NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F077002

Metagenome Family F077002

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077002
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 75 residues
Representative Sequence MGEPKVGKEVIARLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPQSPPPKGRPVI
Number of Associated Samples 86
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.09 %
% of genes near scaffold ends (potentially truncated) 41.03 %
% of genes from short scaffolds (< 2000 bps) 88.03 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (70.940 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(18.803 % of family members)
Environment Ontology (ENVO) Unclassified
(38.462 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.393 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.51%    β-sheet: 0.00%    Coil/Unstructured: 58.49%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00072Response_reg 16.24
PF00196GerE 15.38
PF00355Rieske 6.84
PF06081ArAE_1 4.27
PF06808DctM 2.56
PF08281Sigma70_r4_2 1.71
PF01464SLT 1.71
PF16868NMT1_3 0.85
PF08028Acyl-CoA_dh_2 0.85
PF14833NAD_binding_11 0.85
PF04542Sigma70_r2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG4129Uncharacterized membrane protein YgaE, UPF0421/DUF939 familyFunction unknown [S] 4.27
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.85
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.85
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.85
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.85
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.94 %
UnclassifiedrootN/A29.06 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004156|Ga0062589_100556337Not Available983Open in IMG/M
3300004463|Ga0063356_101560366All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300004463|Ga0063356_101655118All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria955Open in IMG/M
3300004463|Ga0063356_101952933Not Available886Open in IMG/M
3300004463|Ga0063356_103150742Not Available711Open in IMG/M
3300004463|Ga0063356_103783469All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300004780|Ga0062378_10252048Not Available509Open in IMG/M
3300004808|Ga0062381_10090413All Organisms → cellular organisms → Bacteria → Proteobacteria942Open in IMG/M
3300005093|Ga0062594_100258545All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300005093|Ga0062594_100377254Not Available1131Open in IMG/M
3300005294|Ga0065705_10447394All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005328|Ga0070676_10382242All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300005330|Ga0070690_100328381Not Available1104Open in IMG/M
3300005330|Ga0070690_101613931Not Available526Open in IMG/M
3300005334|Ga0068869_100073291All Organisms → cellular organisms → Bacteria → Proteobacteria2538Open in IMG/M
3300005341|Ga0070691_10192370All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1068Open in IMG/M
3300005343|Ga0070687_100190395All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300005356|Ga0070674_102008760All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria526Open in IMG/M
3300005438|Ga0070701_11305688All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria518Open in IMG/M
3300005441|Ga0070700_101425198Not Available586Open in IMG/M
3300005441|Ga0070700_101578885Not Available560Open in IMG/M
3300005466|Ga0070685_10354431All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300005530|Ga0070679_101239860All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005543|Ga0070672_100660002All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005615|Ga0070702_100072685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2036Open in IMG/M
3300005844|Ga0068862_100212406All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1749Open in IMG/M
3300006844|Ga0075428_100011310All Organisms → cellular organisms → Bacteria → Proteobacteria9930Open in IMG/M
3300006845|Ga0075421_100447676All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300006846|Ga0075430_100414359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1112Open in IMG/M
3300006846|Ga0075430_100614722All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300006847|Ga0075431_102165879All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Pseudoalteromonas → Pseudoalteromonas luteoviolacea510Open in IMG/M
3300006852|Ga0075433_11301087All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria630Open in IMG/M
3300006853|Ga0075420_100398635All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300006853|Ga0075420_100696625Not Available876Open in IMG/M
3300006853|Ga0075420_101380224Not Available605Open in IMG/M
3300006871|Ga0075434_100690893All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300006876|Ga0079217_10077090All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1431Open in IMG/M
3300006894|Ga0079215_10518778Not Available749Open in IMG/M
3300006894|Ga0079215_10532558All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300006918|Ga0079216_10474059All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria816Open in IMG/M
3300007004|Ga0079218_10222225All Organisms → cellular organisms → Bacteria → Proteobacteria1463Open in IMG/M
3300007004|Ga0079218_10426168All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300007004|Ga0079218_11473494All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria734Open in IMG/M
3300009094|Ga0111539_10179339All Organisms → cellular organisms → Bacteria → Proteobacteria2474Open in IMG/M
3300009098|Ga0105245_12742067Not Available546Open in IMG/M
3300009100|Ga0075418_12385923Not Available577Open in IMG/M
3300009156|Ga0111538_11683360All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria799Open in IMG/M
3300009156|Ga0111538_12107227Not Available709Open in IMG/M
3300009156|Ga0111538_12348499Not Available669Open in IMG/M
3300010400|Ga0134122_11966214Not Available622Open in IMG/M
3300010403|Ga0134123_10113381All Organisms → cellular organisms → Bacteria → Proteobacteria2182Open in IMG/M
3300010403|Ga0134123_10448345All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1199Open in IMG/M
3300011400|Ga0137312_1051079All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria683Open in IMG/M
3300011423|Ga0137436_1101778All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria758Open in IMG/M
3300012910|Ga0157308_10253086Not Available622Open in IMG/M
3300013306|Ga0163162_11316891All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300014745|Ga0157377_10128576All Organisms → cellular organisms → Bacteria → Proteobacteria1544Open in IMG/M
3300014871|Ga0180095_1004273All Organisms → cellular organisms → Bacteria1888Open in IMG/M
3300015373|Ga0132257_103258943Not Available591Open in IMG/M
3300017792|Ga0163161_10650152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria874Open in IMG/M
3300018422|Ga0190265_10626170All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300018422|Ga0190265_11885354All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300018432|Ga0190275_10216448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1824Open in IMG/M
3300018432|Ga0190275_10270082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1651Open in IMG/M
3300018465|Ga0190269_11045689Not Available623Open in IMG/M
3300018466|Ga0190268_12147260Not Available520Open in IMG/M
3300018469|Ga0190270_11293824All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria771Open in IMG/M
3300018469|Ga0190270_11737041Not Available678Open in IMG/M
3300018469|Ga0190270_12055058All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria630Open in IMG/M
3300018469|Ga0190270_12660922All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria563Open in IMG/M
3300018481|Ga0190271_10042714All Organisms → cellular organisms → Bacteria → Proteobacteria3785Open in IMG/M
3300018481|Ga0190271_11580085Not Available772Open in IMG/M
3300019362|Ga0173479_10321433Not Available714Open in IMG/M
3300019377|Ga0190264_10274142All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria999Open in IMG/M
3300021184|Ga0196959_10021409All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300025167|Ga0209642_10734538All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria524Open in IMG/M
3300025901|Ga0207688_10282129All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300025907|Ga0207645_10076163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense2148Open in IMG/M
3300025908|Ga0207643_10017324All Organisms → cellular organisms → Bacteria → Proteobacteria3938Open in IMG/M
3300025908|Ga0207643_10856485Not Available589Open in IMG/M
3300025918|Ga0207662_10343685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1000Open in IMG/M
3300025930|Ga0207701_11227292Not Available617Open in IMG/M
3300025935|Ga0207709_11217008Not Available621Open in IMG/M
3300025960|Ga0207651_10377105All Organisms → cellular organisms → Bacteria → Proteobacteria1201Open in IMG/M
3300025981|Ga0207640_10291839All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1286Open in IMG/M
3300026075|Ga0207708_11232392All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria654Open in IMG/M
3300027462|Ga0210000_1001434All Organisms → cellular organisms → Bacteria3371Open in IMG/M
3300027637|Ga0209818_1266739Not Available521Open in IMG/M
3300027691|Ga0209485_1188021All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria637Open in IMG/M
3300027691|Ga0209485_1265264Not Available557Open in IMG/M
3300027880|Ga0209481_10368039All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria735Open in IMG/M
3300027880|Ga0209481_10429725Not Available679Open in IMG/M
3300027886|Ga0209486_10014188All Organisms → cellular organisms → Bacteria → Proteobacteria3628Open in IMG/M
3300027886|Ga0209486_10061143All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1912Open in IMG/M
3300027907|Ga0207428_10144950All Organisms → cellular organisms → Bacteria → Proteobacteria1810Open in IMG/M
3300027907|Ga0207428_10299090All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1191Open in IMG/M
3300027909|Ga0209382_10115285All Organisms → cellular organisms → Bacteria → Proteobacteria3136Open in IMG/M
3300027909|Ga0209382_11038098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales851Open in IMG/M
3300027909|Ga0209382_12290019Not Available508Open in IMG/M
3300028380|Ga0268265_10627423All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300028589|Ga0247818_10177142All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1396Open in IMG/M
3300028590|Ga0247823_11276565All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria550Open in IMG/M
3300028809|Ga0247824_10874145Not Available560Open in IMG/M
3300028812|Ga0247825_10455629All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria907Open in IMG/M
3300031226|Ga0307497_10000374All Organisms → cellular organisms → Bacteria → Proteobacteria10389Open in IMG/M
3300031548|Ga0307408_100171291All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300031858|Ga0310892_10013183All Organisms → cellular organisms → Bacteria → Proteobacteria3444Open in IMG/M
3300031908|Ga0310900_10975291Not Available695Open in IMG/M
3300031911|Ga0307412_10831437All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria804Open in IMG/M
3300031911|Ga0307412_11128188All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300031943|Ga0310885_10122064Not Available1213Open in IMG/M
3300031995|Ga0307409_100716080All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1002Open in IMG/M
3300032002|Ga0307416_100452079All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300032002|Ga0307416_100469009All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1316Open in IMG/M
3300032144|Ga0315910_10174303All Organisms → cellular organisms → Bacteria → Proteobacteria1607Open in IMG/M
3300033550|Ga0247829_10011719All Organisms → cellular organisms → Bacteria → Proteobacteria5172Open in IMG/M
3300033551|Ga0247830_11140336All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria623Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere18.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.53%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil10.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.13%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere5.13%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.13%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.56%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014871Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1DaEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10055633713300004156SoilMGETKLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI*
Ga0063356_10156036623300004463Arabidopsis Thaliana RhizosphereMGEPKVGKEVIAQLVRKLGSAEKAAARLGIRPGLVQRFLEGQSAVPDSVLLKALDAMAEPATPALHPKSPPPKGWPVI*
Ga0063356_10165511833300004463Arabidopsis Thaliana RhizosphereMGEPKVGREVIAQLVRKLGSAEKAATRLGIRPGLVQRFLDGHSQVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI*
Ga0063356_10195293323300004463Arabidopsis Thaliana RhizosphereMGEPKVGKEVIGRLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPQSPPPKGRPVI*
Ga0063356_10315074223300004463Arabidopsis Thaliana RhizosphereMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSPPPKGRPVI*
Ga0063356_10378346913300004463Arabidopsis Thaliana RhizosphereMGEPKVGKEVIAQLVRKLGSAERVAARLGIRPGLVQRFVDGHSQVPDAVLLKALDCLADPATPALQPKSPPP
Ga0062378_1025204813300004780Wetland SedimentMGEPKVGREVIARLVSKLGSVEKAAVRLGIRPGLVRRFVDGTSQVPDAVLLKALDSMSDPVVPALRPVSPPPKGRPVI*
Ga0062381_1009041323300004808Wetland SedimentMGEPKVGREVIARLVSKLGSVEKAAVRLGIRPGLVRRFVDGNSQVPDAVLLKALDSMSDPVVPALRPVSPPPKGRPVI*
Ga0062594_10025854523300005093SoilMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI*
Ga0062594_10037725423300005093SoilAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0065705_1044739423300005294Switchgrass RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKG
Ga0070676_1038224223300005328Miscanthus RhizosphereVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0070690_10032838123300005330Switchgrass RhizosphereKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0070690_10161393113300005330Switchgrass RhizosphereMGETRLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI*
Ga0068869_10007329133300005334Miscanthus RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0070691_1019237023300005341Corn, Switchgrass And Miscanthus RhizosphereNISPMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI*
Ga0070687_10019039533300005343Switchgrass RhizosphereMGEPKLGKEVIARLVSKLGGVEIAAARLGIRPGLVQRFVVGQSAVPDEVLLKALDCMADPATPALRPQSPAPKGRPVI*
Ga0070674_10200876013300005356Miscanthus RhizosphereLHYLCMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSPPPKGRPVI*
Ga0070701_1130568833300005438Corn, Switchgrass And Miscanthus RhizosphereYLCMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSPPPKGRPVI*
Ga0070700_10142519823300005441Corn, Switchgrass And Miscanthus RhizosphereLVSKLGGVEIAAARLGIRPGLVQRFVVGQSAVPDEVLLKALDCMADPATPALRPQSPAPKGRPVI*
Ga0070700_10157888513300005441Corn, Switchgrass And Miscanthus RhizosphereMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSP
Ga0070685_1035443113300005466Switchgrass RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRP
Ga0070679_10123986013300005530Corn RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRP
Ga0070672_10066000223300005543Miscanthus RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPES
Ga0070702_10007268533300005615Corn, Switchgrass And Miscanthus RhizosphereLGKEVIARLVSKLGSVEKAAASLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI*
Ga0068862_10021240633300005844Switchgrass RhizosphereMGEPKLGKEVMARLVRKLGSVERAAASLGIRPGLVQRFLEGQSQVPDSVLLKALDAMADPTTPALRPESPPPKGRPVI*
Ga0075428_100011310103300006844Populus RhizosphereMGEPKVGKEVIGRLVSKLGSVERAAARLGIRPGLVQRFLEGQSRVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI*
Ga0075421_10044767633300006845Populus RhizosphereMGEPKVGKEVIGRLVSKLGSVEKAAARLGIRPGLVQRFLEGQSRVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI*
Ga0075430_10041435933300006846Populus RhizosphereMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVTVPDTILLKALDLMSESAETPVLR
Ga0075430_10061472213300006846Populus RhizosphereVRKLGSAERVAARLGIRPGLVQRFVDGHSQVPDAVLLKALDCLADPATPALQPKSPPPKGRPVI*
Ga0075431_10216587913300006847Populus RhizosphereMGEPKVGKEVIARLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPQSPPPKGRPVI*
Ga0075433_1130108713300006852Populus RhizosphereGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI*
Ga0075420_10039863533300006853Populus RhizosphereMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVTVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI*
Ga0075420_10069662533300006853Populus RhizosphereMGEPKVGKEVIAQLVRKLGSAERVAARLGIRPGLVQRFVDGHSQVPDAVLLKALDCLADPATPALQPKSPPPKGRPVI*
Ga0075420_10138022413300006853Populus RhizosphereMGEPKVGKEVIGRLVSKLGSVEKAAARLGIRPGLVQRFVDGNSQVPDSVLLKALDCMADPAVPA
Ga0075434_10069089323300006871Populus RhizosphereMGEPKVGKEVIARLVSKLGSVEKAAARLGMRPGLVQRFLDGTSQVPDSVLLRALDSMSDPAVPAVHPQSPPPKGRPVI*
Ga0079217_1007709013300006876Agricultural SoilMAERKLGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVDGLSRVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI*
Ga0079215_1051877813300006894Agricultural SoilMAQRKLGQEVISRVVKKLGSVELAATRLGIRPGLVQRFVEGLSPVPDPVLLKALDLVADPDSPVPALQPKSKPPKGRPVI*
Ga0079215_1053255823300006894Agricultural SoilMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVNVPDTTLLKALDLMSESAETPVLRPPHKGPKGRPVI*
Ga0079216_1047405923300006918Agricultural SoilMGAPNAGREVMVRLVRKLGSVELAAARLGIRAGLVQRFTDGLVKVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI*
Ga0079218_1022222523300007004Agricultural SoilMVRLVRKLGSVELAAARLGVRPGLVQRFTDGLVKVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI*
Ga0079218_1042616823300007004Agricultural SoilMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVNVPDAILLKALDLMSESAETPVLRPPHKGPKGRPVI*
Ga0079218_1147349413300007004Agricultural SoilQWRVERIATMAERKLGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVEGLSPVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI*
Ga0111539_1017933933300009094Populus RhizosphereMGETKLGKEVIARLVRKLGSVEKAAVSLGIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI*
Ga0105245_1274206713300009098Miscanthus RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPK
Ga0075418_1238592323300009100Populus RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKG
Ga0111538_1168336013300009156Populus RhizosphereSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI*
Ga0111538_1210722713300009156Populus RhizosphereVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0111538_1234849923300009156Populus RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPV
Ga0134122_1196621423300010400Terrestrial SoilGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0134123_1011338133300010403Terrestrial SoilMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGR
Ga0134123_1044834533300010403Terrestrial SoilGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI*
Ga0137312_105107913300011400SoilMGAPNAGREVMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVKVPDTILLKALDLMTGSGETPALRPASKTPKGRPVI*
Ga0137436_110177823300011423SoilMGEPKLGKEVIGRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDSMSDPVVPALQPQSPPPKGRPVI*
Ga0157308_1025308613300012910SoilMGETKLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGWPVI*
Ga0163162_1131689123300013306Switchgrass RhizosphereMGEQKLGKEVIVRLVRKRGRVEKAAARLGIRPGLVERFVDGTSQVPDSLLLKALDAMSDPVVPALHPQSPP
Ga0157377_1012857623300014745Miscanthus RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQTQSPPPKGRPVI*
Ga0180095_100427333300014871SoilMGERHVGQEVLSRLVRKLGGVEITAVRLGIRPGLVQRFVDGHAQVPDPVLLRALDIMLEPTEPTPALQPESRQPKGRPVI*
Ga0132257_10325894323300015373Arabidopsis RhizosphereMGETKLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESPPPKGRPVI*
Ga0163161_1065015213300017792Switchgrass RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI
Ga0190265_1062617023300018422SoilLRRMGERKLGQEVVARLVRKLGGVEPAAMRLGIRPGLVQRFVDGVATVPDAVLLKALDFMADPAEPTPALRPVSKPPKGRPVI
Ga0190265_1188535413300018422SoilMGERHAGQQVISRLVKKLGSGEIAAVRLGIRPGLVQRFLDGLTAVPDSVLLKALDLIADPVEPPPALQPASK
Ga0190275_1021644833300018432SoilVRKLGSVELAAARLGIRPGLVQRFTDGLVKVPDNVLLKALDLMSESPETPALRPAHKGAKGRPVI
Ga0190275_1027008233300018432SoilMLPMAAPNPGKEVMVRLVRKLGSVELAAARLGIRPGLVQRFADGLVKVPDNVLLKALDLMSESPETPALRPAHKGPKGRPVI
Ga0190269_1104568923300018465SoilRRHSFSRILHVGAPNAGKEVMVRLVRKLGSVELAAARLGIRPGLVQRFIDGLVKVPDPVLLKALDLMTESGETPALRPASKAPKGRPVI
Ga0190268_1214726013300018466SoilMSRITLMAVPNPGREVIVRLVRKLGSVDLAAARLGIRTGLVQRFADGLVKVPDSLLLKALDLMSEPTDTPALRPAHKGPKGRPVI
Ga0190270_1129382413300018469SoilMGAPNAGKEVIARLVRKLGSVEATAARLGLRAGLVQRFAEGLVKVPDPVLLKALDLMSEPAETPALRPASKPPKGRPVI
Ga0190270_1173704123300018469SoilMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVNVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI
Ga0190270_1205505813300018469SoilMGAPNAGREVMVRLVRKLGSVELAAARLGIRAGLVQRFIDGLVKVPDTVLLKALDLMTDSGETPALRPVSKTPKGRPVI
Ga0190270_1266092223300018469SoilAMGAPNAGREVMVRLVRKLGSVELAAARLGVRPGLVQRFTDGLVKVPDPILLKALDLMTGSGETPALRPASKTPKGRPVI
Ga0190271_1004271443300018481SoilMVRLVRKLGSVELAAARLGVRPGLVQRFTDGLVNVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI
Ga0190271_1158008523300018481SoilMLRLVRKLGSAQAVGAPLGISPSLVQRFAEGLIKVPDAVLLKALDLLSEPKDSTPALRPASKASKGRPVV
Ga0173479_1032143313300019362SoilMGETKLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPE
Ga0190264_1027414233300019377SoilMGERKLGQEVVARLVRKLGGVEPAAMRLGIRPGLVQRFVDGVATVPDAVLLKALDFMADPAEPTPALRPVSKPPKGRPVI
Ga0196959_1002140923300021184SoilMAERKLGQEVIARVVKKLGSNELAAARLGIRPGLVQRFVDGLSQVPDPVLLKALDLVADPDSPVQALQPKS
Ga0209642_1073453823300025167SoilQELIARLVHKLGSAEVAAARLGIRATLVERFAEGLVKVPDSILLKALDLMAESAETPALRPASKPPKGRPVI
Ga0207688_1028212923300025901Corn, Switchgrass And Miscanthus RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLKALDAMSDPAVPALHPQSPPPKGRPVI
Ga0207645_1007616333300025907Miscanthus RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI
Ga0207643_1001732433300025908Miscanthus RhizosphereMGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVEGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI
Ga0207643_1085648523300025908Miscanthus RhizosphereVAATGLCDIAAMGEPKVGKEVIAQLVRKLGSAEKAAARLGIRPGLVQRFLEGQSAVPDSVLLKALDAMAEPATPALHPKSP
Ga0207662_1034368533300025918Switchgrass RhizosphereMGEPKLGKEVIARLVSKLGGVEIAAARLGIRPGLVQRFVVGQSAVPDEVLLKALDCMADPATPALRPQSPAPKGRPVI
Ga0207701_1122729213300025930Corn, Switchgrass And Miscanthus RhizosphereMGETKLGKEVIARLVSKLGSVEKAAVSLSIRPGLVQRFLEGQSPVPVAVLLRALDAMADPATPALRP
Ga0207709_1121700823300025935Miscanthus RhizosphereMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSPPPQSTHCR
Ga0207651_1037710513300025960Switchgrass RhizosphereMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPA
Ga0207640_1029183923300025981Corn RhizosphereMGEQKLGKEMIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI
Ga0207708_1123239213300026075Corn, Switchgrass And Miscanthus RhizosphereLVSKLGGVEIAAARLGIRPGLVQRFVVGQSAVPDEVLLKALDCMADPATPALRPQSPAPKGRPVI
Ga0210000_100143423300027462Arabidopsis Thaliana RhizosphereMAERKVGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVDGSSQVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI
Ga0209818_126673913300027637Agricultural SoilMAQRKLGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVDGLSRVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI
Ga0209485_118802113300027691Agricultural SoilWRVERIATMAERKLGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVDGLSRVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI
Ga0209485_126526413300027691Agricultural SoilMAQRKLGQEVISRVVKKLGSVELAATRLGIRPGLVQRFVEGLSPVPDPVLLKALDLVADPDSPVPALQPKSKPPKGRPVI
Ga0209481_1036803923300027880Populus RhizosphereMGEPKVGKEVIGRLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPKSPPPKGRPVI
Ga0209481_1042972513300027880Populus RhizosphereIAAMGEPKVGKEVIGRLVSKLGSVEKAAARLGIRPGLVQRFLEGQSRVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI
Ga0209486_1001418833300027886Agricultural SoilMVRLVRKLGSVELAAARLGVRPGLVQRFTDGLVKVPDTILLKALDLMSESAETPVLRPPHKGPKGRPVI
Ga0209486_1006114333300027886Agricultural SoilMAERKLGQEVISRLVKKLGSIELAAARLGIRPGLVQRFVDGLSRVPDPVLLKALDLVADPDSPVQALQPKSKPPKGRPVI
Ga0207428_1014495023300027907Populus RhizosphereMGETKLGKEVIARLVRKLGSVEKAAVSLGIRPGLVQRFLEGQSPVPDAVLLRALDAMADPATPALRPESAPPKGRPVI
Ga0207428_1029909023300027907Populus RhizosphereLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI
Ga0209382_1011528523300027909Populus RhizosphereMGEPKVGKEVIGRLVSKLGSVEKAAARLGIRPGLVQRFLEGQSRVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI
Ga0209382_1103809823300027909Populus RhizosphereMGEPKVGKEVIARLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPQSPPPKGRPVI
Ga0209382_1229001923300027909Populus RhizosphereVIAQLVRKLGSAERVAARLGIRPGLVQRFVDGHSQVPDAVLLKALDCLADPATPALQPKSPPPKGRPVI
Ga0268265_1062742313300028380Switchgrass RhizosphereMGEPKLGKEVMARLVRKLGSVERAAASLGIRPGLVQRFLEGQSQVPDSVLLKALDAMADPTTPALRPESPPPKGRPVI
Ga0247818_1017714233300028589SoilVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI
Ga0247823_1127656513300028590SoilEVMVRLVRKLGSVELAAARLGIRAGLVQRFIDGLVKVPDTVLLKALDLMTDSGETPALRPVSKTPKGRPVI
Ga0247824_1087414513300028809SoilMGEPKVGREVIAQLVRKLGSAERAAARLGIRPGLVQRFLDGQSRVPDSVLLKALDAMAEPATPALHPKSPPPKGRPVI
Ga0247825_1045562933300028812SoilMGEPKVGREVIAQLVRKLGSAEKAATRLGIRPGLVQRFLDGHSQVPDAVLLKALDCMADPVTPALQPKSPPPKGRPVI
Ga0307497_10000374143300031226SoilMGEPKLGREVISRLVSKLGSVEKAAARLGIRPGLVQRFADGTSPVPDAVLLKALDSMSDPVVPALQPQSPPPKGRPVI
Ga0307408_10017129123300031548RhizosphereMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVKVPDNVLLKALDLMSESAEIPALRPAHKGPKGRPVI
Ga0310892_1001318333300031858SoilMGEPKLGKEVMARLVRKLGSVERAAASLGIRPGLVQRFLEGQSQVPDSVLLKALDAMADPTTPALRPASPPPKGRPVI
Ga0310900_1097529123300031908SoilLCNILAMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDQVLLRALDAMSDPAVPALHPQSPPPKGRPVI
Ga0307412_1083143723300031911RhizosphereEVMVRLVRKLGSVELVAGRLGVRPGLVQRFAEGLVKVPDTVLLKALDLMAESGETPALRPPSKPPKGRPVI
Ga0307412_1112818813300031911RhizosphereMAERKLGQEVISRVVKKLGSVELAAARLGIRPGLVQRFVEGLSPVPDPVLLKALDLVADPDSAVQAL
Ga0310885_1012206423300031943SoilMGAPKVGKEVIARLVSKLGSVEKAAARLGIRPGLVQRFVEGQSQVPDEVLLKALDAMSDPAVPALHPQSPPPKGRPVI
Ga0307409_10071608023300031995RhizosphereMAERKLGQEVISRVVKKLGSVELAAARLGIRPGLVQRFVDGLSPVPDPVLLKALDLVSDPDSSVQALQPKSKPPKGRPVI
Ga0307416_10045207923300032002RhizosphereMAERKLGQEVISRVVKKLGSVELAAARLGIRPGLVQRFVEGLSPVPDPVLLKALDLVSDPDSPVQALQPKSKPPKGRPVI
Ga0307416_10046900923300032002RhizosphereMVRLVRKLGSVELVAGRLGVRPGLVQRFAEGLVKVPDTVLLKALDLMAESGETPALRPPSKPPKGRPVI
Ga0315910_1017430323300032144SoilMVRLVRKLGSVELAAARLGIRPGLVQRFTDGLVKVPDAVLLKALDLMTGSGETPALRPASKTPKGRPVI
Ga0247829_1001171923300033550SoilMGEPKVGKEVIGRLVAKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSVLLKALDFMADPAVPALQPQSPPPKGRPVI
Ga0247830_1114033613300033551SoilGEQKLGKEVIVRLVSKLGSVEKAAARLGIRPGLVQRFVDGTSQVPDSLLLKALDAMSDPVVPALQPQSPPPKGRPVI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.