Metagenome Family F076579

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076579
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	61 residues
Representative Sequence	MRNFILGIVITILVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHAPRLN
Number of Associated Samples	102
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.83 %
% of genes near scaffold ends (potentially truncated)	96.61 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.797 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (43.220 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.288 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.14% β-sheet: 0.00% Coil/Unstructured: 48.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02780	Transketolase_C	52.54
PF01381	HTH_3	0.85
PF13240	zinc_ribbon_2	0.85
PF00158	Sigma54_activat	0.85
PF01967	MoaC	0.85
PF02779	Transket_pyr	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.80 %
Unclassified	root	N/A	32.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.80 %
Unclassified	root	N/A	32.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.80 %
Unclassified	root	N/A	32.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.68 %
Unclassified	root	N/A	32.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	32.20 %
Unclassified	root	N/A	32.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.08 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.20 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.08 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.20 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	24.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.20 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	24.58 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.08 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.20 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	24.58 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.08 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig32778.20931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1414	Open in IMG/M
3300001356\|JGI12269J14319_10140619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1059	Open in IMG/M
3300001593\|JGI12635J15846_10192035	Not Available	1358	Open in IMG/M
3300001593\|JGI12635J15846_10443719	Not Available	775	Open in IMG/M
3300001593\|JGI12635J15846_10784956	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	546	Open in IMG/M
3300001661\|JGI12053J15887_10443665	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	622	Open in IMG/M
3300004091\|Ga0062387_100167334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1288	Open in IMG/M
3300004152\|Ga0062386_100359991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1167	Open in IMG/M
3300005712\|Ga0070764_10718764	Not Available	616	Open in IMG/M
3300006050\|Ga0075028_100959452	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	530	Open in IMG/M
3300006052\|Ga0075029_100492490	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	808	Open in IMG/M
3300006102\|Ga0075015_100707974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	598	Open in IMG/M
3300009519\|Ga0116108_1053580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1274	Open in IMG/M
3300009520\|Ga0116214_1048454	Not Available	1540	Open in IMG/M
3300009523\|Ga0116221_1207722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	848	Open in IMG/M
3300009524\|Ga0116225_1407506	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009549\|Ga0116137_1080170	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300009630\|Ga0116114_1142629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	615	Open in IMG/M
3300009632\|Ga0116102_1091558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	885	Open in IMG/M
3300009634\|Ga0116124_1214578	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300009641\|Ga0116120_1224695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300009643\|Ga0116110_1281738	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009644\|Ga0116121_1258596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009645\|Ga0116106_1236649	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009672\|Ga0116215_1115610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1200	Open in IMG/M
3300009839\|Ga0116223_10487303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	719	Open in IMG/M
3300010341\|Ga0074045_10220950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1262	Open in IMG/M
3300010341\|Ga0074045_10752772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	617	Open in IMG/M
3300010343\|Ga0074044_10317828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1023	Open in IMG/M
3300010379\|Ga0136449_101418841	Not Available	1070	Open in IMG/M
3300010379\|Ga0136449_102829453	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012096\|Ga0137389_10161993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1840	Open in IMG/M
3300012189\|Ga0137388_10839733	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300012205\|Ga0137362_11395210	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012211\|Ga0137377_10479065	Not Available	1183	Open in IMG/M
3300012361\|Ga0137360_10940132	Not Available	746	Open in IMG/M
3300014152\|Ga0181533_1182796	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300014155\|Ga0181524_10482984	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300014156\|Ga0181518_10376913	Not Available	690	Open in IMG/M
3300014159\|Ga0181530_10020015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5151	Open in IMG/M
3300014159\|Ga0181530_10145039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1360	Open in IMG/M
3300014165\|Ga0181523_10449356	Not Available	715	Open in IMG/M
3300014168\|Ga0181534_10313149	Not Available	849	Open in IMG/M
3300017929\|Ga0187849_1296667	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300017933\|Ga0187801_10127760	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300017933\|Ga0187801_10442416	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300017934\|Ga0187803_10000326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19555	Open in IMG/M
3300017938\|Ga0187854_10424389	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300017941\|Ga0187850_10056066	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300017941\|Ga0187850_10156022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1068	Open in IMG/M
3300017943\|Ga0187819_10308278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	919	Open in IMG/M
3300017948\|Ga0187847_10066220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2027	Open in IMG/M
3300017955\|Ga0187817_10229346	Not Available	1183	Open in IMG/M
3300018006\|Ga0187804_10341532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	657	Open in IMG/M
3300018008\|Ga0187888_1206672	Not Available	777	Open in IMG/M
3300018008\|Ga0187888_1290963	Not Available	629	Open in IMG/M
3300018012\|Ga0187810_10151575	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300018012\|Ga0187810_10215707	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300018012\|Ga0187810_10251826	Not Available	725	Open in IMG/M
3300018016\|Ga0187880_1288718	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300018017\|Ga0187872_10072640	Not Available	1777	Open in IMG/M
3300018019\|Ga0187874_10192856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	849	Open in IMG/M
3300018021\|Ga0187882_1362593	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300018022\|Ga0187864_10263127	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300018033\|Ga0187867_10731287	Not Available	539	Open in IMG/M
3300018042\|Ga0187871_10820198	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018062\|Ga0187784_10973491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	675	Open in IMG/M
3300018086\|Ga0187769_10450756	Not Available	969	Open in IMG/M
3300018086\|Ga0187769_10700002	Not Available	766	Open in IMG/M
3300018090\|Ga0187770_11529693	Not Available	543	Open in IMG/M
3300019082\|Ga0187852_1250813	Not Available	716	Open in IMG/M
3300019082\|Ga0187852_1342715	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	589	Open in IMG/M
3300019787\|Ga0182031_1028872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1248	Open in IMG/M
3300019890\|Ga0193728_1126814	Not Available	1150	Open in IMG/M
3300020583\|Ga0210401_11454390	Not Available	543	Open in IMG/M
3300021086\|Ga0179596_10239165	Not Available	894	Open in IMG/M
3300021086\|Ga0179596_10549855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300021180\|Ga0210396_10382755	Not Available	1238	Open in IMG/M
3300021411\|Ga0193709_1064817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300023090\|Ga0224558_1106576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	968	Open in IMG/M
3300025453\|Ga0208455_1062318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	767	Open in IMG/M
3300025460\|Ga0208562_1039533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1061	Open in IMG/M
3300025477\|Ga0208192_1034210	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300025922\|Ga0207646_10619126	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300026294\|Ga0209839_10032274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1977	Open in IMG/M
3300026515\|Ga0257158_1035476	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300026532\|Ga0209160_1158133	Not Available	1019	Open in IMG/M
3300027562\|Ga0209735_1023946	Not Available	1259	Open in IMG/M
3300027669\|Ga0208981_1123334	Not Available	661	Open in IMG/M
3300027674\|Ga0209118_1007855	All Organisms → cellular organisms → Bacteria	3820	Open in IMG/M
3300027729\|Ga0209248_10117644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	799	Open in IMG/M
3300027846\|Ga0209180_10383065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	799	Open in IMG/M
3300027884\|Ga0209275_10721506	Not Available	574	Open in IMG/M
3300027894\|Ga0209068_10033813	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300028769\|Ga0302213_1108055	Not Available	772	Open in IMG/M
3300028769\|Ga0302213_1210827	Not Available	509	Open in IMG/M
3300028780\|Ga0302225_10160220	Not Available	1090	Open in IMG/M
3300028780\|Ga0302225_10221771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	905	Open in IMG/M
3300028785\|Ga0302201_10055806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1933	Open in IMG/M
3300029817\|Ga0247275_1020360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	2120	Open in IMG/M
3300029999\|Ga0311339_10109397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3379	Open in IMG/M
3300030002\|Ga0311350_11799783	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300030054\|Ga0302182_10106105	Not Available	1234	Open in IMG/M
3300030507\|Ga0302192_10151617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1031	Open in IMG/M
3300030520\|Ga0311372_12002839	Not Available	678	Open in IMG/M
3300030737\|Ga0302310_10635904	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300031028\|Ga0302180_10170296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1193	Open in IMG/M
3300031231\|Ga0170824_123278762	Not Available	1295	Open in IMG/M
3300031232\|Ga0302323_100201629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2010	Open in IMG/M
3300031261\|Ga0302140_10254499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1528	Open in IMG/M
3300031720\|Ga0307469_11702559	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	608	Open in IMG/M
3300031823\|Ga0307478_11510552	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032160\|Ga0311301_11020706	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300032898\|Ga0335072_10066862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4741	Open in IMG/M
3300033818\|Ga0334804_106423	Not Available	725	Open in IMG/M
3300034163\|Ga0370515_0291302	Not Available	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.93%
Aquatic	Environmental → Aquatic	44.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.37%
Freshwater	Environmental → Aquatic → Freshwater	40.68%
Peat	Environmental → Terrestrial → Peat	13.56%
Sediment	Environmental → Aquatic → Sediment	3.39%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	40.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.17%
Loam	Environmental → Terrestrial → Soil → Loam	8.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.41%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.54%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.54%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028769	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03880220	2199352024	Soil	MLKFFLGVVITLLVLVFGGLGLALFGFLPTRANQAPPDFEKHIAMSAMDNSVERHAPRLTNPVPPT
JGI12269J14319_101406191	3300001356	Peatlands Soil	MRNFILGIVITILLLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHAPRLNNPVP
JGI12635J15846_101920352	3300001593	Forest Soil	MRNFILGIVITILVLLIVGLGVALLGFVPTNANAAPPKLEQQIAMSALDASMERHA
JGI12635J15846_104437191	3300001593	Forest Soil	MRNFILGVVITILVLLIVGLGAALLGFVPTNANTEPPKLEQQIAMSALDASMERHAPH
JGI12635J15846_107849562	3300001593	Forest Soil	MRNFILGVVITILVLLIVGLGAALLGFIPTNANAEPPKLEQQIAMSALDA
JGI12053J15887_104436652	3300001661	Forest Soil	MRNFILGVVITILVLLIVGLGSALLGFVPTNANTEPPKLEQQIAMSALDASMERHAPHLNNPVPPTDENLIE
Ga0062387_1001673341	3300004091	Bog Forest Soil	MRNFILGIVITILVLLIGSLGLALLGFLPTRANSAPPEIESHIAMSALDNSVERHAPRLNSPVP
Ga0062386_1003599911	3300004152	Bog Forest Soil	MRSFVLGIVLTILVLAIGGLGLALLGFLPTRANSIPSKMERQIVMSALDNSVERHAPRVNNPVPSTDENLIE
Ga0070764_107187642	3300005712	Soil	MRNFVLGIILTLLVLSIGGLGLALLGFLPTRANSTPPDVETHIAMSAVDSS
Ga0075028_1009594522	3300006050	Watersheds	MRNFVLGIIVTVLVLLLGGLGIALLGFLPTRANSTPPATEVHLAMSALDNSV
Ga0075029_1004924901	3300006052	Watersheds	MRNFVLGILFTIVVLALAGIGLALLGFLPTRANTPPPKMEQHIAMSALDNSVDRHAPRTN
Ga0075015_1007079741	3300006102	Watersheds	MRNFILGIVITLVVLVIGGLGLALLGFLPTRANSTPPATEVHLAMSALDNSVERHAAHVNNPVPPTDDN
Ga0116108_10535802	3300009519	Peatland	MRNFILGIVIAILVLLIGSLGLALLGFLPTRANSAPLEMESHIAMSALDNSVERHAPRVN
Ga0116214_10484541	3300009520	Peatlands Soil	MRNFILGIVITILVLLIGSLGLALLGFLPTRANSAPPEMESHIAMSALDNSVERHAPRLNSPVPPTDENLI
Ga0116221_12077222	3300009523	Peatlands Soil	MRNFILGIVITILFLLIGGLGVALLGFVPTNANTAAPKLEKQIAMSALDASMERHAPHLNNPVPPTDE
Ga0116225_14075061	3300009524	Peatlands Soil	MRNFILGIVITILVLLIGSLGLALLGFLPTRANSAAPEMESHIAMSALDNSVERHAPR
Ga0116137_10801702	3300009549	Peatland	MRNFILGMVITILVLLIGGLGLALLGFLPTRANSAPPEMERHIAMSALDNSVERHA
Ga0116114_11426291	3300009630	Peatland	MRNFILGIVITILVLLIGGLGLALLGFLPTRANVAPLEMERHIAMSALDNSV
Ga0116102_10915582	3300009632	Peatland	MRNFILGIVIAILVLLIGSLGLALLGFLPTRANSAPLEMESHIAMSALDNSVERHAPRVNNPVPPSDENLIEG
Ga0116124_12145782	3300009634	Peatland	MRNFILGIVITILVLLIGGLGLALLGFLPTRANSAPPEMERHIAMSALD
Ga0116120_12246951	3300009641	Peatland	MRNFILGIVITILVLLIGGLGLALLGFLPTRANSAPPEMERHIAMSALDNAVE
Ga0116110_12817381	3300009643	Peatland	MRNFILGVVITILVLLIGGLGFALLGFLPTRSNVAPPAMEHHIAMSALDNSVERHAPRVHNPVPPTDENLIEGVK
Ga0116121_12585961	3300009644	Peatland	MRNFILGIVITILVLLIGGLGLALLGFLPTRANSAPPEMERHIAMSALDNAV
Ga0116106_12366491	3300009645	Peatland	MRNFILGIVITVLVLLIGGLGLALLGFLPTRANVAPLEMERHIAMSALDNSVERHAPRLNNPV
Ga0116215_11156102	3300009672	Peatlands Soil	MRSFILGIVITTLVLLIGSLGLALLGFLPTRANTAPPAMEVHIAMSALD
Ga0116223_104873031	3300009839	Peatlands Soil	MRNFILGIVITILVLLIGGLGLALLGFLPTRANVAPSEMEHHIAMSALDNSVERHAPRLNNP
Ga0074045_102209502	3300010341	Bog Forest Soil	MRNFILGIVITILVLLIGGLGLALLGFLPTRANSVPREMERRIAMSALDSS
Ga0074045_107527721	3300010341	Bog Forest Soil	MRNFILGIVITILVLLIGSLGFALLGFLPTRANVAPPRMESHIAMSALDNS
Ga0074044_103178281	3300010343	Bog Forest Soil	MRSFILGIAVTVLVLLLGSLGLVLLGFLPTRANSAPPEMELHLAMSALDNSVDRHAPRLNNPVPPTDETLIAGLKIYTM
Ga0136449_1014188413	3300010379	Peatlands Soil	MRNFILGIVITILVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHAPRLN
Ga0136449_1028294531	3300010379	Peatlands Soil	MGKVILGIVLTIVVLLIGGAGLALLGFMPTRANKQPPDWERHLAMSALDNSVERRAPRVNNPVPPTDENLIAGLKIYT
Ga0137389_101619932	3300012096	Vadose Zone Soil	MRNFILGIVITILVLVIGSLGLALLGFLPTRANSAPPDMEVHIAMSALDNSVDRHAPR
Ga0137388_108397331	3300012189	Vadose Zone Soil	MRGDEMRNFILGVVITILVLLIVSLGAALLGFVPTNANTEPPKLEQQIAMSALDAS
Ga0137362_113952102	3300012205	Vadose Zone Soil	MRGDEMRYFILGVVITILVLLIVSLGAALLGFVPTNANSEPPKLEQQIAMSALDASMERHAPHVNSPVPPTDEN
Ga0137377_104790651	3300012211	Vadose Zone Soil	MRNFILGIVITILVLLIAGLGAALLGFVPTNANTEPPKLEQQIAMSALDASMERHA
Ga0137360_109401321	3300012361	Vadose Zone Soil	MRNFILGIVITILVLVIGGLGLALLGFLPTRANSPPPEMEIHIVMSALDN
Ga0181533_11827962	3300014152	Bog	MRNFILGIIAAVVVLLIAGLGLALLGFLPTRANSAPPKWERHIAMSALDNSVDRHAPRVNSPVPPTDENL
Ga0181524_104829841	3300014155	Bog	MRNFILGMITAIVVLLIGGLGLALLGFLPTRANRVPPKFERHIAMSALDNSVE
Ga0181518_103769131	3300014156	Bog	MRNFILGVVITILVLLIGGLGFALLGFLPTRSNVAPPAMEHHIAMSALDNSVERHAPRLNNPVPPTDENLIAG
Ga0181530_100200151	3300014159	Bog	MRNFILGMVITILVLLIGGLGLALLGFLPTRANSAPPEMERHIAMSALDNSVERHAPRLNSP
Ga0181530_101450391	3300014159	Bog	MRGFILGIFITILVLLIGSLGLALLGFLPTRANSAPPEMERHIAMSALDNS
Ga0181523_104493562	3300014165	Bog	MRNFILGIVVTILVLLIGGLGFALLGFLPTRSNVAPPAMEHHIAMSALDNSVERH
Ga0181534_103131491	3300014168	Bog	MRNFILGIFFTITFLLLAGIGLALLGFLPTRANKSPSKWEGQIAMSALDSSVERHAQRLNNPVAPTDENLI
Ga0187849_12966671	3300017929	Peatland	MRNFILGIVVTILVLLIGGLGLALLGFLPTRANSAPPAMEVQIAMSALDNSVERHAPRVDSPVPPTDENLIEG
Ga0187801_101277602	3300017933	Freshwater Sediment	MRNFILGIVVAILALLMVSLGLALLGFLPTRANRTPPQMEQRIAMSALDNSVDRHAPRVNNPVPPTDENLIEGL
Ga0187801_104424162	3300017933	Freshwater Sediment	MRNFILGIVITFLVLLIGGLGLALLGFLPTRANVAPSEMEHHIAMSALDNSVERHAPRLNNPVPPTDENLIEG
Ga0187803_100003266	3300017934	Freshwater Sediment	MRNFILGIIFTILVLVIGGIGLALLGFLPTRANTAPPPMEVRLAMSALDNSVDRHAPRANNPAPPSDENLIAGLRSTP
Ga0187854_104243891	3300017938	Peatland	MRNFVLGIVITVLVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSV
Ga0187850_100560661	3300017941	Peatland	MRSFILGIVITILVLLIGSLGLALLGFLPTQANIAPPQMEVHIAMSALDSSVERHAPRLNNPVPP
Ga0187850_101560222	3300017941	Peatland	MRNFILGIVIAILVLLIGSLGLALLGFLPTRANSAPLEMESHIAMSALDNSVERHAPRVNNPVPPSD
Ga0187819_103082781	3300017943	Freshwater Sediment	MRNFILGVVITILVLLIGGLGLALLGFLPTRANVAPPEIERHIAMSA
Ga0187879_102985952	3300017946	Peatland	MRNFILVIVFAIVVLLLAGIGLALLGFLPTRANTPPSQTESHFAMSALDSSVDRHAPHMNNPQPPTDE
Ga0187847_100662203	3300017948	Peatland	MRNFVLGIVVTILVLLIGGAGLALLGFLPTRANSTPPQMEVHFAMSA
Ga0187817_102293461	3300017955	Freshwater Sediment	MRNFILGIVITILVLLIGGLGLALLGFLPTRANRTPPKVEQRIAMSALDNSV
Ga0187804_103415321	3300018006	Freshwater Sediment	MRNFILGVVITILVLLIGGLGLALLGFLPTRANIAPSEMEHHIAMSALDNSVERHAPRLNNPVPPTDENLIE
Ga0187888_12066722	3300018008	Peatland	MRSFILGIVITILVLLIGSLGLALLGFLPTQANIAPPQMEVHIAMSALDSSVERHAPRLNNPVP
Ga0187888_12909632	3300018008	Peatland	MRNFILGMVITILVLLIGGLGLALLGFLPTRSNVAPPALERHIAMSALDNSVERH
Ga0187810_101515752	3300018012	Freshwater Sediment	MRNFILGIVITILVLLIVGLGVALLGFAPTNANTAQPKLERQIAM
Ga0187810_102157072	3300018012	Freshwater Sediment	MRNFILGIVITFLVLLIGGLGLALLGFLPTRANVAPSEMEHHIAMSALDNSVERHAPRLNNPVPPTDENLIEGL
Ga0187810_102518261	3300018012	Freshwater Sediment	MRNFILGIVITILVLLIGGLGLALLGFLPTRANTAPPPMEIHIAMSALDNSVERH
Ga0187880_12887182	3300018016	Peatland	MRNFILGIVITVLVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHAPRLN
Ga0187872_100726401	3300018017	Peatland	MRNFILGIVITVLVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHA
Ga0187874_101928561	3300018019	Peatland	MRNFILGIVIAILVLLIGSLGLALLGFLPTRANSAPPKMERHLAMSALDNSVERHAPRVNNPVPPSDENLIEG
Ga0187882_13625932	3300018021	Peatland	MRNFFLGIVVAILVLLIGTLGVALLGFLPTRANSAPPKLERHLAMSALDNSVDRHAPRINNPVPPTDENLIAG
Ga0187864_102631272	3300018022	Peatland	MRNFILGIVITVLVLLIGGLGLALLGFLPTRANVAPPEMERHIAMSALDNSVERHAPRLNSPVP
Ga0187867_107312872	3300018033	Peatland	MRNFFLGMVIAVIVLLIGGAGLALLGFLPTRANVTPPEMERHIAMSALDNSVERHA
Ga0187871_108201982	3300018042	Peatland	MRNFILGIVVTILVVLIGGVGLALLGFLPTRANVAPPEIERHLAMSALDNAVER
Ga0187784_109734912	3300018062	Tropical Peatland	MRNFILGVVITILVLLIGGLGLALLGFLPTRANVAPPEIESHIAMSALDNSVERHAP
Ga0187784_112585971	3300018062	Tropical Peatland	MRNFILGVVITVLVLLIGGLGLALLGFLPTRANLAPSEIESHIAM
Ga0187769_104507561	3300018086	Tropical Peatland	MRNFILGIIFTVLVLVIGGIGLALLGFLPTRANMPPSQTEVHLAMSALDNSVDRHAPRTNNPLALSDE
Ga0187769_107000022	3300018086	Tropical Peatland	MRNFILGIVITILVLLIGGLGLALLGFLPTRSNVAPPAMEQHITMSALDNSVE
Ga0187770_115296931	3300018090	Tropical Peatland	MGKVILGIVLTIVVLLIVGAGLALLGFMPTRANKQPPNWERHLAMSAL
Ga0187852_12508132	3300019082	Peatland	MRNFFLGIVVAILVLLIGTLGVALLGFLPTRANSAPPKLERHLAMSALDNSVDRHAPRINNPVPPTD
Ga0187852_13427152	3300019082	Peatland	MRNFILGVVITILVLLIGGLGFALLGFLPTRSNVAPPAMEHHIAMSALDNSVER
Ga0182031_10288723	3300019787	Bog	MRNFFLGIVVAILVLLIGTLGVALLGFLPTRANSAPPKLERHLAMSALDNSVDRHAPRINNPV
Ga0193728_11268143	3300019890	Soil	MRNFILGIVITILVLLIVGLGVALLGFAPTNADTEPPKLEQQIAMSALDASMERHAPHVNNPVPPTDEIRNGTCFT
Ga0210401_114543901	3300020583	Soil	MRNFILGMVITILVLLIIGLGTALLGFVPTHANAEPPKLEQQIAMSALD
Ga0179596_102391652	3300021086	Vadose Zone Soil	MRNFILGVVITILVLLIVSLGAALLGFVPTNANTEPPKLEQQLTMSAL
Ga0179596_105498552	3300021086	Vadose Zone Soil	MRNFILGIVITILVLVIGGLGFALLGFLPTRANSAPPEMEIHIAMSALDNSVE
Ga0210396_103827552	3300021180	Soil	MRNFILGIVITILVLLIVGLGAGLLGFVPTNADTEPPKLEQQIAMSALDA
Ga0193709_10648171	3300021411	Soil	MRNFILGIVITILVLLIVGLGVALLGFAPTNADTEPPKLEQQIAMSAL
Ga0224558_11065761	3300023090	Soil	MRGFILGIFITILVLLIGSLGLALLGFLPTRANSAPPEMERHIAMSALDNSVERHAPRVH
Ga0208455_10623182	3300025453	Peatland	MRNFILGIVIAILVLLIGSLGLALLGFLPTRANSAPLEMESHIAMSALDNSVERHAPRVNNPVPPSDENLIEGLKIY
Ga0208562_10395331	3300025460	Peatland	MRNFILGIVVTILVLLIGGLGLALLGFLPTRANSAPPAMEVQIAMSALDNSVERHAPRVDSPVPPTDENLI
Ga0208192_10342101	3300025477	Peatland	MRNFILGIVVTILVLLIGGLGLALLGFLPTRANVTPPKMERHIAMSALDNAVERHAPRLNNPVPPTDENLIA
Ga0207646_106191261	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRNFILGIVITILVLLIGGLGLALLGFLPTRANIAPPAMEVQLAMSALDNSVERHAPRVSNPVPPTDE
Ga0209839_100322742	3300026294	Soil	MRNFILGMVVTVLVMLIVGLGFALLGFMPTHANAEPPKLERQIAMSALDASMERHAPRGNNPVPPTNEN
Ga0257158_10354761	3300026515	Soil	MRNFILGIVITILVLLIVGLGVALLGFAPTNADTEPPKLEQQIAMSALDASMERHAPHLNNPVPPTD
Ga0209160_11581331	3300026532	Soil	MRNFILGIVITILVLLIAGLGAALLGFVPTNANTEPPKLEQQIAMSALDASMERHAPHLNNP
Ga0209735_10239461	3300027562	Forest Soil	MRNFILGVVITILALLIAGLGVALLGFVPTNANTPPPKFEEQIAMSALDASMERHAPHLNNPVPPT
Ga0208981_11233342	3300027669	Forest Soil	MRNFILGVVITTLVLLIVGLGAALLGFVPTNANTEPPKLEQQIAMSALDA
Ga0209118_10078556	3300027674	Forest Soil	MRNFILGIVITILVLLIVGLGAVLLGFVPTNANTEPPKLEQQIAMSALDASVER
Ga0209248_101176441	3300027729	Bog Forest Soil	MRNFILGIVVTILVLLIGGLGLALLGFLPTRANSSPPEMESHIAMSALDNSVERHAPRVNNPVPPTDEN
Ga0209180_103830652	3300027846	Vadose Zone Soil	MRNFILGIVTTILVLVIGGLGFALLGFLPTRANSTPPEMEINIAMSALDNSVERHAPRLNNPVPPT
Ga0209275_107215062	3300027884	Soil	MRNFVLGIVVTILALLIGSLGLALLGFLPTRANTIPPQMESHIAMSAMDS
Ga0209068_100338134	3300027894	Watersheds	MRNFIFGVVITSLVLVIGGAGFALLGFIPTNANAAPPKLERQIATSALDASMERHA
Ga0302213_11080552	3300028769	Fen	MRNFVLGIIVTVLIIIVGGAGLALLGFLPTNANTAPPQMERHIAM
Ga0302213_12108272	3300028769	Fen	MRNFILGILFVIAVLVIGAAGLALLGFMPTRANTPPPEMERHLAMSALDNAIDR
Ga0302225_101602202	3300028780	Palsa	MRNFILGIVITIVVLLIGGLGLALLGFLPTRANTDAPALEVHIAMSALDSSVERHAAHLNNPVPP
Ga0302225_102217712	3300028780	Palsa	MRNFILGIVVTILVLVIGGLGIALLGFAPTNSNTSPPKLERQIAMSALDASMERH
Ga0302201_100558061	3300028785	Bog	MAAVGRSLLKGSEMRNFILGIVVTILVLLIGGAGLALLGFLPTRANKTPPEAEVHFAMSALDNSVERHAPRVDNPVP
Ga0247275_10203601	3300029817	Soil	MRNFILGIVVTILVLLIGGLGLALLGFLPTRANSAPPAMEVQIAMSALDNSVERHAPRVDSPVPPT
Ga0311339_101093971	3300029999	Palsa	MRNFILGIVITIVVLLIGGLGLALLGFLPTRANTDAPALEVHIAMSALDSSVERHA
Ga0311350_117997832	3300030002	Fen	MRNFILGILFVIAVLLIGGAGLALLGFMPTRANTPPPEMERHLAMSALDNAIERHAPRANSPVPPSDENLISGMKLY
Ga0302182_101061052	3300030054	Palsa	MRNFILGIVLTIVVLVIGGLGLAVLGFLPTRANVHPPEMESHIAMSALDNSVERHARR
Ga0302192_101516172	3300030507	Bog	MAAVGRSLLKGSEMRNFILGIVVTILVLLIGGVGLALLGFLPTRANKTPPEAEVHFAMSALDNSVERHAPRVDN
Ga0311372_120028391	3300030520	Palsa	MRNFVLGIVVTILVLLIGSLGLALLGFLPTRANTTPPAMESHIAMSA
Ga0302310_106359042	3300030737	Palsa	MRNFILGIVVTILVLVIGGLGIALLGFAPTNSNTSPPKLERQIAMSALDASMERHAPRLNNPVPPTDENLIAVLR
Ga0302180_101702961	3300031028	Palsa	MRNFILGIVVTILVLVIGGLGIALLGFAPTNSNTSPPKLERQIAMSALDASMERHAPRLNNPVPPT
Ga0170824_1232787621	3300031231	Forest Soil	MRNFILGIIITLLVLVFGGIGFALLGFLPTRANVAPPPLESHIGMSALDNSVERHAPRL
Ga0302323_1002016291	3300031232	Fen	MRNFILGILFVIAVLVIGAAGLALLGFMPTRANTPPPEMERHLAMSALDNAIDRHAPRVNNPVPP
Ga0302140_102544991	3300031261	Bog	MAAVGRSLLKGSEMRNFILGIVVTILVLLIGGAGLALLGFLPTRANKTPPEAEVHFAMSALDNSVERHAPRVDNPVPLTDDNL
Ga0307469_117025591	3300031720	Hardwood Forest Soil	MRNFILGIVITILVLVFGGIGFALLGFLPTRANVAPPPMESHIAMSALDNSVERHAPRLNDPVPPTDEN
Ga0307478_115105522	3300031823	Hardwood Forest Soil	MRNFILGVVITILVLLIAGLGTALLGFVPTNANTEPPKLEEQIAMSALDASMERHAPHVNNPVPPTDE
Ga0311301_110207061	3300032160	Peatlands Soil	MRNFILGMVITILLLLIGSLGLALLGFLPTRANSAPPEMESHIAMSALDNSVDRHAPRLNSPVP
Ga0335072_100668626	3300032898	Soil	MGKFVLGIVLTVAVVLLIGAGLALLGFLPTKANRHPPAWEAHFAMSALDNSVDRYAPRVNNPLPPTDENLISGM
Ga0334804_106423_2_166	3300033818	Soil	MRNFILGIVITVLVLLIGSVGVALLGFLPTQANIAPPEMERHIAMSALDNSVERH
Ga0370515_0291302_484_690	3300034163	Untreated Peat Soil	MRNFILGIVLTIVVLVIGGLGLAVLGFLPTRANVRPPEMESHIAMSALDNSVERHARRVDNPVPPTDDN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076579

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences