Metagenome / Metatranscriptome Family F077156

Basic Information
Family ID	F077156
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	60 residues
Representative Sequence	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDS
Number of Associated Samples	91
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	21.37 %
% of genes near scaffold ends (potentially truncated)	36.75 %
% of genes from short scaffolds (< 2000 bps)	94.87 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Most Common Taxonomy
Group	Unclassified (56.410 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.932 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.684 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.71% β-sheet: 0.00% Coil/Unstructured: 95.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04240	Caroten_synth	12.82
PF03631	Virul_fac_BrkB	0.85
PF00083	Sugar_tr	0.85
PF12277	DUF3618	0.85
PF13520	AA_permease_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2324	Uncharacterized membrane protein	Function unknown [S]	12.82
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
All Organisms	root	All Organisms	43.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
cellular organisms	root	All Organisms → cellular organisms	43.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	11.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	11.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.41 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	9.40 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320002\|FACENCE_FW6223E01BL251	Not Available	581	Open in IMG/M
3300004157\|Ga0062590_102209903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300005327\|Ga0070658_11374091	Not Available	613	Open in IMG/M
3300005329\|Ga0070683_100573101	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005334\|Ga0068869_101921082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300005337\|Ga0070682_100750183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300005339\|Ga0070660_101921243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300005347\|Ga0070668_101995774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300005356\|Ga0070674_100940450	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005441\|Ga0070700_101411093	Not Available	589	Open in IMG/M
3300005466\|Ga0070685_10676456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005543\|Ga0070672_101552809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300005548\|Ga0070665_100338291	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005562\|Ga0058697_10250703	Not Available	825	Open in IMG/M
3300005578\|Ga0068854_100562715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300005616\|Ga0068852_101863990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300005618\|Ga0068864_102302715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300006755\|Ga0079222_10561329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300006844\|Ga0075428_102230787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	564	Open in IMG/M
3300006852\|Ga0075433_11744817	Not Available	536	Open in IMG/M
3300006880\|Ga0075429_100972883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300006880\|Ga0075429_101623017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300009094\|Ga0111539_10343870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1736	Open in IMG/M
3300009094\|Ga0111539_13088212	Not Available	537	Open in IMG/M
3300009156\|Ga0111538_10199415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2539	Open in IMG/M
3300009789\|Ga0126307_10172441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1734	Open in IMG/M
3300009840\|Ga0126313_10248339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1380	Open in IMG/M
3300010042\|Ga0126314_10372380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1027	Open in IMG/M
3300010045\|Ga0126311_11048818	Not Available	668	Open in IMG/M
3300010375\|Ga0105239_10452580	Not Available	1457	Open in IMG/M
3300010375\|Ga0105239_11745970	Not Available	721	Open in IMG/M
3300010401\|Ga0134121_11284109	Not Available	736	Open in IMG/M
3300010401\|Ga0134121_12364798	Not Available	571	Open in IMG/M
3300011332\|Ga0126317_10351922	Not Available	593	Open in IMG/M
3300011333\|Ga0127502_10094861	Not Available	759	Open in IMG/M
3300012212\|Ga0150985_100357652	Not Available	505	Open in IMG/M
3300012492\|Ga0157335_1048480	Not Available	501	Open in IMG/M
3300012986\|Ga0164304_11747886	Not Available	520	Open in IMG/M
3300013307\|Ga0157372_11970697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300013308\|Ga0157375_12310779	Not Available	641	Open in IMG/M
3300014326\|Ga0157380_13350523	Not Available	512	Open in IMG/M
3300014487\|Ga0182000_10378166	Not Available	620	Open in IMG/M
3300014497\|Ga0182008_10286256	Not Available	859	Open in IMG/M
3300014497\|Ga0182008_10394546	Not Available	742	Open in IMG/M
3300015371\|Ga0132258_10151595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5561	Open in IMG/M
3300015374\|Ga0132255_100041475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	5925	Open in IMG/M
3300017792\|Ga0163161_11246628	Not Available	645	Open in IMG/M
3300017965\|Ga0190266_10267221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300018081\|Ga0184625_10283820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300018422\|Ga0190265_10325468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1616	Open in IMG/M
3300018432\|Ga0190275_10534855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1211	Open in IMG/M
3300018465\|Ga0190269_10230650	Not Available	1027	Open in IMG/M
3300018466\|Ga0190268_10009041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2688	Open in IMG/M
3300018466\|Ga0190268_10137819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1220	Open in IMG/M
3300018466\|Ga0190268_10367296	Not Available	906	Open in IMG/M
3300018466\|Ga0190268_10477345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	836	Open in IMG/M
3300018469\|Ga0190270_10913267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300018469\|Ga0190270_12189263	Not Available	613	Open in IMG/M
3300018476\|Ga0190274_10317961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1460	Open in IMG/M
3300018476\|Ga0190274_10590912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300018481\|Ga0190271_10570791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1248	Open in IMG/M
3300018920\|Ga0190273_10071572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1838	Open in IMG/M
3300018920\|Ga0190273_10377558	Not Available	986	Open in IMG/M
3300018920\|Ga0190273_10469305	Not Available	910	Open in IMG/M
3300018920\|Ga0190273_10543681	Not Available	862	Open in IMG/M
3300018920\|Ga0190273_10632808	Not Available	815	Open in IMG/M
3300018920\|Ga0190273_11017717	Not Available	685	Open in IMG/M
3300018920\|Ga0190273_11395792	Not Available	611	Open in IMG/M
3300019377\|Ga0190264_10784647	Not Available	722	Open in IMG/M
3300019767\|Ga0190267_10632740	Not Available	671	Open in IMG/M
3300019767\|Ga0190267_10892861	Not Available	607	Open in IMG/M
3300020069\|Ga0197907_10338545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300020081\|Ga0206354_11206518	Not Available	685	Open in IMG/M
3300020082\|Ga0206353_11625474	Not Available	695	Open in IMG/M
3300022467\|Ga0224712_10156598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013	Open in IMG/M
3300022467\|Ga0224712_10479416	Not Available	600	Open in IMG/M
3300025321\|Ga0207656_10174844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300025919\|Ga0207657_10466589	Not Available	990	Open in IMG/M
3300025937\|Ga0207669_10492947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300025961\|Ga0207712_10520792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300025981\|Ga0207640_10133938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1796	Open in IMG/M
3300026067\|Ga0207678_10293543	Not Available	1396	Open in IMG/M
3300026089\|Ga0207648_12194211	Not Available	513	Open in IMG/M
3300026095\|Ga0207676_11648977	Not Available	639	Open in IMG/M
3300026116\|Ga0207674_11580060	Not Available	625	Open in IMG/M
3300026121\|Ga0207683_10130639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2259	Open in IMG/M
3300027761\|Ga0209462_10061003	Not Available	774	Open in IMG/M
3300027809\|Ga0209574_10048660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1073	Open in IMG/M
3300028587\|Ga0247828_10074719	Not Available	1539	Open in IMG/M
3300028587\|Ga0247828_10760816	Not Available	610	Open in IMG/M
3300028587\|Ga0247828_11144606	Not Available	518	Open in IMG/M
3300028589\|Ga0247818_10558399	Not Available	784	Open in IMG/M
3300028590\|Ga0247823_10625807	Not Available	810	Open in IMG/M
3300028590\|Ga0247823_11381637	Not Available	528	Open in IMG/M
3300028592\|Ga0247822_11535275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300028592\|Ga0247822_11882609	Not Available	512	Open in IMG/M
3300028596\|Ga0247821_10493643	Not Available	777	Open in IMG/M
3300028803\|Ga0307281_10358384	Not Available	553	Open in IMG/M
3300028809\|Ga0247824_10453698	Not Available	749	Open in IMG/M
3300028812\|Ga0247825_10566185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300030336\|Ga0247826_10058169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2201	Open in IMG/M
3300030336\|Ga0247826_10894062	Not Available	700	Open in IMG/M
3300030336\|Ga0247826_11196356	Not Available	609	Open in IMG/M
3300030502\|Ga0268258_10070434	Not Available	732	Open in IMG/M
3300031852\|Ga0307410_11871405	Not Available	534	Open in IMG/M
3300031938\|Ga0308175_101342831	Not Available	797	Open in IMG/M
3300031995\|Ga0307409_102777536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300031996\|Ga0308176_10549123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1181	Open in IMG/M
3300032002\|Ga0307416_102027345	Not Available	678	Open in IMG/M
3300032080\|Ga0326721_10140980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211	Open in IMG/M
3300032080\|Ga0326721_10364649	Not Available	826	Open in IMG/M
3300032080\|Ga0326721_10972589	Not Available	541	Open in IMG/M
3300032159\|Ga0268251_10174434	Not Available	827	Open in IMG/M
3300033551\|Ga0247830_10359716	Not Available	1126	Open in IMG/M
3300034005\|Ga0334930_041063	Not Available	767	Open in IMG/M
3300034027\|Ga0334949_127719	Not Available	658	Open in IMG/M
3300034781\|Ga0334935_238409	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.83%
Host-Associated	Host-Associated	40.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.27%
Plants	Host-Associated → Plants	40.17%
Aquatic	Environmental → Aquatic	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.82%
Phylloplane	Host-Associated → Plants → Phylloplane	2.56%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.71%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.71%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.56%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320002	Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030502	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCEE_5006130	2032320002	Soil	VTAPDTDPAYAQGDQDAEPTMTXPPGQRPDAASTSDAPDASDEYADKPDAEGAS
Ga0062590_1022099032	3300004157	Soil	MADTDPVTSPDTDPAYAQGDQDAEATMTAPSGPRPDAATHPDPSDEYADKPDAEGDS*
Ga0070658_113740912	3300005327	Corn Rhizosphere	VCQDAPTGYAQGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0070683_1005731012	3300005329	Corn Rhizosphere	VCQDAPTGYAQGMADTDPITSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0068869_1019210822	3300005334	Miscanthus Rhizosphere	RGESKKPVGRAEAVCGTPRRGYASGMAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDS*
Ga0070682_1007501831	3300005337	Corn Rhizosphere	MADTDPVTAPATDPAYAQGDQDAEPTMTAPSGPRPDAATQPDAADEYADKPDAEGDS*
Ga0070660_1019212432	3300005339	Corn Rhizosphere	VTGVPVRADGVRRGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDE
Ga0070668_1019957742	3300005347	Switchgrass Rhizosphere	GGAGSRASGYACGMADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAEGDS*
Ga0070674_1009404501	3300005356	Miscanthus Rhizosphere	GVRRGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0070700_1014110932	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VTGVPGRADGVRPGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0070685_106764561	3300005466	Switchgrass Rhizosphere	VEVRRCRAAAIGYAVAMADTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDGATDPDPSDEYEDKPPAEGDS*
Ga0070672_1015528092	3300005543	Miscanthus Rhizosphere	IGYAVAMADTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDGATDPDPSDEYEDKPPAEGDS*
Ga0070665_1003382914	3300005548	Switchgrass Rhizosphere	ATDPAYAQGDQDAEPTMTAPSGPRPDAATQPDAADEYADKPDAEGDS*
Ga0058697_102507032	3300005562	Agave	MADTDPITSPDTDPAYAQGDQDAEPTMTAPPGDRPDAATNPESSADSATPADAEGAS*
Ga0068854_1005627152	3300005578	Corn Rhizosphere	MADTDPVTAPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0068852_1018639902	3300005616	Corn Rhizosphere	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0068864_1023027151	3300005618	Switchgrass Rhizosphere	MADTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDGATDPDPSDEYEDKPPAEGDS*
Ga0079222_105613292	3300006755	Agricultural Soil	MADTDPVTAPQTDPAHAEGDQDAEPTMTAPSGPRPDAAVHPDSSDEYADKPDAEGDS*
Ga0075428_1022307872	3300006844	Populus Rhizosphere	SGMAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS*
Ga0075433_117448172	3300006852	Populus Rhizosphere	MADTDPVTAPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAE
Ga0075429_1009728831	3300006880	Populus Rhizosphere	GRRPVCGAPVGGYAPGMPDTDPVTSPATDPAYAQGDRDAEPTMTAPSGERPDAATDPDPSDEYADKPEAEGAS*
Ga0075429_1016230171	3300006880	Populus Rhizosphere	MAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEG
Ga0111539_103438702	3300009094	Populus Rhizosphere	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDADGDS*
Ga0111539_130882121	3300009094	Populus Rhizosphere	RRGESKKPVGRAEAVCGTPRRGYASGMAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS*
Ga0111538_101994154	3300009156	Populus Rhizosphere	CQDAPTGYARGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0126307_101724412	3300009789	Serpentine Soil	MADTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPESSAESAEPTDAEGAS*
Ga0126313_102483391	3300009840	Serpentine Soil	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPPGQRPDAAGTSDASGAADEYADKPDAEGAS
Ga0126314_103723801	3300010042	Serpentine Soil	MADTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPEGSADSAEPTDAEGAS*
Ga0126311_110488182	3300010045	Serpentine Soil	MANTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPESSAESAEPTDAEGAS*
Ga0105239_104525802	3300010375	Corn Rhizosphere	MADTDPITSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0105239_117459701	3300010375	Corn Rhizosphere	MADTDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS*
Ga0134121_112841092	3300010401	Terrestrial Soil	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAEGDS*
Ga0134121_123647981	3300010401	Terrestrial Soil	MAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS*
Ga0126317_103519222	3300011332	Soil	ADTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPEGSADSAEPTDAEGAS*
Ga0127502_100948611	3300011333	Soil	DPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPESSAESAEPTDAEGAS*
Ga0150985_1003576521	3300012212	Avena Fatua Rhizosphere	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPAGQRPDAGTDPEGSADAAEPSDAEGAS*
Ga0157335_10484802	3300012492	Arabidopsis Rhizosphere	MADTDPVTSPDTDPAYAQGDQDAEATMTAPSGPRPDGATHPDPSDEYADKPDAEGDS*
Ga0164304_117478861	3300012986	Soil	MADTDPVTSPDTGPAYAQGDQDAEPTMTAPSGPRPDAAVHPDPSDEYADKPDAEGDS*
Ga0157372_119706971	3300013307	Corn Rhizosphere	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDS*
Ga0157375_123107791	3300013308	Miscanthus Rhizosphere	DPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS*
Ga0157380_133505231	3300014326	Switchgrass Rhizosphere	MADTDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAETHPDPSDEYADKPDAEGDS*
Ga0182000_103781661	3300014487	Soil	PVTAPDTDPAYAQGDQDAEATMTAPPGQRPDTAGTSDASGAAGEYADKPDAEGAS*
Ga0182008_102862562	3300014497	Rhizosphere	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPPGDRPDGAVDPDASAEGAEPADAEGAS*
Ga0182008_103945463	3300014497	Rhizosphere	AVRMTEPTTDPVTSPATDPAYAQGDEDAEPTMTAPSGPRPDGALHPDPSDEYADKPEAEGDS*
Ga0132258_101515954	3300015371	Arabidopsis Rhizosphere	MADTDPVTSPDTDPAYAEGDQDAEATMTAPSGPRPDGATHPDPSDEYADKPDAEGDS*
Ga0132255_1000414756	3300015374	Arabidopsis Rhizosphere	GYAQGMADADPVTSPDTDPAYAQGDQDAEATMTAPSGPRPDGATHPDPSDEYADKPDAEGDS*
Ga0163161_112466282	3300017792	Switchgrass Rhizosphere	VCQDAPTGYAQGMADTDPVTSPATDPAYAQGDQDAEPTMAAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0190266_102672212	3300017965	Soil	MADTDPVTSPDTDPAYAQGDQDAEATMTAPSGPRPDAATHPDPSDEYADKPDAEGDS
Ga0184625_102838202	3300018081	Groundwater Sediment	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDSWPGRYAD
Ga0190265_103254682	3300018422	Soil	MADTDPVTSPDTDPAHAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAEGDS
Ga0190275_105348551	3300018432	Soil	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAE
Ga0190269_102306503	3300018465	Soil	VPVRCGQIWRVSWVRRCRPAATGYAVRMADTDPVTSPPTDPAYAQGDQDAEPTMTAPSGPRPDAASHPDASDEYADKPDAEGAS
Ga0190268_100090412	3300018466	Soil	MTREIVVTADPSGYARDMADTDPVTSPDTDPAYAEGDQDAEPSMTAPPGQRPDAATDPEASAGGAEPADDEGAS
Ga0190268_101378192	3300018466	Soil	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDAASHPDASDEYADKPDAEGAS
Ga0190268_103672962	3300018466	Soil	MADTDPVTSPDTDPAYAQGDQDAEPPLTAPPGVRPDAATDPEGSAGNAEPADAEGAS
Ga0190268_104773452	3300018466	Soil	MADTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPESSAESAEPTDAEGAS
Ga0190270_109132671	3300018469	Soil	EHCATGYAPDMADTDPVTSPPTDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYAAKPDAEGNS
Ga0190270_121892631	3300018469	Soil	MADTDPVTSPDTDPAYAQGDQDAEPTLTAPPGSRPDAATDPEGSADSAE
Ga0190274_103179612	3300018476	Soil	MADTDPVTSPPTDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0190274_105909122	3300018476	Soil	MADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAEGDS
Ga0190271_105707912	3300018481	Soil	MADTDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0190273_100715722	3300018920	Soil	MTDTDPVTSPDTDPAYAQGDQDAEPPLTAPPGVRPDAATDPEGSAENAEPADAEGAS
Ga0190273_103775582	3300018920	Soil	MADTDPVTAPDTDPAYAQGDQDAEPTMTAPPGQRPDAASTSDASDEYADKPDAEGAS
Ga0190273_104693052	3300018920	Soil	MRASGYAQGMADTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATHPDPSDEYADKPEAEGDS
Ga0190273_105436811	3300018920	Soil	MADTDPVTAPDTDPAYAQGDQDDQDAEPTMTAPSGSRPDAASHPDASDEYADKPDAEGDS
Ga0190273_106328082	3300018920	Soil	MCREAATGYAYRMADTDPVTSPATDPAYAQGDEDAEPTMTASSGPRPDGAVDPDPADEYADKPDAEGDS
Ga0190273_110177172	3300018920	Soil	MADTDPVTSPETDPAYTQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0190273_113957922	3300018920	Soil	IRRVSWVRRCRPAATGYAVRMADTDPVTAPDTDPAYVQGDQDADPTMTAPSGSRPDAASDPDASDEYADKPDAEGDS
Ga0190264_107846471	3300019377	Soil	MHHSGYASDMADTDPITSPETDPAYAQGDQDAEPTMTAPPGDRPDAATDVDASADSATPTDAEGAS
Ga0190267_106327402	3300019767	Soil	VERGAAGYAPGMTEPTTDPVTSPDTDPAYAQGDQDAEPTMTAPSGPRPDAATDPDATDEYADKP
Ga0190267_108928611	3300019767	Soil	VRGGLRSAGAGRCRPGGRGYAVRMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDAASHPDASDEYADKPDAEGDS
Ga0197907_103385451	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	TDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0206354_112065181	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VTGVPVRADGVRRGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0206353_116254742	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VCQDAPTGYAQGMADTDPITSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0224712_101565983	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	DPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0224712_104794161	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	TDPVTAPATDPAYAQGDQDAEPTMTAPSGPRPDAATQPDAADEYADKPDAEGDS
Ga0207656_101748442	3300025321	Corn Rhizosphere	VCQDAPTGYAQGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0207657_104665892	3300025919	Corn Rhizosphere	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0207669_104929471	3300025937	Miscanthus Rhizosphere	MAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0207712_105207921	3300025961	Switchgrass Rhizosphere	PVTSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0207640_101339382	3300025981	Corn Rhizosphere	MADTDPVTAPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0207678_102935432	3300026067	Corn Rhizosphere	VCQDAPTGYAQGMADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDAAVHPDPSDEYADKPDAEGDS
Ga0207648_121942112	3300026089	Miscanthus Rhizosphere	TSPETDPAYAQGDQDAEPTMTAPSGLRPDAETHPDPSDEYADKPAAEGNS
Ga0207676_116489772	3300026095	Switchgrass Rhizosphere	REARREARRERVEVRRCRAAAIGYAVAMVDTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDGATDPDPSDEYEDKPPAEGDS
Ga0207674_115800601	3300026116	Corn Rhizosphere	RSGYALAMADTDPVASPDTDPAYYAQGDQDAEPTMMAPSGPGPDAALHADPSDEHADKPAAEGDS
Ga0207683_101306392	3300026121	Miscanthus Rhizosphere	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDAAVHPDPSDEYADKPDAEGDS
Ga0209462_100610032	3300027761	Agave	MADTDPVTSPATDPAYAQGDQDAEPTMTAPSGPRPDAATEADPSDEYADKPEAEGDS
Ga0209574_100486601	3300027809	Agave	MADTNPITSPDTDPAYAQGDQDAEPTMTAPPGDRPDAATNPESSADSATPADAEGAS
Ga0247828_100747191	3300028587	Soil	VCGTLRSGYALDMADTDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDS
Ga0247828_107608161	3300028587	Soil	VCGAPAGGYAPGMADTDPVTSPATDPAYAQGDQDEEPTMTAPSGERPDAATDPDPSDEYADKPEAEGAS
Ga0247828_111446061	3300028587	Soil	MADTDPDTDPDTDPVTPPETDPAYARGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0247818_105583991	3300028589	Soil	MADTDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGDS
Ga0247823_106258071	3300028590	Soil	VEVRRCRAAAIGYAVAMADTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDGATDPDPSDEYEDKPPAEGDS
Ga0247823_113816371	3300028590	Soil	MADTDPVTSPETDPAYARGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0247822_115352751	3300028592	Soil	VGTPPGMADTDPVTSPDTDPAYAQADQDAEATMTAPSGPRPDGATHPDPSDEYADKPDAEGDS
Ga0247822_118826091	3300028592	Soil	PDTDPVTPPETDPAYARGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGNS
Ga0247821_104936432	3300028596	Soil	MADTDPDTDPVTSPETDPAYARGDQDAEPTMTAPSGLRPDAATHPDPSDEYADKPDAEGN
Ga0307281_103583842	3300028803	Soil	MTDTDPVTSPDTDPAYAQGDQDAEPTMTAPSELRPDAATHPDPSDEYADKPDAEGDS
Ga0247824_104536982	3300028809	Soil	MAETDPVTSPETDPAYAQGDQDAEPTMTAPSGRRPDAATHPDPSDEYADKPDAEGNS
Ga0247825_105661851	3300028812	Soil	ADTDPVTSPATDPAYAQGDQDEEPTMTAPSGERPDAATDPDPSDEYADKPEAEGAS
Ga0247826_100581694	3300030336	Soil	TSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYADKPDAEGDS
Ga0247826_108940621	3300030336	Soil	VCQDAPTGYAQGMADTDPITSPATDPAYAQGDQDAEPTMTAPSGPRPDGATQPDASDEYA
Ga0247826_111963561	3300030336	Soil	MAETDPVTSPETDPAYAQGDQDAEPTMTAPSGLRPDAETHPDPSDEYADKPAAEGNS
Ga0268258_100704341	3300030502	Agave	MADTDPVTSAATDPAHAQGDQDAEPTMTAPSGPRPDAATEADPSDEY
Ga0307410_118714052	3300031852	Rhizosphere	MDPKGYTRDMADTDPVTSPDTDPAYAEGDQDAEPSMTAPPEQRPDAATDPEASAGRAEPADAEGAS
Ga0308175_1013428312	3300031938	Soil	MADTDPVTSPDTDPVNAQDDQDKEPSLSAPPGDRPDGAQDPGLSADRAEPWDAEGAG
Ga0307409_1027775362	3300031995	Rhizosphere	GETDPKGYTRDMADTDPVTSPDTDPAYAEGDQDAEPSMTAPPEQRPDAATDPEASAGRAEPADAEGAS
Ga0308176_105491232	3300031996	Soil	MADTDPVTSPVTDPAYTQGDQDSEGTMTAPSGPRPDAATHPDSSDEYADKPDAEGDS
Ga0307416_1020273452	3300032002	Rhizosphere	MADTDPVTSPDTDPAYAEGDQDAEPSMTAPPEQRPDAATDPEASAGRAEPADAEGAS
Ga0326721_101409803	3300032080	Soil	AGYACGMADTDPVTSPETDPAYAQGDQDAEAPLTAPPGIRPDAAIDPEGSADSAEPADAEGAS
Ga0326721_103646492	3300032080	Soil	MADTDPVTSPETDPAYAQGDQDAEPPMTAPPGVRPDAAIDPEGSADSAEPADAEGAS
Ga0326721_109725891	3300032080	Soil	MADTDPVTSPDTDPANAQGDQDAEPTMTAPSGPRPDAATHPDASDEYADKPAAEGDS
Ga0268251_101744342	3300032159	Agave	MADTDPITSPDTDPAYAQGDQDAEPTMTAPPGDRPDAATNPESSADSATPADAEGAS
Ga0247830_103597161	3300033551	Soil	MADTDPDTDPVTSPETDPAYARGDQDAEPTMTAPSGLRPDAATHPDPSDEYADK
Ga0334930_041063_534_707	3300034005	Sub-Biocrust Soil	MDDTDPVTSPATDPAYAQGDQDTEAPLTAPGGERPDGATDAGASEDAATPPAAEGAS
Ga0334949_127719_20_193	3300034027	Biocrust	MADTDPVTSPATDPAYAQGDQDTEAPLTAPGGERPDGATDAGASEDAATPPAAEGAS
Ga0334935_238409_228_401	3300034781	Biocrust	MADTDPVTAPDTDPAYAQGDQDAEPTMTAPSGPRPDAASHPDASDEYADKPDAEGDS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077156

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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