Metagenome Family F077072

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077072
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	75 residues
Representative Sequence	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPF
Number of Associated Samples	84
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.58 %
% of genes near scaffold ends (potentially truncated)	99.15 %
% of genes from short scaffolds (< 2000 bps)	83.76 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.598 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.026 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.55% β-sheet: 9.80% Coil/Unstructured: 67.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF09832	DUF2059	5.13
PF12697	Abhydrolase_6	3.42
PF05117	DUF695	2.56
PF00903	Glyoxalase	2.56
PF06348	DUF1059	2.56
PF13649	Methyltransf_25	2.56
PF04191	PEMT	1.71
PF01262	AlaDh_PNT_C	1.71
PF03992	ABM	1.71
PF14499	DUF4437	1.71
PF14534	DUF4440	1.71
PF12681	Glyoxalase_2	1.71
PF01872	RibD_C	1.71
PF00069	Pkinase	1.71
PF07883	Cupin_2	1.71
PF13564	DoxX_2	0.85
PF14085	DUF4265	0.85
PF00583	Acetyltransf_1	0.85
PF00107	ADH_zinc_N	0.85
PF04029	2-ph_phosp	0.85
PF08818	DUF1801	0.85
PF05050	Methyltransf_21	0.85
PF00144	Beta-lactamase	0.85
PF03575	Peptidase_S51	0.85
PF07676	PD40	0.85
PF12840	HTH_20	0.85
PF01139	RtcB	0.85
PF07927	HicA_toxin	0.85
PF00326	Peptidase_S9	0.85
PF13365	Trypsin_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.84
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.71
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.71
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	1.71
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.85
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.85
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	39.32 %
Unclassified	root	N/A	9.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	38.46 %
Unclassified	root	N/A	9.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.13 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	4.27 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Armatimonadota incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis	4.27 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1.71 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Candidatus Nitrosymbiomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas	4.27 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.71 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.85 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.85 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Candidatus Nitrosymbiomonas proteolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	4.27 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.71 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.85 %
Limnobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter	0.85 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.85 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Candidatus Nitrosymbiomonas proteolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	4.27 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.71 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.85 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.85 %
unclassified Limnobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter	0.85 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Candidatus Nitrosymbiomonas proteolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	4.27 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.71 %
Limnobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter → Limnobacter sp.	0.85 %
Pontibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Pontibacter	0.85 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.85 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	35.04 %
Unclassified	root	N/A	9.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Candidatus Nitrosymbiomonas proteolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	4.27 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.71 %
Pontibacter cellulosilyticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Pontibacter → Pontibacter cellulosilyticus	0.85 %
Limnobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter → Limnobacter sp.	0.85 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.85 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Blastocatellia bacterium AA13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10193017	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004157\|Ga0062590_101218268	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300004157\|Ga0062590_102753579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	525	Open in IMG/M
3300005167\|Ga0066672_11016354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300005171\|Ga0066677_10244757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300005174\|Ga0066680_10372088	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300005177\|Ga0066690_10426244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	899	Open in IMG/M
3300005178\|Ga0066688_10062152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2193	Open in IMG/M
3300005180\|Ga0066685_10181580	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300005180\|Ga0066685_10844984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300005181\|Ga0066678_10516753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	793	Open in IMG/M
3300005353\|Ga0070669_101659380	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005406\|Ga0070703_10080872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300005406\|Ga0070703_10243927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300005440\|Ga0070705_100238079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1270	Open in IMG/M
3300005440\|Ga0070705_101949381	Not Available	500	Open in IMG/M
3300005445\|Ga0070708_101052579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	762	Open in IMG/M
3300005466\|Ga0070685_10911268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	655	Open in IMG/M
3300005468\|Ga0070707_101287056	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005468\|Ga0070707_101913395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300005471\|Ga0070698_102035919	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005518\|Ga0070699_101520229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300005536\|Ga0070697_100182415	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300005545\|Ga0070695_100291166	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005561\|Ga0066699_10506475	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005576\|Ga0066708_10204102	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300005586\|Ga0066691_10683591	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300006032\|Ga0066696_11102818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300006797\|Ga0066659_10481860	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006797\|Ga0066659_10544991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	936	Open in IMG/M
3300006797\|Ga0066659_11714452	Not Available	530	Open in IMG/M
3300006800\|Ga0066660_11041839	Not Available	654	Open in IMG/M
3300006844\|Ga0075428_101645028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300006852\|Ga0075433_11612748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300006854\|Ga0075425_100336838	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300006871\|Ga0075434_102020905	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300006904\|Ga0075424_101213536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	803	Open in IMG/M
3300007258\|Ga0099793_10026894	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300007258\|Ga0099793_10297234	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300007265\|Ga0099794_10566721	Not Available	600	Open in IMG/M
3300009038\|Ga0099829_10008466	All Organisms → cellular organisms → Bacteria	6522	Open in IMG/M
3300009038\|Ga0099829_10221328	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300009088\|Ga0099830_10035767	All Organisms → cellular organisms → Bacteria → Proteobacteria	3399	Open in IMG/M
3300009088\|Ga0099830_10118432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2001	Open in IMG/M
3300009089\|Ga0099828_10056391	All Organisms → cellular organisms → Bacteria	3281	Open in IMG/M
3300009089\|Ga0099828_10611383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	981	Open in IMG/M
3300009094\|Ga0111539_12885171	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300009137\|Ga0066709_103392997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300009147\|Ga0114129_10941404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1092	Open in IMG/M
3300009162\|Ga0075423_10802769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	996	Open in IMG/M
3300010362\|Ga0126377_12483623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300010362\|Ga0126377_12810264	Not Available	561	Open in IMG/M
3300010371\|Ga0134125_11794478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	667	Open in IMG/M
3300010396\|Ga0134126_11365027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300010396\|Ga0134126_12205499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300010399\|Ga0134127_10825817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium AA13	977	Open in IMG/M
3300010400\|Ga0134122_10669861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	970	Open in IMG/M
3300011269\|Ga0137392_10608011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	907	Open in IMG/M
3300011270\|Ga0137391_10074622	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300011271\|Ga0137393_10090854	All Organisms → cellular organisms → Bacteria → Proteobacteria	2475	Open in IMG/M
3300011271\|Ga0137393_10239028	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300012096\|Ga0137389_10087782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2446	Open in IMG/M
3300012096\|Ga0137389_10180928	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300012096\|Ga0137389_10230476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1551	Open in IMG/M
3300012200\|Ga0137382_10385610	Not Available	986	Open in IMG/M
3300012202\|Ga0137363_10079916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2433	Open in IMG/M
3300012203\|Ga0137399_10065192	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300012203\|Ga0137399_10117763	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300012203\|Ga0137399_10364901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1201	Open in IMG/M
3300012203\|Ga0137399_10561163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300012361\|Ga0137360_10250596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1454	Open in IMG/M
3300012362\|Ga0137361_10593854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300012469\|Ga0150984_102752477	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012683\|Ga0137398_10203294	Not Available	1307	Open in IMG/M
3300012907\|Ga0157283_10071510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadota incertae sedis → Candidatus Nitrosymbiomonas → Candidatus Nitrosymbiomonas proteolyticus	858	Open in IMG/M
3300012917\|Ga0137395_11091093	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012923\|Ga0137359_11005186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300012925\|Ga0137419_10057580	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300012925\|Ga0137419_11498456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300012927\|Ga0137416_10044621	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300012927\|Ga0137416_11555873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300012927\|Ga0137416_12149575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300012944\|Ga0137410_10696054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	847	Open in IMG/M
3300012944\|Ga0137410_12055693	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012944\|Ga0137410_12112344	Not Available	502	Open in IMG/M
3300014324\|Ga0075352_1058846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300015054\|Ga0137420_1120193	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300015054\|Ga0137420_1135879	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300015054\|Ga0137420_1279889	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300015054\|Ga0137420_1385063	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300015241\|Ga0137418_10141995	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2123	Open in IMG/M
3300018431\|Ga0066655_11199416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300018433\|Ga0066667_10698263	Not Available	851	Open in IMG/M
3300018468\|Ga0066662_12049454	Not Available	599	Open in IMG/M
3300018482\|Ga0066669_12356501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300021086\|Ga0179596_10395287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300024330\|Ga0137417_1322966	All Organisms → cellular organisms → Bacteria	4152	Open in IMG/M
3300024330\|Ga0137417_1364785	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300025922\|Ga0207646_10854839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300025922\|Ga0207646_11303193	Not Available	634	Open in IMG/M
3300026313\|Ga0209761_1339105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300026315\|Ga0209686_1159636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter → Limnobacter sp.	669	Open in IMG/M
3300026335\|Ga0209804_1051808	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300026524\|Ga0209690_1099387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300026529\|Ga0209806_1058239	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300027643\|Ga0209076_1039231	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300027643\|Ga0209076_1070630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300027748\|Ga0209689_1217957	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300027748\|Ga0209689_1231758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	781	Open in IMG/M
3300027875\|Ga0209283_10145969	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300027910\|Ga0209583_10668967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300028536\|Ga0137415_10064504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3526	Open in IMG/M
3300028536\|Ga0137415_10444964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1101	Open in IMG/M
3300031720\|Ga0307469_10321608	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Pontibacter → Pontibacter cellulosilyticus	1285	Open in IMG/M
3300031720\|Ga0307469_10851962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	840	Open in IMG/M
3300032180\|Ga0307471_100358808	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300032205\|Ga0307472_101494576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.45%
Host-Associated	Host-Associated	8.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.60%
Plants	Host-Associated → Plants	8.55%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.55%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.07%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_101930171	3300002917	Grasslands Soil	MNRAHYGAVAAGALLLTLPRSLRQEPTNPAAAVVKSPILVRAEELRWEDCSAAIPRGPKCATLE
Ga0062590_1012182681	3300004157	Soil	MNSVQYGAVVAGALLLAFPGSLRQQPTNPAAAVVQSPIMVRAEAMKWEDCTAALPHGPQCASLEGDRTVANMPFTYRLKLPDGYRIPPHV
Ga0062590_1027535792	3300004157	Soil	MNRVQYGTVAAGALLLTLPGSLRQEPMNPAAAVVKSHIMVRADEMKWESCSAALPRGPQCASL
Ga0066672_110163542	3300005167	Soil	VNRLHYGAVAAGAIALTLPGSPGQEPTNAAAAVAKAPIMVRGDEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYR
Ga0066677_102447571	3300005171	Soil	VNRLHYGAVAAGAIALTLPGAPGQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEG
Ga0066680_103720882	3300005174	Soil	VNRLHYGAVAAGAVALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEGDRT
Ga0066690_104262442	3300005177	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKAPIVVRAEEMTWEACSAALPRGPKCATLEGDRTVANMPFTYRLKIPDGYHIP
Ga0066688_100621521	3300005178	Soil	VNRLHYGAVAAGAVALTLPGLPRQEPMNPAAAVAKAPIMVRGDEMRWEDCSAALPRGPKCATLEGDRTVANVPFTYRLKI
Ga0066685_101815803	3300005180	Soil	VNRLHYGAVAAGAVALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEGDRTVA
Ga0066685_108449841	3300005180	Soil	MNRAHYGALAAGALLLTLPVSLRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEGDRTVA
Ga0066678_105167531	3300005181	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKAPILVRAEEMRWEACSAAIPRGPKCATLEGDRTVANMPFTYRLKI
Ga0070669_1016593801	3300005353	Switchgrass Rhizosphere	MNRVQYGTVAAGALLLTLPGSLRQEPMNPAAAVVKSPIMVGADEMKWESCSAALPRGPQCASLEGDRTVAHMPF
Ga0070703_100808721	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLHHGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPIMVRAEEMRWEACSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYHIPP
Ga0070703_102439271	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MNRVHYGAVAAGALLLTLPAPLRQEPTNPAAAVAKSPILVRAEEMKWEACSAALPRGPKCATLE
Ga0070705_1002380791	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNRAHYGAVAAGALLLTLPGSLGQEPTNPAAAVVKSPILVRAEELRWEACSAAIPRGPKCATLEGDRTVANV
Ga0070705_1019493812	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSRAHYGAVAAGALLLTLPASLRQEPTNPAAAVAKSPILVRAEELRWEACSAAIPRGPKC
Ga0070708_1010525793	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNGAHYGAVAAGALLLTLRASLRQEPTNPAAAVVKSPILVRAEELRWEACSAAIPRGPKCATLEGDRTVAN
Ga0070685_109112681	3300005466	Switchgrass Rhizosphere	MNRVQYGTVAAGALLLTLPGSLRQEPMNPAAAVVKSHIMVRADEMKWESCSAALPRGPQCASLQGDRTVAHMPFTYRLKLPDGY
Ga0070707_1012870561	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLHHGAVAAGALLLTLPGSRQEPTNPAAAVVKSPIMVRAEEMRWEACSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYHIPPHF
Ga0070707_1019133951	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNRVHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPIMVRAEEMRWEACSAAIPRGPKCATLEGDRTVANVPF
Ga0070698_1020359191	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLHHGAVAAGALLLTLPGSRQEPTNPAAAVVKSPIMVRAEEMRWEACSAALPRGPKCATLEGDRTVANVP
Ga0070699_1015202292	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNRVHYGAVAAGALLLTLPAPLRQEPTNPAAAVAKSPILVRAEEMKWEACSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYH
Ga0070697_1001824153	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPIMVRAEEMRWEACSAALPRGPK
Ga0070695_1002911661	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNGAHYGAVAAGALLLTLRASLRQEPTNPAAAVVKSPILVRAEELRWEACSAAIPRGPKCATLEGDRTVANVPFTYRLKIPDGYHIPPH
Ga0066699_105064752	3300005561	Soil	VNRLHYGAVAAGAIALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEG
Ga0066708_102041021	3300005576	Soil	MNRTHYKAVAVGALLLTLPGSLRQEPTNPAAAVVKSPILVRAEEMRWEDCSAAIPRGPKCASLEGDRTV
Ga0066691_106835911	3300005586	Soil	MNKAHCGAVAAGALLLTLPGSLRQEPTSPILVRAEEMRWEDCSAAIPRGPKCA
Ga0066696_111028181	3300006032	Soil	MNGLHYGTLAAWALLLTLPGSLRQEPTNPAATVVKSPITVRAEEMKWEACTAALPRGPQCAALEGDRTVANVPFTYRLKLPDG
Ga0066659_104818601	3300006797	Soil	MNRGHYGAVTAVALLLTLPGSLRQEPTNPAAAVAKSPLLVRAAELRWEDCSAALPRGPKCATLE
Ga0066659_105449911	3300006797	Soil	VNRLHYGAVAAGAVALTLPGSPRQEPMNPAAAVAKAPVMVRGDEMRWEDCSAALPRGPKCATLE
Ga0066659_117144521	3300006797	Soil	VNRLYYGAVAAGAVALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCAT
Ga0066660_110418392	3300006800	Soil	VNRLHYGAVAAGAVALTLPGSPRQEPMNPAAAVAKAPIMVRGDEMRWEDCSAALPRGPKC
Ga0075428_1016450281	3300006844	Populus Rhizosphere	MNRVHYWAVAAGALLLTLPGSPRQEPTNPAAAVVKSPILVRAEELRWEACTAALPRGPQCASLEGDRTVANVPF
Ga0075433_116127481	3300006852	Populus Rhizosphere	MNRVRYGVVAAGALLLTLPSLLRQEPTNPAAAVAKSPITVRAEEMKWEACSAALPRGPQCATLEGDRTVANMPFTYR
Ga0075425_1003368383	3300006854	Populus Rhizosphere	MNRIGYGAVAAAALLLTIPASLQQQPTNPAAAVAKSPVMVRAAELKWEACTAALPHGPQCASVEGDRTVANMPFTYRLKLPDGYRIPPHVH
Ga0075434_1020209051	3300006871	Populus Rhizosphere	VNRLHYGTVAAGALLLTLPGSPRQEPTNPAAAAAKAPIMVRAEELRWEACTAALPRGPQCATIEGDRTV
Ga0075424_1012135361	3300006904	Populus Rhizosphere	MNRVQYGTVAAGALLLTLPGSLRQEPMNPAAAVVKSPIMVGADEMKWKNCSAALPRGPQCVSLEGDRTVAHMPFTYRLKLPDGY
Ga0099793_100268941	3300007258	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLK
Ga0099793_102972342	3300007258	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPASRHQDPTNPAAAVAKSPILVRAEELRWEACSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYRI
Ga0099794_105667211	3300007265	Vadose Zone Soil	MNRAHYGAAAAGALLLTVPGSLRQEPTNPAAAVAKSPILVRAEEMRWEACSAALPRGPKCATLE
Ga0099829_1000846610	3300009038	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSTILVRAEELSWEACSAAIPRGPKCATLEGDRTVANVPFTYRLKIPDG
Ga0099829_102213282	3300009038	Vadose Zone Soil	MNRAQYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGY
Ga0099830_100357677	3300009088	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRT
Ga0099830_101184323	3300009088	Vadose Zone Soil	MNRAHYEAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANV
Ga0099828_100563916	3300009089	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTY
Ga0099828_106113831	3300009089	Vadose Zone Soil	MNRAHYEAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPD
Ga0111539_128851712	3300009094	Populus Rhizosphere	MNRVGYGAAAGALLLTLPGSLRQQPTNPAAAVVKSPIMVRADEMKWAACTAALPRGPQCA
Ga0066709_1033929972	3300009137	Grasslands Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKAPIVVRAEEMIWEACSAALPRGPKCATLEGDRTVAN
Ga0114129_109414042	3300009147	Populus Rhizosphere	MDSLCICDSTDANTGGTIAVNRLHYGAVAAGALLLTLSRSLRQEPTNPAAAVVKSPIMVRAEEMRWEACSAALPRGPKCATLEGDRTVA
Ga0075423_108027693	3300009162	Populus Rhizosphere	MNRVQYGTVAAGALLLTLPGSLSQEPTNPAAAVVKSPIMVGADEMKWESCSAALPRGPQCVSLEGDR
Ga0126377_124836233	3300010362	Tropical Forest Soil	LMLPGSPRQQPTNPAAAVVKSPMMVRAGEMKWEACTAALPRGPQCAALEGDRTVANVPFTYRL*
Ga0126377_128102642	3300010362	Tropical Forest Soil	MNRVHYGAVTCAVLLLTLPGSLRQEPTNPAAAVAKSPILGRADELRWENCTAALPRGPKCATVEGDRTVAHLGPRGSAAV
Ga0134125_117944782	3300010371	Terrestrial Soil	MNTAHYGAVAAGVLLLTLPGSLGQEPTNPAAALVKSPILVRAEELRWEACSAAIPRGPKCATLEG
Ga0134126_113650272	3300010396	Terrestrial Soil	MNRVHYGAAAAGALLLALPASPRQEPTNPAAAVAKAPILVRAEELRWEACTAALPRGPQCATVEGDRTVANVPFTYRLKIPDGYH
Ga0134126_122054992	3300010396	Terrestrial Soil	MNRVHYGAVAAGALLLTLPAPLRQEPTNPAAAVAKSPILVRAEEMKWEACSAALPRGP
Ga0134127_108258171	3300010399	Terrestrial Soil	MNRVHYGAVAAGALLLTLPAPLRQEPTNPAAAVAKSPILVRAEEMKWEACSAALPRGPKCATLEG
Ga0134122_106698611	3300010400	Terrestrial Soil	MNRVHYGAAAAGALLLALPASPRQEPTNPAAAVAKAPILVRAEELRWEACTAALPRGPQCATLEGDRTVANVP
Ga0137392_106080112	3300011269	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPD
Ga0137391_100746225	3300011270	Vadose Zone Soil	MNRAHYEAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGY
Ga0137393_100908545	3300011271	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPSWVRAEEMEWGDCSAAIPRGPKCATHEGD
Ga0137393_102390281	3300011271	Vadose Zone Soil	MKRAQYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPD
Ga0137389_100877821	3300012096	Vadose Zone Soil	MNRAQYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRT
Ga0137389_101809283	3300012096	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDRTVA
Ga0137389_102304764	3300012096	Vadose Zone Soil	MNRAHYGAAAAGALLLTVPGSLRQEPTNPAAAVAKSPILVRAEEMRWENCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYH
Ga0137382_103856102	3300012200	Vadose Zone Soil	VNRLHYGAVAAGAIALTLPGSPRQEPTNPAAAVDKSPLLVRAEELRWEDCSAALPREPKC
Ga0137363_100799165	3300012202	Vadose Zone Soil	MNRAHFGAAAAGALLLTVPGSLRQEPTNPAAAVAKSPILVRAEEMRWEACSAAIPRGPKCATLEGDRTAANVPFTYRLKIPDGYHIP
Ga0137399_100651925	3300012203	Vadose Zone Soil	MNRAHYGAVAGALLLTLPGSLRQEPTNPAAAVVKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGYRV
Ga0137399_101177631	3300012203	Vadose Zone Soil	MNRAHCGAVAAGALLLTLPGSRRQEPTNPAAAVAKSPILVRAEELRWEACSAALPRGPKCATLEGDRTVANVPFTYRLKIPD
Ga0137399_103649012	3300012203	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILMRAEEMRWEPCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYRI
Ga0137399_105611631	3300012203	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILMRAEELRWEPCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYRIPAHF
Ga0137360_102505964	3300012361	Vadose Zone Soil	MNRAHYGAAAAGALLLTVPGSLRQEPTNPAAAVAKSSILVRAEEMRWEACSAAIPRGPQCATLEGDRTVANV
Ga0137361_105938543	3300012362	Vadose Zone Soil	MNRAHYGAAAAGALLLTVPGSLRQEPTNPAAAVAKSPILVRAEEMRWEACSAAIPRGPQCATLEGDRTVANVPFTYRLKIPDGYHIPPH
Ga0150984_1027524772	3300012469	Avena Fatua Rhizosphere	MAMNRVHYGAVAAGALLLTLPSLLRQEPTNPAAAVAKSPIMVRAEQMKCEACSTALPRGPQCASLEGDRAV
Ga0137398_102032943	3300012683	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKIPGGY
Ga0157283_100715102	3300012907	Soil	MNRVQYGTVAAGALLLTLPGSLRQEPMNPAAAVVKSHIMVRADEMKWESCSAALPRGPQCASLQGDRTVAHMPFTYRLKLPDGYRI
Ga0137395_110910931	3300012917	Vadose Zone Soil	MTRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRAEELRWEDCSAAIPRGPKC
Ga0137359_110051861	3300012923	Vadose Zone Soil	VKRLHYGAVAAAAIALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEGDRTVANQPFTYRL
Ga0137419_100575801	3300012925	Vadose Zone Soil	MNRAHYGAVAGALLLTLPGSLRQEPTNPAAAVVKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGY
Ga0137419_114984561	3300012925	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVATSTILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVP
Ga0137416_100446216	3300012927	Vadose Zone Soil	MNRAHYGAVAGALLLTLPGSLRQEPTNPAAAVVKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPF
Ga0137416_115558731	3300012927	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILMRAEEMRWEPCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDG
Ga0137416_121495751	3300012927	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILMRAEELRWEPCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYRI
Ga0137410_106960541	3300012944	Vadose Zone Soil	MNRAQYGAVAAGALLLALPGSLRQEPTNPAAAVAKPPILVRAEELRWEDCSAAIPRGPKCATLEGDRTVANVPFTY
Ga0137410_120556932	3300012944	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEELRWEACSAALPRGPKC
Ga0137410_121123442	3300012944	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPASRHQEPTNPAAAVAKSPILVRAEELRWEACSAALPRGPKCATLEG
Ga0075352_10588461	3300014324	Natural And Restored Wetlands	MYRVHYGAVAAGALLLTLPVSLRQEPTNPAAAVAKSPTMVRAEELRWEACTAALPRGPQCASLEGDRTVANMP
Ga0137420_11201931	3300015054	Vadose Zone Soil	MKMTLHANTRGGTIAMNRAHCGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTAANVPFTYRLKIPDGYHIPRRLP
Ga0137420_11358792	3300015054	Vadose Zone Soil	VNRLRYGAVAAWAIALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWENCSAALPRGPKCATLEGDR
Ga0137420_12798891	3300015054	Vadose Zone Soil	MKMTLHANTRGGTIAMNRAHCGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTAANVPFTYRLKIPDGYHIQIPDG
Ga0137420_13850631	3300015054	Vadose Zone Soil	MKMTLHANTRGGTIAMNRAHCGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILMRAEELRWEPCSAALPRGPKCATLEGDRTVANVP
Ga0137418_101419954	3300015241	Vadose Zone Soil	MNRVHYGAVAAGAIALTLPGSPRQEPTNPAAAVAKVPIMVRGDEMRWEDCSAALPHGPKCATLEGDRTVA
Ga0066655_111994162	3300018431	Grasslands Soil	MNGLHYGTLAAWALLLTLPGSLRQEPTNPAPAVVKSPITVRAEEMKWEACTAALPRGPQCAALEGDRTVANVPSTYRLKLPDEYPIPPH
Ga0066667_106982631	3300018433	Grasslands Soil	MNRAHYGALAAGALLLTLPVSLRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCAT
Ga0066662_120494541	3300018468	Grasslands Soil	VNRLHYGAVAAGAIALTLPGSPGQEPTNAAAAVAKAPIMVRGDEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLK
Ga0066669_123565011	3300018482	Grasslands Soil	VKRLHYGAVAAGAVALTLPGSPRQEPMNPAAAVAKAPIIVRGDEMRWEDCSAALPRGPKCATLE
Ga0179596_103952871	3300021086	Vadose Zone Soil	VNRLHYGAVAAGAIALTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWEDCSAALPRGPKCATLEGDRTVANQ
Ga0137417_13229664	3300024330	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVATSTILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGYRVPATHPPS
Ga0137417_13647851	3300024330	Vadose Zone Soil	VNRLHYGAVAAGAIALTLPGLPRQEPTNPAAAVAKSPLMVRAEDLRWEDCSAALPRGPKCATLE
Ga0207646_108548392	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNRVHYGAVAAGALLLTLPAPLRQEPTNPAAAVAKSPILVRAEEMKWEACSAALPRGPQCATLEGDRTVANLPFTYRLKL
Ga0207646_113031932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VNRLHYGAVTAGALLLTLPGSPRQEPTNPAAAVAPIMVRTEELRWEACTAALPRGPQCATLEGGALGSAW
Ga0209761_13391051	3300026313	Grasslands Soil	MNRARYGAVVAGALLLTLPRSLRQEPTNPAAAVAKSPMLVRAEEMTWEACSAAIPRGPKCATLEGD
Ga0209686_11596361	3300026315	Soil	MNRTHYGAVAAGALLLTLPGSPRQEPTNPAAAVAKSPLLVRAEELRWGDCSAALPRGPKCATLEGDRTVANVPFTYRLKIPDGYHI
Ga0209804_10518085	3300026335	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKAPIVVRAEEMTWEACSAALPRGPKCATLEGDRTVANMPFTYRLKIPDGYHIPAHVHPADAHL
Ga0209690_10993871	3300026524	Soil	MNRARYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEQMRWEACSAALPRGPK
Ga0209806_10582393	3300026529	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKAPILVRAEEMRWEACSAAIPRGPKCATLEGDRTVANMPFTYRLKIPDGYHIP
Ga0209076_10392311	3300027643	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPKCATLEGDRTVANVPF
Ga0209076_10706303	3300027643	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEACSAALPRGP
Ga0209689_12179572	3300027748	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKAPIMVRGDELRWEDCSAAIPRGPKCATLEGDRTVANVPFTYR
Ga0209689_12317582	3300027748	Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKAPILVRAEEMRWEACSAAIPRGPKCATLEGDRTVANMPFTYRLKIPDGYHI
Ga0209283_101459691	3300027875	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPILVRVEEMRWEDCSAAIPRGPKCATLEGDPLGSASKNWCRARRDD
Ga0209583_106689671	3300027910	Watersheds	VNRLHYGAVAAGALLLTLPGSLRQEPTNPAAAVVKSPIMVRAEAMRWEDCSAAIPRGPKCATLEGDRTVANVPFTYRLKLPDGYHVQSNKPRDPDLI
Ga0137415_100645041	3300028536	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEEMRWEDCSAAIPRGPK
Ga0137415_104449641	3300028536	Vadose Zone Soil	MNRAHYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSTILVRAEELRWEDCSAAIPRGPKCATLEGDRTVANVPFTYR
Ga0307469_103216081	3300031720	Hardwood Forest Soil	MNRAHGAVAAGALLLTLPASRRQEPTNPAAAVVKSPILVRAEELRWEACSAAIPRGPKCATLE
Ga0307469_108519622	3300031720	Hardwood Forest Soil	MNRAQYGAVAAGALLLTLPGSLRQEPTNPAAAVAKSPILVRAEELRWEACTPAIPRGPQCATLEGDRTVANVPFTYRLKIPDGY
Ga0307471_1003588081	3300032180	Hardwood Forest Soil	MNSIHYGALAAGALLLTLPGSHRQEPTNPAVMVRAEEMKWEACTAALPRGPKCATLEGDR
Ga0307472_1014945762	3300032205	Hardwood Forest Soil	MNRARYGAVAAGTLLLTLPAPLRQEPTNPAAAVAKSPILLRAEELRWEACSAAIPRGPKCATLEGDRTVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077072

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences