Metagenome / Metatranscriptome Family F076966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076966
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	69 residues
Representative Sequence	MKRFIPVGEVVSFVMNTGQESTGTVIQRIAERRQPVILLIEQANGWRCFRFEDEVNSSVPASLAAAI
Number of Associated Samples	57
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.76 %
% of genes near scaffold ends (potentially truncated)	23.93 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.137 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (39.316 % of family members)
Environment Ontology (ENVO)	Unclassified (49.573 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.16% β-sheet: 30.53% Coil/Unstructured: 66.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00719	Pyrophosphatase	24.79
PF13275	S4_2	6.84
PF04321	RmlD_sub_bind	5.98
PF02452	PemK_toxin	2.56
PF04468	PSP1	2.56
PF16640	Big_3_5	1.71
PF16949	ABC_tran_2	1.71
PF00793	DAHP_synth_1	1.71
PF12706	Lactamase_B_2	1.71
PF00106	adh_short	0.85
PF01381	HTH_3	0.85
PF12951	PATR	0.85
PF06414	Zeta_toxin	0.85
PF03683	UPF0175	0.85
PF02599	CsrA	0.85
PF14871	GHL6	0.85
PF00082	Peptidase_S8	0.85
PF09363	XFP_C	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	24.79
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	11.97
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	11.97
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	11.97
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	5.98
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	5.98
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	5.98
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	5.98
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	5.98
COG1774	Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development)	Signal transduction mechanisms [T]	2.56
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	2.56
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	0.85
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.85

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.14 %
Unclassified	root	N/A	47.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.14 %
Unclassified	root	N/A	47.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.14 %
Unclassified	root	N/A	47.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	45.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	43.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	43.59 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	16.24 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	11.11 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	7.69 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	16.24 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	11.11 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
unclassified Gemmataceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae	14.53 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	5.98 %
Tautonia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia	1.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.71 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.85 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Gemmataceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	14.53 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	5.13 %
Tautonia marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	1.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples	0.85 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.86 %
Gemmataceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	14.53 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	5.13 %
Tautonia marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	1.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.71 %
uncultured Clostridium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → uncultured Clostridium sp.	0.85 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101155820	Not Available	960	Open in IMG/M
3300004092\|Ga0062389_101481462	Not Available	862	Open in IMG/M
3300005332\|Ga0066388_101247904	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	1276	Open in IMG/M
3300005332\|Ga0066388_102524104	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	934	Open in IMG/M
3300005332\|Ga0066388_102594582	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	923	Open in IMG/M
3300005332\|Ga0066388_104369990	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	720	Open in IMG/M
3300005332\|Ga0066388_104749868	Not Available	691	Open in IMG/M
3300005332\|Ga0066388_105810132	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	624	Open in IMG/M
3300005332\|Ga0066388_106168896	Not Available	605	Open in IMG/M
3300005332\|Ga0066388_106843821	Not Available	574	Open in IMG/M
3300005524\|Ga0070737_10412303	Not Available	520	Open in IMG/M
3300005531\|Ga0070738_10008772	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	9613	Open in IMG/M
3300005531\|Ga0070738_10122297	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1331	Open in IMG/M
3300005607\|Ga0070740_10100509	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1315	Open in IMG/M
3300005764\|Ga0066903_102415397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → uncultured Clostridium sp.	1017	Open in IMG/M
3300005764\|Ga0066903_104174645	Not Available	773	Open in IMG/M
3300005764\|Ga0066903_107493127	Not Available	563	Open in IMG/M
3300006102\|Ga0075015_100997098	Not Available	512	Open in IMG/M
3300006860\|Ga0063829_1457113	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	627	Open in IMG/M
3300009137\|Ga0066709_102411923	Not Available	714	Open in IMG/M
3300009521\|Ga0116222_1266330	Not Available	739	Open in IMG/M
3300009522\|Ga0116218_1100300	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300009523\|Ga0116221_1097730	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1300	Open in IMG/M
3300009524\|Ga0116225_1259096	Not Available	780	Open in IMG/M
3300009524\|Ga0116225_1558351	Not Available	507	Open in IMG/M
3300009525\|Ga0116220_10432606	Not Available	591	Open in IMG/M
3300009525\|Ga0116220_10564395	Not Available	521	Open in IMG/M
3300009672\|Ga0116215_1109346	Not Available	1237	Open in IMG/M
3300009698\|Ga0116216_10013701	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	5105	Open in IMG/M
3300009698\|Ga0116216_10079283	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	2021	Open in IMG/M
3300009698\|Ga0116216_10378819	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	859	Open in IMG/M
3300009698\|Ga0116216_10748477	Not Available	586	Open in IMG/M
3300009700\|Ga0116217_10372812	Not Available	909	Open in IMG/M
3300009824\|Ga0116219_10548735	Not Available	637	Open in IMG/M
3300010379\|Ga0136449_100010403	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	25731	Open in IMG/M
3300010379\|Ga0136449_100022170	All Organisms → cellular organisms → Bacteria	16072	Open in IMG/M
3300010379\|Ga0136449_100085089	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	6633	Open in IMG/M
3300010379\|Ga0136449_100137012	All Organisms → cellular organisms → Bacteria → PVC group	4853	Open in IMG/M
3300010379\|Ga0136449_100180611	All Organisms → cellular organisms → Bacteria	4061	Open in IMG/M
3300010379\|Ga0136449_100315505	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2837	Open in IMG/M
3300010379\|Ga0136449_100873529	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1471	Open in IMG/M
3300010379\|Ga0136449_101294577	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	1137	Open in IMG/M
3300010379\|Ga0136449_101830924	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	906	Open in IMG/M
3300010379\|Ga0136449_102543660	Not Available	732	Open in IMG/M
3300010379\|Ga0136449_103273693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300011054\|Ga0138523_1027223	Not Available	510	Open in IMG/M
3300011084\|Ga0138562_1207193	Not Available	587	Open in IMG/M
3300011120\|Ga0150983_15470891	Not Available	673	Open in IMG/M
3300012212\|Ga0150985_117787137	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_121589606	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	732	Open in IMG/M
3300012469\|Ga0150984_108366980	Not Available	591	Open in IMG/M
3300012469\|Ga0150984_109090814	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	636	Open in IMG/M
3300012930\|Ga0137407_12066403	Not Available	544	Open in IMG/M
3300013307\|Ga0157372_11759572	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	713	Open in IMG/M
3300014159\|Ga0181530_10596551	Not Available	541	Open in IMG/M
3300014499\|Ga0182012_10143723	Not Available	1730	Open in IMG/M
3300014501\|Ga0182024_10028308	All Organisms → cellular organisms → Bacteria	9754	Open in IMG/M
3300014501\|Ga0182024_10205339	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300015357\|Ga0134072_10370772	Not Available	555	Open in IMG/M
3300017970\|Ga0187783_10453003	Not Available	931	Open in IMG/M
3300019268\|Ga0181514_1018441	Not Available	623	Open in IMG/M
3300021180\|Ga0210396_11514735	Not Available	551	Open in IMG/M
3300021405\|Ga0210387_11406610	Not Available	600	Open in IMG/M
3300021560\|Ga0126371_13147301	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	558	Open in IMG/M
3300027662\|Ga0208565_1030473	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1842	Open in IMG/M
3300027854\|Ga0209517_10307410	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300027965\|Ga0209062_1044412	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2205	Open in IMG/M
3300027965\|Ga0209062_1106430	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1164	Open in IMG/M
3300027968\|Ga0209061_1251495	Not Available	521	Open in IMG/M
3300030494\|Ga0310037_10266986	Not Available	738	Open in IMG/M
3300030706\|Ga0310039_10153883	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	928	Open in IMG/M
3300030738\|Ga0265462_11228485	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	672	Open in IMG/M
3300030741\|Ga0265459_11871340	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	711	Open in IMG/M
3300030741\|Ga0265459_14246425	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	503	Open in IMG/M
3300031057\|Ga0170834_106004579	Not Available	552	Open in IMG/M
3300031057\|Ga0170834_108864918	Not Available	724	Open in IMG/M
3300031057\|Ga0170834_110299776	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	575	Open in IMG/M
3300031128\|Ga0170823_15878891	Not Available	544	Open in IMG/M
3300031231\|Ga0170824_102725218	Not Available	519	Open in IMG/M
3300031231\|Ga0170824_115743136	Not Available	757	Open in IMG/M
3300031231\|Ga0170824_118852973	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	595	Open in IMG/M
3300031231\|Ga0170824_122653477	Not Available	878	Open in IMG/M
3300031231\|Ga0170824_123071637	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	633	Open in IMG/M
3300031446\|Ga0170820_10722779	Not Available	637	Open in IMG/M
3300031446\|Ga0170820_12522436	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	514	Open in IMG/M
3300031474\|Ga0170818_101252063	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	514	Open in IMG/M
3300031708\|Ga0310686_106153367	Not Available	1306	Open in IMG/M
3300031708\|Ga0310686_107071642	Not Available	569	Open in IMG/M
3300031708\|Ga0310686_115128702	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3707	Open in IMG/M
3300031708\|Ga0310686_116383073	Not Available	639	Open in IMG/M
3300031719\|Ga0306917_10659346	Not Available	823	Open in IMG/M
3300031829\|Ga0316050_107870	Not Available	552	Open in IMG/M
3300031946\|Ga0310910_11370248	Not Available	545	Open in IMG/M
3300032160\|Ga0311301_10007462	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	36660	Open in IMG/M
3300032160\|Ga0311301_10014432	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	23903	Open in IMG/M
3300032160\|Ga0311301_10020475	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	18691	Open in IMG/M
3300032160\|Ga0311301_10035221	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	12543	Open in IMG/M
3300032160\|Ga0311301_10046589	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	10132	Open in IMG/M
3300032160\|Ga0311301_10054919	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	8938	Open in IMG/M
3300032160\|Ga0311301_10085836	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	6375	Open in IMG/M
3300032160\|Ga0311301_10256660	All Organisms → cellular organisms → Bacteria → PVC group	2872	Open in IMG/M
3300032160\|Ga0311301_10539785	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Tautonia → Tautonia marina	1710	Open in IMG/M
3300032160\|Ga0311301_10855109	Not Available	1236	Open in IMG/M
3300032160\|Ga0311301_10921016	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1173	Open in IMG/M
3300032160\|Ga0311301_11558878	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	808	Open in IMG/M
3300032160\|Ga0311301_12250685	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	623	Open in IMG/M
3300032160\|Ga0311301_12251190	Not Available	623	Open in IMG/M
3300032515\|Ga0348332_10767207	Not Available	531	Open in IMG/M
3300032515\|Ga0348332_11569744	Not Available	1053	Open in IMG/M
3300032515\|Ga0348332_12558947	Not Available	604	Open in IMG/M
3300032515\|Ga0348332_12969574	Not Available	1114	Open in IMG/M
3300032515\|Ga0348332_13391329	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	720	Open in IMG/M
3300032515\|Ga0348332_13674746	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	646	Open in IMG/M
3300032515\|Ga0348332_13681434	Not Available	588	Open in IMG/M
3300032770\|Ga0335085_12120823	Not Available	567	Open in IMG/M
3300032896\|Ga0335075_10836103	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	856	Open in IMG/M
3300033134\|Ga0335073_10982641	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.45%
Aquatic	Environmental → Aquatic	4.27%
Plants	Host-Associated → Plants	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.47%
Plant Litter	Environmental → Terrestrial → Plant Litter	5.98%
Freshwater	Environmental → Aquatic → Freshwater	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	5.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.26%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	5.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	39.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	10.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.40%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011054	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011084	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031829	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1011558201	3300004092	Bog Forest Soil	MQASISVGETVSFILNTGQTGRGTVIQRIAERRQPVILLIEQANGWRCFRLEEEVTPQLAPAATA
Ga0062389_1014814622	3300004092	Bog Forest Soil	MKPCIPVGEIVSFVTNTGLASTGTVIQRIAERRQPVILLIEQANGWRCFRFEEEVTSLVPAELATAS*
Ga0066388_1012479042	3300005332	Tropical Forest Soil	MKRSIPVGETVGFSLNTGQEARGKVVQRISERRQPVILLIEQANGLRCFRFEDDVTPVEAPAMAVGL*
Ga0066388_1025241041	3300005332	Tropical Forest Soil	MKRFISVGEVVSFEMNTGLTGRGMVIERIAERKQPVILLIEQADGWRCFRLEDEVSVAGSTPLETANR*
Ga0066388_1025945822	3300005332	Tropical Forest Soil	MKRSIPVGETVSFTRNTGQVSQGKVIQRIAERRQPVILLIEQANGWRCFRLEEEVTPMLPAALATNH*
Ga0066388_1043699902	3300005332	Tropical Forest Soil	MKRTISVGELVSFSLNTGQAARGKVVQRISERRQPVILLIEQANGLRCFRLEDDVTVVEAAAMAMSR*
Ga0066388_1047498682	3300005332	Tropical Forest Soil	MKRTIEVGETVSFTMNTGRAGCGAVIQRIAERRQPVILLIEQANGWRCFRLEDEVTIVESESMIAASA*
Ga0066388_1058101321	3300005332	Tropical Forest Soil	MKRSIPVGEIVSFTLNTGQAGRGKVLQRIAERRQPVILLIEQANGWRCFRFEEDVVPLASAALATSP*
Ga0066388_1061688961	3300005332	Tropical Forest Soil	MKRSIPVGELVSFSLNTGQEARGRVLQRISERRQPVILLIEQPNGLRSFRFEEDVTPVEAAEMAASH*
Ga0066388_1068438211	3300005332	Tropical Forest Soil	MKRPIAVGETVSFSMNTGQTGRGKVIQRIAERRQPVILLIEQANGWRCFRLEDDVAAQGTAALAVSR*
Ga0070737_104123031	3300005524	Surface Soil	MKRSIPVGEVVAFSLNTGQQGRGKVVQRISERRQPVILLIEQANGLRCFRFEEEVSVVESAAMAMSH*
Ga0070738_100087727	3300005531	Surface Soil	MKRSIPVGETVAFTMNTGQESQGKVIQRIAERRQPVILLIEQANGWRCFRLEDEVTPLRAAALATSR*
Ga0070738_101222973	3300005531	Surface Soil	MKRTIPIGELVSFSLNTGQQGRGRVVQRISERRQPVILLIEQANGLRCFRFEEEVTPVESAAMAVGP*
Ga0070740_101005092	3300005607	Surface Soil	MKRSIPVGEVVAFSLNTGQQGRGKVVQRISERRQPVILLIEQANGLRCFRFEEEVSVVESAALAMSH*
Ga0066903_1024153972	3300005764	Tropical Forest Soil	MKRSIPVGETVSFTRNTGQVSQGKVIQRIAERRQPVILLIEQANGWRCFRLEDEVNPMTSAQLVA
Ga0066903_1041746451	3300005764	Tropical Forest Soil	MNRSVAVGEFVSFVMNTGATGVGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVGEPEAAIAEAVS*
Ga0066903_1074931271	3300005764	Tropical Forest Soil	MKRMIPLGETVLFTMNTGQTGRGKVIQRIVERRQPVILLIEQANGWRCFRLEEEVSPIAPVALATSR*
Ga0075015_1009970981	3300006102	Watersheds	FTDVGKSVTRTPGRGSREGKPMNRSISVGEVVAFVMNTGIASYGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPDAALLSVAT*
Ga0063829_14571132	3300006860	Peatlands Soil	MNRSILVGEIVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSAPSKPEPALATAG*
Ga0066709_1024119232	3300009137	Grasslands Soil	MKRTIPVGETVSFTMNTGQEGHGKVIQRIAERRQPVILLIEQANGWRCFRLEEEVSPVPRAALAANH*
Ga0116222_12663302	3300009521	Peatlands Soil	MIPVGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRCSDSAPVATASR*
Ga0116218_11003002	3300009522	Peatlands Soil	MKRTIEIGEAVLFTMNTGQASQGTVIERIAERRQPVILLIEQANSWRCFRLEDEVKVVEAELLAEASA*
Ga0116221_10977303	3300009523	Peatlands Soil	WKVEPMKRMISVGEVVSFVMNTGQAGYGVVIERIAERKQPVILLIEQANGLRCFRFEDEVGSSVPAALATASQ*
Ga0116225_12590962	3300009524	Peatlands Soil	MKRIISVGEVVSFVRNTGQAGRGVVIERIAERKQPVILLIEQVNGLRCFRFEDEVGSSVPASLATASR*
Ga0116225_15583511	3300009524	Peatlands Soil	MKRTIDVGEVVSFTLNTGQASQGTVIQRIAERRQPVILLIEQANSWRCFRLEDEVKVVEAELLAEASA*
Ga0116220_104326062	3300009525	Peatlands Soil	MKRMIPVGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRCSDSAPVATASR*
Ga0116220_105643952	3300009525	Peatlands Soil	MKRFIPVGEVVSFVMNTGQESTGTVIQRIAERRQPVILLIEQANGWRCFRFEDEVNSSVPASL
Ga0116215_11093462	3300009672	Peatlands Soil	MKRIISVGEVVSFVRNTGQAGRGVVIERIAERKQPVILLIEQANGLRCFRFEDEVGSSVPAALATASQ*
Ga0116216_100137011	3300009698	Peatlands Soil	MKRFIPVGEVVSFVMNTGQESTGTVIQRIAERRQPVILLIEQANGWRCFRFEDEVNSSVPASLAAAI*
Ga0116216_100792832	3300009698	Peatlands Soil	MKRFIPVGEVVSFVMNTGQSGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVGPPAPAPVARASR*
Ga0116216_103788191	3300009698	Peatlands Soil	MKRTIEIGEAVSFTMNTGHASQGTVIQRIAERRQPVILLIEQANGWRCFRLEDEVTLVATESLAEASA*
Ga0116216_107484771	3300009698	Peatlands Soil	MKRMIPVGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRC
Ga0116217_103728121	3300009700	Peatlands Soil	MKRFIPVGEVVSFVTNTGQAGRGVVIERVAERKQPVILLIEQANGWRCFRFEDEVNSPAP
Ga0116219_105487351	3300009824	Peatlands Soil	MKRFIPVGEVVSFVMNTGQAGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVGPPAPAPVARASR*
Ga0136449_10001040315	3300010379	Peatlands Soil	MKRTIEIGEAVSFTMNTGQCSRGRVIQRIAERRQPVILLIEQANGWRCFRLEDEVKVVDSELLAEASA*
Ga0136449_1000221706	3300010379	Peatlands Soil	MKQSIAVGEIVSFVLNTGQPSEGVVVDRIAERKQPVILLIEQANGWRCFRFEDEVNVPASETVESATT*
Ga0136449_1000850894	3300010379	Peatlands Soil	MKRFIPVGEVVSFVMNTGQAGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVTSPVAAAVTAGSR*
Ga0136449_1001370124	3300010379	Peatlands Soil	MKRFIPVGEVVSFVMNTGQAGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVNSPVAGAVATAS*
Ga0136449_1001806112	3300010379	Peatlands Soil	MKRTIEIGEAVSFTMNTGQSSRGTVIQRIAERRQPVILLIEQANGWRCFRLEDEVKLVETASLVAASA*
Ga0136449_1003155053	3300010379	Peatlands Soil	MKRFIPVGEVVSFVTNTGQAGRGVVIERVAERKQPVILLIEQANGWRCFRFEDEVNSPAPVTTASR*
Ga0136449_1008735292	3300010379	Peatlands Soil	MKRFISVGEVVSFVMNTGQASRGVVIERVAERKQPVILLIEQANGWRCFRFEDEVTAAASTALTVASG*
Ga0136449_1012945772	3300010379	Peatlands Soil	MNRSISVGEVVSFVMNTGIASQGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVGEPDAALLMVAT*
Ga0136449_1018309241	3300010379	Peatlands Soil	PDHESPRKVQPMKRTIEIGEAVSFTMNTGQASQGTVIQRIAERRQPVILLIERANGWRCFRLEDEVKLVETESLAEASA*
Ga0136449_1025436602	3300010379	Peatlands Soil	MKRIIPIGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRSLAPAPVTTGSR*
Ga0136449_1032736931	3300010379	Peatlands Soil	MKRTIEIGEAVLFTMNTGQASQGTVIERIAERRQPVILLIEQANGWRCFRLEDEVTLVETESLAEASA*
Ga0138523_10272231	3300011054	Peatlands Soil	MNRSILVGEVVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSAPSKPEPALATAG*
Ga0138562_12071931	3300011084	Peatlands Soil	MNRSILVGETVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSAPSKPEPALATAG*
Ga0150983_154708912	3300011120	Forest Soil	MKQIIEVGEVVSFVMNTGQATTGVVIDRIAERQQPVILLIERANGWRCFRFEDEVTTDVAPALATAS*
Ga0150985_1177871372	3300012212	Avena Fatua Rhizosphere	LNETPWKVGIMRRFIPIGETGSFTMNTGQHSKGKVVQRIAERRQPVVLLIEQANGWRCFRFEDEVSAPSQPELVSASE*
Ga0150985_1215896062	3300012212	Avena Fatua Rhizosphere	MKRTIPVGEIVSFTMNTGQEGQGTVIQRIAERRQPVILLIEQANGWRCFRLEDEVSPVPRAALAASL*
Ga0150984_1083669801	3300012469	Avena Fatua Rhizosphere	MKRTIPVGEIVSFTMNTGQEGQGTVIQRIAERRQPVILLIEQANGWRCFRLEEEVSPVPRAALAASH*
Ga0150984_1090908141	3300012469	Avena Fatua Rhizosphere	MHPEIPVGEIVSFVLNTGQSARGTVIQRIAERRQPVILLIEQANGWRCFRLEEEVTLQQAPMAMASSY*
Ga0137407_120664031	3300012930	Vadose Zone Soil	MKRTIPVGETVSFTTNTGQTGRGEVIQRIAERRQPVILLIEQANRWRCFRLEEEVTPLGAGALAASH*
Ga0157372_117595722	3300013307	Corn Rhizosphere	MKRSIPVGQLVAFSLNTGQQGRGKVVQRISERRQPVILLIEQTNGLRCFRFEEEVTVVEPAAIAVGD*
Ga0181530_105965512	3300014159	Bog	MKRTIDVGEAVSFTLNTGQVSQGTVIQRIAERRQPVILLIEQANGWRCFRLEDEVKLVETESLAEASA*
Ga0182012_101437232	3300014499	Bog	MNRSILVGEVVSFTMNTGVVSTGTVVQRTAERQQPVILLIEQANGWRCFRFEEEVTAEAPAPAESSFATAV*
Ga0182024_100283089	3300014501	Permafrost	MKRSVAIGEVVSFVMNTGAAGLGTVVDRIAERRQPVILLIEQANGWRCFRFEDEVAEPDGALLTAAS*
Ga0182024_102053393	3300014501	Permafrost	MNRSILVGETVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSSPSQPEPALATAV*
Ga0134072_103707722	3300015357	Grasslands Soil	MKRTIPIGETVSFTMNTGQEGQGTVIQRIAERRQPVILLIEQANGWRCFRLEGEVTPMLPAALATSH*
Ga0187783_104530032	3300017970	Tropical Peatland	MKRSIAVGEVVWFTLNTGQAGRGTVIQRIAERRQPVILLLEQANGWRCFRFEEEVEPTEAGSLAMA
Ga0181514_10184412	3300019268	Peatland	ECPNESPWKVEPMNPFIAVGEVVSFVMNTGIASTGVVIERIAERRQPVILLIEQANGWRCFRFEDEVSPLVPSELATAG
Ga0210396_115147351	3300021180	Soil	MTRSIPVGEMVTFTMNTGQEGRGTVIQRIAERRQPVILLIEQANGWRCFRLEEDVTPAAAAAPAMAAGR
Ga0210387_114066102	3300021405	Soil	MTPFISVGDVVSFVMNTGMASTGTVVQRIAERRQPVILLIEQANGWRCFRFEDEVSPMVPLPLATAI
Ga0126371_131473011	3300021560	Tropical Forest Soil	SIPLGESVSFKMNTGQASCGKVIQRIAERRQPVVLLIEQANGWRCFRFEEEVNPLAAAPLELATR
Ga0208565_10304732	3300027662	Peatlands Soil	MKRTIDVGEVVSFTLNTGQASQGTVIQRIAERRQPVILLIEQANSWRCFRLEDEVKVVEAELLAEASA
Ga0209517_103074101	3300027854	Peatlands Soil	MNRSILVGEIVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSAPSKPEPALATAG
Ga0209062_10444122	3300027965	Surface Soil	MKRSIPVGETVAFTMNTGQESQGKVIQRIAERRQPVILLIEQANGWRCFRLEDEVTPLRAAALATSR
Ga0209062_11064302	3300027965	Surface Soil	MKRTIPIGELVSFSLNTGQQGRGRVVQRISERRQPVILLIEQANGLRCFRFEEEVTPVESAAMAVGP
Ga0209061_12514951	3300027968	Surface Soil	MKRSIPVGEVVAFSLNTGQQGRGKVVQRISERRQPVILLIEQANGLRCFRFEEEVSVVESAAMAMSH
Ga0310037_102669862	3300030494	Peatlands Soil	MKRTIEIGEAVSFTMNTGQCSRGRVIQRIAERRQPVILLIEQANGWRCFRFEDEVRCSDSAPVATASR
Ga0310039_101538831	3300030706	Peatlands Soil	TIDVGEVVSFTLNTGQASQGTVIQRIAERRQPVILLIEQANSWRCFRLEDEVKVVEAELLAEASA
Ga0265462_112284852	3300030738	Soil	MQASISVGETVSFILNTGQTGRGTVIQRIAERRQPVILLIEQANGWRCFRLEEEVTPQHAPAAMASSF
Ga0265459_118713402	3300030741	Soil	ECRDESSRKVEAMKRIIEVGELISFVMNTGQTTTGVVIERIAERQQPVILLIERANGWRCFRFEDEVTTDAAPALATAV
Ga0265459_142464252	3300030741	Soil	ARVSGEGKPMNRSISVGEVVSFVMNTGIVSHGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPDGALFAVAI
Ga0170834_1060045791	3300031057	Forest Soil	MNRSISVGEVVSFVMNTGVAGVGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPETALAATAS
Ga0170834_1088649181	3300031057	Forest Soil	MNRSISVGEVVSFVMNTGVAGLGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPESALLTTAT
Ga0170834_1102997761	3300031057	Forest Soil	LESPYESPWKVDPMNSFISVGELVSFVMNTGVASNGTVIERIAERRQPVILLIEQANGWRCFRFEDEVTPLDPSQLAAAG
Ga0170823_158788911	3300031128	Forest Soil	MNRSISVGEVVSFVMNTGVGGIGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPETALAATAS
Ga0170824_1027252181	3300031231	Forest Soil	MKRHIPIGEFVSFVLNTGQTGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVGAPAADPVALESV
Ga0170824_1157431361	3300031231	Forest Soil	MKRFIEVGEVVSFVMNTGQATTGVVIERIAERQQPVILLIERANGWRCFRFEDEVTTGVAPALATAG
Ga0170824_1188529732	3300031231	Forest Soil	MNRSISVGEVVSFVMNTGVVGLGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPESALLTTAT
Ga0170824_1226534771	3300031231	Forest Soil	SGEGKPMNRSISVGEVVSFVMNTGVTGVGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVTEPEEALTATAS
Ga0170824_1230716371	3300031231	Forest Soil	RVSREGKPMNRSIAVGDVVSFVMNTGIASHGRVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEADAAVLAVAI
Ga0170820_107227791	3300031446	Forest Soil	SISVGEVVSFVMNTGVSGVGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVTEPEEALTATAS
Ga0170820_125224362	3300031446	Forest Soil	EGKPMNRSISVGEVVSFVMNTGVAGLGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPESALLTTAT
Ga0170818_1012520632	3300031474	Forest Soil	GEGKPMNRSISVGEVVSFVMNTGVTGVGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVTEPEEALTATAS
Ga0310686_1061533672	3300031708	Soil	MNRSISVGEVVSFVMNTGIASHGTVIDRIAERRQPVILLIEQANGWRCFLFEDEVSEPDGARLALAI
Ga0310686_1070716421	3300031708	Soil	MTRSQARVSREGKPMNRSISVGEVVSFVMNTGVTCLGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVAEPAGAMLATAV
Ga0310686_1151287024	3300031708	Soil	MKRSILVGETVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVTAPSTPEPAFATLG
Ga0310686_1163830732	3300031708	Soil	MTPFISVGEAVSFVMNTGIASTGLVIQRIAERRQPVILLIEQANGWRCFRFEDEVSPLVPSPLATAI
Ga0306917_106593461	3300031719	Soil	MKRSIPVGETVGFSLNTGQEARGKVIQRISERRQPVILLIEQANGLRCFRFEDDVTPVEAPAMAVSL
Ga0316050_1078701	3300031829	Soil	MKRSIDVGETVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVTAPSTPEPAFAT
Ga0310910_113702481	3300031946	Soil	MKRSIPVGESVSFTLNTGQESQGKVIQRIAERRQPVILLIEQANGWRCFRLEEEVSPPNPAALATSR
Ga0311301_1000746217	3300032160	Peatlands Soil	MKRMIPVGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRCSDSAPVATASR
Ga0311301_1001443213	3300032160	Peatlands Soil	MKRFIPVGEVVSFVMNTGQSGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVGPPAPAPVARASR
Ga0311301_100204754	3300032160	Peatlands Soil	MKRIISVGEVVSFVRNTGQAGRGVVIERIAERKQPVILLIEQVNGLRCFRFEDEVGSSVPASLATASR
Ga0311301_100352217	3300032160	Peatlands Soil	MVEPMKQSIAVGEIVSFVLNTGQPSEGVVVDRIAERKQPVILLIEQANGWRCFRFEDEVNVPASETVESATT
Ga0311301_100465893	3300032160	Peatlands Soil	MKRTIEIGEAVSFTMNTGQCSRGRVIQRIAERRQPVILLIEQANGWRCFRLEDEVKVVDSELLAEASA
Ga0311301_100549196	3300032160	Peatlands Soil	MKRFIPVGEVVSFVMNTGQESTGTVIQRIAERRQPVILLIEQANGWRCFRFEDEVNSSVPASLAAAI
Ga0311301_100858365	3300032160	Peatlands Soil	MKRFIPVGEVVSFVMNTGQAGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVTSPVAAAVTAGSR
Ga0311301_102566604	3300032160	Peatlands Soil	MKRFIPVGEVVSFVMNTGQAGRGVVIERIAERKQPVILLIEQANGWRCFRFEDEVNSPVAGAVATAS
Ga0311301_105397851	3300032160	Peatlands Soil	MKRTIEIGEAVSFTMNTGQSSRGTVIQRIAERRQPVILLIEQANGWRCFRLEDEVKLVETASLVAASA
Ga0311301_108551092	3300032160	Peatlands Soil	VTRRPVRVPWKVEAMKRFIPVGEVVSFVTNTGQAGRGVVIERVAERKQPVILLIEQANGWRCFRFEDEVNSPAPVTTASR
Ga0311301_109210162	3300032160	Peatlands Soil	MKRTIEIGEAVLFTMNTGQASQGTVIERIAERRQPVILLIEQANGWRCFRLEDEVTLVVTESLAEASA
Ga0311301_115588781	3300032160	Peatlands Soil	PDHESPRKVQPMKRTIEIGEAVSFTMNTGQASQGTVIQRIAERRQPVILLIERANGWRCFRLEDEVKLVETESLAEASA
Ga0311301_122506852	3300032160	Peatlands Soil	MNRSISVGEVVSFVMNTGIASQGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVGEPDAALLMVAT
Ga0311301_122511901	3300032160	Peatlands Soil	MKRIIPIGEVVSFVMNTGQAGRGVVIDRIAERKQPVILLIEQANGWRCFRFEDEVRSSASAPVTTGSR
Ga0348332_107672071	3300032515	Plant Litter	MTPFISVGEAVSFVMNTGIESTGLVIQRIAERRQPVILLIEQANGWRCFRFEDEVSPLVPSPLATAI
Ga0348332_115697441	3300032515	Plant Litter	TSARVSREGKPMNRTISVGDVVSFVMNTGIASHGTVIDRIAERRQPVILLIEQANGWRCFRFEDEVSEPDGALLSVAI
Ga0348332_125589471	3300032515	Plant Litter	MQVSISVGETVSFILNTGQTGRGMVIQRIAERRQPVILLIEQANGWRCFRLEEEVTPQHDPAVVALA
Ga0348332_129695742	3300032515	Plant Litter	MKRSIDVGETVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVTAPSTPEPAFATSG
Ga0348332_133913291	3300032515	Plant Litter	MTPFISVGEAVSFVMNTGIASTGVVIQRIAERRQPVILLIEQANGWRCFRFEDEVSPLVPSQLATAI
Ga0348332_136747462	3300032515	Plant Litter	GEAVSFVMNTGIASTGLVIQRIAERRQPVILLIEQANGWRCFRFEDEVSPLVPSPLATAI
Ga0348332_136814341	3300032515	Plant Litter	MNRSILVGELVSFTMNTGVVSTGTVIQRTAERKQPVILLIEQANGWRCFRFEDEVSSQSKPEPALATAG
Ga0335085_121208231	3300032770	Soil	MNRSICVGECVSFVLNTGQASQGFVVDRIAERRQPVILLIEQANGWRCFRFEEEVTPIDASELVMVAD
Ga0335075_108361031	3300032896	Soil	MQRSIPVGELVTFTLNTGQEGRGKVLQRIAERRQPVILLIEQANGWRCFRFEEDVTPVESAAMALSH
Ga0335073_109826413	3300033134	Soil	MKRTIEIGESVAYTMNTGQASQGKVIQRIAERRQPVILLIEQANGWRCFRLEDEVTVVETESLVAASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences