Metagenome Family F077080

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077080
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	102 residues
Representative Sequence	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDSAA
Number of Associated Samples	98
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.62 %
% of genes near scaffold ends (potentially truncated)	31.62 %
% of genes from short scaffolds (< 2000 bps)	73.50 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (34.188 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.42% β-sheet: 0.00% Coil/Unstructured: 33.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.0: automated matches	d6kp3a_	6kp3	0.77127
a.118.8.1: Tetratricopeptide repeat (TPR)	d1zu2a1	1zu2	0.73921
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.72729
a.118.8.0: automated matches	d5mjza_	5mjz	0.71898
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.69771

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01039	Carboxyl_trans	23.93
PF12262	Lipase_bact_N	7.69
PF13371	TPR_9	5.13
PF13847	Methyltransf_31	3.42
PF13489	Methyltransf_23	2.56
PF00821	PEPCK_GTP	2.56
PF08843	AbiEii	1.71
PF12697	Abhydrolase_6	1.71
PF13191	AAA_16	0.85
PF02535	Zip	0.85
PF12695	Abhydrolase_5	0.85
PF12867	DinB_2	0.85
PF01476	LysM	0.85
PF00528	BPD_transp_1	0.85
PF00300	His_Phos_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	23.93
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	23.93
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	23.93
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	2.56
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	1.71
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	49.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.66 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	49.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	49.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.71 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	48.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	48.72 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	48.72 %
Rugamonas rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas rubra	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101768522	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300002560\|JGI25383J37093_10033228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1718	Open in IMG/M
3300003987\|Ga0055471_10142782	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300003993\|Ga0055468_10018915	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300003996\|Ga0055467_10034325	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300004013\|Ga0055465_10158401	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005167\|Ga0066672_10263178	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300005171\|Ga0066677_10181701	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005171\|Ga0066677_10566209	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300005171\|Ga0066677_10582936	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005172\|Ga0066683_10041193	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300005172\|Ga0066683_10468084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300005172\|Ga0066683_10572036	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300005175\|Ga0066673_10015446	All Organisms → cellular organisms → Bacteria	3398	Open in IMG/M
3300005175\|Ga0066673_10341831	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005176\|Ga0066679_10133663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1540	Open in IMG/M
3300005178\|Ga0066688_10457986	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300005179\|Ga0066684_10039330	All Organisms → cellular organisms → Bacteria → Proteobacteria	2642	Open in IMG/M
3300005181\|Ga0066678_10573286	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300005187\|Ga0066675_10117937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779	Open in IMG/M
3300005445\|Ga0070708_100145308	All Organisms → cellular organisms → Bacteria → Proteobacteria	2202	Open in IMG/M
3300005446\|Ga0066686_10057448	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300005447\|Ga0066689_10054055	All Organisms → cellular organisms → Bacteria → Proteobacteria	2165	Open in IMG/M
3300005518\|Ga0070699_101065394	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005540\|Ga0066697_10033600	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300005554\|Ga0066661_10030796	All Organisms → cellular organisms → Bacteria → Proteobacteria	2959	Open in IMG/M
3300005557\|Ga0066704_10139180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300005557\|Ga0066704_10380325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	942	Open in IMG/M
3300005560\|Ga0066670_10031886	All Organisms → cellular organisms → Bacteria → Proteobacteria	2585	Open in IMG/M
3300005566\|Ga0066693_10205642	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300005568\|Ga0066703_10209932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300005764\|Ga0066903_102290537	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006031\|Ga0066651_10054284	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300006031\|Ga0066651_10499338	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300006049\|Ga0075417_10249273	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300006049\|Ga0075417_10284058	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006797\|Ga0066659_10000180	All Organisms → cellular organisms → Bacteria	19768	Open in IMG/M
3300006800\|Ga0066660_10091152	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300006846\|Ga0075430_100075226	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300006846\|Ga0075430_100240904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1499	Open in IMG/M
3300006853\|Ga0075420_100342814	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300006880\|Ga0075429_101195932	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300006969\|Ga0075419_11260357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas rubra	547	Open in IMG/M
3300007004\|Ga0079218_10376653	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300007258\|Ga0099793_10183352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1000	Open in IMG/M
3300007265\|Ga0099794_10117162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1338	Open in IMG/M
3300009012\|Ga0066710_100279742	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300009012\|Ga0066710_101836481	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009137\|Ga0066709_100786336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1377	Open in IMG/M
3300009147\|Ga0114129_12368974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300010047\|Ga0126382_11507232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	619	Open in IMG/M
3300010303\|Ga0134082_10312407	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012203\|Ga0137399_10247202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1462	Open in IMG/M
3300012205\|Ga0137362_10150934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1986	Open in IMG/M
3300012206\|Ga0137380_10003281	All Organisms → cellular organisms → Bacteria	14044	Open in IMG/M
3300012208\|Ga0137376_10089932	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2588	Open in IMG/M
3300012209\|Ga0137379_10420370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1246	Open in IMG/M
3300012361\|Ga0137360_11563210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300012582\|Ga0137358_10014105	All Organisms → cellular organisms → Bacteria	5040	Open in IMG/M
3300012582\|Ga0137358_10328630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1036	Open in IMG/M
3300012582\|Ga0137358_10497539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300012685\|Ga0137397_10110097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2025	Open in IMG/M
3300012917\|Ga0137395_10730592	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300012918\|Ga0137396_10292919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1203	Open in IMG/M
3300012922\|Ga0137394_10082846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2686	Open in IMG/M
3300012922\|Ga0137394_10339201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1283	Open in IMG/M
3300012923\|Ga0137359_10313577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1396	Open in IMG/M
3300012927\|Ga0137416_10748565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300012927\|Ga0137416_11155204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300012927\|Ga0137416_11416326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	630	Open in IMG/M
3300012929\|Ga0137404_10283993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1431	Open in IMG/M
3300012977\|Ga0134087_10072225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1401	Open in IMG/M
3300014166\|Ga0134079_10372922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300014268\|Ga0075309_1016750	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300015245\|Ga0137409_11169931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300017657\|Ga0134074_1141733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300017659\|Ga0134083_10046896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1618	Open in IMG/M
3300018433\|Ga0066667_10051954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2480	Open in IMG/M
3300018482\|Ga0066669_11344414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300020170\|Ga0179594_10048090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1431	Open in IMG/M
3300025791\|Ga0210115_1071512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	721	Open in IMG/M
3300025792\|Ga0210143_1015160	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300025910\|Ga0207684_10627633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	916	Open in IMG/M
3300025922\|Ga0207646_10525741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1065	Open in IMG/M
3300026295\|Ga0209234_1086585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1187	Open in IMG/M
3300026298\|Ga0209236_1009018	All Organisms → cellular organisms → Bacteria → Proteobacteria	5920	Open in IMG/M
3300026306\|Ga0209468_1002530	All Organisms → cellular organisms → Bacteria → Proteobacteria	7572	Open in IMG/M
3300026309\|Ga0209055_1056916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1667	Open in IMG/M
3300026315\|Ga0209686_1061846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1346	Open in IMG/M
3300026316\|Ga0209155_1002220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9004	Open in IMG/M
3300026317\|Ga0209154_1194650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300026318\|Ga0209471_1006733	All Organisms → cellular organisms → Bacteria	6186	Open in IMG/M
3300026318\|Ga0209471_1135676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300026330\|Ga0209473_1062122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1603	Open in IMG/M
3300026331\|Ga0209267_1128947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1060	Open in IMG/M
3300026333\|Ga0209158_1351383	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300026334\|Ga0209377_1048054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1922	Open in IMG/M
3300026529\|Ga0209806_1012909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4448	Open in IMG/M
3300026532\|Ga0209160_1001249	All Organisms → cellular organisms → Bacteria	21298	Open in IMG/M
3300026538\|Ga0209056_10266535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1207	Open in IMG/M
3300026540\|Ga0209376_1000817	All Organisms → cellular organisms → Bacteria	33273	Open in IMG/M
3300026547\|Ga0209156_10416424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300026552\|Ga0209577_10022255	All Organisms → cellular organisms → Bacteria	5594	Open in IMG/M
3300026557\|Ga0179587_10362680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300026557\|Ga0179587_10709037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300027643\|Ga0209076_1206214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300027671\|Ga0209588_1067857	All Organisms → cellular organisms → Bacteria → Proteobacteria	1152	Open in IMG/M
3300027748\|Ga0209689_1031691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3138	Open in IMG/M
3300027873\|Ga0209814_10122149	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300027873\|Ga0209814_10211951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300027909\|Ga0209382_10005345	All Organisms → cellular organisms → Bacteria	16758	Open in IMG/M
3300028536\|Ga0137415_10067592	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300028536\|Ga0137415_10998092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300031903\|Ga0307407_10852247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300032002\|Ga0307416_101485480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300032180\|Ga0307471_100560008	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1298	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.76%
Plants	Host-Associated → Plants	11.11%
Aquatic	Environmental → Aquatic	5.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Marine	Environmental → Aquatic → Marine	5.13%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.11%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	34.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017685222	3300000364	Soil	MSSVCWLEDRDDRLARARALAPTDPDGALALVESVLAEVPEDPEALRAKGAVLVDVADSERDRTRAVALYAEAIALLERGGCPVDSDLAAAQRGHAAALRQRNPAA*
JGI25383J37093_100332282	3300002560	Grasslands Soil	VCWLEDRDNRLARARALAPTNPAGALALIDSVLAEVPDDPVALRTKGAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAAPRERDSAA*
Ga0055471_101427821	3300003987	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGCEATSG
Ga0055468_100189152	3300003993	Natural And Restored Wetlands	DDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGCEATSGARRTG*
Ga0055467_100343252	3300003996	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGCEATSGARRTG*
Ga0055465_101584012	3300004013	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGREATSGARRTG*
Ga0066672_102631782	3300005167	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQQDSAA*
Ga0066677_101817013	3300005171	Soil	MSSVCWLQDRDDRLARARALAASDPAAALTLVESVLAEVPDDPEGLRTKGAVLVDVADAEGDPARALTLYDEALTLLRRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0066677_105662092	3300005171	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA*
Ga0066677_105829361	3300005171	Soil	MSSVCWLEDRDDRLARARALAASDPVAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERDPERALQLYDEAIVLLARGGCPADPDLAA
Ga0066683_100411934	3300005172	Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLAAAQRGR
Ga0066683_104680841	3300005172	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQ
Ga0066683_105720362	3300005172	Soil	MSSVCWLEDRDDRLARARALAPTDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERNPARALRFYDEAIALLERGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0066673_100154463	3300005175	Soil	MSSVCWLEDRDDRLARARALAASDPAAALVLIESVLAEVPDDPEGLRTKGAVLVDVADAERDPARALPLYDEALTLLRRGGCPADPDLAAAQRGREATLRQRDSAA*
Ga0066673_103418311	3300005175	Soil	MSSVCWLEDRDDRLARARALAANDPAAALALVDSVLAEVPDDPEALRTRGAVLIDVADGERDPERALRRYDEAIALLDRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0066679_101336632	3300005176	Soil	LAGSDPVAALALVESVLAEVPDDPEAQRTKGAVLVDVADAERDPVRALTLYDEALTLLRRGGCPADPDLAAAQRGRETALRQRDSAA*
Ga0066688_104579862	3300005178	Soil	MSSVCWLEDRDDRLARARALAGSVSVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA*
Ga0066684_100393302	3300005179	Soil	MSSVCWLEDRDDRLARARALAGSDSVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA*
Ga0066678_105732862	3300005181	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA*
Ga0066675_101179372	3300005187	Soil	MSSVCWLEDRDDRLARARALAASDPVAALALVDSVLAEVPDDPEALRMRGAVLVDVADAERDPARALRLYDEAIALLDRGGCPADPDLAVAQRGREAALRQRDSAA*
Ga0070708_1001453083	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVCWLEDRDDRLARARMLAASDPAAALAMVASVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLGAAQRGREAAMRQRDSVG*
Ga0066686_100574482	3300005446	Soil	ALAPTDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERNPARALRFYDEAIALLERGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0066689_100540552	3300005447	Soil	ALAPTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAEGDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAAPRERDSAA*
Ga0070699_1010653942	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSNVCWLEDRDDRLARARTLAPTDPLGALALVESVLAVVPDDPEALRAKGAVLVDVADAERDPTRAVALYAQAIALLERGGCPADPDLVAAQRGHAAALRQRDFVA*
Ga0066697_100336002	3300005540	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDVAAAQRGRAAALRQRDSAA*
Ga0066661_100307963	3300005554	Soil	MSSVCWLEDRDHRLAGARALAPPDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQQDSAA*
Ga0066704_101391802	3300005557	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQDSAA*
Ga0066704_103803252	3300005557	Soil	VCWLEDRDNRLARARALAPTNPAGALALIDSVLAEVPDDPVALRTKGAVLVDVADAERDPERALALYDEAVALLGQGGCPADPDLAAAQRGRAAALRERESVA*
Ga0066670_100318863	3300005560	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALTLLRRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0066699_111326472	3300005561	Soil	MSSVCWLEDRDDRLARARALAATDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERDPERALQLYDEAIVLLARGGCPAD
Ga0066693_102056421	3300005566	Soil	VCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA*
Ga0066703_102099322	3300005568	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQRDSTA*
Ga0066903_1022905372	3300005764	Tropical Forest Soil	MSSVCWLEDRDDRLARARALAPIDPRGALALVESVLAEVPDDLDALRTKGAVLIDVADAERDPGRAVTLYDAAIALLGRGGGPAGVDLAAAQRGRAAALRERDSTAQNFSI*
Ga0066651_100542843	3300006031	Soil	MSSVCWLEDRDDRLARARALAGSDPVGALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA*
Ga0066651_104993382	3300006031	Soil	MSSVCWLEDRDDRLARARALAASDPAAALALIESVLAEVADDPEGLRTKGAVLVDVADAERDPARALPLYDEALTLLRRGGCPADPDLAAAQRGREATLRQRDSAA*
Ga0075417_102492732	3300006049	Populus Rhizosphere	MSSVCWLEDRDDRLARARTLAPTDPDGALALVQSVLAEVPDDPEARRTKGAVLVDVADAERDPTRAVAFYAEAIALLERGGCPADPDLAAAQRGHAAALRQRDSAA*
Ga0075417_102840581	3300006049	Populus Rhizosphere	MSSVCWLEDRDDRLARARALAPSDPQGALALVESVLAEVPDDPEALRTKGGVLIDVADAERDPGRALPIYDEAIALLSRGGCPADADLAAAQRGREAALRQRDSAA*
Ga0066659_100001806	3300006797	Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPARALARYDEAIALLHVVAVPPIPTSPRRSAAALRERDSAA*
Ga0066660_100911522	3300006800	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDSTA*
Ga0075430_1000752263	3300006846	Populus Rhizosphere	MSRVCWLEDRDDRLARARALAPSDPQGALALVESVLAEVPDDPEALRTKGGVLIDVADAERDPGRALPIYDEAIALLSRGGCPADADLAAAQRGREAALRQRDSAA*
Ga0075430_1002409042	3300006846	Populus Rhizosphere	MSSVCWLEDRDDRLARARALAPSDPRGALALVESVLAEVPDDSDALRAKGAVLVDVADAEPDPSRAADLYAEAIALLERGGGRADPDLAA*
Ga0075420_1003428141	3300006853	Populus Rhizosphere	MSSVCWLEDRDDRLARARALAANDPAAALTLVESVLAEVPDEPEALRTKGAVLVDVADAERDPTRAVALYEEAMRLLGRGGCPADPD
Ga0075429_1011959322	3300006880	Populus Rhizosphere	FSMSSVCWLEDRDDRLARARTLAPTDPDGALALVQSVLAEVPDDPEARRTKGAVLVDVADAERDPTRAVAFYAEAIALLERGGCPADPDLAAAQRGHAAALRQRDSAA*
Ga0075419_112603571	3300006969	Populus Rhizosphere	MSSVCWLEDRDDRLARARALAANDPAAALTLVESVLAEVPDEPEALRTKGAVLVDVADAERDPTRAVALYEEAMRLLGRGGCPADP
Ga0079218_103766532	3300007004	Agricultural Soil	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVLYEQAQALLEAHGGERRDLEAARRGREATSGARRTG*
Ga0099793_101833522	3300007258	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDLARALTLYDEALTLLPRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0099794_101171623	3300007265	Vadose Zone Soil	MASVCWLEDRDDRLARARALGETDPAAALALVDWVLAEVPDDPVALSAKGAMLVDVADAEGDPTRASTLYEQAIALLEWDPADPDLAAQRGRAAALRPRDSAA*
Ga0066710_1002797422	3300009012	Grasslands Soil	AASDPAAALALVESVLAEVPDDPEAQRTKGAVLVDVADAERDPARALTLYDEALTLLRHGGCPADPDLAAAQRGRAAALRQRDSAA
Ga0066710_1018364812	3300009012	Grasslands Soil	MSSVCWLEDRDDRLARARALAPTDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERNPARALRFYDEAIALLERGGCPADPDLAAAQRGREAALRQRDSAA
Ga0066709_1007863362	3300009137	Grasslands Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESGLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQQDSAA*
Ga0114129_123689742	3300009147	Populus Rhizosphere	MSSVCWLEDRDARLAQARTLAPTDPLGALALVESVLAEVPDDPEALRAKGAVLVDVADAERDPERALTLYEEAIMLLGRAGGPAD
Ga0126382_115072321	3300010047	Tropical Forest Soil	MSSVCWLEDRDDRLARARALAPIDPRGALALVESVLAEVPDDLDALRTKGAVLIDVADAERDPGRAVTLYDAAIALLGRGGGPAGVDLA
Ga0134082_103124072	3300010303	Grasslands Soil	MSSVCWLEDRDDRLTRARALAPTDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERDPARALRLYDEAIALLDRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0137399_102472021	3300012203	Vadose Zone Soil	MSSVCWLEDRDDRLARARALAASDPATALALIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRE
Ga0137362_101509343	3300012205	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQGGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0137380_100032812	3300012206	Vadose Zone Soil	VSSVCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPERALTLYDEAVALLGQGGCPAAPDFAAAQRGRETALRQRDRVA*
Ga0137376_100899323	3300012208	Vadose Zone Soil	LAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA*
Ga0137379_104203702	3300012209	Vadose Zone Soil	VSSVCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRDAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAALRERDSAA*
Ga0137360_115632101	3300012361	Vadose Zone Soil	VSSVCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDEPVALRTRGAVLVDVADAEGDPARALARYDEAIALLQRGGCPADPDLA
Ga0137358_100141053	3300012582	Vadose Zone Soil	MSSVCWLEDRDDRLTRARALAGSDPAAALALVESVLAEVPDDPEAQRAKGAVLVDVADAERDPVRALTLYDEALTLLQRGGCPADPETA*
Ga0137358_103286302	3300012582	Vadose Zone Soil	VCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDLARALTLYDEALTLLPRGGCPADPDLAAAQRGREAALRQRDSAA*
Ga0137358_104975391	3300012582	Vadose Zone Soil	MSSVCWLEDRDDRLTRARTLAGSDPVAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPVRALTLYDEALTLLRRGGCPADADLAAAQRGREAALRQRDSAA*
Ga0137397_101100972	3300012685	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQGGGCPADPDLAAAQRGREAALRHETPPPRSSVPRAAGR*
Ga0137395_107305922	3300012917	Vadose Zone Soil	MSSVCWLEDRDDRLTRARALAGSDPAAALALVESVLAEVPDDPEAQRAKGAVLVDVADAERDPVRALTLYDEALTLLRRGGCPADADLAAAQRGREAALRQRDDVSERSAPGSPGRAPNVGGCGVPAFRT*
Ga0137396_102929191	3300012918	Vadose Zone Soil	MSSVCWLEDRDDRLARARALAESDPVGALALVDSVLAEVPDDPEALRIKGAVLVDVADAERDPERALALYEDAVALLGQGACPAGPDLAAARRGREAALRQRDSAA*
Ga0137394_100828463	3300012922	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDSAA*
Ga0137394_103392011	3300012922	Vadose Zone Soil	MSSVCWLEDRDDRLTRARALAASDPATALALIESVFAEVPDDPEALRTRGAVLVDVADAERDPARALTLYDEALTLLQRGGCPADPDLAAAQRGRAAALRQRDRVA*
Ga0137359_103135772	3300012923	Vadose Zone Soil	MSSVCWLEDRDDRLARARALAASDPAAALALIESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEAFTLLRRGGCPADADLAAAQRGREAALRQRDT*
Ga0137416_107485651	3300012927	Vadose Zone Soil	MSSVCWLEDRDDRLTRARALAGSDPAAALALVESVLAEVPDDPEAQRAKGAVLVDVADAERDPVRALTLYDEALTLMQRGGCPADPDLTAAQRGRAAALRQRGRVA*
Ga0137416_111552042	3300012927	Vadose Zone Soil	WLEDRDDRLARARALAASDPATALALIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDSPA*
Ga0137416_114163262	3300012927	Vadose Zone Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDS
Ga0137404_102839932	3300012929	Vadose Zone Soil	MSSVCWLEDRDDRLTRARTLAGSDPVAALALVESVLAEVPDDPDALRTKGAVLVDVADAERDPARALTLYDEALTLLRRGGCPADADLAAAQRGREAALRQRDSAA*
Ga0134087_100722251	3300012977	Grasslands Soil	MSSVCWLEDRDDRLARARALAASDPVAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERNPACALRFYDEAIALLERGGCPADPDLAAAQRGREAAL
Ga0134079_103729222	3300014166	Grasslands Soil	MSSVCWLEDRDDRLARARALAASDPAAALALVESVLAEVPDDPEAQRTKGAVLVDVADAERDPARALTLYDEALTLLRRGGCPADPDLA
Ga0075309_10167502	3300014268	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADREHDPARARVVYEQAQALLEAHGGERRDLEAARRGCEATSGARRTG*
Ga0137409_111699312	3300015245	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALAVVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQGGGCPADPDLAAAQRGREAALRHETPPPRSSVPRAAGR*
Ga0134074_11417332	3300017657	Grasslands Soil	MSSVCWLEDRDDRLARARALAPTDPAAALALVDSVLAEVPDDPEALRTRGAVLVDVADAERDPARALRLYDEAIALLDRGGCPADPDLSAAQRGREAALRQRDSAA
Ga0134083_100468963	3300017659	Grasslands Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLA
Ga0066667_100519542	3300018433	Grasslands Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA
Ga0066669_113444142	3300018482	Grasslands Soil	MSSVCWLEDRDDRLARARALAASDPAAALVLIESVLAEVPDDPEGLRTKGAVLVDVADAERDPARALPLYDEALTLLRRGGCPADPDLAAAQRG
Ga0179594_100480902	3300020170	Vadose Zone Soil	MSSVCWLEDRDDRLTRARTLAGSDPVAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPVRALTLYDEALTLLRRGGCPADADLAAAQRGREAALRQRDSAA
Ga0210115_10715122	3300025791	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGREATSGARRTG
Ga0210143_10151602	3300025792	Natural And Restored Wetlands	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQAQALLEAHGGERRDLEAARRGCEATSGARRTG
Ga0207684_106276331	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LEDRDDRLARARTLAPTDPLGALALVESVLAVVPDDPEALRAKGAVLVDVADAERDPTRAVALYAQAIALLERGGCPADPDLVGAQRGHAAALRQRDFVA
Ga0207646_105257411	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ISGPPEGVMSNVCWLEDRDDRLARARTLAPTDPLGALALVESVLAVVPDDPEALRAKGAVLVDVADAERDPTRAVALYAQAIALLERGGCPADPDLAGAQRGHAAALRQRDFAA
Ga0209234_10865852	3300026295	Grasslands Soil	HRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQQDSAA
Ga0209236_10090186	3300026298	Grasslands Soil	VCWLEDRDNRLARARALAPTNPAGALALIDSVLAEVPDDPVALRTKGAVLVDVADAERDPERALALYDEAVALLGQGGCPADPDLAAAQRGRAAALRERESVA
Ga0209468_10025302	3300026306	Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRDAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAALRERDSAA
Ga0209055_10569162	3300026309	Soil	MSSVCWLEDRDHRLAGARALAPPDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQQDSAA
Ga0209686_10618462	3300026315	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA
Ga0209155_10022203	3300026316	Soil	MSSVCWLEDRDDRLARARALAASDPAAALVLIESVLAEVPDDPEGLRTKGAVLVDVADAERDPARALPLYDEALTLLRRGGCPADPDLAAAQRGREATLRQRDSAA
Ga0209154_11946502	3300026317	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGGETALREQDSAA
Ga0209471_10067333	3300026318	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQQDSAA
Ga0209471_11356762	3300026318	Soil	MSSVCWLEDRDDRLARARALAGSDPVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLRRGECPADADLAAAQRGREAALRQRDSAA
Ga0209473_10621222	3300026330	Soil	MSSVCWLEDRDDRLARARALAGSDSVAALALVESVLTEVPDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA
Ga0209267_11289471	3300026331	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPAD
Ga0209158_13513831	3300026333	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQPGGCPADPDLAAAQRGRETALRQRDSTA
Ga0209377_10480542	3300026334	Soil	ARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAEGDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAALRERDSAA
Ga0209806_10129092	3300026529	Soil	MSSVCWLEDRDHRLAEARALAPSDPAGALTLIESVLAEVRDDPEALRTKGAVLVDVADAERDPARALTLYDDAICLLQRGGCPADPDLTAAQRGRAAALRQRDSAA
Ga0209160_10012491	3300026532	Soil	MSSVCWLEDRDNRLARARALAPTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAEGDPARALARYDEAIALLQRGGCPADPDLAAAQRGREAA
Ga0209056_102665352	3300026538	Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPERALTLYDEAVALLGQGGCPAAPDFAAAQRGRETALRQRDRVA
Ga0209376_100081735	3300026540	Soil	VCWLEDRDNRLARARALATTDPAGALALVDSVLAEVPDDPVALRTRGAVLVDVADAERDPARALARYDEAIALLQRGGCPADPDLAAARSGSAGQPPR
Ga0209156_104164242	3300026547	Soil	MSSVCWLEDRDDRLARARALAASDPVAALALVDSVLAEVPDDPEALRMRGAVLVDVADAERDPARALRLYDEAIALLDRGGCPADPDLAVAQRGREAALRQRDSAA
Ga0209577_100222552	3300026552	Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQQDSAA
Ga0179587_103626802	3300026557	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDLARALTLYDEALTLLPRGGCPADPDLAAAQRGREAALRQRDSAA
Ga0179587_107090371	3300026557	Vadose Zone Soil	LEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRKKGAVLVDDADADGDPAWALVLYDEALALLPRGGCPADPDLAAAQRGREAALRQRDSAA
Ga0209076_12062142	3300027643	Vadose Zone Soil	MSSVCWLEDRDDRLARARTLAGSDPAAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETALRQRDSPA
Ga0209588_10678572	3300027671	Vadose Zone Soil	MASVCWLEDRDDRLARARALGETDPAAALALVDWVLAEVPDDPVALSAKGAMLVDVADAEGDPTRASTLYEQAIALLEWDPADPDLAAQRGRAAALRPRDSAA
Ga0209689_10316912	3300027748	Soil	MSSVCWLEDRDDRLTRARTLAGSDPVAALALVESVLAEVPDDPEALRTKGAVLVDVADAERDPVRALTLYDDAICLLQRGGCPADPDLAAAQRGRAAALRQRDSAA
Ga0209814_101221492	3300027873	Populus Rhizosphere	MSSVCWLEDRDDRLARARTLAPTDPDGALALVQSVLAEVPDDPEARRTKGAVLVDVADAERDPTRAVAFYAEAIALLERGGCPADPDLAAAQRGHAAALRQRDSAA
Ga0209814_102119512	3300027873	Populus Rhizosphere	MSSVCWLEDRDDRLARARALAPSDPQGALALVESVLAEVPDDPEALRTKGGVLIDVADAERDPGRALPIYDEAIALLSRGGCPADADLAAAQRGREAALRQRDSAA
Ga0209382_1000534518	3300027909	Populus Rhizosphere	RDDRLARARALAPSDPQGALALVESVLAEVPDDPEALRTKGGVLIDVADAERDPGRALPIYDEAIALLSRGGCPADADLAAAQRGREAALRQRDSAA
Ga0137415_100675922	3300028536	Vadose Zone Soil	VSSVCWLADRDDRLARARALAASDPAAALALIESVLAEVPDDPEGLRTKGAVLVDVADAERDPARALTLYDEALTLLRRGGCPADPDLAAAQRGREAALRQRDSAA
Ga0137415_109980922	3300028536	Vadose Zone Soil	MSSVCWLEDRDHRLAGARALAPSDPAGALTLIESVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLAAAQRGRETAL
Ga0307407_108522472	3300031903	Rhizosphere	MASVCWLEDRDDRLRRARALAESDPAAALALVEQVLAEVPSDREALCAKGAVLVDVADRERDPARARVVYEQALALLEAHGGERRDLEAARRGRQATSAARRTG
Ga0307416_1014854802	3300032002	Rhizosphere	VSSVCWLEDRDDRLARARALAPADPAAALALVESVLAEVPDDLEALRTKGAVLVDVADAERDPGRARVIYEDAIALLEKGRCPADADLAAAHRGREATLRERGSVA
Ga0307471_1005600083	3300032180	Hardwood Forest Soil	MSRVCWLEDRDDRLARARMLAASDPAAALAMVASVLAEVPDDPEALRTKGAVLVDVADAERDPARALTLYDEALALLQRGGCPADPDLGAAQRGREAALRQRDSVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077080

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences