Metagenome / Metatranscriptome Family F076723

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	102 residues
Representative Sequence	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Number of Associated Samples	70
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.65 %
% of genes near scaffold ends (potentially truncated)	31.62 %
% of genes from short scaffolds (< 2000 bps)	70.94 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (75.214 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.769 % of family members)
Environment Ontology (ENVO)	Unclassified (47.009 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.04% β-sheet: 16.30% Coil/Unstructured: 66.67%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00534	Glycos_transf_1	19.66
PF13692	Glyco_trans_1_4	3.42
PF13578	Methyltransf_24	3.42
PF04989	CmcI	1.71

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3510	Cephalosporin hydroxylase	Defense mechanisms [V]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
All Organisms	root	All Organisms	24.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
cellular organisms	root	All Organisms → cellular organisms	23.93 %
Viruses	superkingdom	All Organisms → Viruses	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	11.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	11.97 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.56 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.97 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.56 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.97 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2.56 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.97 %
Amycolatopsis alkalitolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alkalitolerans	2.56 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1013164	Not Available	1291	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1001390	Not Available	3538	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1002115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	2813	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1004216	Not Available	2030	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1007994	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1025974	Not Available	821	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1028909	Not Available	776	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1032251	Not Available	734	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1035736	Not Available	698	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1063342	Not Available	581	Open in IMG/M
3300004091\|Ga0062387_101468105	Not Available	545	Open in IMG/M
3300004092\|Ga0062389_103755253	Not Available	570	Open in IMG/M
3300004629\|Ga0008092_11342872	Not Available	509	Open in IMG/M
3300005534\|Ga0070735_10531376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300005764\|Ga0066903_106206564	Not Available	625	Open in IMG/M
3300010043\|Ga0126380_10120079	Not Available	1621	Open in IMG/M
3300010048\|Ga0126373_10002043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14724	Open in IMG/M
3300010048\|Ga0126373_10020669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alkalitolerans	5563	Open in IMG/M
3300010048\|Ga0126373_10134040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2335	Open in IMG/M
3300010048\|Ga0126373_10143238	Not Available	2263	Open in IMG/M
3300010048\|Ga0126373_10159280	Not Available	2154	Open in IMG/M
3300010048\|Ga0126373_10183751	Not Available	2014	Open in IMG/M
3300010048\|Ga0126373_10209656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1894	Open in IMG/M
3300010048\|Ga0126373_10390160	Not Available	1414	Open in IMG/M
3300010048\|Ga0126373_11767206	Not Available	682	Open in IMG/M
3300010048\|Ga0126373_12489278	Not Available	577	Open in IMG/M
3300010343\|Ga0074044_10655262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300010361\|Ga0126378_10026960	Not Available	5080	Open in IMG/M
3300010361\|Ga0126378_10241596	Not Available	1897	Open in IMG/M
3300010361\|Ga0126378_10598967	Not Available	1216	Open in IMG/M
3300010361\|Ga0126378_10864386	Not Available	1012	Open in IMG/M
3300010361\|Ga0126378_10901068	Not Available	991	Open in IMG/M
3300010361\|Ga0126378_11283918	Not Available	827	Open in IMG/M
3300010362\|Ga0126377_12351177	Not Available	609	Open in IMG/M
3300010366\|Ga0126379_12965427	Not Available	568	Open in IMG/M
3300010371\|Ga0134125_12072702	Not Available	618	Open in IMG/M
3300010376\|Ga0126381_100019213	Not Available	7955	Open in IMG/M
3300010376\|Ga0126381_100255946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2375	Open in IMG/M
3300010376\|Ga0126381_101003000	Not Available	1205	Open in IMG/M
3300010376\|Ga0126381_102417496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300010396\|Ga0134126_10140115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2940	Open in IMG/M
3300012971\|Ga0126369_10050429	Not Available	3553	Open in IMG/M
3300012971\|Ga0126369_11166169	Not Available	860	Open in IMG/M
3300016294\|Ga0182041_10119299	Not Available	1977	Open in IMG/M
3300016319\|Ga0182033_10077590	Not Available	2365	Open in IMG/M
3300016371\|Ga0182034_10072088	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300016387\|Ga0182040_11893194	Not Available	511	Open in IMG/M
3300016422\|Ga0182039_10158839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1761	Open in IMG/M
3300016445\|Ga0182038_10028947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	3456	Open in IMG/M
3300017939\|Ga0187775_10528285	Not Available	506	Open in IMG/M
3300017966\|Ga0187776_10008247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alkalitolerans	5533	Open in IMG/M
3300020579\|Ga0210407_10853750	Not Available	700	Open in IMG/M
3300021170\|Ga0210400_10717038	Not Available	822	Open in IMG/M
3300021180\|Ga0210396_10061670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3421	Open in IMG/M
3300021403\|Ga0210397_10462615	Not Available	956	Open in IMG/M
3300021407\|Ga0210383_10114271	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300021407\|Ga0210383_10293303	Not Available	1398	Open in IMG/M
3300021478\|Ga0210402_10642751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300021478\|Ga0210402_11731261	Not Available	551	Open in IMG/M
3300021559\|Ga0210409_10178167	Not Available	1942	Open in IMG/M
3300021560\|Ga0126371_10018977	Not Available	6326	Open in IMG/M
3300021560\|Ga0126371_10107216	Not Available	2794	Open in IMG/M
3300021560\|Ga0126371_10165670	Not Available	2283	Open in IMG/M
3300021560\|Ga0126371_10254323	Not Available	1872	Open in IMG/M
3300021560\|Ga0126371_10307656	Not Available	1713	Open in IMG/M
3300021560\|Ga0126371_10328363	Not Available	1661	Open in IMG/M
3300021560\|Ga0126371_10440891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1447	Open in IMG/M
3300021560\|Ga0126371_11427001	Not Available	822	Open in IMG/M
3300021560\|Ga0126371_13841453	Not Available	506	Open in IMG/M
3300024283\|Ga0247670_1062424	Not Available	675	Open in IMG/M
3300026508\|Ga0257161_1000494	Not Available	9574	Open in IMG/M
3300027874\|Ga0209465_10309871	Not Available	791	Open in IMG/M
3300027986\|Ga0209168_10549702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300031543\|Ga0318516_10005100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5930	Open in IMG/M
3300031543\|Ga0318516_10234068	Not Available	1062	Open in IMG/M
3300031543\|Ga0318516_10579331	Not Available	641	Open in IMG/M
3300031544\|Ga0318534_10128103	Not Available	1460	Open in IMG/M
3300031572\|Ga0318515_10411464	Not Available	724	Open in IMG/M
3300031573\|Ga0310915_10255580	Not Available	1233	Open in IMG/M
3300031719\|Ga0306917_10766032	Not Available	757	Open in IMG/M
3300031724\|Ga0318500_10729685	Not Available	506	Open in IMG/M
3300031736\|Ga0318501_10436980	Not Available	709	Open in IMG/M
3300031751\|Ga0318494_10578341	Not Available	656	Open in IMG/M
3300031771\|Ga0318546_10066328	Not Available	2293	Open in IMG/M
3300031777\|Ga0318543_10054203	Not Available	1644	Open in IMG/M
3300031778\|Ga0318498_10346747	Not Available	663	Open in IMG/M
3300031792\|Ga0318529_10030464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2232	Open in IMG/M
3300031796\|Ga0318576_10294175	Not Available	767	Open in IMG/M
3300031835\|Ga0318517_10208300	Not Available	881	Open in IMG/M
3300031859\|Ga0318527_10176507	Not Available	901	Open in IMG/M
3300031879\|Ga0306919_10058774	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300031880\|Ga0318544_10307221	Not Available	615	Open in IMG/M
3300031890\|Ga0306925_10717745	Not Available	1044	Open in IMG/M
3300031912\|Ga0306921_12498098	Not Available	536	Open in IMG/M
3300031954\|Ga0306926_10048141	Not Available	5088	Open in IMG/M
3300031981\|Ga0318531_10049973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1773	Open in IMG/M
3300031981\|Ga0318531_10368768	Not Available	649	Open in IMG/M
3300031981\|Ga0318531_10389180	Not Available	631	Open in IMG/M
3300032008\|Ga0318562_10491416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300032008\|Ga0318562_10793408	Not Available	542	Open in IMG/M
3300032035\|Ga0310911_10013207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis alkalitolerans	3820	Open in IMG/M
3300032090\|Ga0318518_10624011	Not Available	549	Open in IMG/M
3300032091\|Ga0318577_10548805	Not Available	550	Open in IMG/M
3300032805\|Ga0335078_11614146	Not Available	717	Open in IMG/M
3300032829\|Ga0335070_10231932	Not Available	1820	Open in IMG/M
3300032893\|Ga0335069_10356892	Not Available	1726	Open in IMG/M
3300032895\|Ga0335074_10116113	Not Available	3482	Open in IMG/M
3300032895\|Ga0335074_10247287	All Organisms → Viruses → Predicted Viral	2104	Open in IMG/M
3300032895\|Ga0335074_10307414	Not Available	1805	Open in IMG/M
3300032898\|Ga0335072_10028915	All Organisms → cellular organisms → Bacteria	7715	Open in IMG/M
3300032898\|Ga0335072_10189111	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300032898\|Ga0335072_10486727	Not Available	1284	Open in IMG/M
3300032898\|Ga0335072_10538262	Not Available	1196	Open in IMG/M
3300032898\|Ga0335072_10965692	Not Available	787	Open in IMG/M
3300032955\|Ga0335076_11266065	Not Available	622	Open in IMG/M
3300033134\|Ga0335073_11112371	Not Available	803	Open in IMG/M
3300033134\|Ga0335073_11497028	Not Available	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.29%
Aquatic	Environmental → Aquatic	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.29%
Freshwater	Environmental → Aquatic → Freshwater	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	1.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10131642	3300000579	Forest Soil	MPIGMQSSAPARVERLMINLDTMMPMVCGWDECDRRARTPYQVRVHEHPGRCNSPAARYGRHSHYVFCSERHLLYWVYSSGANAHEAAARNRGRIYGQLPEGLRNRI*
AP72_2010_repI_A100DRAFT_10013905	3300000837	Forest Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDECDRPARTPYQVRIHEHVSSCNSEIAQYGRHSHHVFCCNDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRFR*
AP72_2010_repI_A100DRAFT_10021154	3300000837	Forest Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDECDRPARTPYQVRIHEHVGSCNSQVAQYGRHVHHVFCCEDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRFR*
AP72_2010_repI_A100DRAFT_10042167	3300000837	Forest Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDECDRPARTPYQVRIHEHVGSCNSEIAQYGRHSHHVFCCNDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRL
AP72_2010_repI_A100DRAFT_10079943	3300000837	Forest Soil	MINLDTQMPMVCGWDECDRMARTPYQVRIHEHVGRCNSELAQYGRHAHHVFCCEDHLLFWVSCSGDNAMEMAARHQGRIRGYLPEGQRLGRFR*
AP72_2010_repI_A100DRAFT_10259741	3300000837	Forest Soil	MINLDTQMPMVCGWDECDRLARTPYQVRIHEHVGSCNSEIAQYGRHSHHVFCCNDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRFR*
AP72_2010_repI_A100DRAFT_10289092	3300000837	Forest Soil	MINLDTQMPMVCGWDECDRMARTPYQVRIHEHVGRCNSEIAQYGRHAHHVFCCEDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRFR*
AP72_2010_repI_A100DRAFT_10322511	3300000837	Forest Soil	DTMMPMVCGWDECDRRARTPYQVRVHEHPGRCNSPAARYGRHSHYVFCSERHLLYWVYSSGANAHEAAARNRGRIYGQLPEGLRNRI*
AP72_2010_repI_A100DRAFT_10357362	3300000837	Forest Soil	MINLDTQMPMVCGWDECDRMARTPYQVRIHEHVGRCNSELAQYGRHAHHVFCCEDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRYR*
AP72_2010_repI_A001DRAFT_10633422	3300000893	Forest Soil	PSAPRRVERLMINLDTQMPMVCGWDECDRMARTPYQVRIHEHVGRCNSELAQYGRHAHHVFCCEDHLLFWVSCSGDNAKEMAARHQGRIRGYLPEGQRLGRFR*
Ga0062387_1014681052	3300004091	Bog Forest Soil	MAIGMQGSAPVRVERLMINLDTMMPMVCGWDECDKHARTPYQVRLHEHAGRCESEQAQYGRHAHYVFCTERHLLYWVHSSGWRAQELAAAHGGRVYGMLPPGLRNRI*
Ga0062389_1037552532	3300004092	Bog Forest Soil	MAIGMQGSAPVRVERLMINLDTMMPMVCGWDTCDKHARTPYQVRLHEHAGRCESEQAQYGRHAHYVFCTERHLLYWVHSSGWRAQELAAAHGGRVYGMLPPGLRNRI*
Ga0008092_113428721	3300004629	Tropical Rainforest Soil	VAIGMQRSAPARIERLMINLDTQMAMMCAWDDCDRRARTPYQVRLHEHVGRCNSEQAQYGRHAHYVFCSEYCLLYWVWSSGANAHELAARHGGKIYGMLPPGAPRRIR*
Ga0070735_105313762	3300005534	Surface Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDTCDRLARTPYQVRTHEHVGRCNSEIALMGRHSHYVFCSENHLLYWVMQSGDNAREMAARHNGRIGGYLPEGRRLGRYR*
Ga0066903_1062065642	3300005764	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMMCAWDTCDRYARTPYQVRVHEHEGRCNSPEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0126380_101200793	3300010043	Tropical Forest Soil	MINLDTQAPMVCGWDECDRPARTPYQVRVHEHEGRCTSWAAQFGRHAHYVFCSERHLLYWVNASGDNAKEAAARNNGRVYGMMPHGLRNRI*
Ga0126373_1000204328	3300010048	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCAWDTCDRYARTPYQVRVHEHEGRCNSLEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0126373_100206692	3300010048	Tropical Forest Soil	MQPSAPRRVERLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCSSEAAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHQGRVRGYLPEGNRLGRFR*
Ga0126373_101340405	3300010048	Tropical Forest Soil	MPIGMQRSAPARVERLMINLDTMMPMQCGYKDCERMARTPYQVRVHEHVGRCSSEIAQYGRHAHYVFCSEYCLDYWTNESGWRAHDTAARHNGRIGGMRSPGAPQRYR*
Ga0126373_101432382	3300010048	Tropical Forest Soil	VPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRLARTPYQVRVHEHVGRCSSEAAQYGRHTHYVFCCEDHLLYWVMCSGENAHEMAARHGGRVRGYLPEGFRLGRFR*
Ga0126373_101592802	3300010048	Tropical Forest Soil	MPIGMQHSAPARVERLMINLDTMMPMVCGWDECDRRARTPYQVRLHEHTGRCSSEQAQYGRHAHYVFCSERHLLYWVSQSGANAHETAARNRGQIYGMLPAGLRNRI*
Ga0126373_101837512	3300010048	Tropical Forest Soil	MINLDTQAPMVCGWDECDRMARTPYQVRVHEHVGRCNSEAAQYGRHTHYVFCCEDHLLYWVMCSGNNAHEMAARHQGRVRGYLPEGFRLGRFR*
Ga0126373_102096563	3300010048	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQQPMVCAWDECDRKARSPFQVLVHEHVDRCNSAAAQYGRHAHYVFCCDDHLQFWVTCSGENAHEMAARHGGRIRGYLPEGQRLGRYR*
Ga0126373_103901602	3300010048	Tropical Forest Soil	MPIGMQPSAPARVERLMINLDTQSPMVCGWDECDRLARTPYQVRVHEHQGRCNSEEAQYGRHAHYVFCTERHLLYWVNASGSNAREAAARNRGGQIYGMMPHGLRNRI*
Ga0126373_117672061	3300010048	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRLARTPYQVRVHEHVGRCNSLEAQFGRHSHYIFCCEDHLQFWVMCSGDNAHEMAARHQGRVRGYLPEGFRLGRFR*
Ga0126373_124892782	3300010048	Tropical Forest Soil	MQPSAPRRVERLMINLDTQMPMVCGWDDCDRLARTPFQVRVHEHLGKCSSEIAQVGRHSHYVFCCEDHREFWVNCSGANAHEMEARHNGRIRGYLSEGNRLGRFR*
Ga0074044_106552622	3300010343	Bog Forest Soil	MINLDTQLPMVCGGDECDKLARTPYQVRVHEHVGRCNSEIGQQGRHAHYVFCCERHLMYWVHSSGERAHDLAAHYNGHMRGYLPPGMRFRT*
Ga0126378_100269608	3300010361	Tropical Forest Soil	MINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCSSEAAQYGRHAHYIFCCEDHLLFWVMCSGENAHEMAARHQGRVRGYLPEGNRLGRFR*
Ga0126378_102415961	3300010361	Tropical Forest Soil	MINLDTQAPMVCAWDTCDRYARTPYQVRVHEHEGRCNSLEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0126378_105989674	3300010361	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCSSEAAQFGRHAHYVFCCEDHLLFWVMCTGENAHEMAARHHGQVRGYLPTGFRLGRFR*
Ga0126378_108643861	3300010361	Tropical Forest Soil	MINLDTQAPMLCAWDECDRLARTPYQVRVHEHEGRCNSAEAQYGRHAHYVFCSERHLLYWVNASGTNALEAAARNRGGRVYGMMPHGLRNRI*
Ga0126378_109010682	3300010361	Tropical Forest Soil	LMINLDTQAPMVCGWDECDRLARTPYQVRVHEHVGRCNSEAAQYGRHTHYVFCCEDHLLYWVMCSGDNAHEMAARHQGRVRGYLPEGFRLGRFR*
Ga0126378_112839181	3300010361	Tropical Forest Soil	MINLDTQMPMVCAWDECDRKARTPYQVRVHEHTGRCTSEQAQYGRHAHYVFCSERHLLYWVSCSGENAREMEARHGGRIRGYLPPGLRNRI*
Ga0126377_123511773	3300010362	Tropical Forest Soil	CAWDECDRLARTPYQVRVHEHEGRCNSAEAQYGRHAHYVFCSERHLLYWVNASGTNALEAAARNRGGRVYGMMPHGLRNRI*
Ga0126379_129654271	3300010366	Tropical Forest Soil	RYARTPYQVRVHEHEGRCNSLEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0134125_120727022	3300010371	Terrestrial Soil	SAPRRVERLMINLDTMLPMTCNWDECDRLARSPFQVRVHEHVGRCNSEQAQYGRHAHYVFCCDDHLLYWVSCSGENAHEMAARHNGRIRGYLPEGQRLGRYR*
Ga0126381_1000192135	3300010376	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMLCAWDECDRLARTPYQVRVHEHEGRCNSAEAQYGRHAHYVFCTERHLLYWVNASGTNALEAAARNRGGRVYGMMPHGLRNRI*
Ga0126381_1002559462	3300010376	Tropical Forest Soil	MPIGMQHSAPQRVERLMINLDTMMPMVCGWDECDRKARTPYQVRVHEHTGRCTSEQAQYGRHAHYVFCSERHLLYWVSCSGENAREMEARHGGRIRGYLPPGLRNRI*
Ga0126381_1010030002	3300010376	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCAWDTCDRYARTPYQVRVHEHEGRCNSPEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0126381_1024174961	3300010376	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQQPMVCAWDECDRKARTPFQVRVHEHVGRCNSEAAQYGRHSHYVFCCDDHLQFWVACSGENAHEMAARHGGRIRGYLPEGQRLGRYR*
Ga0134126_101401156	3300010396	Terrestrial Soil	MPIGMQPSAPRRVERLMINLDTQMPMICGWDECDAKARTPYQVRVHEHVGRCSSEAAQYGRHAHYVFCCERHLMYWVHSSGERAHDLAAHYNGRMRGFLPPGMRFRT*
Ga0126369_100504295	3300012971	Tropical Forest Soil	MINLDTQAAMVCGWDECDRLARTPYQVRVHEHVGRCSSEAAQYGRHTHYVFCCEDHLLYWVMCSGDNAHEMAARHGGRVRGYLPEGFRLGRFR*
Ga0126369_111661692	3300012971	Tropical Forest Soil	NLDTQAPMVCAWDTCDRYARTPYQVRVHEHEGRCNSLEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI*
Ga0182041_101192993	3300016294	Soil	MINLDTQAPMVFGWDECDRMARTPYQVRIHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHETAARHHGQVRGYLPEGNRLGRFR
Ga0182033_100775902	3300016319	Soil	MINLDTQAPMVCGWDECDRMARTPYQVRIHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHRGRVRGYLPEGNRLGRFR
Ga0182034_100720882	3300016371	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYSGRIRGFLPPGERFRT
Ga0182040_118931941	3300016387	Soil	MINLDTQAPMVCSWDECDRPGRTPYQVRVHEHAGRCNSFEAQYGRHAHYVFCCERHLLYWVYASGDRAKEAAARNQGRIYGQLPEGTRNMLWRR
Ga0182039_101588391	3300016422	Soil	APRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0182038_100289471	3300016445	Soil	RLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHRGRVRGYLPEGNRLGRFR
Ga0187775_105282852	3300017939	Tropical Peatland	MPIGMQPSAPRRVERLMINLDTTLPMTCAWAECDKRARTPFQVRLHEHAGTCSSEVAQYGRHAHYVFCCERHLLYWAHSTGWRARELAARYGGR
Ga0187776_100082479	3300017966	Tropical Peatland	MPIGMQPSAPRRVERLMINLDTTLPMTCAWAECDKRARTPFQVRLHEHAGTCSSEVAQYGRHAHYVFCCERHLLYWAHSTGWRARELAARYGGRSWGFLPPGSRIR
Ga0210407_108537502	3300020579	Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDTCDKLARTPYQVRTHEHQGRCNSERAQYGRHSHYVFCSERHLMYWVSQSGENAHEMAARYNGRIGGFLPPGMRFRT
Ga0210400_107170382	3300021170	Soil	MPIGMQPSAPRRVERLMINLDTMLPMVCGWDECDAKARTPYQVRVHEHVGSCGSEQAQYGRHAHYVFCCERHLMYWVHSSGERAHDLAAHHNGRIRGFLPPGMRFRT
Ga0210396_100616708	3300021180	Soil	MPIGMQPSAPRRVERLMINLDTMLPMVCGWDECDAKARTPYQVRVHEHVGSCGSEQAQYGRHAHYVFCCERHLMYWVHSSGERAHDLAAHYNGRIRGFLPPGMRFRT
Ga0210397_104626153	3300021403	Soil	MPIGMQPSAPARVERLMINLDTQLPMVCGWDECDRPARTPYQVRVHEHQGRCNSEEAQYGRHAHYVFCCERHQMYWVHSSGERAHDLAAHYNGRMRGFLPPGMRFRT
Ga0210383_101142714	3300021407	Soil	MPIGMQPSAPARVERLMINLDTQMPMVCAWDECDRLARTPYQVRTHEHVGRCNSEQAQYGRHAHYVFCCQRHLDYWAHSSGERAHDLAAHYNGRIRGFLPPGMRFRT
Ga0210383_102933032	3300021407	Soil	MPIGMQPSAPRRVERLMINLDTQMPMICGWDECDAKARTPYQVRVHEHVGRCSSEAAQYGRHAHYVFCCERHLMYWVHSSGERAHDLAAHYNGRMRGFLPPGMRFRT
Ga0210402_106427513	3300021478	Soil	MPIGMQPSAPRRVERLMINLDTQLPMVCGWDECDRPARTPYQVRVHEHQGRCNSEEAQYGRHAHYVFCCERHQMYWVHSSGERAHDLASHYNGRMRGFLPPGMRFRT
Ga0210402_117312612	3300021478	Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDTCDKLARTPYQVRTHEHQGRCNSERAQYGRHSHYVFCSERHLMYWVSQSGDNAHEMAARYNGRIGGFLPPGMR
Ga0210409_101781675	3300021559	Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCGWDTCDRLARTPYQVRTHEHVGSCGSEAAQYGRHAHYVFCCERHLMYWVHSSGERAHDLAAHYNGRMRGFLPPGMRFRT
Ga0126371_1001897711	3300021560	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRLARTPYQVRVHEHVGRCNSLEAQFGRHSHYIFCCEDHLQFWVMCSGDNAHETAARHHGQVRGYLPEGFRLGRFR
Ga0126371_101072164	3300021560	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMMCAWDTCDRYARTPYQVRVHEHEGRCNSPEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI
Ga0126371_101656705	3300021560	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHIGRCSSEAAQFGRHAHYVFCCEDHLLFWVMCTGENAHEMAARHQGQVRGYLPTGFRLGRFR
Ga0126371_102543236	3300021560	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTQAPMVCAWDTCDRYARTPYQVRVHEHEGRCNSLEAQYGRHAHYVFCCEGHLLYWVNASGTNALRAATENRGGRIYGNKPAGLRNRI
Ga0126371_103076565	3300021560	Tropical Forest Soil	MPIGMQPSAPARVERLMINLDTQSPMVCGWDECDRLARTPYQVRVHEHQGRCNSEEAQYGRHAHYVFCCERHLLYWVNASGSNAREAAARNRDGRIYGMMPHGLRNRI
Ga0126371_103283631	3300021560	Tropical Forest Soil	WRFTGGDTDMPIGMQASAPRRVERLMINLDTGLPMICAWDECDRKARTPFQVRVHEHVGRCNSEAAQYGRHSHYVFCCDDHLQFWVACSGENAHEMAARHGGRIRGYLPEGQRLGRYR
Ga0126371_104408912	3300021560	Tropical Forest Soil	NARRDQGKGAAAMRIGMQPSAPRRVERLMINLDTQQPMVCAWDECDRKARSPFQVLVHEHVDRCNSAAAQYGRHAHYVFCCDDHLQFWVTCSGENAHEMAARHGGRIRGYLPEGQRLGRY
Ga0126371_114270013	3300021560	Tropical Forest Soil	MAIGMQASAPARVERLMINLDTMHPMVCGWDECDKHARTPYQVRIHEHEGRCNSEAAQYGRHSHYVFCSERHLLYWVNSSGPHAHEAAARNQGRIYGQLPEGFRNRI
Ga0126371_138414532	3300021560	Tropical Forest Soil	MPIGMQPSAPRRVERLMINLDTGLAMICAWDECDRKARTPFQVRVHEHVDRCNSEAAQYGRHSHYVFCCDDHLQFWVTCSGENAHEMAARHGGRIRGYLPEGQRLGRYR
Ga0247670_10624242	3300024283	Soil	MPIGMQPSAPRRIERLMINLDTQMPMICGWDECDAKARTPYQVRVHEHVGRCSSEAAQYGRHSHYVFCCERHLMYWVHSSGERAHDLAAHYNGRIRGFLPPGMRFRT
Ga0257161_100049414	3300026508	Soil	MAIGMQQSAPARVERLMINLDTMMPMMCAWDDCFKNARTPYQVRLHEHAGRCNSAEAQYGRHAHFVFCSERHQLYWLASSGNNAHRTAAEHGGQIYGMLPAGLRNRI
Ga0209465_103098712	3300027874	Tropical Forest Soil	VPIGMQPSAPRRVERLMINLDTQAAMVCGWDECDRLARTPYQVRVHEHVGRCNSEAAQYGRHTHYVFCCEDHLLYWVMCSGDNAHEMAARHGGRVRGY
Ga0209168_105497021	3300027986	Surface Soil	YLGAADERTSVMPIGMQPSAPRRVERLMINLDTQMPMVCGWDTCDRLARTPYQVRTHEHVGRCNSEIALMGRHSHYVFCSENHLLYWVMQSGDNAREMAARHNGRIGGYLPEGRRLGRYR
Ga0318516_100051004	3300031543	Soil	MINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHRGRVRGYLPEGNRLGRFR
Ga0318516_102340682	3300031543	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0318516_105793312	3300031543	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELA
Ga0318534_101281032	3300031544	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318515_104114642	3300031572	Soil	MPIGMQGSAPARVERLMINLDTTRPMVCGWDECDRRARTPYQVRVHEHQGRCNSEAAQYGRHAHYVFCSERHLLYWVNSSGPNAHETAARNQGRIYGQLPEGFRNRL
Ga0310915_102555802	3300031573	Soil	MINLDTQAPMVCGWDECDRMARTPYQVRIHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHETAARHHGQVRGYLPEGNRLGRFR
Ga0306917_107660322	3300031719	Soil	VLMAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318500_107296852	3300031724	Soil	NLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0318501_104369802	3300031736	Soil	MINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318494_105783412	3300031751	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLP
Ga0318546_100663282	3300031771	Soil	MINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHETAARHHGQVRGYLPEGNRLGRFR
Ga0318543_100542033	3300031777	Soil	VPIGMQPSAPRRVERLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHRGRVRGYLPEGNRLGRFR
Ga0318498_103467471	3300031778	Soil	MQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318529_100304642	3300031792	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318576_102941751	3300031796	Soil	MPIGMQQSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHY
Ga0318517_102083002	3300031835	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0318527_101765071	3300031859	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNNEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0306919_100587741	3300031879	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318544_103072212	3300031880	Soil	PMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0306925_107177452	3300031890	Soil	MPIGMQQSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0306921_124980981	3300031912	Soil	LPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0306926_1004814110	3300031954	Soil	APARVERLMINLDTTRPMVCGWDECDRRARTPYQVRVHEHQGRCNSEAAQYGRHAHYVFCSERHLLYWVNSSGPNAHETAARNQGRIYGQLPEGFRNRL
Ga0318531_100499734	3300031981	Soil	MPIGMQQSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0318531_103687682	3300031981	Soil	DTMLPMTCGWDECDRRARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYGGRIRGFLPPGERFRT
Ga0318531_103891801	3300031981	Soil	GMQPSAPRRVERLMINLDTQAPMVCGWDECDRMARTPYQVRVHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHEMAARHRGRVRGYLPEGNRLGRFR
Ga0318562_104914161	3300032008	Soil	QPSAPRRTERLMINLDTQMPMICGWDDCDRLARTPFQVRVHEHLGKCTSQVAQLGRHSHYVFCCEDHLLYWVSCSGENAREMEARHGGRIRGYLPEGQRLGRYR
Ga0318562_107934081	3300032008	Soil	MPVGMQPSAPRRVERLMINLDTQAPMVCSWDECDRPGRTPYQVRVHEHAGRCNSFEAQYGRHAHYVFCCERHLLYWVYASGDRAKEAAARNQGRIYGQLPEGTRNMLWRR
Ga0310911_100132078	3300032035	Soil	MINLDTQAPMVCGWDECDRMARTPYQVRIHEHTGRCNSLEAQYGRHAHYVFCCEDHLLYWVMCSGDNAHETAARHHGQVRGYL
Ga0318518_106240112	3300032090	Soil	PSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHVGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRGFLPPGERFRT
Ga0318577_105488051	3300032091	Soil	MAIGMQPSAAPRVERLMINLDTMLPMTCGWDECDRKARTPYQVRVHEHTGRCNSEAAQYGRHAHYVFCCDRHLAYWVHSSGWRAHELAAHYDGRIRG
Ga0335078_116141463	3300032805	Soil	MPIGMQPSAPRRVERLMINLDTQMPMVCAWDTCDRLARTPYQVRTHEHVGRCNSQIAQMGRHSHYVFCCEDHLLYWVMQSGENAREMAARHNGRIGGYLPEGRRLGR
Ga0335070_102319321	3300032829	Soil	VERLMINLDTMHPMMCGWDECDRHARTPYQVRVHEHVGRCNSEQAQYGRHSHYVFCSERHLLYWVTASGANAHHTAARNQGRIYGQLPEGLRNRI
Ga0335069_103568922	3300032893	Soil	MPIGMQASAPARVERLMINLDTMHPMMCGWDECDRHARTPYQVRVHEHVGRCNSEQAQYGRHSHYVFCSERHLLYWVTASGANAHHTAARNQGRIYGQLPEGLRNRI
Ga0335074_101161131	3300032895	Soil	MPIGMQPSAPARVERLMINLDTQMPMICGWDECDKLARTPYQVRVHEHVGRCESEAAQYGRHAHYVFCCQRHLDYWVWSSGWRAHELEARYNGRIRGYLPPGSR
Ga0335074_102472874	3300032895	Soil	MPIGMQPSAPARVERLMINLDTMMPMVCGWDECDKLARTPYQVRVHEHVGRCESEIAQLGRHAHYVFCCERHLMYWVHSSGWRAHELASHYNGRMRGFLPPGMRFRT
Ga0335074_103074143	3300032895	Soil	MPIGMHAPAPRRVERLMINLDTQLPMTCGWDECDRLARSPFQVRVHEHLGRCESEVAQYGRHAHYVFCCERHLLYWVHSSGWRAHELASHYNGRIRGFLPPGQRFRS
Ga0335072_100289158	3300032898	Soil	MPIGMQPSAPARVERLMINLDTQMPMICGWDECDKLARTPYQVRVHEHVGRCESEAAQYGRHAHYVFCCERHLLYWVHSSGWRAHELAAHYNGHMRGYLPPGMRFRT
Ga0335072_101891113	3300032898	Soil	MPIGMQPSAPARVERLMINLDTQVPMVCGWDECDKLARTPYQVRVHEHVGRCESEAAQFGRHAHYVFCCERHLMYWVHSSGWRAHELASHYNGRMRGFLPPGMRFRT
Ga0335072_104867272	3300032898	Soil	MPIGMQPSAPARVERLMINLDTQMPMVCGWDTCDRLARTPYQVRVHEHAGRCNSAIAQMGRHAHYVFCCEDHLLFWVMQSGKNAHEMAARHNGRIGGYLPEGRRLGRYR
Ga0335072_105382621	3300032898	Soil	VPIGMQPSAPARVERLMINLDTQMPMICGWDECDKLARTPYQVRVHEHAGRCESEAAQYGRHAHYVFCCERHLLYWVHSSGWRAHELASHYNGHMRGYLPPGMRFRT
Ga0335072_109656923	3300032898	Soil	MPIGMQPSAPARVERLMINLDTQMPMVCGWDECDKLARTPYQVRVHEHVGRCESEAAQFGRHAHYVFCCQRHLDYWVWSSGWRAHELASHYNGRMRGFLPPGMRFRT
Ga0335076_112660652	3300032955	Soil	MPIGMQPSAPARVERLMINLDTQMPMVCGWDECDKLARTPYQVRVHEHVGRCSSDIAQLGRHAHYVFCCERHLMYWVHSSGWRAHELASHYNGRMRGFLPPGMRFRT
Ga0335073_111123713	3300033134	Soil	MPIGMQPSAPARVERLMINLDTQMPMVCGWDECDKLARTPYQVRVHEHVGRCESEAAQFGRHAHYVFCCERHLLYWVHSSGWRAHELAAHYNGHMRGYLPPGQRFRT
Ga0335073_114970281	3300033134	Soil	SAPARVERLMINLDTQMPMVCGWDECDKLARTPYQVRVHEHVGRCSSDIAQLGRHAHYVFCCERHLMYWVHSSGWRAHELASHYNGRMRGFLPPGMRFRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences