Metagenome / Metatranscriptome Family F076683

Basic Information
Family ID	F076683
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	42 residues
Representative Sequence	RSLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM
Number of Associated Samples	6
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.02 %
% of genes from short scaffolds (< 2000 bps)	94.02 %
Associated GOLD sequencing projects	6
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Unclassified (97.436 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.79% β-sheet: 0.00% Coil/Unstructured: 58.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01055	Glyco_hydro_31	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1501	Alpha-glucosidase/xylosidase, GH31 family	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
All Organisms	root	All Organisms	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
cellular organisms	root	All Organisms → cellular organisms	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Crustacea	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Multicrustacea	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Hexanauplia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Copepoda	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.44 %
Neocopepoda	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300012687\|Ga0157543_1107983	Not Available	598	Open in IMG/M
3300012732\|Ga0157549_1075770	Not Available	558	Open in IMG/M
3300012753\|Ga0157548_1084861	Not Available	500	Open in IMG/M
3300012786\|Ga0157527_166551	Not Available	575	Open in IMG/M
3300013014\|Ga0164295_10133052	Not Available	1846	Open in IMG/M
3300013014\|Ga0164295_10166252	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1642	Open in IMG/M
3300013014\|Ga0164295_10170553	Not Available	1620	Open in IMG/M
3300013014\|Ga0164295_10187367	Not Available	1542	Open in IMG/M
3300013014\|Ga0164295_10204364	Not Available	1475	Open in IMG/M
3300013014\|Ga0164295_10205323	Not Available	1471	Open in IMG/M
3300013014\|Ga0164295_10210883	Not Available	1451	Open in IMG/M
3300013014\|Ga0164295_10218213	Not Available	1426	Open in IMG/M
3300013014\|Ga0164295_10223529	Not Available	1408	Open in IMG/M
3300013014\|Ga0164295_10236442	Not Available	1368	Open in IMG/M
3300013014\|Ga0164295_10237374	Not Available	1365	Open in IMG/M
3300013014\|Ga0164295_10240491	Not Available	1356	Open in IMG/M
3300013014\|Ga0164295_10264493	Not Available	1292	Open in IMG/M
3300013014\|Ga0164295_10271724	Not Available	1274	Open in IMG/M
3300013014\|Ga0164295_10333725	All Organisms → cellular organisms → Eukaryota	1147	Open in IMG/M
3300013014\|Ga0164295_10339181	Not Available	1137	Open in IMG/M
3300013014\|Ga0164295_10365017	Not Available	1095	Open in IMG/M
3300013014\|Ga0164295_10368275	Not Available	1090	Open in IMG/M
3300013014\|Ga0164295_10369996	Not Available	1088	Open in IMG/M
3300013014\|Ga0164295_10382407	Not Available	1069	Open in IMG/M
3300013014\|Ga0164295_10418677	Not Available	1021	Open in IMG/M
3300013014\|Ga0164295_10447457	Not Available	987	Open in IMG/M
3300013014\|Ga0164295_10458866	Not Available	974	Open in IMG/M
3300013014\|Ga0164295_10470783	Not Available	961	Open in IMG/M
3300013014\|Ga0164295_10471908	Not Available	960	Open in IMG/M
