Metagenome / Metatranscriptome Family F077135

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077135
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	136 residues
Representative Sequence	VPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPSAGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDNRVSRNGPRVVAQ
Number of Associated Samples	78
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.02 %
% of genes near scaffold ends (potentially truncated)	70.94 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (41.026 % of family members)
Environment Ontology (ENVO)	Unclassified (65.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.70% β-sheet: 43.03% Coil/Unstructured: 47.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.1.15.0: Integrin domains	d5ffga2	5ffg	0.65
b.1.18.3: E set domains	d1hc1a3	1hc1	0.62
b.1.18.3: E set domains	d1llaa3	1lla	0.62
b.2.3.3: Bacterial adhesins	d4z3ga1	4z3g	0.62
b.1.15.0: Integrin domains	d4g1ma3	4g1m	0.61

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13229	Beta_helix	7.69
PF02412	TSP_3	2.56
PF13458	Peripla_BP_6	1.71
PF00196	GerE	0.85
PF01979	Amidohydro_1	0.85
PF13473	Cupredoxin_1	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.58 %
Unclassified	root	N/A	2.56 %
Viruses	superkingdom	All Organisms → Viruses	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.58 %
Unclassified	root	N/A	2.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.26 %
Unclassified	root	N/A	2.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	63.25 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.26 %
Unclassified	root	N/A	2.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	63.25 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	10.26 %
Unclassified	root	N/A	2.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.26 %
Unclassified	root	N/A	2.56 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.26 %
Unclassified	root	N/A	2.56 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.85 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.26 %
Unclassified	root	N/A	2.56 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.85 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.26 %
Unclassified	root	N/A	2.56 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.85 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.26 %
Unclassified	root	N/A	2.56 %
Cellulomonas sp. FA1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. FA1	0.85 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10148181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1195	Open in IMG/M
3300005166\|Ga0066674_10256742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	828	Open in IMG/M
3300005171\|Ga0066677_10180498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1172	Open in IMG/M
3300005172\|Ga0066683_10140855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1478	Open in IMG/M
3300005172\|Ga0066683_10401853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	846	Open in IMG/M
3300005172\|Ga0066683_10803795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300005178\|Ga0066688_10434113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	850	Open in IMG/M
3300005186\|Ga0066676_10462483	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005446\|Ga0066686_10154838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1517	Open in IMG/M
3300005446\|Ga0066686_10896198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300005451\|Ga0066681_10656398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300005467\|Ga0070706_100322843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1440	Open in IMG/M
3300005468\|Ga0070707_101730549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300005540\|Ga0066697_10222211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1122	Open in IMG/M
3300005552\|Ga0066701_10098480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1704	Open in IMG/M
3300005552\|Ga0066701_10155060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1381	Open in IMG/M
3300005553\|Ga0066695_10226065	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005553\|Ga0066695_10227710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1174	Open in IMG/M
3300005555\|Ga0066692_10171597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1343	Open in IMG/M
3300005557\|Ga0066704_10704310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300005559\|Ga0066700_10005990	All Organisms → cellular organisms → Bacteria	5948	Open in IMG/M
3300005559\|Ga0066700_10013841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4305	Open in IMG/M
3300005559\|Ga0066700_10199713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1381	Open in IMG/M
3300005598\|Ga0066706_10402435	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300005598\|Ga0066706_11103468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. FA1	606	Open in IMG/M
3300006034\|Ga0066656_10276016	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006034\|Ga0066656_10549894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	750	Open in IMG/M
3300006791\|Ga0066653_10304162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300006794\|Ga0066658_10412752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	733	Open in IMG/M
3300006794\|Ga0066658_10474735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300006796\|Ga0066665_10322358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1250	Open in IMG/M
3300006797\|Ga0066659_11666820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300006845\|Ga0075421_102499279	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006852\|Ga0075433_11634195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	555	Open in IMG/M
3300006871\|Ga0075434_100957270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	870	Open in IMG/M
3300006904\|Ga0075424_100202972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2106	Open in IMG/M
3300009012\|Ga0066710_100884763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1374	Open in IMG/M
3300009012\|Ga0066710_104162685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300009012\|Ga0066710_104362334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300009012\|Ga0066710_104453140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300009137\|Ga0066709_100111471	All Organisms → cellular organisms → Bacteria	3388	Open in IMG/M
3300009137\|Ga0066709_100681904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1475	Open in IMG/M
3300009137\|Ga0066709_101556965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300009137\|Ga0066709_101839270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	847	Open in IMG/M
3300009137\|Ga0066709_102426698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300009137\|Ga0066709_103059630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300009137\|Ga0066709_103126322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	605	Open in IMG/M
3300009137\|Ga0066709_104181537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300009147\|Ga0114129_10544666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1510	Open in IMG/M
3300009147\|Ga0114129_12068636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300009147\|Ga0114129_12633761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300009162\|Ga0075423_10442381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1365	Open in IMG/M
3300009818\|Ga0105072_1039459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	886	Open in IMG/M
3300009837\|Ga0105058_1046698	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300010301\|Ga0134070_10450435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300010323\|Ga0134086_10207193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300010323\|Ga0134086_10490521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300010333\|Ga0134080_10339195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	682	Open in IMG/M
3300010337\|Ga0134062_10313595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300012201\|Ga0137365_10125390	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300012204\|Ga0137374_10821583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300012207\|Ga0137381_10721057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	866	Open in IMG/M
3300012208\|Ga0137376_10153764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1980	Open in IMG/M
3300012209\|Ga0137379_10243526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1712	Open in IMG/M
3300012209\|Ga0137379_11734233	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012353\|Ga0137367_10307245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300012353\|Ga0137367_10452214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	907	Open in IMG/M
3300012355\|Ga0137369_10628929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	744	Open in IMG/M
3300012360\|Ga0137375_10386379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1228	Open in IMG/M
3300012532\|Ga0137373_10649526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300012972\|Ga0134077_10278056	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300012976\|Ga0134076_10445787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300014150\|Ga0134081_10327403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300015358\|Ga0134089_10341070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300017654\|Ga0134069_1044480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1387	Open in IMG/M
3300017654\|Ga0134069_1219022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300017654\|Ga0134069_1219236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300017656\|Ga0134112_10123817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	983	Open in IMG/M
3300017657\|Ga0134074_1315479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300018028\|Ga0184608_10281005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	732	Open in IMG/M
3300018072\|Ga0184635_10183765	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300018072\|Ga0184635_10225014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300018081\|Ga0184625_10100436	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300018081\|Ga0184625_10247911	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300018081\|Ga0184625_10413477	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300018431\|Ga0066655_10951252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300019279\|Ga0184642_1721390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300020003\|Ga0193739_1050129	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300021080\|Ga0210382_10380582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300025327\|Ga0209751_10928453	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300025910\|Ga0207684_10073284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2908	Open in IMG/M
3300026313\|Ga0209761_1079607	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300026326\|Ga0209801_1046202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1995	Open in IMG/M
3300026332\|Ga0209803_1092121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1251	Open in IMG/M
3300026332\|Ga0209803_1242801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300026334\|Ga0209377_1008511	All Organisms → cellular organisms → Bacteria	5945	Open in IMG/M
3300026334\|Ga0209377_1035794	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300026524\|Ga0209690_1030051	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300026524\|Ga0209690_1262041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300026524\|Ga0209690_1302779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300026528\|Ga0209378_1010735	All Organisms → cellular organisms → Bacteria	5550	Open in IMG/M
3300026528\|Ga0209378_1079915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1481	Open in IMG/M
3300026528\|Ga0209378_1112292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1185	Open in IMG/M
3300026532\|Ga0209160_1013403	All Organisms → cellular organisms → Bacteria	5837	Open in IMG/M
3300026536\|Ga0209058_1202041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300026537\|Ga0209157_1325150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300026538\|Ga0209056_10030082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5135	Open in IMG/M
3300026538\|Ga0209056_10429595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300026540\|Ga0209376_1376462	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300026548\|Ga0209161_10119015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1565	Open in IMG/M
3300027748\|Ga0209689_1018909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4311	Open in IMG/M
3300027748\|Ga0209689_1326411	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300028884\|Ga0307308_10644280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300034149\|Ga0364929_0103612	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.16%
Host-Associated	Host-Associated	6.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.32%
Aquatic	Environmental → Aquatic	6.84%
Plants	Host-Associated → Plants	6.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.84%
Sediment	Environmental → Aquatic → Sediment	5.13%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.13%
Loam	Environmental → Terrestrial → Soil → Loam	5.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.71%
Sand	Environmental → Terrestrial → Soil → Sand	1.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	53.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	41.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101481813	3300002908	Grasslands Soil	VPKTVRLSPGVGSGDSANVVVANQSTHTDTIGVYVDVMAPAAGGCTPNGRLFQTLVTLNAGSKTTVSVPVSYNCFDPAAANGLSFTWIAVADHGADDLASCPPGSLQGIACFNALADDDQDPSDNRMSRSGPRVIAQ*
Ga0066674_102567422	3300005166	Soil	RLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPSAGGCTPNGRVLQTTVTLAPGAKTTISVPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0066677_101804982	3300005171	Soil	MTRISGVAKNVRLLPGEVVSDSANIVVANESAHSDTIGVYVDVIAPAAGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCADPAAANGLSFTWIAVADHGADDLASCPAGALQSVACFNALADDDQDPADNRASRNGPKVVAQ*
Ga0066683_101408553	3300005172	Soil	TPTATAAGHDDRLARISGVSRNVRLSSGGIVTDTTNIVVVNQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCADPAAANGLSYTWMAVADHDADGLAACGPATLQGVACFNALADDDEDPADNRATRNGPRIVAQ*
Ga0066683_104018531	3300005172	Soil	SIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGALQSLACFNALADDDQDAADNRVSRNGPKVVAQ
Ga0066683_108037951	3300005172	Soil	PKNVRLLPGEVLNDSGSVVVASQSTHSDTIGVYVDVMAPASGGCTPNGRVLQTTVTLAPGAKTTISVPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0066688_104341131	3300005178	Soil	VNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066676_104624831	3300005186	Soil	RISGVSRNVRLSPGGIVTDTTNIVVANQSGHTDTIGVYVDVIAPAAGGCTPNGRLLETTVTLAAGAKPTIPVPVSYSCSNPAAANGLSFTWMAAADHGADDLSSCGFGSLQGNICFNALADDDQDPADNRATRNGPRVVAQ*
Ga0066686_101548381	3300005446	Soil	TPTATATPTATAAGHDDRLARISGVSRNVRLSSGGIVTDTTNIVVVNQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCADPAAANGLSYTWMAVADHDADDLAAYGPATLQGVACFNALADDDEDPADNRATRNGPRIVAQ*
Ga0066686_108961981	3300005446	Soil	DTIGVYVDVMAPSAGGCTPNGRVLQTTVTLAAGAKTTITAPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACFNALADDDQDAADNRVSRNGPRVVAQ*
Ga0066681_106563982	3300005451	Soil	ADSGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPSGRVLQTTVTLAAGAKTTIPAPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0070706_1003228432	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQVHDARLTRISGVPKNLHLLPGEVVADTSSIVVANQSNHTDAIGVYVDLMAPVAGGCTPNGRVLQTTVTLAAGAKTTIPVPVSYSCADPAAANGMSYIWVAVADHGADDLASCAPGSLQNIACFNALADDDQDPTDNRATRNGPNVAAQ*
Ga0070707_1017305491	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ADSGSIVVANQSAHADTIGVYVDVIAPAGGGCTPNGRILETTVTLAAGAKTTLSVPLSYSCSDPAAANGLSFNWVAVADHGADDLASCGPGTLQGIACFNALANDDEDPADNRLSRNGPKVVAQ*
Ga0066697_102222111	3300005540	Soil	AGIVVANQSAHSDTIGVYVDVMAPSAGGCTPNGRVLETTVTLAAGVKTTIPVPVSYSCASPAAANGLSFIWVAVADHGADDVAFCGAGTLQGLACFNALADDDEDPADNRASRNGPRVVAQ*
Ga0066701_100984802	3300005552	Soil	VRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGSLQGISCFNALADDDQDSSDNRVSRNGPRVVAQ*
Ga0066701_101550601	3300005552	Soil	RISGVPKTVRLSPGVGSGDSANVVVANQSTHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKITISVPVSYSCSDPTAANGLSYTWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066695_102260651	3300005553	Soil	TPTPAGHDSRLTRINGIAKNIHLSPGGSVSDTASITVANQSGHTDTIGVYVDVLAPTAGGCTPSGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ*
Ga0066695_102277101	3300005553	Soil	VPKNVRLLPGEVVADSGSITVANQSTHSDTIGVYVDVMAPASGGCTPNGRVLQTTVTLAAGAKTTLSVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSVACFNALADDDQDPADNRASRN
Ga0066692_101715971	3300005555	Soil	GIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066704_107043101	3300005557	Soil	NQSTHTDTIGVYVDVMAPAAGGCTPNGRLFQTLVTLNAGSKTTISVPVSYNCFDPAAANGLSFTWIAVADHAADDLASCPPGSLQGIACFNALADDDQDPSDNRTSRSGPRVIAQ*
Ga0066700_100059907	3300005559	Soil	VPKTVRLSPGVGSGDSANVVVANQSTHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKITISVPVSYSCSDPTAANGLSYTWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066700_100138414	3300005559	Soil	MTRISGVAKNVRLLPGEVVSDSANIVVANESTHEDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIPVPVNYSCSDPAAANGLSYTLIAVADHGGDDLAACPPGALQSVACFNALADDDQDPADNRASRNGPKVVAQ*
Ga0066700_101997133	3300005559	Soil	HSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGSLQGISCFNALADDDQDSSDNRVSRNGPRVVAQ*
Ga0066706_104024351	3300005598	Soil	VRLLPDEVVADTVNISVANQSGHSDTIGVYVEVTPPSFGDCTPTGRVLTTTVTLAPGAKTTIPVLVGYSCREPAAADGVSYTWVAVADHGADDLASCPPGALQSLTCFNALADDDQDPADNRASRNGPKVVAQ*
Ga0066706_111034681	3300005598	Soil	TPTSTATPTPTPTPTPVGHDSRLSRISGVSRNVRLSPGGVVTNSAGIVVANQSAHSDTIGVYVDVMAPSAGGCTPNGRVLETTVTLAAGVKTTIPVPVSYSCASPAAANGLSFIWVAVADHGADDVAFCGAGTLQGLACFNALADDDEDPADNRASRNGPRVVAQ*
Ga0066656_102760161	3300006034	Soil	RISGVSRNVRLSPGGIVTDTTNIVVANQSGHTDTIGVYVDVIAPAAGGCTPNGRLLETTVTLAAGAKTTIPVPVSYSCSNPAAANGLSFTWMAAADHGADDLSSCGFGSLQGNICFNALADDDQDPADNRATRNGPRVVAQ*
Ga0066656_105498941	3300006034	Soil	IGVYVDVMAPAAGGCTPNGRVLQTTATLAAGAKTTIAVPVSYSCSDPAAANGLSYTWVAVADHGADDLAACGPGTLQGVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066653_103041622	3300006791	Soil	TPTPCGSCTPTATPTPNPNAAGHDARLTRIGGVPKNVRLLPGEVINDTATITFANQSTHGDSIGIYVDLIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGADDLASCRPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0066658_104127522	3300006794	Soil	SVSDTASITVANQSGHTDTIGVYVDVLAPTAGGCTPSGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ*
Ga0066658_104747351	3300006794	Soil	TVTPTPCGSCTPTATPTPNPNAAGHDARLTRIGGVPKNVRLLPGEVINDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRVLETTVTLAAGAKTTIAVPVTYSCSDPAAANGLSFTWVAVADHGADDQASCGPGTLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066665_103223582	3300006796	Soil	VPKNVRLLPSEVVADSGSIIVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAIADHGADDLASCGPGALQSLACFNALADDDQDAADNRVSRNGPRVVAQ*
Ga0066659_116668201	3300006797	Soil	SCTPTATPTPNPNAAGHDARLTRIGGVPKNVRLLPGEVINDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0075421_1024992791	3300006845	Populus Rhizosphere	PPPVAGHDARLTRISGVPRNVRLSPGEVITDTASIVVANESNHTETIAVYVDLMAPAAGGCMPFGRVLETTITLAAGGKTTLSVPVSYVCSNPAAANGLSYTWTAVADHGADDLSACGQGSLQGLGCFNALANDDADPGDNRKARTGPTVIAQ*
Ga0075433_116341951	3300006852	Populus Rhizosphere	PASEMASTIVSSGAEIYAIGSGIFGAASSLNERFTCAVPTPTPTVTPAGHDARLVRIGGVPKSVRLSPGQISTDSGSIVVENQSGHVDTIGVYVDIVAPASGGCSPSGRVLQMTVTLAANGKTNIPVPVGYSCSDPVAANGLSFTWVAAADHGGDDLASCPPGSLQGIACFNALADDDQDASDN
Ga0075434_1009572702	3300006871	Populus Rhizosphere	HLLPGEVIADSGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTISAPVSYSCADPAAANGMSYTWVAVADHGADDLASCGPGTLQSVACFNALADDDQDPADNRVTRNGPKVVAQ*
Ga0075424_1002029722	3300006904	Populus Rhizosphere	LPGEVIADSGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKTTIAVPVSYSCADPAAANGMSYTWVAVADHGGDDLAACPPGSLQGLACFNALADDDQDPADNRVTRNGPKVVAQ*
Ga0066710_1008847632	3300009012	Grasslands Soil	VPKNVRLLPGEVTNDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ
Ga0066710_1041626851	3300009012	Grasslands Soil	PTPTPGSAGHDARLTRVSGVPKNVRLLPGEVIADSGSIVVANQSTHSDTVGVYVDVMAPASGGCAPNGRVLQTTITLAAGAKTTIPVPVSYSCADPAASNGLSYTWVAVADHGADDLASCSPGALQSLACFNALADDDQDPADNRLSRNGPKVVAQ
Ga0066710_1043623341	3300009012	Grasslands Soil	DTIGVYVDVLAPSAGGCTPNGRVLQTTVTLAAGAKTTIPVPISYSCADPAAANGLSYTWVAVADHGGDDLTSCGPGALQSLACYNALADDDQDPSDNRLSRNGPKVVAQ
Ga0066710_1044531401	3300009012	Grasslands Soil	SCITPTPTTTATPTPGPSGHDARLTRISGVSKNVRLLPGEVVADSGSITIANQSTHSETIGVYVDVMAPSAGGCTPNGRAMTATVTLNAGAKTSVSVPVGYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACFNALADDDQDPSDNRLSRNGPKVVAQ
Ga0066709_1001114713	3300009137	Grasslands Soil	STCTPTPTPTPAGHDSRLSRISGLPRNVRLSAGIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0066709_1006819043	3300009137	Grasslands Soil	VPKNVRLLPGEVINDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0066709_1015569652	3300009137	Grasslands Soil	VPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVLAPASGGCTPNGRVLQTTVTLAAGAKTTIPVPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0066709_1018392702	3300009137	Grasslands Soil	VPKNVRLLPGEVIADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVLQTTITLAAGAKTTLSVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDNRVSRNGPRVVAQ*
Ga0066709_1024266981	3300009137	Grasslands Soil	CTPTPTATPTPTPNPAGHDSRLTRISGVPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRMLQTTVTLAAGAKTTIPVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDAADNRVSRNGPKVVAQ*
Ga0066709_1030596301	3300009137	Grasslands Soil	SGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPSGRVLQTTVTLAAGAKTTIPAPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGSLQSISCFNALADDDQDSSDNRVSRNGPRVVAQ*
Ga0066709_1031263222	3300009137	Grasslands Soil	GVPRNVRLSTGSVVNDSGNILVANQSSHTDAIGVYVDVMAPTAGACSPNGRVLETTVVLAAGAKTTLSVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ*
Ga0066709_1041815371	3300009137	Grasslands Soil	SPVPVAGHDARLTRISGVLKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVGVLAPSAGGCTPNGRVLQTTVTLAAGAKTTIPVPISYSCADPAAANGLSYTWVAVADHGGDDLTSCGPGALQSLACYNALADDDQDPSDNRLSRNGPKVVAQ*
Ga0114129_105446661	3300009147	Populus Rhizosphere	VRLLPGEVVSDSANIVVANESSHSGTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKATLSVPVSYSCTDPAAANGMSFTWIAVADHGADDLASCPAGSLQGLACFNALADDDQDPADNRVTRNGPKVVAQ*
Ga0114129_120686361	3300009147	Populus Rhizosphere	MPAGHDARLTRISGVPKNVRLSPGEVIADSGNIVVANQSAHTDTIGVYADVIEPAVGGCTPNGRVLQTTVTLNAGAKTTLSVPVSYSCSDPATGNGLSFTWVAVADHGADDAASCGPRTLSSMACFNALADDDEDPADNRATRNGPKVIAQ*
Ga0114129_126337611	3300009147	Populus Rhizosphere	IVVANQSAHADTIGVYVDVIAPATGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCSDPAAANGLSFTWVAVADHGADDLASCGPGTLQGITCFNALASDDEDPADNRLSRNGPKVVAQ*
Ga0075423_104423812	3300009162	Populus Rhizosphere	LPGEVIADSGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTISAPVSYSCADPAAANGISYSWVAVADHGADDLASCGPGTLQSVACFNALADDDQDPADNRVTRNGPKVVAQ*
Ga0105072_10394591	3300009818	Groundwater Sand	AAGHDARLTRIGGVAKNLRLSPGEVITDNASIVVANDGNHTETIGVYVDVMAPATGGCTPNGRVLQTTVTLGAGNKTTIPVPVSYSCLDPSAADGMSYTWIAVADHGADDLASCGPGTLQSLACFNALADDDEDPADNRKSRTGPKVIAQ*
Ga0105058_10466982	3300009837	Groundwater Sand	LPKTVRLSPGEVVTDSTNIVVANDSTHEETLGVYVDVAASSGCTPSGRVLQTTVTLAAGAKTTIAVPVSYSCANVSAANGTVYNWLAVADHGADDLASCGPGSLQGMSCFTALADDDGDDGDNRVSRNAPRIIAQ*
Ga0134070_104504351	3300010301	Grasslands Soil	TPTTSPTPTPNPEGHDARLTRISGVPKTVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIAVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGTLQGLTCFNTLADDDQDPADNRVSRNGPKVVAQ*
Ga0134086_102071932	3300010323	Grasslands Soil	VPKNVRLLPGEVIADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVLQTTITLAAGAKTTLSVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDN
Ga0134086_104905211	3300010323	Grasslands Soil	LGDCSETPTPTPYPAGHDARLTRNSGVAKNVRLLPGEVITDNGSVVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIPLPVSYSCADPAAANGLSYAWVAVADHGGDDLASCGPGALQSLACYNALADDDQDPSDNRLSRNGPKVVAQ*
Ga0134080_103391951	3300010333	Grasslands Soil	VIANQGAHTDIFGVYVDVMAPADGGCSPNGRVLETTVTLAAGAKTTLSVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDNRVSRNGPRVVAQ*
Ga0134062_103135951	3300010337	Grasslands Soil	NQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0137365_101253901	3300012201	Vadose Zone Soil	RNVRLSPGVGTADSGSIVVTNQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKIAISVPVSYSCSDPSAANGLSYTWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0137374_108215832	3300012204	Vadose Zone Soil	GGNASDTAHITVANQSAHTDAIGVYVDVLAPASGSCIPNGRVLQTSVVLAAGAKTTLSVPVNYICSDPTAANGLSYTWVAVADHTGDDLAACPPGSLQSVGCFNALADDDQDPADNRLSRSGPRVVAQ*
Ga0137381_107210572	3300012207	Vadose Zone Soil	VNDSGNILVANQSSHTDAIGVYVDVMPPTAGACSPNGRVLETTVVLAAGAKTTLSVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ*
Ga0137376_101537642	3300012208	Vadose Zone Soil	LTRISGVPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ*
Ga0137376_109895841	3300012208	Vadose Zone Soil	VPKNVRLLPGEVTNDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALA
Ga0137379_102435261	3300012209	Vadose Zone Soil	VNDSGNILVANQSSHTDAIGVYVDVMAPTAGACSPNGRVLETTVVLAAGAKTTLSVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ*
Ga0137379_117342331	3300012209	Vadose Zone Soil	QSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0137377_116995741	3300012211	Vadose Zone Soil	GVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0137367_103072452	3300012353	Vadose Zone Soil	VAKSAHLSPGGNASDTAHITVANQSAHTDAIGVYVDVLAPASGSCIPNGRVLQTSVVLAAGAKTTLSVPVNYICSDPTAANGLSYTWVAVADHTGDDLAACPPGSRQSVGCFNALADDDQDPADNRLSRSGPRVVAQ*
Ga0137367_104522142	3300012353	Vadose Zone Soil	HTDTIGVYVDIVPPASGGCAPSGRVLQMTVTLASGGKTNIPVPVGYSCADPVAANGLGFTWVAAADHGADDLASCPAGSLQGIACFNALADDDQDLGDNRTSRSGPRVIGQ*
Ga0137369_106289292	3300012355	Vadose Zone Soil	SIVVANQSTHSDTIGVYVDVIAPSASGCTPNGRVLQTTVTLAAGAKTTIPAPVNYSCPNPSASDGLSYVWIAVVDHGADDLASCGPGSLQGLTCFNALADDDQDPADNRASRNGPKVVAQ
Ga0137375_103863792	3300012360	Vadose Zone Soil	VHLLPGEVINDSASISVANQSTHSDTIGVYVDVMAPAGCTPNGRVLQTTVTLAAGAKTTIPVFVSYSCANPAAANGLSYTWVAVADHGADDLAACGPGALQGLACFNALADDDEDAADNRLSRNGPTVVAQ*
Ga0137373_106495262	3300012532	Vadose Zone Soil	TRIGGVPKNIRLSAGQVIADSGSITVANQSAHSDTIGVYVDVIAPSASGCAPSGRVLETTVTLAAGAKTTIQAPVGYSCPDPSGADGLSYTWVAVADHGADDLASCGPGSLQGLTCFNALASDDEDPADNRVSRNGPRVVAQ*
Ga0134077_102780561	3300012972	Grasslands Soil	RISGVSRNVRLSPGVGTADSGSIVVTNQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKIAISVPVSYSCSDPSAANGLSYTWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ*
Ga0134076_104457871	3300012976	Grasslands Soil	HADTVGVYVDVMAPAAGGCTPNGRVLQTTVTLNAGAKTTVSVPVSYSCADPTAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALAEDDQDPSDNRVSRNGPRVVAQ*
Ga0134081_103274032	3300014150	Grasslands Soil	VNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPA
Ga0134089_103410701	3300015358	Grasslands Soil	VPKSVRLSPGVGTADSGSIVVANQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCSDAAAANGLSYTWLAVADHGADDLASCGPGTLQSIGCFNALADDDQDPA
Ga0134069_10444801	3300017654	Grasslands Soil	TIGVYVDVMAPSAGGCTPDGRVLQTTITLAAGAKTTLAVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRLSRNGPKVVAQ
Ga0134069_12190221	3300017654	Grasslands Soil	TPNPAGHDARLTRISGVPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPSAGGCTPNGRVLQTTVTLAPGAKTTISVPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ
Ga0134069_12192361	3300017654	Grasslands Soil	TPTPTPTPSPVPVAGHDARLTRVSGVPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVLQTTITLAAGAKTTIPVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDNRVSRNGPRVVAQ
Ga0134112_101238171	3300017656	Grasslands Soil	NVRLSPGVGTADSGSIVVTNQSAHTDTIGVYVDVMAPAAGGCTPNGRVLETTVTLAAGAKIAISVPVSYSCSDPSAANGLSYTWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRLSRNGPRVVAQ
Ga0134074_13154792	3300017657	Grasslands Soil	LPGEVITDNGSVVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIPLPVSYSCADPAAANGLSYTWVAVADHGADDLASCGPGALQSLACYNALADDDQDPSDNRVSRNGPRVVAQ
Ga0184608_102810052	3300018028	Groundwater Sediment	SNHTETIGVYVDVMAPADGGCAPNGRVLETTVTLAARNKTTIPVPVTYSCSAPMAADRQSYSWTAVADHGADEPASCGPGSLQSLACFNALADDEEDTADNRKSRTGPKVIAQ
Ga0184635_101837651	3300018072	Groundwater Sediment	DARLTRIGGVPKNVRLSPGEVIADNANIVVANESNHAETIGVYVDVMAPSGCTPNGRVLQTTVTLGAGNKTTLSVPVSYSCADVSAANGQSYSWTAVADHAADDLASCGPGSLQSLACFNALANDDEDPADNRMSRTGPKVIAQ
Ga0184635_102250141	3300018072	Groundwater Sediment	DARLTRISGVAKNVRLSPGEVITDSASIVVANESNHSETIGVYVDVTAPAAGGCTPNGRVLQTTVTLGAGNKTTIPVPVSYTCSDVAAADGMSYTWLAVADHGADDLSSCGPGTLQSLACFNALADDDADPADNRKTLTGPKVIAQ
Ga0184625_101004361	3300018081	Groundwater Sediment	ISGVPKNVRLSPGEVIADNANIVVANESNHAETIGVYVDVLAPSGCTPNGRVLQTTVTLGAGNKTTIPVPVSYSCADVNAANGQSYTWTAVADHGADDLTSCGAGSLQSLGCFNALADDDADPADNRMSRTGPKVIAQ
Ga0184625_102479112	3300018081	Groundwater Sediment	VFSGSRPNASRLVAGRDPDPASLHEFTADQSFVAGHDARLTRISGVPKNVRLSPGEVIADSASVVVANESNHAETIGVYVDVLAPPGCTPSGRVLQTTVTLAAGAKTTISIPVSYSCTDVSAANGQSYTWTAVADHGADDLASCGPGSLQGLACFNALADDDADPADNRMSRSGPKVIAQ
Ga0184625_104134771	3300018081	Groundwater Sediment	SPSPTPVQAGHDARLSKISGLPKTIRLSQGEVVADSANIVVANDGVQQETIDVYVDVSGADGCTPSGRVLQTTVTLAAGAKTTMSVPVSYSCANVSAADGTVYNWLAVADRGGDDLAACGAGSLQGMSCFVALADDDGDDGDNRVSKNAPRIIAQ
Ga0066655_109512521	3300018431	Grasslands Soil	TGPSGNTSEFSNAVPVSGPTPTPTPTTTGHDARLTRISGVPKSMRLLPGEVVSDSASITVTNQSAHVDTIGVYVDVMAPAAGGCTPNGRVLQTTATLAAGAKTTIAVPVSYSCSDPAAANGLSYTWVAVADHGADDLAACGPGTLQGVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0184642_17213902	3300019279	Groundwater Sediment	GSIVVANQSTHSDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIPVPVSYSCSDPAAANGLSYTWIAVADHGADDLASCPPGSLQSLTCFNALADDDQDPVDNRLSRNGPKVVA
Ga0193739_10501291	3300020003	Soil	LSRIGGVPKNVRLSPGEVIANESANIVVANDSNHTETIGVYADATAPAAGGCRPNGRVLDTTVTLAAGDKINIPVFQDYFCTDVAAANGLSYSWTAVADHGGDDLSSCGVGSLQSLACFNALANDDEDPADNRKSHTGPKVIAQ
Ga0210382_103805821	3300021080	Groundwater Sediment	VPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPSAGGCTPNGRVLQTTVTLNAGAKTTIPVPVSYSCADPAAANGQSYTWIAVADHGGDDLASCPPGSLQGLTCFNALADDDQDPADNRVSRNGPKVVAQ
