0157374_12573945	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300013307\|Ga0157372_11057589	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300014169\|Ga0181531_10869423	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300014489\|Ga0182018_10337591	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300014493\|Ga0182016_10790263	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300014499\|Ga0182012_10380346	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300014501\|Ga0182024_10341300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1961	Open in IMG/M
3300014968\|Ga0157379_12431230	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300014969\|Ga0157376_10262879	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1618	Open in IMG/M
3300015054\|Ga0137420_1067826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1872	Open in IMG/M
3300015358\|Ga0134089_10166340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300017822\|Ga0187802_10284242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300017933\|Ga0187801_10237787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300017934\|Ga0187803_10078490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1298	Open in IMG/M
3300017934\|Ga0187803_10427577	Not Available	539	Open in IMG/M
3300017959\|Ga0187779_10069726	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300017972\|Ga0187781_11316821	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BAC10-10	533	Open in IMG/M
3300017993\|Ga0187823_10036964	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300018006\|Ga0187804_10412436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300018033\|Ga0187867_10632517	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300020582\|Ga0210395_11351105	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021046\|Ga0215015_10299883	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300021178\|Ga0210408_10968257	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300021178\|Ga0210408_11086061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300021178\|Ga0210408_11336165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300021401\|Ga0210393_10490061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300021405\|Ga0210387_11179252	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021406\|Ga0210386_10388024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1203	Open in IMG/M
3300021420\|Ga0210394_10883597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300021559\|Ga0210409_10879257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	770	Open in IMG/M
3300022724\|Ga0242665_10131721	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300022726\|Ga0242654_10188942	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300025907\|Ga0207645_10940150	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300025927\|Ga0207687_10559770	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300025928\|Ga0207700_10746290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	875	Open in IMG/M
3300025931\|Ga0207644_10856441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300025941\|Ga0207711_10160083	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300025944\|Ga0207661_10396993	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300025944\|Ga0207661_12160357	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300026314\|Ga0209268_1096660	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300026323\|Ga0209472_1189426	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300026482\|Ga0257172_1054211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300026508\|Ga0257161_1140572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300026538\|Ga0209056_10387595	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300027388\|Ga0208995_1015381	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300027651\|Ga0209217_1164939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300027674\|Ga0209118_1181287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027855\|Ga0209693_10603247	Not Available	518	Open in IMG/M
3300027867\|Ga0209167_10631530	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300027869\|Ga0209579_10212302	All Organisms → cellular organisms → Bacteria → Acidobacteria	1037	Open in IMG/M
3300027894\|Ga0209068_10083557	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300027894\|Ga0209068_10329562	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027894\|Ga0209068_10815800	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300027911\|Ga0209698_11031662	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300028381\|Ga0268264_12135918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300028906\|Ga0308309_10188192	All Organisms → cellular organisms → Bacteria → Acidobacteria	1692	Open in IMG/M
3300029923\|Ga0311347_10639607	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300030845\|Ga0075397_10826792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031640\|Ga0318555_10041455	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300031708\|Ga0310686_103140664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300031712\|Ga0265342_10105245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1603	Open in IMG/M
3300031716\|Ga0310813_10752831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300031719\|Ga0306917_10966043	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300031820\|Ga0307473_10411826	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300031941\|Ga0310912_11162219	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300031942\|Ga0310916_10060767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2923	Open in IMG/M
3300031954\|Ga0306926_10739746	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300031962\|Ga0307479_10877273	Not Available	870	Open in IMG/M
3300032044\|Ga0318558_10154491	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300032065\|Ga0318513_10627472	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300032421\|Ga0310812_10420005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	602	Open in IMG/M
3300032805\|Ga0335078_10435704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.90%
Host-Associated	Host-Associated	16.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.19%
Plants	Host-Associated → Plants	16.10%
Aquatic	Environmental → Aquatic	12.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.41%
Freshwater	Environmental → Aquatic → Freshwater	7.63%
Sediment	Environmental → Aquatic → Sediment	5.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Peat	Environmental → Terrestrial → Peat	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.08%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25386J43895_100610453	3300002912	Grasslands Soil	DTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV*
Ga0058897_111071441	3300004139	Forest Soil	EGIKTARSVGVHPILMMNDPDEARRLAMHNPAGGVVSLHEMPDFIRLLAAQNQRG*
Ga0058897_111733852	3300004139	Forest Soil	SALAAAGLDPAHTMFLTDTADGLQVVKAVGISSILMMNDPDEALQLADQNPSAGIVSLHELPDFIRLVVAENARITKS*
Ga0066688_107826372	3300005178	Soil	FLTDTAEGLKVAKSAGVQPILMMNDPDEARRLAIHDPAGGIVSLHELPDFIRLVAAENAR
Ga0066678_101432331	3300005181	Soil	DTAEGLKVAEETGTNPILMMNDPDEAMELAMHQPAGGIVSLHELPDFIRLVAAENAKMGS
Ga0066671_100768042	3300005184	Soil	AMFLTDTAEGLKIANTLGLNSILMMNDPDEAMRLAAHDPSGGIVSLHELPDFIRLVAAENAGKQ*
Ga0070709_100555821	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFLTDTLDGVKTARSAGVHPILMMNDPDEAQRLAMHNPAGGVISLHEVPDFLRVIAAQYERTLRKP*
Ga0070711_1003436953	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TALGRASLARESAMFLTDTLDGVKTARSAGVHPILMMNDPDEAQRLAMHNPAGGVISLHEMPDFLRVIAAQYERTLRKP*
Ga0070685_101971373	3300005466	Switchgrass Rhizosphere	VRCASLVPENVIFLTDTVEGIRVARSAGVHPILMMNDPDTARRLAMHNPAGGVVSLHEIPDFIRLIAAQRSKVDGT*
Ga0070697_1002657143	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ITVEPGHAMFLTDNEEGLNIANALGVNSILMMNDPDEAMRLSEHSPSGGIVSLHELPDFIRLVAYNASNRRNS*
Ga0070695_1002810801	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SPENAIFLTDTVEGIKVARAAGVHPILMMNDPDEARRLATYNPAGGVVSLHEIPDVIRLIAAQNKNA*
Ga0066695_104722292	3300005553	Soil	LEPEHGMFITDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV*
Ga0066704_107288282	3300005557	Soil	PQHVMFLTDTAEGLKVAEETGTNPILMMNDPDEAMELAMHQPAGGIVSLHELPDFIRVVAAENAKMGS*
Ga0066670_100949401	3300005560	Soil	AGLEPEHGMFITDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV*
Ga0068855_1006605602	3300005563	Corn Rhizosphere	DTAEGLKVANNLGVISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK
Ga0070762_112162641	3300005602	Soil	LNALGSTSLPPERTMFLTDTVEGIKVARGVGVHPILMMNDPDEAQRLSMHNPAGGIVSLHEMPDFIRLIAAQNQRA*
Ga0075028_1003394122	3300006050	Watersheds	VLAAASLEPEHAMYLADTAEALNVARESGVHPVLMMNDPDEAMRLTAHRPAGGIVSLHELPDFMRLLAAQSAAQ*
Ga0070715_101107113	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LRGASLQPENVIFLTDTVEGIKAARTAGAHPVLMMNDPDEARRLATHHPAGGVVSLHEMPDFIRLIAAQNKRT*
Ga0075021_104443301	3300006354	Watersheds	LTDTVEGIKVARNIGVHPILMMNDPDEAQRLAMHNPSGGVISMHEMPDFIRLLAAQNQRG
Ga0066665_109462881	3300006796	Soil	TDTAEGLKVAKEVGVNSILMINDQDQARRLAMDDPSGGIVSLHELPDFIRLVVAENARLPRL*
Ga0066659_114424952	3300006797	Soil	QHVMFLTDTAEGLKVAEETGTNPILMMNDPDEAMELAMHQPAGGIVSLHELPDFIRLVAAENAKMGS*
Ga0075425_1007728464	3300006854	Populus Rhizosphere	ISVEPGHAMFLTATEEGLNLANSLGVNSILMMNDPDEAMRLSEHNPSGGIVSFHELPDFIRLVAYNASNRRNS*
Ga0075424_1014560343	3300006904	Populus Rhizosphere	ALNSTSLPPEQAMFLTDTTEGIKVARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARMTQTL*
Ga0099791_103819111	3300007255	Vadose Zone Soil	LLAALGGASLAPDQAMYLTDTVEGIKAARSAGVHPILIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNTRR*
Ga0066710_1006058001	3300009012	Grasslands Soil	SLKAEQTMFLTDTGDGLKVAKSVGVNSILMMNDPDEAMRLAAHTPSGGIVSLHELPDFIRFIAAENAR
Ga0105245_101051611	3300009098	Miscanthus Rhizosphere	QAMFLTDTTEGIKVARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNKRAQLGLI*
Ga0066709_1037040021	3300009137	Grasslands Soil	AGIEPAHAMFLTDTLDGLDLVKTLGMNSILMMNDPDEALPLSDQNPTAGVVSLHELPDFMRLVAAENTRSFRP*
Ga0105248_103885031	3300009177	Switchgrass Rhizosphere	NPERVMYLTDTAEGLNVANNLGVISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK*
Ga0116225_14110871	3300009524	Peatlands Soil	HGASLQPENVMFLTDTVEGIKVARSAGVQPVLMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNKRGRPSGA*
Ga0116217_109908051	3300009700	Peatlands Soil	IKVARNVGVLPILMMNDPDEAQRLAMHNPAGGVVSLHEMPDFIRLIAAQNQRG*
Ga0116223_101185932	3300009839	Peatlands Soil	MFLTDTAEGLKVAESVGVNPILMMNDPDESRRLAMHKPAGGIVSLHELPDFIRIVQAENARSY*
Ga0105239_133515291	3300010375	Corn Rhizosphere	TTEGIKVARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNTRAQLGPI*
Ga0126381_1015456201	3300010376	Tropical Forest Soil	AVAGASLRPEQVLFLTDTLEGLKVAQGLHVHPILMMNDPDEARRLAMHNPSGGIVSLHELPDFIRLVAAENSNRPGATRFR*
Ga0126383_106764173	3300010398	Tropical Forest Soil	PEHGMFITDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRMVAAENARRI*
Ga0105246_103948171	3300011119	Miscanthus Rhizosphere	TVEGIKVARAAGVHPILMMNDPDEARRLATHNPAGGVVSMHEIPDFIRLIAAQNSQQV*
Ga0105246_111506763	3300011119	Miscanthus Rhizosphere	IRVARSAGVHPILMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQRSKVDGT*
Ga0105246_121914561	3300011119	Miscanthus Rhizosphere	ARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNTRAQLGPI*
Ga0137392_105116071	3300011269	Vadose Zone Soil	REKTMFLTDTAEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVISLHEMPDFIRLIAAQNQRG*
Ga0137389_117579991	3300012096	Vadose Zone Soil	MFLTDTVEGIKVARSAGVHPILMMNDPDEARRLALHNPAGGVVSLHEIPDFIRLIAAQNETR*
Ga0137382_105662171	3300012200	Vadose Zone Soil	QEKTMFLTDTLEGIKVARSVGVHPILMMNDPDEAQRLALHNPAGGIVSLHEMPDFIRLIAAQNQRT*
Ga0137363_116408551	3300012202	Vadose Zone Soil	VEGIKAARSAGVHPILMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNKRE*
Ga0137378_104292591	3300012210	Vadose Zone Soil	TDTADGLQVANSLGLNSILMMNDPDEAIRLAVHGPWGGIVSLHELPDFIRLVAAENRRV*
Ga0137419_110688991	3300012925	Vadose Zone Soil	ATLMPSKVSRRRRCFTDTLEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGIVSLHEMPDFIRLIAAQNQRT*
Ga0137404_102585403	3300012929	Vadose Zone Soil	EGIKVARSVGVHPILMMNDPDESQRLAMHNPAGGVVSLHEMPDFIRLIAAQNQRG*
Ga0137407_108619492	3300012930	Vadose Zone Soil	SFKPQHVMFLTDTAEGLKVAEETGTNPILMMNDPDEAMELAMHQPAGGIVSLHELPDFIRLVAAENTKMGS*
Ga0153915_127593701	3300012931	Freshwater Wetlands	VAQSIGVNPILMMNDPDEARRLAMHDPAGGIVSLHELPDFIRLVAAENARLPISGII*
Ga0157374_125739451	3300013296	Miscanthus Rhizosphere	GLKVANNVGLISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK*
Ga0157372_110575892	3300013307	Corn Rhizosphere	MYLTDTAEGLKVGNSLGVTSVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENATIRK*
Ga0181531_108694231	3300014169	Bog	TSLKPEDVIFLTDTFEGLKVSKTVGVPSVLMMNDPDEGRRLAMHNPSAGIVSLHELPDFLRLLTATNLP*
Ga0182018_103375911	3300014489	Palsa	MYLTDTVEGIRAARGAGVHPVLMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNKRG*
Ga0182016_107902632	3300014493	Bog	RALTAPAHTIFLADTAEGLKVAENVGVNAVLMMNDPDEAKRLAMHHPAGGIVSLHELPDFIRVVRATAAIR*
Ga0182012_103803462	3300014499	Bog	NPPEQAIFLADTVEGIKAARTAGVLPILMMNDPDEAQRLETHKPAGGVVSLHEIPDFIRLVAAQNQRG*
Ga0182024_103413004	3300014501	Permafrost	MYLTDTVEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVVSMHEMPDFIRLIAAQNQRG*
Ga0157379_124312301	3300014968	Switchgrass Rhizosphere	DTAEGLKVANSLGVISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK
Ga0157376_102628793	3300014969	Miscanthus Rhizosphere	SLVPGNVIFLTDTVEGIKVARSAGVHPILMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNSRDPR*
Ga0137420_10678261	3300015054	Vadose Zone Soil	GIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVVSGVVSLHEMPDFIRLIAAQNQRG*
Ga0134089_101663402	3300015358	Grasslands Soil	VDPEQLMFLTDTAEGLKVAGAVGVNPILMMNDPAEAMRLAMHDPAGGIVSLHELPDFIRLVAAENAGIRGRRPDGGQVV*
Ga0187802_102842421	3300017822	Freshwater Sediment	TDTVEGIKTARNAGVHPILMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNRRG
Ga0187801_102377872	3300017933	Freshwater Sediment	GLKVARSAGVTPILMMNDPDEALRLVAHNPAGGIVSLHELPDFIRLVSANVSGEAARQGV
Ga0187803_100784902	3300017934	Freshwater Sediment	EPQNAMFLTDTAEGLKVARSAGVTPILMMNDPDEALRLVAHNPAGGIVSLHELPDFIRLVSANVSGEAARQGVV
Ga0187803_104275772	3300017934	Freshwater Sediment	MFLTDTAEGLKVAQHVGVNSVLMMNDPDEARRLALQDPAGGIVSLHELPDFLRLVRAENAKSLHSD
Ga0187779_100697261	3300017959	Tropical Peatland	LKTAKSAGVQAVLMMNDPDEARRLAMHEPAGGIVSLYELPDFVRLLMARNAQRIS
Ga0187781_113168212	3300017972	Tropical Peatland	GALASASLEPGHGIFLTDTVEGIKVARSTGVHPILMMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAAQNQRT
Ga0187823_100369641	3300017993	Freshwater Sediment	ASLPREKTMFLTDTVEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVISLHEMPDFIRLIAAQNQRA
Ga0187804_104124361	3300018006	Freshwater Sediment	NAMFLTDTAEGLKVARSAGVTPILMMNDPDEALRLVAHNPAGGIVSLHELPDFIRLVSANVSGEAARQGVV
Ga0187867_106325172	3300018033	Peatland	ALSDGSLEKPHSPESTMFLTDTFEGIKVARAARVHPILMMNDPDEAQRLATHNPAGGVVSLHEIPDFIRLVAAQNQRG
Ga0210395_113511052	3300020582	Soil	AASLKAPQAMFLTDTAEGLNVAASVGVNAILMMNDPDESRRLTTRNPAGGIVSLHELPDFIRFLRAEKSTSQR
Ga0215015_102998833	3300021046	Soil	MFLTDTLEGIKTARNVGVLPILMMNDPDEAQRLAMHNPAGGVISLHEMPDFIRLIAAQYERG
Ga0210408_109682572	3300021178	Soil	EKTMFLTDTVEGIKVARSVDVHPILMMNDPDEAQRLAMHNPAGGVVSLHEMPDFIRVIAAQNQRA
Ga0210408_110860611	3300021178	Soil	LARERTMFLTDTVEGIKTARSVGVHPILMMNDPDEAQRLAMHNPSGGVVSLHEMPDFIRLIAAQNQRG
Ga0210408_113361652	3300021178	Soil	LTDTLEGIKTARSVGVHPILMMSDPDEAQRLAMHNPAGGVVSLHEMPDFIRLVAVQFKRGRSENRKVTPARND
Ga0210393_104900611	3300021401	Soil	IKAARIAGVHPILMMNDPDEARRLAALSPAGGVVSFHEIPDFLRLIMAQNIHGTHPFQDS
Ga0210387_111792522	3300021405	Soil	FLTDTAEGLRVAESVGVNSVLMMNDPDESRRLAMLNPGGGIVSLHELPDFIRLVRGTQNGES
Ga0210386_103880242	3300021406	Soil	QSALAAAALSAANTMFLTDTAEGLKVAESVGVNSILMMNDPDESRRLAMHNPAGGIVSLHELPDFIRLLRAQQ
Ga0210394_108835972	3300021420	Soil	LAGASLPPETTMFLADTVEGIKAARRAGVHPILMMNDPDEARRLATHNPAGGIVSLHEMPDFIRLIAAQNERR
Ga0210409_108792571	3300021559	Soil	QVMFITDTLEGLKVAKTVGVNSILMMNDPDESRRLAMHDPAGGIVSLHELPDFIRLVAAENATRPTN
Ga0242665_101317213	3300022724	Soil	TDTADGLEVVNALGINSILMMNDPDEALPLADQNPSAGVVSLHELPDFIRLVVAENARVTKS
Ga0242654_101889422	3300022726	Soil	AAGIEPNHAMVLTDTADGLEVVNALGINSILMMNDPDEALPLADQNPSAGVVSLHELPDFIRLVVAENARVTKS
Ga0207645_109401502	3300025907	Miscanthus Rhizosphere	EHVMYLTDTAEGLKVANSLGVISVLMMNDPDEARRLTTHEPSGGIVSLHELPDFIRLVAAENAMIKK
Ga0207687_105597701	3300025927	Miscanthus Rhizosphere	SLLPEQSMFLTDTTEGIKVARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNTRAQLGPI
Ga0207700_107462901	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LFLTDNAEGIQAAKDAGVNPILMMNDPDEAMRLTAHNPAGGIVSLHELPDLVRLVALQNTRHP
Ga0207644_108564412	3300025931	Switchgrass Rhizosphere	IAAASLNPENVMYLTDTAEGLKVANNVGLISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK
Ga0207711_101600833	3300025941	Switchgrass Rhizosphere	NPERVMYLTDTAEGLNVANNLGVISVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENAMIKK
Ga0207661_103969932	3300025944	Corn Rhizosphere	LNPEHVMYLTDTAEGLKVANSLGVISVLMMNDPDEARRLTTHEPSGGIVSLHELPDFIRLVAAENAMIKK
Ga0207661_121603571	3300025944	Corn Rhizosphere	YLTDTAEGLKVANSLGVTSVLMMNDPDEARRLTTHEPAGGIVSLHELPDFIRLVAAENATIRK
Ga0209268_10966602	3300026314	Soil	MFITDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV
Ga0209472_11894261	3300026323	Soil	TDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV
Ga0257172_10542111	3300026482	Soil	LLNALVGASLPREKTMFLTDTVEGIKVARSVGVHPILMMNDPDESQRLAMHNPAGGVVSLHEMPDFIRLIAAQNQRG
Ga0257161_11405721	3300026508	Soil	KVGRSVGVHPILMMNDPDEAQRLAMHNPAGGIVSLHEMPDFIRLLAAQNQRG
Ga0209056_103875952	3300026538	Soil	EAEHGMFITDTADGLQVANSLGLNSILMMNDPDEAMRLAVHGPSGGIVSLHELPDFIRLVAAENRRV
Ga0208995_10153811	3300027388	Forest Soil	LTDTLEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGIVSLHEMPDFIRLIAAQNQRT
Ga0209217_11649392	3300027651	Forest Soil	TLEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGIVSLHEMPDFIRLIAAQNQRS
Ga0209118_11812871	3300027674	Forest Soil	IKVARSVGVHPILMMNDPDEAQRLAMHNPSGGVVSLHEMPDFIRLIAAQNQRG
Ga0209693_106032471	3300027855	Soil	LEARQAMFLTDTAEGLKVAESVGVNPILMMNDPDESRRLAMHDPAGGIVSLHELPDFIRLVRAENMRPRHELPSD
Ga0209167_106315302	3300027867	Surface Soil	TLEGIQAARSAGVLPILMMNDPDEAQRLAMHNPAGGVVSLSEMPDFLRLLAAQNRSG
Ga0209579_102123023	3300027869	Surface Soil	VDPAHAMFLTDTADGLELVSALGTHSILMMNDPDEALQLADQNPSAGVISLHELPDFIRLVVAENARVTKS
Ga0209068_100835573	3300027894	Watersheds	GIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVVSLHEMPDFLRLIAAQNQNG
Ga0209068_103295622	3300027894	Watersheds	SASLPPEKTMFLTDTVEGIKVARNIGVHPILMMNDPDEAQRLAMHNPSGGVISMHEMPDFIRLLAAQNQRG
Ga0209068_108158002	3300027894	Watersheds	MYLADTAEALNVARESGVHPVLMMNDPDEAMRLTAHRPAGGIVSLHELPDFMRLLAAQNAAQ
Ga0209698_110316622	3300027911	Watersheds	SLTRQKTMFLTDTVEGIKVARSVGVHPILMMNDPDEAQRLAMHNPAGGVVSLHEMPDFLRLIAAQNQRG
Ga0268264_121359181	3300028381	Switchgrass Rhizosphere	DTTEGIKVARSAGVHPVLIMNDPDEARRLAMHNPAGGVVSLHEIPDFIRLIAARNKRAQLGPI
Ga0308309_101881923	3300028906	Soil	STSLPPERTMFLTDTVEGIKVARGVGVHPILMMNDPDEAQRLAMHNPSGGVISLHEMPDFIRLLAAQNQRG
Ga0311347_106396071	3300029923	Fen	QAEGILFLTDTVEGIKAARSAGVLPILMMNDPDEAQRLETHKPAGGVVSLHEVPDFVRLVAAQNQLA
Ga0075397_108267921	3300030845	Soil	MYLTDTVEGINVARSAGVHPILMMNDPDEARRLAMHNPTGGVVSLHEIPDFIRLIAAQNKSRAE
Ga0318555_100414553	3300031640	Soil	MFLADTAEGFKVAKRVGVNTILMMNDPDEARRLALEEPAGGIVSLYELPDFLRLVTAQNAGRA
Ga0310686_1031406642	3300031708	Soil	LTDTAEGIKAARNAGVHPILMMNDPDEARRLATHNPAGGVVSLHEIPDFIRLIAARNAG
Ga0265342_101052451	3300031712	Rhizosphere	QHVMYLTDTAEGLKVANSLGVTSVLMMNDPDEARRLTTHNPAGGIVSLHELPDFIRLVAAENAMIRK
Ga0310813_107528312	3300031716	Soil	MFLTDTVEGIKVARSAGVHPVLIMNDPDEAKRLATYNPAGGVVSLHEIPDFIRLIVAQNKSR
Ga0306917_109660432	3300031719	Soil	MFLADTAEGFKVAKRVGVNTILMMNDPDEARRLALEEPAGGIVSLYELPDFLRLVTAQNAGRS
Ga0307473_104118263	3300031820	Hardwood Forest Soil	QRAHAMFLTDTADGLEVVNALGINSILMMNDPDEALPLADQNPSAGVVSLHELPDFIRLVVAENARVTKS
Ga0310912_111622192	3300031941	Soil	MFLADTAEGFKVAKRVGVNTILMMIDPDEARRLALEEPAGGIVSLYELPDFLRLVRAQNAGRA
Ga0310916_100607673	3300031942	Soil	TAEGFKVAKRVGVNTILMMNDPDEARRLALEEPAGGIVSLYELPDFLRLVTAQNAGRS
Ga0306926_107397461	3300031954	Soil	MYLTDNAEGLKVAKRGGLQSVLMMNDPDEAKRLALQNPTGGIVSLLELPDFIRLVAANRGSSL
Ga0307479_108772731	3300031962	Hardwood Forest Soil	FLTDTLEGIKTARCVDVHPILMMNDPDEAQRLAMHNPAGGVVSLNEIPDFIRVLAAQNQR
Ga0318558_101544912	3300032044	Soil	VMFLADTAEGFKVAKRVGVNTILMMNDPDEARRLALEEPAGGIVSLYELPDFLRLVTAQNAGRA
Ga0318513_106274722	3300032065	Soil	VMFLADTAEGFKVAKRVGVNTILMMNDPDEARRLALEEPAGGIVSLYELPDFLRLVTAQNAGRS
Ga0310812_104200051	3300032421	Soil	LTDTVEGIKVARAAGVHPILMMNDPDEARRLATYNPAGGVVSLHEIPDVIRLIAAQNKNA
Ga0335078_104357041	3300032805	Soil	FAQASVPLHRAMFLTDTAEGLKVARSVGVQAVLMMNDPDESRRLAAHDPAGGIVSLHELPDFIRFVREQKRLAPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences