Metagenome Family F077373

Basic Information
Family ID	F077373
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	60 residues
Representative Sequence	FEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Number of Associated Samples	84
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.56 %
% of genes from short scaffolds (< 2000 bps)	2.56 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (96.581 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (31.624 % of family members)
Environment Ontology (ENVO)	Unclassified (29.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.829 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.32% β-sheet: 12.66% Coil/Unstructured: 62.03%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04389	Peptidase_M28	15.38
PF01833	TIG	4.27
PF07311	Dodecin	4.27
PF14378	PAP2_3	3.42
PF00990	GGDEF	2.56
PF00072	Response_reg	1.71
PF00196	GerE	1.71
PF15780	ASH	1.71
PF02073	Peptidase_M29	1.71
PF01764	Lipase_3	1.71
PF09339	HTH_IclR	1.71
PF00126	HTH_1	1.71
PF13277	YmdB	0.85
PF14240	YHYH	0.85
PF08445	FR47	0.85
PF00700	Flagellin_C	0.85
PF00027	cNMP_binding	0.85
PF08327	AHSA1	0.85
PF01740	STAS	0.85
PF00563	EAL	0.85
PF02537	CRCB	0.85
PF13692	Glyco_trans_1_4	0.85
PF14312	FG-GAP_2	0.85
PF02896	PEP-utilizers_C	0.85
PF08240	ADH_N	0.85
PF03466	LysR_substrate	0.85
PF03807	F420_oxidored	0.85
PF02515	CoA_transf_3	0.85
PF00669	Flagellin_N	0.85
PF03734	YkuD	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	4.27
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	1.71
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	1.71
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.85
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.85
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.85
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.85
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.85
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.85

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
All Organisms	root	All Organisms	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
cellular organisms	root	All Organisms → cellular organisms	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.85 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005435\|Ga0070714_102437321	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005437\|Ga0070710_11525295	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005602\|Ga0070762_10000033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	38473	Open in IMG/M
3300025929\|Ga0207664_11577880	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.47%
Aquatic	Environmental → Aquatic	14.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.28%
Peat	Environmental → Terrestrial → Peat	34.19%
Freshwater	Environmental → Aquatic → Freshwater	11.97%
Sediment	Environmental → Aquatic → Sediment	2.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	34.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.79%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Clay	Environmental → Terrestrial → Soil → Clay	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	34.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	31.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26342J46808_10205762	3300003220	Bog Forest Soil	QIAGSLRPEAFEEPLRSGIATKGETVLRKLLERGNVPTQIKITSAGITEVGTDRRSRPCSV*
Ga0062384_1000894863	3300004082	Bog Forest Soil	RSGIASKGESVLRALLARGNVPTRIKITSAGITEVGTDRRSRPCSI*
Ga0062384_1007903711	3300004082	Bog Forest Soil	IESKGESVLRKLLERGNVPTRIKITSGGITEVGVDRKSRPFSF*
Ga0062387_1009163841	3300004091	Bog Forest Soil	SGIETKGESVLVKLLERGNVPTRIKITSAGITEVGIDRRARPCMV*
Ga0062389_1000445691	3300004092	Bog Forest Soil	QIADALSPDMLDEPLRSAIVTKGESVLRRLLEQSNVPIRIKITSAGITEVGIDHRSRPCLL*
Ga0062389_1019941881	3300004092	Bog Forest Soil	YRWKVQHGRAEQHVYVQIAGQLKAEAFDEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV*
Ga0062389_1034968382	3300004092	Bog Forest Soil	IESKGESVLVKLLERGNVPTRIKITSAGITEVGADRRSRPCSV*
Ga0062388_1001408892	3300004635	Bog Forest Soil	MYRWKVQHGRAEQHVYVQIAGSLKAEAFDEPLRSSIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV*
Ga0070714_1024373212	3300005435	Agricultural Soil	RSAIESKGESVLRKLIERGNVPTRIKITSGGITEVGVDRRSHPCSF*
Ga0070713_1016652822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GAFSDPLRSAIETKGESVLLRLLERANVPTRIKITSAGLTEVGIDRRARPCEL*
Ga0070710_110525031	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ESIAEPLRSEVESKGESVLRRLLDAGDVPIRIKITSAGVTKVGIDRRSHPCEL*
Ga0070710_115252952	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VEEPLRSAIESKGESVLRKLIERGNVPTRIKITSGGITEVGVDRRSHPCSF*
Ga0066670_104713611	3300005560	Soil	DSLCPDSCAEPVRSGIESKGESVLRTLLERGSVPARIKITSAGITQTGVDRRSRPFFP*
Ga0070762_1000003313	3300005602	Soil	MYRWKVLNDRAEQHVYVQIASSLRAEAFDEPLRSGIQSKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV*
Ga0070764_101050401	3300005712	Soil	EQHVYVQIASSLRPEAFDEPLRSGIESKGRSVLIKLLERGNVPTRIKITSAGITEVGIDRCSRPCSV*
Ga0075030_1002635622	3300006162	Watersheds	VQIAASLRADAVEEPIRSGVETKGESVLLKLLARGTVPTRIKITSAGITEVGVDRCSRPVLV*
Ga0075030_1014290301	3300006162	Watersheds	VDEPLRSAIVSKGESVLRRLLEQNDVPIRIKITSAGITEVGIDHRSRPCAL*
Ga0075021_105770031	3300006354	Watersheds	YVQIARSLRAEAFEEPLRSGIETKGESVLLKLLERGNVPTRIKITSAGITEVGVDRRSRACVL*
Ga0066793_106521981	3300009029	Prmafrost Soil	MFRWKVQNGPAEQHVYVQIADSLRPEACQEPLRSGIESKGESVLRKLLERGTVPTRIKITSGGITEVGVDRRSRPFFESAPPPPPRR*
Ga0116218_12493601	3300009522	Peatlands Soil	RSGIESKGESVLRRLLERGDVPTRIKITSGGITEVGVDRRSRPCSF*
Ga0116220_100068894	3300009525	Peatlands Soil	RSGVESKGESVLLKLLERGDVPVRIKITSAGITEVGMDRHARPCQV*
Ga0116215_10277774	3300009672	Peatlands Soil	PLRPETVDEPLRSSIESKGESVLRKLLERGNVPARIKITSGGITEVGVDQRAQPVSM*
Ga0116224_102856432	3300009683	Peatlands Soil	SKGESVLLKLLERGDVPVRIKITSAGITEVGMDQRARPCVL*
Ga0116224_104940502	3300009683	Peatlands Soil	AEQHVYVQIAASLRAEACDEPLRTSIESKGESVLRTLLERGNVPTRIKITSGGITEVGVDRRARPCVL*
Ga0116216_107189071	3300009698	Peatlands Soil	HMYVQIANSLRPEAFEEPLRSGIETKGGSVLIKLLERGNVPTRIKITSDGITEVGVDHRSRVCSM*
Ga0136449_1000730877	3300010379	Peatlands Soil	GESVLVKLLERGDVPVRIKITSAGITEVGMDRHARPCQV*
Ga0136449_1007473591	3300010379	Peatlands Soil	WKVQNGRAEQHVYVQIAGSLRAERFEEPLRSGIESKGESVLRKLLERGSVPTRIKITSAGITEVGTDRRSRPCSV*
Ga0136449_1008222363	3300010379	Peatlands Soil	SSIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV*
Ga0136449_1036213661	3300010379	Peatlands Soil	WKVQNGEAEQHVYVQIAGALSPESVQEPLRTDIESKGEAVLRKLLDRGRVPIRIKITSAGITEVGIDHRSHPCTF*
Ga0137413_112596481	3300012924	Vadose Zone Soil	KHVYVQIAGSLRAEEFEDPLRSGIESKGESVLLRLLERGNVPTRIKITSAGITEIGIDRRQRACAL*
Ga0164305_113298881	3300012989	Soil	SLRPESFEEPLRSGIESKGESVLRKLLERGDVPVRIKITSGGITEVGVDRRSRPCSL*
Ga0181521_102299252	3300014158	Bog	GSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPYSV*
Ga0181523_103851282	3300014165	Bog	MYRWKVQYGRAEQHVYVQIAGSLRPEAFDEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV*
Ga0182016_105438732	3300014493	Bog	RADAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDSRSRPCSV*
Ga0182024_1000226025	3300014501	Permafrost	MYRWKVQYGRAEQHVYVQIAGSLKPEAFDEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV*
Ga0182024_107370782	3300014501	Permafrost	VQIADALSPDGVDEPLRSAIETKGESVLRRLLEQSNVPIRIKITSAGITEVGIDHRTRPCRL*
Ga0181525_107362621	3300014654	Bog	SGIASKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV*
Ga0181516_104463392	3300014655	Bog	GIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDSRSRPCSV*
Ga0187821_103179842	3300017936	Freshwater Sediment	SKGESVLLKLLERGNVPVRIKITSAGITEVGVDRRSRPCLV
Ga0187772_108775072	3300018085	Tropical Peatland	IESKGESVLVRLLERGDVPVRIKITSAGITEVGVDRRARPCVL
Ga0187769_100728861	3300018086	Tropical Peatland	LRSGIESKGESVLVRLLERGDVPVRIKITSAGITEVGVDRRARPCVL
Ga0187770_115730432	3300018090	Tropical Peatland	LRSGIESKGESVLVRLLERGDVPVRIKITSAGITEVGMDRRARPCVL
Ga0210395_109814771	3300020582	Soil	HVYVQIAGSLRPERFDEPLRSGIESKGRSVLVKLLARGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0208717_10365401	3300025574	Arctic Peat Soil	KVQHGRAEKHVYVQIADALNAEKFDEPLRSGIATKGESVLVKLLERGNVPTRIKITSAGIIEVGVDRRPRACSI
Ga0209638_11215111	3300025725	Arctic Peat Soil	MYRWKVQNGRAELHVYVQIAGSLRPEAFDEPLRSGIESKGESVLVKLLERGSVPTRIKITSGGITEVGTDRRSRPCSV
Ga0207664_115778801	3300025929	Agricultural Soil	YVQIADALRPDAVEEPLRSAIESKGESVLRKLIERGNVPTRIKITSGGITEVGVDRRSHPCSF
Ga0209418_11050441	3300027371	Forest Soil	PESVEEPLSSEVRSKGEAVLRRLLEAGDVPVRIKITSAGVTKVGIDRRSHPCQL
Ga0209419_10541651	3300027537	Forest Soil	EQHVYVQIADALTAESVDEPLRSEIESKGESVLRKLLDCGDVPVRIKITSAGVTKVGIDRRSHPCLL
Ga0208982_10721831	3300027574	Forest Soil	LSPDAFEEPLRSGIATKGESVLVKLLERGNVPTRIKITSAGITEVGIDRCPRACSV
Ga0209220_11441292	3300027587	Forest Soil	AEAFEDPLRSGIETKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSL
Ga0208324_11943802	3300027604	Peatlands Soil	LGIESKGESVLRRLLERGDVPTRIKITSGGITEVGVDRRSRPCSF
Ga0208827_11266941	3300027641	Peatlands Soil	AEQHVYVQIADSLSPEVVQEPLRSGIETKGESVLRKLLERGSVPTRIKITSAGITEVGVDRRSRPCSI
Ga0209530_11874122	3300027692	Forest Soil	QHVYVQIASSLRADAFDEPLRSGIESKGESVLVKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0208696_11655592	3300027696	Peatlands Soil	DSLKPEAFDEPLRSSIESKGESVLRKLLERGDVPTRIKITSAGITEVGIDRRSRPCSM
Ga0208696_12539531	3300027696	Peatlands Soil	RAEACDEPLRTSIESKGESVLRTLLERGNVPTRIKITSGGITEVGVDRRARPCVL
Ga0209656_102669931	3300027812	Bog Forest Soil	EPLRSGIESKGESILRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0209169_104156342	3300027879	Soil	EAFDEPLRSGIESKGRSVLIKLLERGNVPTRIKITSAGITEVGIDRCSRPCSV
Ga0209275_100009072	3300027884	Soil	MYRWKVLNDRAEQHVYVQIASSLRAEAFDEPLRSGIQSKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0209380_108645081	3300027889	Soil	RSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGADRRSRPCSI
Ga0209006_107294802	3300027908	Forest Soil	PLRSSIASKGESVLRRLLERGDVPTRIKITSAGITEVGTDRRARPCSV
Ga0209526_106221761	3300028047	Forest Soil	LEACEEPLRSGIESKGESVLLKLLERGRVPTRIKITSGGITEVGVDRRSRPFS
Ga0137415_112538262	3300028536	Vadose Zone Soil	KPLRSGIESKGESVLRKLLERGNVPTRIKITSGGITEVGVDRRPRPCSF
Ga0302231_101188662	3300028775	Palsa	EQHVYVQIAGSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSI
Ga0302231_103641452	3300028775	Palsa	VQIAGSLKAESFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302231_103846892	3300028775	Palsa	TYRWKVRDGRAEKHVYVQIADYLSAESFEEPLRSGIASKGESVLRALLARGSVPTRIKITSAGITEVGTDRRSRPCSI
Ga0302223_100853441	3300028781	Palsa	AGSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSI
Ga0302235_102091131	3300028877	Palsa	QHGRAEKHVYVQIADLLSPECFEEPLRSGIASKGESVLRALLQRGNVPTRIKITSAGITEVGTDRRARPCSI
Ga0302235_103984731	3300028877	Palsa	DYLSAESFEEPLRSGIASKGESVLRALLARGNVPTRIKITSAGITEVGTDRRSRPCSI
Ga0311358_104688371	3300029915	Bog	IASSLRADAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDSRSRPCSV
Ga0311340_111024581	3300029943	Palsa	KGESVLVKLLERGNVPTRIKITSAGITEVGADRRSRPCSI
Ga0311352_109650131	3300029944	Palsa	DAFEEPLRSGIESKGESVLRRLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0311371_115348401	3300029951	Palsa	VMNNRAEQHVYVQIASSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0311371_120933812	3300029951	Palsa	IADYLSAESFEEPLRSGIASKGESVLRALLARGNVPTRIKITSAGITEVGTDRRSRPCSI
Ga0311338_1001207310	3300030007	Palsa	MNNRAEQHVYVQIASSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0311338_101469201	3300030007	Palsa	PECFEEPLRSGIASKGESVLRALLQRGNVPTRIKITSAGITEVGTDRRARPCSI
Ga0311338_108925902	3300030007	Palsa	MYRWKVLNNRAEQHVYVQIASSLRADAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0311338_116466851	3300030007	Palsa	MYRWKVQYGRAEQHVYVQIAGSLKPEAFDEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0311353_100919654	3300030399	Palsa	AEKHVYVQIADYLSAESFEEPLRSGIASKGESVLRALLARGSVPTRIKITSAGITEVGTDRRSRPCSI
Ga0302184_102880522	3300030490	Palsa	DLLTPEAFDEPLRSGIASKGESVLRLLLQRGNVPTRIKITSAGITEVGTDHRARPCSI
Ga0311370_120967052	3300030503	Palsa	MYRWKVLNNRAEQHVYVQIASSLRADAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRS
Ga0311357_107503671	3300030524	Palsa	FEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0311357_107795191	3300030524	Palsa	VQHGRAEKHVYVQIADLLSPECFEEPLRSGIASKGESVLRALLQRGNVPTRIKITSAGITEVGTDRRARPCSI
Ga0311357_111736771	3300030524	Palsa	HVYVQIADYLSAESFEEPLRSGIASKGESVLRALLARGNVPTRIKITSAGITEVGTDRRSRPCSI
Ga0311355_104148981	3300030580	Palsa	LYRWKVLNGRAEQHVYVQIASSLNADAFEEPLRSGIESKGESVLVKLLERGNVPTRIKITSAGITEVGADRRSRPCSI
Ga0311355_113793342	3300030580	Palsa	LYRWKVQNGRAEQHVYVQIAGSLRADAFEEPLRSGIESKGESVLRRLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0311354_100828834	3300030618	Palsa	AFDEPLRSGIESKGETVLLKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0311354_102643022	3300030618	Palsa	MYRWKVMNNRAEQHVYVQIASSLRAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGVDRRSRPCSV
Ga0311345_109654851	3300030688	Bog	IETKGESVLLKLLERGNVPTRIKITSAGITEVGVDRCSRPVLV
Ga0310038_102278512	3300030707	Peatlands Soil	QHVYVQIAQSLSPEVVEEPLRSGIESKGESVLRKLLERGNVPARIKITSAGITEVGVDRRSRPCAI
Ga0302314_103830022	3300030906	Palsa	MYRWKVQYGRAEQHVYVQIAGSLKAESFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302180_105542652	3300031028	Palsa	VQNGRAEQHVYVQIAGSLRADAFEEPLRSGIESKGESVLRRLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302325_125291942	3300031234	Palsa	WKVQNGRAEQHVYVQIASALKAEAFEEPLRSGIETKGESVLRKLLERGNVPTQIKITSAGITEVGTDRRSRPCSV
Ga0302325_131670421	3300031234	Palsa	EPLRSGIESKGETVLLKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302325_131924182	3300031234	Palsa	YVQIARSLKAEAFDEPLRSGIESKGETVLLKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302324_1010733033	3300031236	Palsa	KHVYVQIADYLSAESFEEPLRSGIASKGESVLRALLARGNVPTRIKITSAGITEVGTDRRSRPCSI
Ga0302324_1011922251	3300031236	Palsa	GRAEKHVYVQIADYLTAESFEEPLRSSIASKGESVLRRLLERGDVPTRIKITSAGITEVGTDRRARPCSV
Ga0302324_1025274962	3300031236	Palsa	RSGIATKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0302324_1034036091	3300031236	Palsa	LRSGIESKGESVLVKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0302320_110376011	3300031524	Bog	SSLRADAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDSRSRPCSV
Ga0302326_118681211	3300031525	Palsa	MYRWKVQYGRAEQHVYVQIAGALKAEAFDEPLRSSIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302326_121229432	3300031525	Palsa	MYRWKVQYGRAEQHVYVQIAGSLKAEAFDEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302326_135032111	3300031525	Palsa	QYGHAEQHVYVQIARSLKAEAFEEPLRSGIESKGETVLLKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0302326_136951501	3300031525	Palsa	YVQIAGSLRAEAFEEPLRSGIATKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0307373_106747551	3300031672	Soil	VYVQIADALRPETVDEPLRSSIETKGESVLRRLLERGDVPCRIKITSGGITEVGVDQRAQPVSL
Ga0310686_1096517761	3300031708	Soil	RWKVQNGSAEQHVYVQIAQSLRPEGVQEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGIDRRSRPCSV
Ga0310686_1100014491	3300031708	Soil	HVYVQIASSLKAEAFEEPLRSGIESKGESVLRKLLERGNVPTRIKITSAGITEVGTDRRSRPCSV
Ga0310686_1126592201	3300031708	Soil	SVLRRLLERGDVPTRIKITSAGITEVGTDRRARPCSV
Ga0307474_103121891	3300031718	Hardwood Forest Soil	AFEDPLRSAIETKGESVLLRLLDRGNVPTRIKVTSAGLTEVGVDRRARPCEL
Ga0307477_109632892	3300031753	Hardwood Forest Soil	PLRSGIETKGESVLRKLLERGNVPTRIKITSGGITEVGVDRQSRPCSL
Ga0311301_101142001	3300032160	Peatlands Soil	EEPLRSGIESKGESVLRMLLERGDVPTRIKITSGGITEVGVDRRSRPCSF
Ga0311301_105710251	3300032160	Peatlands Soil	SLIAERFEEPLRSGIESKGESVLRKLLERGSVPTRIKITSAGITEVGTDRRSRPCSV
Ga0335085_115600991	3300032770	Soil	SKGESVLLKLLAHHSVPVRIKITSAGVTEIGVDRRSRPVVL
Ga0335069_104804603	3300032893	Soil	RWKVQNRTAEQHVYVQIADTLQPEESQEPLRSAIESKGESVLLKLLAHHSVPVRIKITSAGVTEIGVDRRSRPVVL
Ga0335072_114977682	3300032898	Soil	TAEQHVYVQIADALEPEKAQEPLRSAIESKGESVLRQLLAHRDVPVRIKITSAGVTEVGVDRRSRPVML
Ga0335076_106861911	3300032955	Soil	HVYVQIADTLHPEESQEPLRSAIESKGESVLLKLLAHHSVPVRIKITSAGITEVGVDRRSRPVLL
Ga0335073_116139451	3300033134	Soil	GTAEQHVYVQIADALQPEQAQEPLRSAIESKGESVLLKLLAHRDVPVRIKITSAGVTEVGVDRRARPVLL
Ga0370515_0354285_3_185	3300034163	Untreated Peat Soil	IADYLSAESFEEPLRSGIASKGESVLRALLARGSVPTRIKITSAGITEVGTDRRSRPCSI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077373

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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