Ga0209342_103048934	3300025326	Soil	MIGVYVDVRAPSAGGCTPNGRVLETTTTLAAGAKSTISVPVSYSCSDPIAANGLSYTWTAGADHGADDLSPCGMGMLQSMACFNALADDDEDTSDNRMSRAGPQVTAR
Ga0209751_109284531	3300025327	Soil	DMIGVYVDVRAPSAGGCTPNGRVLETTTTLAAGAKSTISVPVSYSCSDPIAANGLSYTWTAGADHGADDLSPCGMGMLQSMACFNALADDDEDTSDNRMSRAGPQVTAR
Ga0207684_100732843	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRISGVPKNLHLLPGEVVADTSSIVVANQSNHTDAIGVYVDLMGPAAGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCADPAAANGLSYIWIAVADHGADDLASCGPGTLQSLTCFNALADDDQDPTDNRVSRNGPKVVAQ
Ga0209761_10796074	3300026313	Grasslands Soil	SGVPRNVRLSTGSVVNDSGNILVANQSSHTDAIGVYVDVMAPAVGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANCLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ
Ga0209801_10462022	3300026326	Soil	ISGLPRNVRLSAGIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209803_10921212	3300026332	Soil	VPKNVRLLPGEVINDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ
Ga0209803_12428012	3300026332	Soil	VRLLPDEVVADTVNISVANQSGHSDTIGVYVEVTPPSFGDCTPTGRVLTTTVTLAPGAKTTIPVLVGYSCREPAAADGVSYTWVAVADHGADDLASCPPGALQSLTCFNALADDDQDPSDNRL
Ga0209377_10085111	3300026334	Soil	SPGIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209377_10357941	3300026334	Soil	SGVPRNVRLSTGSVVNDSGNILVANQSSHTDAIGVYVDVMAPAVGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCPPGSLQGLACYNALADDDQDPADNRATRNGPRVIAQ
Ga0209690_10300511	3300026524	Soil	PAGHDSRLTRINGIAKNIHLSPGGSVSDTASITVANQSGHTDTIGVYVDVLAPTAGGCTPSGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ
Ga0209690_12620411	3300026524	Soil	RISGVPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGSLQGISCFNALADDDQDSSDNRVSRNGPRVVAQ
Ga0209690_13027791	3300026524	Soil	TVRLSPGVGSGDSANVVVANQSTHTDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIALPVSYNCFDPAAANGLSYTWVAVADHGADDLAACGPGTLQGLTCFNALADDDQDPADNRLSRNGPRVIAQ
Ga0209378_10107356	3300026528	Soil	PRNVRLSAGIVVNDTTSVAVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209378_10799152	3300026528	Soil	VPKNVRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPSAGGCTPNGRVLETTVTLAAGAKTTIPVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDSSDNRVSRNGPRVVAQ
Ga0209378_11122923	3300026528	Soil	VRLLPGEVVADSGSIVVANQSTHSDTIGVYVDVMAPASGGCAPNGRVFQTTITLAAGAKTTLSVPVSYSCSDPAAANGLSYTWVAVADHGADDLASCGPGSLQGISCFNALADDDQDSSDNRVSRNGPRVVAQ
Ga0209160_10134037	3300026532	Soil	PTPTCSTCTPTPTPTPPGHDSRLSRISGLPRNVRLSAGIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209058_12020411	3300026536	Soil	VNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209157_13251502	3300026537	Soil	LSTGSVVNDSGNILVANQSSHTDAIGVYVDVMAPAVGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCPPGSLQGLACYNALADDDQDPADNRATRNGPRVIAQ
Ga0209056_100300822	3300026538	Soil	VSRNVRLSPGGVVTNSAGIVVANQSAHSDTIGVYVDVMAPSAGGCTPNGRVLETTVTLAAGVKTTIPVPVSYSCASPAAANGLSFIWVAVADHGADDVAFCGAGTLQGLACFNALADDDEDPADNRASRNGPRVVAQ
Ga0209056_104295953	3300026538	Soil	SGVPRNVRLSTGSVVNDSGNILVANQSSHTDAIGVYVDVMAPAVGGCTPNGRVLETTVTLAAGAKTTISVPVSYSCSDPAAANGLSYIWVAVADHGADDLASCGPGSLQGLTCFNALVSDDEDSADNRATRNGPRVVAQ
Ga0209376_13764622	3300026540	Soil	NQSAHADTIGVYVDVMAPPGCTPNGRDTTTLMWPAGLKGTLSIPVSYSCSDPAAVNGQSFTWVAVADHGADDAASCPVGSLQSVACFDALADDDQDPADNRATRNGPRVIAQ
Ga0209161_101190152	3300026548	Soil	VTPTPTCSTCTPTPTPTPPGHDSRLSRISGLPRNVRLSAGIVVNDTTSVTVVNQSAHTDLIGVYVDAMAPAAGGCTPNGRVLETTITLAAGAKTTLSVPVIYSCLDPAAANDLSFIWVAVADHGADDLASCGVGNLQSVACFDALADDDQDPADNRATRNGPRVVAQ
Ga0209689_10189092	3300027748	Soil	MTRISGVAKNVRLLPGEVVSDSANIVVANESTHEDTIGVYVDVMAPAAGGCTPNGRVLQTTVTLAAGAKTTIPVPVNYSCSDPAAANGLSYTLIAVADHGGDDLAACPPGALQSVACFNALADDDQDPADNRASRNGPKVVAQ
Ga0209689_13264111	3300027748	Soil	INDTATITFANQSTHGDSIGIYVDVIAPAAGGCTPNGRADAVIFTLIAAGAKTTEDVPVSYSCADPAAANGLSYTWVAVADHGGDDLASCGPGALQSLACFNALADDDQDPSDNRVSRNGPRVVAQ
Ga0307308_106442801	3300028884	Soil	TNIVVANQSAHKDTIGVYVDVMAPAAAGCTPNGRVLQTTVTLAAGAKTTIPVPVSYSCSDPAAANGLSFTWMAVADHGADDLAFCVVGNLQSVACFDALADDDQDPADNRLSRNGPRVVA
Ga0364929_0103612_2_403	3300034149	Sediment	KTIRLSQGETLADSANIVVANDGVQQETIGVYVDASGAGDCTPSGRVLQTTVTLAAGAKTTISVPVNYSCANVSAADGTVYNWLAVADRGGDDLAACGPGSLQGMSCFVALADDDGDDGDNRVSKNAPRIIAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077135

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences