NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F077143

Metagenome / Metatranscriptome Family F077143

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077143
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 55 residues
Representative Sequence MVTSSILSPSDCTPQALADFENLVIEGGTVDPQGLAQRIRNASRLLFLRESNGQ
Number of Associated Samples 103
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 34.48 %
% of genes near scaffold ends (potentially truncated) 99.15 %
% of genes from short scaffolds (< 2000 bps) 94.87 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.017 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.513 % of family members)
Environment Ontology (ENVO) Unclassified
(31.624 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.701 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.71%    β-sheet: 14.63%    Coil/Unstructured: 53.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF01914MarC 5.98
PF16363GDP_Man_Dehyd 2.56
PF00076RRM_1 2.56
PF00487FA_desaturase 1.71
PF09935DUF2167 1.71
PF04572Gb3_synth 0.85
PF04984Phage_sheath_1 0.85
PF12697Abhydrolase_6 0.85
PF07978NIPSNAP 0.85
PF11196DUF2834 0.85
PF13884Peptidase_S74 0.85
PF01370Epimerase 0.85
PF12872OST-HTH 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG2095Small neutral amino acid transporter SnatA, MarC familyAmino acid transport and metabolism [E] 5.98
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 1.71
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 1.71
COG3497Phage tail sheath protein FIMobilome: prophages, transposons [X] 0.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.02 %
UnclassifiedrootN/A5.98 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_101685514All Organisms → cellular organisms → Bacteria → Proteobacteria645Open in IMG/M
3300000596|KanNP_Total_noBrdU_T14TCDRAFT_1038949All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia536Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1062936All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300000955|JGI1027J12803_105501461All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300003324|soilH2_10310679All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300004156|Ga0062589_100887983All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria819Open in IMG/M
3300004479|Ga0062595_101120629All Organisms → cellular organisms → Bacteria → Proteobacteria690Open in IMG/M
3300005175|Ga0066673_10471357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium739Open in IMG/M
3300005186|Ga0066676_10301286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1060Open in IMG/M
3300005332|Ga0066388_105657643All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica632Open in IMG/M
3300005334|Ga0068869_101618410All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium577Open in IMG/M
3300005365|Ga0070688_100973631All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005436|Ga0070713_101020114All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300005447|Ga0066689_10116816All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1551Open in IMG/M
3300005447|Ga0066689_10601235All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium693Open in IMG/M
3300005526|Ga0073909_10709055All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005556|Ga0066707_10118984All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300005557|Ga0066704_10094809All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1952Open in IMG/M
3300005560|Ga0066670_10521168All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005561|Ga0066699_11230485All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia514Open in IMG/M
3300005566|Ga0066693_10226788All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium735Open in IMG/M
3300005574|Ga0066694_10130315All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1187Open in IMG/M
3300005576|Ga0066708_10539134All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300005587|Ga0066654_10898250All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Saccharospirillum → Saccharospirillum impatiens509Open in IMG/M
3300005764|Ga0066903_103777010All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia814Open in IMG/M
3300005764|Ga0066903_103867822All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300005764|Ga0066903_104754542All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium722Open in IMG/M
3300005764|Ga0066903_106348233All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium617Open in IMG/M
3300005937|Ga0081455_10045707All Organisms → cellular organisms → Bacteria3807Open in IMG/M
3300005937|Ga0081455_10672582All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia663Open in IMG/M
3300006031|Ga0066651_10794804All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300006049|Ga0075417_10066191All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300006791|Ga0066653_10044869All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1815Open in IMG/M
3300006791|Ga0066653_10702764All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300006796|Ga0066665_10558113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia930Open in IMG/M
3300006796|Ga0066665_10830540All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium725Open in IMG/M
3300006797|Ga0066659_10229555All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300007258|Ga0099793_10257187All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300009090|Ga0099827_11791888All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009137|Ga0066709_100515425All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300009143|Ga0099792_10774681All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium626Open in IMG/M
3300009176|Ga0105242_12910362Not Available529Open in IMG/M
3300009553|Ga0105249_13398729All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia512Open in IMG/M
3300009792|Ga0126374_10863012All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300010043|Ga0126380_11500422All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300010301|Ga0134070_10072650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1177Open in IMG/M
3300010303|Ga0134082_10124156All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1033Open in IMG/M
3300010364|Ga0134066_10056234All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1027Open in IMG/M
3300010373|Ga0134128_11356986All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300010403|Ga0134123_13121721All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium532Open in IMG/M
3300011271|Ga0137393_10281433All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300011998|Ga0120114_1111611All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300012199|Ga0137383_10142549All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1753Open in IMG/M
3300012199|Ga0137383_11230037All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300012201|Ga0137365_10479446All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300012202|Ga0137363_10005956All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae7558Open in IMG/M
3300012202|Ga0137363_11392868All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300012205|Ga0137362_10011303All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus6545Open in IMG/M
3300012205|Ga0137362_10544128All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300012359|Ga0137385_10623388All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium905Open in IMG/M
3300012361|Ga0137360_11073711All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300012469|Ga0150984_113336820All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300012929|Ga0137404_11051449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium746Open in IMG/M
3300012929|Ga0137404_12033871All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012948|Ga0126375_11295788All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300012957|Ga0164303_10010698All Organisms → cellular organisms → Bacteria3181Open in IMG/M
3300012957|Ga0164303_10348363All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300012960|Ga0164301_11523315All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012987|Ga0164307_11566551Not Available557Open in IMG/M
3300013105|Ga0157369_12512817All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
3300013296|Ga0157374_12197226All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300013308|Ga0157375_10909865All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300014154|Ga0134075_10149141All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium999Open in IMG/M
3300014968|Ga0157379_11174032All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300015264|Ga0137403_10272763All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300015371|Ga0132258_13221231All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1125Open in IMG/M
3300015372|Ga0132256_103153882All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300015373|Ga0132257_100753787All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1213Open in IMG/M
3300016341|Ga0182035_10360322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1211Open in IMG/M
3300017657|Ga0134074_1299583All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax585Open in IMG/M
3300018482|Ga0066669_12040581All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300019361|Ga0173482_10367598All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300019869|Ga0193705_1098695All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300019879|Ga0193723_1048408All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300019887|Ga0193729_1161660All Organisms → cellular organisms → Bacteria → Proteobacteria799Open in IMG/M
3300019890|Ga0193728_1340886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia544Open in IMG/M
3300021415|Ga0193694_1023119All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300021418|Ga0193695_1094681All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300021560|Ga0126371_12650895All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300022534|Ga0224452_1284751All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300025916|Ga0207663_10490901All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300025916|Ga0207663_10611589All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300025926|Ga0207659_10822151All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300025930|Ga0207701_10744490All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300025931|Ga0207644_10518087All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300025934|Ga0207686_11073506Not Available656Open in IMG/M
3300025949|Ga0207667_12018826Not Available537Open in IMG/M
3300026305|Ga0209688_1020566All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300026306|Ga0209468_1035220All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1735Open in IMG/M
3300026314|Ga0209268_1016589All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2789Open in IMG/M
3300026333|Ga0209158_1130536All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium933Open in IMG/M
3300026369|Ga0257152_1037781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia524Open in IMG/M
3300026498|Ga0257156_1067987All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium737Open in IMG/M
3300026498|Ga0257156_1069704All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300026538|Ga0209056_10466470All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax694Open in IMG/M
3300026540|Ga0209376_1315457All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium605Open in IMG/M
3300027862|Ga0209701_10663446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium543Open in IMG/M
3300028768|Ga0307280_10363502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium535Open in IMG/M
3300028828|Ga0307312_11113464All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300030972|Ga0075400_11463276Not Available555Open in IMG/M
3300031122|Ga0170822_14441004Not Available1134Open in IMG/M
3300031446|Ga0170820_17236783All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1500Open in IMG/M
3300032074|Ga0308173_10392526All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300032076|Ga0306924_11109557All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300033412|Ga0310810_10578247All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1087Open in IMG/M
3300033551|Ga0247830_11138310All Organisms → cellular organisms → Bacteria623Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.51%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.42%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.71%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.85%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000596Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TCEnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026369Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-AEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030972Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10168551413300000559SoilMLTSSIFSPSDCTAEALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQLVGV
KanNP_Total_noBrdU_T14TCDRAFT_103894913300000596SoilMLTSSVFLPSDCTAQALADFEKLVIEGGAVNPEGLGQRIRNASRLL
AP72_2010_repI_A001DRAFT_106293623300000893Forest SoilMVTSSILSPSDCTPQALADFENLVIEAGTVDRQGLTRRIRDASRLLFVRGSNGQLVGVGA
JGI1027J12803_10550146123300000955SoilMVSSSIVSPSDCTPQALADFESLLAEAATVDPEGLTQRIRHASQLLFLRESNGQLVGVGA
soilH2_1031067933300003324Sugarcane Root And Bulk SoilMVTSSIVSPGDCTPQALADFEKLLLAAGTVDPEGVTQRIRTASRL
Ga0062589_10088798313300004156SoilMVTSSILSPSDCSPQALADFENLVTKYGTVDPQGLTQRIREASRLLFLRESNGQ
Ga0062595_10112062923300004479SoilMVTSYILSPSDCTAQALADFENLVIKYGTVDPEGLTQRIRDASRLLFLRESNGQLVGVG
Ga0066673_1047135713300005175SoilMLTSSIFLPSDCTEQALADFEKLVIEGGSVNPQGLAQRIRNASRLLFLRA
Ga0066676_1030128613300005186SoilMAMLTSSIFLPSDCTAPALADFEKLIIEGGAVNPQGLAERIRKASRLLFLRASDDQLVGVGALKHP
Ga0066388_10565764313300005332Tropical Forest SoilMVTSHVLSPTDCTPQSIADFEKLVIAAETVDPQGLTQRIRDAFRLLFLTEPNGELVGVGGLK
Ga0068869_10161841023300005334Miscanthus RhizosphereMVTFTVLSPAECTPKALADFESLVREGQTVDPEGLTQRISDAHRLLFLRESNG
Ga0070688_10097363113300005365Switchgrass RhizosphereMITSSILSPADCTPKELGDFENLLREGETVDPQGVTQRIREASQLLFLRESNGQLVGVGALKHPLS
Ga0070713_10102011413300005436Corn, Switchgrass And Miscanthus RhizosphereMVTSFILSPSGCSPQAVAEFENLVTKYGTVDPEGLTQRIRDASRLLFLRE
Ga0066689_1011681613300005447SoilMLTSSIFSPSDCTAQALADFEKLVLEGGAVDPQGLAQRIRNAFRLLFLRTSDGQLVG
Ga0066689_1060123523300005447SoilMLTSSIFSPSDCTAEALADFEKLVVEGGTVDPQGLTQRIRNALRLLF
Ga0073909_1070905513300005526Surface SoilMITSSILSPSDCSPQALADFENLLTKYGTIDPEGLTQRIGDAFRLLFLRESNGQL
Ga0066707_1011898413300005556SoilMAMLTSSIFLPSDCTAPALADFEKLIIEGGAVNPQGLAERIRKASRLLFLRASDDQLVGVGALKH
Ga0066704_1009480913300005557SoilMLTSSIFSPSDCTAQALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFL
Ga0066670_1052116833300005560SoilMLTSSIFPPSDCTTEALADFEKLVLKGGTVDPQGLTQRIRNALRLLFLRTSD
Ga0066699_1123048523300005561SoilMLTSSILPPSDCTEQALADFEKLVIKGDSVNPQGLAQRIRNAPRLLFLR
Ga0066693_1022678823300005566SoilMLISSIFSPSDCTPQALTGFEQLVIEGGAVDPQGLAQRIRKASHLLFLRTIDGQLVGVGALK
Ga0066694_1013031513300005574SoilMLISSIFSPSDCTPQALTGFEQLVIEGGAVDPQGLAQRIRKASHLLFLRTIDGQLVG
Ga0066708_1053913413300005576SoilMVTSSILSPSDCTPQALADFENLVVEGGTVDPQGLAQRIRNASRLLFLRESNGQLVGVGALKHPLL
Ga0066654_1089825013300005587SoilMLTSSIFSPSDCTAEALADFEKLVVEGGTVDPQGLTQRIRNAFRLLFLRTSDGQ
Ga0066903_10377701023300005764Tropical Forest SoilMLNSSIFTPSDCTEQALADFEELVVEGGAVSPQGLTERIRDASRLLFLRASDGQLVGVGALKH
Ga0066903_10386782213300005764Tropical Forest SoilMIASSILSPADCTPQQLANFEQLVIEAGTVDPEGLTQRIRAASRLLFLRKSNGQLVGVGA
Ga0066903_10475454223300005764Tropical Forest SoilMVSSSILSPAECTPQALADFEKLLMEAGTVDPQGLTQRIGDASRLLF
Ga0066903_10634823313300005764Tropical Forest SoilMVTSSIVSPSDCTPQALADFESLLTEVATVDPEGLTQRIRQASQLLLLRESNG
Ga0081455_1004570713300005937Tabebuia Heterophylla RhizosphereMLASSIFTPADCTAQALAEFEKLIIEGGAVDPQDLAQRILRGSRLLFLRTADG
Ga0081455_1067258213300005937Tabebuia Heterophylla RhizosphereMLTSSIFLPADCTGQALADFEKLVIAGGAVNPEGLTQRIRNASRLLFLRTPDDQLIGAGALKHPR
Ga0066651_1079480413300006031SoilMLISSVFSPADCTPQALADFEKLVIEGDAVDPRGLAQRIRKAFCLLFLRSSDGELVGAGALKYPR
Ga0075417_1006619113300006049Populus RhizosphereMLTSSIFLPSDCTAQALADFEKLIIAGGAVNPEGLTQRIRNASRLLFL
Ga0066653_1004486913300006791SoilMVTPSIISPSDCSPEALADFENLVTKYGTVDPEGLTQRIRDASRLLFLRESN
Ga0066653_1070276423300006791SoilMLTSSIFSPSDCTAQALADFEKLVIEGGAVDPQGLTQRIRNASRLLFLWASDG
Ga0066665_1055811313300006796SoilMLRSSVFLPSDCTAQALAEFEKLVVEGGAVNPEGLAQRIRNADRLLFLRGLDDHL
Ga0066665_1083054023300006796SoilMLTSSIFSPSDCTVEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRTSDGQLVGVGALKH
Ga0066659_1022955533300006797SoilMLTSSIFSPSDCTAQALADFEKLVLEGGAVDPQGLTQRIRNAFRLL
Ga0099793_1025718723300007258Vadose Zone SoilMFTSSIFLPSNCTAQALADFEKLVIEGGAVNPQGLAQRIHKASRLLFLRASDDQL
Ga0099827_1179188813300009090Vadose Zone SoilMVTSSILSPSDCTPPALADFENLVVEGGTVDPQGLAQRIRNASRLLFLRKSNGQL
Ga0066709_10051542513300009137Grasslands SoilMLTSSVFLPSDCTEQALADFEKLVIEGGCVNPQGLAQRIRNAPRLLFLRASDGQLV
Ga0099792_1077468113300009143Vadose Zone SoilMVTSSILSPSDCTTQALADFENLVIEGGTVDPEGLAERIRNASRLLFLRES
Ga0105242_1291036213300009176Miscanthus RhizosphereMITSSILSPSDCAPQALADFENLVTKYGTVDPEGLMRRIREASRLLFLRELNGQLI
Ga0105249_1339872913300009553Switchgrass RhizosphereMLRSSIFLPSDCTAQALADFEKLVVEGGAVNPEGLGRRIHNASRLLFL
Ga0126374_1086301213300009792Tropical Forest SoilMITSSILSPADCSPQALADFENLVIKGGTVDPEGLIERIRNASRLLFLRES
Ga0126380_1150042223300010043Tropical Forest SoilMVTSSILSPADCTPEALADFEKLLVDAGTVDPQGLSQRIRGASRLLFQRESNGQLVGVGALKHPLPS
Ga0134070_1007265033300010301Grasslands SoilMLRSSIFLPSDCTAQALADFEKLVVEGGAVNPEGLAQRIRNASRLLFLWASD
Ga0134082_1012415633300010303Grasslands SoilMGTSSIISPSDCSPEALADFENLVTKYGTVDPEGLTQRIRDASRLLFLRESNGQVVG
Ga0126372_1299328413300010360Tropical Forest SoilMVTSSVLSPADCTPQAIADFEKLVIGAGTVDPQGLTQRIRDAFRLLFLTEPNGELVGVRGLKYPLLSY
Ga0134066_1005623423300010364Grasslands SoilMLISSIFSPSDCTPQALADFEQLVIEGGAVDPQGLAQRIRQASHLLFLRTIDGQLVGV
Ga0134128_1135698613300010373Terrestrial SoilMISASILLPADCSSEALADFEKLVIEAGTVDPLGLTERIRDASRLLF
Ga0134123_1312172113300010403Terrestrial SoilMVSSSILSPVECTPQALADFEKLIMEAGTVDPQGLTQRIRDASRLLFLRESNGQL
Ga0137393_1028143313300011271Vadose Zone SoilMSSISSPSDCTPQALTDFEQLVIEGAAVDPQGLAQRIRQASHLLFLRR
Ga0120114_111161113300011998PermafrostMVTSSILSPSDCTPQALADFENLVIEGGTVDPQGLAQRIHDASRLLFLRESNGE
Ga0137383_1014254913300012199Vadose Zone SoilMLTSSIFSPADCTAEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRTSDGQLVGV
Ga0137383_1123003713300012199Vadose Zone SoilMLTSSIFSPSDCTAQALADFEKLVIEGGAVDPQGLTQRIRTASRLLFL
Ga0137365_1047944633300012201Vadose Zone SoilMVTSSILSPSDCTAQALADFENLVVEGGTVDPQGLAQRIRNASRLLFLRESN
Ga0137363_10005956113300012202Vadose Zone SoilMLTSSIFSPSDCTAEALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQLVGVGALKHP
Ga0137363_1139286823300012202Vadose Zone SoilMLTSSIFSPSDCTAEALADFEKLIIEGGAVDPQGLTQRIRNAFRLLFLRTSDGQLVGVG
Ga0137362_1001130313300012205Vadose Zone SoilMLTSSIFSPSDCTAEALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQL
Ga0137362_1054412813300012205Vadose Zone SoilMLTSSIVSPSDCTAQALADFEKLVIEGGAVDPQGLTQRIRTASRLL
Ga0137385_1062338813300012359Vadose Zone SoilMLTSSIFSPADCTAEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRTSDGQLVG
Ga0137360_1107371113300012361Vadose Zone SoilMLTSSIVSPSDCTAQALAEFEKLVIEGGAVDPQGLTQRIRTASRLLFLRVSNGQL
Ga0150984_11333682023300012469Avena Fatua RhizosphereMAPMITLSILLPSDCTAQDLADFESLVIEAGTVDAEGLTQRIRDAFRLLFLRGLNGELVGVGALKRPLLDYR
Ga0137404_1105144913300012929Vadose Zone SoilMLTASIFSPSDCTAQALADFEKLVIEGGAIDPQGLTQRIRNAFRLL
Ga0137404_1203387113300012929Vadose Zone SoilMLTSSIFSPSDCTAEALADFEKLVVEGGAVNPQGLTQRIRNAFRLLFLRTSDG
Ga0126375_1129578823300012948Tropical Forest SoilMVTSSIFSPSDCTAQALVDFEELIIEASTVDPQDLRQRIRDASLLLFLTESNGELVGVGALKHPLLTYRNRVFA
Ga0164303_1001069813300012957SoilMITSSILSPSDCSPQALADFENLLTKYGTIDPEGLTQRIGDAFRLLFLRESNGQLVGV
Ga0164303_1034836323300012957SoilMLTSSILSPSDCSPQAVADFENLVTKYGTVDPEGVTQRIREASRLLFLRESNGRLVGV
Ga0164301_1152331513300012960SoilMITSSILSPSDCAPQALADFENLITKYGTVDPEGLTQRIRDASRLLFLRESNGQLV
Ga0164307_1156655113300012987SoilMVTSSILSPSDCSPQAVADFENLVTKYGTIDPEGLTQRIGDAFRLLFLRESNGQLVGVG
Ga0157369_1251281713300013105Corn RhizosphereMITSSILSPADCTPKELGDFENLLTEGETVDPQGLTQRIREASQLLFLRESNGQLVGVGA
Ga0157374_1219722613300013296Miscanthus RhizosphereMITSSILSPADCTRKELGDFENLLTEGETVDPQGLTQRIREASQLLFLRESNGQLVGVGALKHPLSSYR
Ga0157375_1090986513300013308Miscanthus RhizosphereMVTSSILLPSDCTPQALADFENLVIEGGTVDPQGLAQRIRNASRLLFLRESNGQ
Ga0134075_1014914123300014154Grasslands SoilMLTSSIFSPADCTAEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLR
Ga0157379_1117403213300014968Switchgrass RhizosphereMITSSILSPADCTPKELGDFENLLREGETVDPQGLTQRIREASQLLFLRESNGQLVGVGALKHPLSSYR
Ga0137403_1027276313300015264Vadose Zone SoilMVTSSILSPSDCTPQALVDFENLVIEGGTVDPQGLAERIRNASRLLFLRESNGQLV
Ga0132258_1322123113300015371Arabidopsis RhizosphereMVTSSILFPSDCTAQALADFENLVIEGGTVDPQGLAQRIRDASRLLF
Ga0132256_10315388213300015372Arabidopsis RhizosphereMITSSILWPADCTPKELGDFENLLREGETVDPQGLTQRIREASQLLFLRESNGQLVGVGALKHPLSSYRAKVF
Ga0132257_10075378733300015373Arabidopsis RhizosphereMVSSSILSPVECTPQALADFEKLIMEAGTVDPQGLTQRIRDASRLLFLRE
Ga0182035_1036032243300016341SoilMVTSSIVSPADCTPQALADFETLVIEAAAVDPQGLTQRIRDASQLVFLRESNGQLVG
Ga0134074_129958313300017657Grasslands SoilMLTSSIFSPADCTAEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRTSDGQLVGVGALKHP
Ga0066669_1204058113300018482Grasslands SoilMLTSSIFSPSDCTAEALADFEKLVVEGGAVDPQGLTQRIRNAFRLLFLRTSDGQ
Ga0173482_1036759813300019361SoilMVTSSILLPSDCSPQALADFENLVTKYGTVDPEGLTQRIRDAFRLLFLR
Ga0193705_109869513300019869SoilMVTSSILSPSDCFPQALADFENLVTKYGTVDPEGLTQRIRDASRLLFLRESNGQLVGVGALKRP
Ga0193723_104840833300019879SoilMVTSCILSPSDCTPQALADFENLVIEGGTVDPQGLAQRIRDASRLLFLRESNGE
Ga0193729_116166023300019887SoilMLTSSIVSPSDCTAQALAEFEKLVIEGGAVDPQGLTQRIRNASRLLFLR
Ga0193728_134088613300019890SoilLPSDCTAQALADFEKLVVEGGAVNPEGLAQRIRNASRLLFLRAS
Ga0193694_102311913300021415SoilMVTSSILSPSDCTPQALADFENLVIEGGTVDPQGLAQRIRNASRLLFLRESNGQ
Ga0193695_109468123300021418SoilMLTSSIFSPSDCTAEALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQLVGVG
Ga0126371_1265089513300021560Tropical Forest SoilMITSSILSPGDCTQQALAEFEKLVIEAGTVDPQGLGQRIRDASQLLFLRESDGQLVGI
Ga0224452_128475123300022534Groundwater SedimentMVTSSILSPADCTPQTLADFEKLVIEAGTVDPQGLMQRIRDASRLLFLRESNGEL
Ga0207663_1049090113300025916Corn, Switchgrass And Miscanthus RhizosphereMVTSFIVSPSDCSPQAVAEFENLVTKYGTIDPEGLTQRIRDASRLL
Ga0207663_1061158913300025916Corn, Switchgrass And Miscanthus RhizosphereVFTSSIFSPSDCTAEALTDFEKLVIEGGAVNPEGLAQRIRKDSRLLFLRASDNQ
Ga0207659_1082215113300025926Miscanthus RhizosphereMITSSILSPADCTPKELGDFENLLREGETVDPQGLTQRIREASQLLFLRESNGQLVGVGALKHP
Ga0207701_1074449013300025930Corn, Switchgrass And Miscanthus RhizosphereMITSSIFSPSDCAAKALADFENLVIEAGTVDPEGLTQRIRDAFRLLFLRESNGQLVGVG
Ga0207644_1051808723300025931Switchgrass RhizosphereMVTSSILLPSDCSPQALADFENLVTKYGTVDPEGLTQRIRDAFRLLFLRGSNGE
Ga0207686_1107350613300025934Miscanthus RhizosphereMITSSILSPSDCAPQALADFENLVTKYGTVDPEGLMQRIREASRLLF
Ga0207667_1201882613300025949Corn RhizosphereMVTSSILLPSDCPPQALADFENLVTKYGTVDPEGLTQRIRDAFRLLFLRGSNGELVGVGAVKR
Ga0209688_102056613300026305SoilMLTSSIFLPSDCTEQALADFEKLVIEGGSVNPQGLAQRIRNASRLLF
Ga0209468_103522013300026306SoilMLTSSIFSPSDCTVEVLADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRTSDGQLVGVGALKHPRPTY
Ga0209268_101658913300026314SoilMLTSSIFSPSDCTVEALADFEKLVLEGGAVNPQGLTQRIRNAFRLLFLRASDGQLV
Ga0209158_113053613300026333SoilMLISSIFSPSDCTPQALTGFEQLVIEGAAVDPQGLAQRIRKASHLLFLRTIDGQLVGAGA
Ga0257152_103778113300026369SoilMLTSSIFLPSDCTAQALADFEKLVIEGGAVNPQGLVQRIRKASRLLFLRA
Ga0257156_106798713300026498SoilMLTSSIFSPSDCTAEALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDG
Ga0257156_106970413300026498SoilMLTSSIFSPSDCTAEALADLEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQLVGV
Ga0209056_1046647013300026538SoilMLTSSIFSPSDCTAQALADFEKLVLEGGAVDPQGLTQRIRNAFRLLFLRTSDGQ
Ga0209376_131545713300026540SoilMLTSSIFSPSDCTVEVLADFEKLVLEGGAVNPQGLTQRIRNAFRLLFL
Ga0209701_1066344623300027862Vadose Zone SoilMSSISSPSDCTPQALTDFEQLVIEGAAVDPQGLAQRIRQASHLLFLRRIDGQLVGAGALK
Ga0307280_1036350223300028768SoilMITSSTLSPSECSPQALADFENLVIEAGTVDPEGLTQRIREASRLLF
Ga0307312_1111346413300028828SoilMLTSSIVSPSDCTAQALADFEKLVIEGGAVDPQGLTQRIRSASRLLFLRASD
Ga0075400_1146327623300030972SoilMITSSILSPSDCSPQALADFENLLTKYGTIDPEGLTQRIGDAFRLLFLRESNG
Ga0170822_1444100413300031122Forest SoilMITSSILSPSDCAPQALADFENLVTKYGTVDPEGLTQRIRDASQLLFLRGSNGQL
Ga0170820_1723678343300031446Forest SoilMVTSSILSPSDCTPQALADFESLVTKYGTVDPQGLTKRIRDAFRLLFLRESNGQLVGVGALKR
Ga0308173_1039252613300032074SoilMVISSILLPSDCSPEVLADFENLVTEYGTVDPEGLTQRIRDAFRLL
Ga0306924_1110955713300032076SoilMVSSSIFSPAECTPQALADFGKLVMEAGTVDPQGLTQRIRDASRLLFL
Ga0310810_1057824713300033412SoilMLTSSIFLPSDCTAQALADFEKLVVEGGAVNPRGLAQRIRNASRLLFLRASDDQL
Ga0247830_1113831023300033551SoilMVTSSIISPSDCSPEALADFENLVTKYGTVDPEGLTQRIRDASRLLFLRDSNGQL


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