3300013014\|Ga0164295_10481773	Not Available	950	Open in IMG/M
3300013014\|Ga0164295_10508057	Not Available	924	Open in IMG/M
3300013014\|Ga0164295_10522046	Not Available	911	Open in IMG/M
3300013014\|Ga0164295_10533148	Not Available	901	Open in IMG/M
3300013014\|Ga0164295_10548964	Not Available	888	Open in IMG/M
3300013014\|Ga0164295_10550532	Not Available	886	Open in IMG/M
3300013014\|Ga0164295_10563964	Not Available	875	Open in IMG/M
3300013014\|Ga0164295_10589914	Not Available	855	Open in IMG/M
3300013014\|Ga0164295_10601103	Not Available	847	Open in IMG/M
3300013014\|Ga0164295_10603001	Not Available	846	Open in IMG/M
3300013014\|Ga0164295_10610398	Not Available	840	Open in IMG/M
3300013014\|Ga0164295_10617683	Not Available	835	Open in IMG/M
3300013014\|Ga0164295_10619425	Not Available	834	Open in IMG/M
3300013014\|Ga0164295_10646351	Not Available	816	Open in IMG/M
3300013014\|Ga0164295_10660822	Not Available	806	Open in IMG/M
3300013014\|Ga0164295_10670599	Not Available	800	Open in IMG/M
3300013014\|Ga0164295_10677244	Not Available	796	Open in IMG/M
3300013014\|Ga0164295_10677614	Not Available	796	Open in IMG/M
3300013014\|Ga0164295_10695350	Not Available	785	Open in IMG/M
3300013014\|Ga0164295_10702590	Not Available	781	Open in IMG/M
3300013014\|Ga0164295_10708493	Not Available	777	Open in IMG/M
3300013014\|Ga0164295_10711636	Not Available	775	Open in IMG/M
3300013014\|Ga0164295_10733744	Not Available	763	Open in IMG/M
3300013014\|Ga0164295_10735020	Not Available	762	Open in IMG/M
3300013014\|Ga0164295_10739986	Not Available	760	Open in IMG/M
3300013014\|Ga0164295_10782341	Not Available	738	Open in IMG/M
3300013014\|Ga0164295_10782781	Not Available	738	Open in IMG/M
3300013014\|Ga0164295_10795039	Not Available	732	Open in IMG/M
3300013014\|Ga0164295_10816373	Not Available	722	Open in IMG/M
3300013014\|Ga0164295_10825633	Not Available	718	Open in IMG/M
3300013014\|Ga0164295_10846942	Not Available	708	Open in IMG/M
3300013014\|Ga0164295_10864607	Not Available	700	Open in IMG/M
3300013014\|Ga0164295_10869272	Not Available	698	Open in IMG/M
3300013014\|Ga0164295_10899511	Not Available	686	Open in IMG/M
3300013014\|Ga0164295_10902173	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	685	Open in IMG/M
3300013014\|Ga0164295_10902788	Not Available	685	Open in IMG/M
3300013014\|Ga0164295_10908611	Not Available	682	Open in IMG/M
3300013014\|Ga0164295_10911716	Not Available	681	Open in IMG/M
3300013014\|Ga0164295_10913545	Not Available	680	Open in IMG/M
3300013014\|Ga0164295_10949534	Not Available	667	Open in IMG/M
3300013014\|Ga0164295_10978710	Not Available	656	Open in IMG/M
3300013014\|Ga0164295_11000816	Not Available	648	Open in IMG/M
3300013014\|Ga0164295_11014855	Not Available	644	Open in IMG/M
3300013014\|Ga0164295_11023566	Not Available	641	Open in IMG/M
3300013014\|Ga0164295_11024587	Not Available	640	Open in IMG/M
3300013014\|Ga0164295_11028914	Not Available	639	Open in IMG/M
3300013014\|Ga0164295_11059292	Not Available	629	Open in IMG/M
3300013014\|Ga0164295_11078139	Not Available	623	Open in IMG/M
3300013014\|Ga0164295_11103394	Not Available	616	Open in IMG/M
3300013014\|Ga0164295_11144812	Not Available	604	Open in IMG/M
3300013014\|Ga0164295_11169398	Not Available	597	Open in IMG/M
3300013014\|Ga0164295_11169461	Not Available	597	Open in IMG/M
3300013014\|Ga0164295_11170225	Not Available	597	Open in IMG/M
3300013014\|Ga0164295_11171420	Not Available	597	Open in IMG/M
3300013014\|Ga0164295_11179210	Not Available	594	Open in IMG/M
3300013014\|Ga0164295_11181279	Not Available	594	Open in IMG/M
3300013014\|Ga0164295_11189255	Not Available	592	Open in IMG/M
3300013014\|Ga0164295_11192645	Not Available	591	Open in IMG/M
3300013014\|Ga0164295_11210559	Not Available	586	Open in IMG/M
3300013014\|Ga0164295_11232525	Not Available	581	Open in IMG/M
3300013014\|Ga0164295_11234051	Not Available	580	Open in IMG/M
3300013014\|Ga0164295_11255176	Not Available	575	Open in IMG/M
3300013014\|Ga0164295_11268439	Not Available	572	Open in IMG/M
3300013014\|Ga0164295_11269457	Not Available	572	Open in IMG/M
3300013014\|Ga0164295_11302338	Not Available	564	Open in IMG/M
3300013014\|Ga0164295_11313174	Not Available	561	Open in IMG/M
3300013014\|Ga0164295_11345509	Not Available	554	Open in IMG/M
3300013014\|Ga0164295_11348247	Not Available	554	Open in IMG/M
3300013014\|Ga0164295_11371106	Not Available	549	Open in IMG/M
3300013014\|Ga0164295_11388443	Not Available	545	Open in IMG/M
3300013014\|Ga0164295_11430556	Not Available	536	Open in IMG/M
3300013014\|Ga0164295_11468018	Not Available	529	Open in IMG/M
3300013014\|Ga0164295_11495060	Not Available	524	Open in IMG/M
3300013014\|Ga0164295_11525321	Not Available	518	Open in IMG/M
3300013014\|Ga0164295_11527570	Not Available	518	Open in IMG/M
3300013014\|Ga0164295_11531849	Not Available	517	Open in IMG/M
3300013014\|Ga0164295_11561228	Not Available	512	Open in IMG/M
3300013014\|Ga0164295_11574951	Not Available	510	Open in IMG/M
3300013014\|Ga0164295_11626556	Not Available	501	Open in IMG/M
3300016693\|Ga0180038_1081603	Not Available	719	Open in IMG/M
3300016693\|Ga0180038_1143173	Not Available	555	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	100.00%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300012687	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES032 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012732	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES039 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012753	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES038 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012786	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES010 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300016693	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES036 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0157543_11079831	3300012687	Freshwater	PLRQFDRRSLAEFNRTVSTIGHTLNMVFYNLKSQGPLKPAENIAEM*
Ga0157549_10757701	3300012732	Freshwater	YVVDSPLRQVDQQSLARFNQTASKIGHKPKTAPYYSRSQGPLKEAKNIAEM*
Ga0157548_10848611	3300012753	Freshwater	QFDQRSLARFSRTVSRIGQALETVVCSLESQGPLKHAGGIAEM*
Ga0157527_1665511	3300012786	Freshwater	MTLIMCVHSPLRQFDQRSLARFNQTVSRIGHTLETVFYNLGSQGPLKEARGIA
Ga0164295_101330521	3300013014	Freshwater	SAAFNQTVTKIGHTLKPVFYSLKSQGPLKNAKNIAEM
Ga0164295_101662521	3300013014	Freshwater	SPLRQFDQRSLARFNQTVNKIGHTQKTVFYSLKSQGPIKQAKNIAEM*
Ga0164295_101705532	3300013014	Freshwater	FNQTVSKIGHTLKTVFYNLKSQGPLTHAKNIAEM
Ga0164295_101873671	3300013014	Freshwater	FNHAVSKIGHALKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_102043643	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHMLKTVFYNLKSQGPLKHAQNIAEI*
Ga0164295_102053231	3300013014	Freshwater	SAARFNQTVTKIGHTLKPVFYDLKSQGPLKNAKNIGEK*
Ga0164295_102108834	3300013014	Freshwater	IHVVDSLLRQFDQRSLARFNQTVIKIGHTLKTIFYNLKSQGPLKHAKNIAEM*
Ga0164295_102182131	3300013014	Freshwater	SAAFNQAVTKIGHMLKQVFYDLKGQVPLKNAKNIAEM
Ga0164295_102235291	3300013014	Freshwater	STLSLARFNQTVSKIGHMLKTVFYNLKSQGPLKHAKTIAEM*
Ga0164295_102364421	3300013014	Freshwater	LARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_102373742	3300013014	Freshwater	PLQFDQRSLARFNEAVSKMGHTLKTVFYNLKSQGPLKEAKNIAEM
Ga0164295_102404911	3300013014	Freshwater	TPLQQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKEAQNIAEM*
Ga0164295_102644931	3300013014	Freshwater	QRSLARFNQTVSKIGHTLKTVFYNLKSQGALKNAKNIAEM*
Ga0164295_102717242	3300013014	Freshwater	VDSPLRQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQAPLKHAKNIAEM*
Ga0164295_103337251	3300013014	Freshwater	SAVRFNQTVTKIGHTLKPVFYDLKSQGSLKNAKNIAEM*
Ga0164295_103391811	3300013014	Freshwater	SPLRQFYQRSLARFNQTVSKIGHTLKTVFYNLKSQGPSKHAKNIAEM*
Ga0164295_103650171	3300013014	Freshwater	LIYQAVTKIGHTLKPVFYDLKSQGPLKNAKNIAEM*
Ga0164295_103682751	3300013014	Freshwater	AESLRSAAFNQAVTKIGHTLKPVFYSLKSQGPLKHAKNIAEM
Ga0164295_103699962	3300013014	Freshwater	LARFNQNVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_103824071	3300013014	Freshwater	DQQSFAQFNQTVSKMEHTLKTVLYNLKSQGPLKHKKNIAEM*
Ga0164295_104186772	3300013014	Freshwater	DQRSLAQFNQTVSKIGHTLKTVFYNLKSQGPLKQAKHIAEM*
Ga0164295_104474573	3300013014	Freshwater	ARFNQTVTKIGHTLKPVFYTLKSQGPLKNAKNIAEM*
Ga0164295_104588662	3300013014	Freshwater	YVVDSPLRQFDQRSLAQFNQTVSKMGHALKTVFYNLMSQGPLKHAKNIAEM*
Ga0164295_104707831	3300013014	Freshwater	RSAAQFNQTVTKIGHTLKPVFYDLKSQGPLKNAKSIAEM*
Ga0164295_104719081	3300013014	Freshwater	ATRFNQVVTKIGHTLKPVFYDLKSQGPLKNVKNIAKM*
Ga0164295_104817731	3300013014	Freshwater	LRSATRFNQAVTKIGHTLKPVFYSLKSQGPLKNAKNIAEM*
Ga0164295_105080571	3300013014	Freshwater	SLARFNQTVSKIGHTLKTVFYNLKSQGPLKEAKNIAEM*
Ga0164295_105084491	3300013014	Freshwater	SAASNQTVTKIGHTLKPVFLNLKSQGPLKEAKNIAEM
Ga0164295_105220462	3300013014	Freshwater	FNQTVNKIGHTLKLVFYDLKSQGPLKNAKNIAEM*
Ga0164295_105331481	3300013014	Freshwater	LARFNQTVSKIGHTLKTVFYNLKSQGALKNARNIAEM*
Ga0164295_105489641	3300013014	Freshwater	QLIHVVDSPLRQFDQRSLARFNQTVRKIGHSLKTVFYNLKSQRPLRHAKNIAEI*
Ga0164295_105505322	3300013014	Freshwater	FNQTVTKIGHTLKPVFYDLKSQGPLKNAKNIAEM*
Ga0164295_105639641	3300013014	Freshwater	LRSATRFNQAVTKIGHTLKPVFYSLKSQGPLKNAKNIAEMYVKPIPIE*
Ga0164295_105899141	3300013014	Freshwater	DSPLQQFDQRSLARFNQTVSKIGHTLKTFFYDLKSQGPLKKR*
Ga0164295_106011031	3300013014	Freshwater	RQFDQRSLAFNQTVSKIGHTLKTGFYNLKGQGPLKHAKSIAEM
Ga0164295_106012481	3300013014	Freshwater	SNQTVTKIGHTLKPVFLNLKSQGPLKEAKNIAEM*
Ga0164295_106030011	3300013014	Freshwater	HVVDSPLRQFDQRGLARFNQTVSKIGHMLKTVYYNLKSQGPLKHAKNIAEM*
Ga0164295_106103981	3300013014	Freshwater	QSTTTVLQSAAQFNQTVTKIGHTLKPVFNDLKSQGPLKKAKNIAEM
Ga0164295_106176831	3300013014	Freshwater	FNQTVTKIRHTLKPVFYDLKSQGPLKNAKNIAEM*
Ga0164295_106194252	3300013014	Freshwater	QRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKEATNIAEM*
Ga0164295_106463511	3300013014	Freshwater	ARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNMAECGLNQYL*
Ga0164295_106608221	3300013014	Freshwater	SAAFNQAVTKIGHTLKPVFYSLKSQGPLKNAKNIAEM
Ga0164295_106705991	3300013014	Freshwater	FNQTVTKIGHMLKPVFYNLKSQGPLKNAKNIAEM*
Ga0164295_106772441	3300013014	Freshwater	RSLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_106776141	3300013014	Freshwater	YIVETPLQQFDQQSAAFNQTVSKIGHALKPIFYNLKSKGLLKKAENIAEM
Ga0164295_106953501	3300013014	Freshwater	FDQRSLARFNQAVSKIGHTLNTVFHILKSQGPLKNAKNIAEM*
Ga0164295_107025901	3300013014	Freshwater	IYVVDSPLRQFDQRSLARFNQTVSKIGYTLKTVFYNLKRQGPLKHAKNFAEM*
Ga0164295_107084931	3300013014	Freshwater	RFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_107116361	3300013014	Freshwater	FDQRSLARFNQTVSKIGHTLKTVFYNLKSHGPLKEAKNIAEM*
Ga0164295_107337441	3300013014	Freshwater	HVVDSPLRQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIA*
Ga0164295_107350201	3300013014	Freshwater	RSLARFNQTVRKIGYTLKTVFYTLKRQDPLKHAKNFAEM*
Ga0164295_107399861	3300013014	Freshwater	LIHVVDSPLRQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQRPLKHVKNIAEK*
Ga0164295_107823411	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHTLKTVSYNLKSQGPLTHVNNIAEM*
Ga0164295_107827812	3300013014	Freshwater	DSPLRQFDQWSLARLNQAVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_107950391	3300013014	Freshwater	RQFDQRSLAQFNQTVRKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_108163731	3300013014	Freshwater	RSLARFNQTVSKIGHTLKTFFYNLKSQGPLKEAKNIAEM*
Ga0164295_108253971	3300013014	Freshwater	FNQAVTKRGPNLKPVFYKLKSQGVLKDAKNTAEM
Ga0164295_108256331	3300013014	Freshwater	PLRQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPFKEAKNIAEM*
Ga0164295_108469421	3300013014	Freshwater	HVVDSPLRQFDQRSLARFNQTVSKIGHKLKTVFYNLESQGPLKHAKNIAEM*
Ga0164295_108646071	3300013014	Freshwater	ARFNQTVTKIGHTLKPVFYDLKSQGPLKNAKNIAEM*
Ga0164295_108692721	3300013014	Freshwater	SAAFNQAVTKIGHTLKPVFYNLKSQGPLKHAKNIAEM
Ga0164295_108995111	3300013014	Freshwater	LQQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKDAKNIAEM*
Ga0164295_109021731	3300013014	Freshwater	FMLLTVLRQFDQRSLARFNQTVSKIGHTLKTVFNNLKSQGPLKHAKNIAEM*
Ga0164295_109027881	3300013014	Freshwater	FNQTVTKIGYTLKPVFYNLKSQGPLKHAKNIAEM*
Ga0164295_109086111	3300013014	Freshwater	FNQTVTKIGHTLKPFFYDLKSQGPLKNAKNIAEM*
Ga0164295_109117162	3300013014	Freshwater	QFDQPSLAFNQTVSKIGHTLKTVFYNLKSQGLFKHAKNIAEM
Ga0164295_109135451	3300013014	Freshwater	QRSLARFNQTVSKIRHTLKTVFYNLKSQGPLKHAKNIADM*
Ga0164295_109495341	3300013014	Freshwater	ARFNQTVSKIGHTLKTVFYNLKSQGPLKEAKNIAEM*
Ga0164295_109787102	3300013014	Freshwater	LARFNQTVSKIGHTLKTVFYNLKSQGPVKHAKNIAEM*
Ga0164295_109821761	3300013014	Freshwater	FDQRSLARFNQTVSKIGYTLKMVFYKLKSQGPLKHAKNIAEM*
Ga0164295_110008162	3300013014	Freshwater	TLILCVRSPQRQFEQWSLARFNQTVRLIGNTLKTVFYNLKSQGPLKHTKNIAEM*
Ga0164295_110148551	3300013014	Freshwater	RQFDQWSLARFNQTVSKIGHTLKTVFYNLKSHGPLKQAKNIVEI*
Ga0164295_110235661	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHTLKTVFYYLKSQGPLKHAKNNAEM*
Ga0164295_110245871	3300013014	Freshwater	MTLIMCVHSPLRQFDQRSLARFNQTVSKIGHTLITVFYNLKSQGPLKEAKNIAEM*
Ga0164295_110289141	3300013014	Freshwater	RSATRFNQVVTKIGHTLKPVFYDLKSQGPLKNAKNIAEMKVEPIPIE*
Ga0164295_110592921	3300013014	Freshwater	ARFNQTVSKIGHTLKMVFYNLKSQGPLKHAKNIAEM*
Ga0164295_110781391	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHTLKTVFYDLKSQVPLKNAKNIAEM*
Ga0164295_111033941	3300013014	Freshwater	HVVDSPLRQFDQRSLARFNQTVSKIGHTLKTVFYCLKSQGPLKYAKNIAEM*
Ga0164295_111272251	3300013014	Freshwater	RFNQTVSKIGHTLKTVFYKLKSQGPLKHAKNIPEM*
Ga0164295_111448121	3300013014	Freshwater	RFNQTVSKIGHTLKPVFYDLKSQGPLKNAKNIAEM*
Ga0164295_111693982	3300013014	Freshwater	DQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKQAKNIAEM*
Ga0164295_111694612	3300013014	Freshwater	SLARFNQAVSKIGHTLKPAFYNLKRQGPLKHAKNIAEM*
Ga0164295_111702251	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_111714201	3300013014	Freshwater	RSLARFNQTVSKIGHTLKTVFYNLKSQGPLKEDKNNAEM*
Ga0164295_111792101	3300013014	Freshwater	QFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEMYT*
Ga0164295_111812791	3300013014	Freshwater	SLARFNQTVSKIRHTLKTVLYDLKSQGPLKHAKNIAEM*
Ga0164295_111892552	3300013014	Freshwater	ARFNQTVSKIGQTLKTVFYNLKSQGPLKEAKNIRPN*
Ga0164295_111926451	3300013014	Freshwater	LRQFDQRSLAHFNQTVSKIGHTLKMVFYNLKSQGPLKHAKNIAEM*
Ga0164295_112105591	3300013014	Freshwater	CSLIYQAVTKIGHTLKQVFYNLKSQGPLKHAKNIAEM*
Ga0164295_112325251	3300013014	Freshwater	LARFNQTVSKIGHMLKTVFYNLKSQGHLKHAKNIAEM*
Ga0164295_112340512	3300013014	Freshwater	INQTVSKIVHTLKTVFYNLKSQGPLKEAKNIAEM*
Ga0164295_112551761	3300013014	Freshwater	LFNQTYSKIGHRLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_112684391	3300013014	Freshwater	RCLLRQFDQRSLARFNQTVSKIGHTLKTVFYNLKSQGPLIEAKNIAEM*
Ga0164295_112694571	3300013014	Freshwater	ARFNQTVSKIRHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_112877481	3300013014	Freshwater	SAASNQTVTKIGQTLKPVFLNLKSQGPLKEVKNIAEM
Ga0164295_113023381	3300013014	Freshwater	SATRFNQAVTKIGHTLNPVFYDLKSQVPLKNAKNIAEM*
Ga0164295_113131741	3300013014	Freshwater	DSLLRQFDQQSLARFNQTVSKIRHMLKTVFLQLKGSGPFKKNAKNIAEM*
Ga0164295_113455091	3300013014	Freshwater	QFDQRSLARFNQTVSTIGHTLKTVFYNLKSQGPLKHAKNIMEM*
Ga0164295_113482471	3300013014	Freshwater	ATRFNQVVTKIGHTLKLVFYDLKSQGPFKNVKNIAQM*
Ga0164295_113711062	3300013014	Freshwater	RFNQAVSKIRHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_113884431	3300013014	Freshwater	FNQTVTKIGHTLKPVFYNLKSQGPLKNAKNIAEMYS*
Ga0164295_114305561	3300013014	Freshwater	FDQRSLARFNQTVSKIGHMLKTVFYNLKSQGPLKHA*
Ga0164295_114680181	3300013014	Freshwater	FNQAVTKIGHTLKLVFYNLKSQGPLKHVKNIAEM*
Ga0164295_114950602	3300013014	Freshwater	RFNQTVTKIGHTLKPVFYNLKSQGPLKNARNIAEM*
Ga0164295_115163691	3300013014	Freshwater	LRQFDQRSLALFNQTVSKIGHTLKTYFYNLKRQGPLKHAKNIAEM*
Ga0164295_115253211	3300013014	Freshwater	FNQAVTKIGHTLKLVFYNLKSQGALKNAKNIVEM*
Ga0164295_115275702	3300013014	Freshwater	SLARFNQTVSKIGHTLKTVFYNLKSQGPLKHAKNIAEM*
Ga0164295_115318491	3300013014	Freshwater	RFNQTVSKIGHMLKTVFYNLMSQGPLKNAKNIVEM*
Ga0164295_115612281	3300013014	Freshwater	ATRFNQMVTKIGHTLKLVFYDLKSQGPLKNAKNIAEM*
Ga0164295_115749512	3300013014	Freshwater	QRSLARFNQTVSKIGHTLKTVFYNLKSQGPEKHAKNIAEM*
Ga0164295_116265561	3300013014	Freshwater	PLQQFDQRSLARFNQTVSKIGYTLKTVFYNFKSQGPLKEAKNIAEM*
Ga0180038_10816031	3300016693	Freshwater	PLQQFDQRSLAQFNQTVSKIGHILKTVFYDLKSQGPLKLAGDIAEM
Ga0180038_11431731	3300016693	Freshwater	RSLARFNQAVSKIGHTLKTAFFNLKSQGPLKNAKNIAEM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076683

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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