Metagenome / Metatranscriptome Family F077419

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077419
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	72 residues
Representative Sequence	MQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE
Number of Associated Samples	79
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.34 %
% of genes near scaffold ends (potentially truncated)	23.93 %
% of genes from short scaffolds (< 2000 bps)	74.36 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.359 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.863 % of family members)
Environment Ontology (ENVO)	Unclassified (48.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.829 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF04366	Ysc84	32.48
PF05170	AsmA	3.42
PF01740	STAS	1.71
PF13441	Gly-zipper_YMGG	1.71
PF13320	DUF4091	0.85
PF01548	DEDD_Tnp_IS110	0.85
PF04226	Transgly_assoc	0.85
PF13188	PAS_8	0.85
PF07676	PD40	0.85
PF03705	CheR_N	0.85
PF01546	Peptidase_M20	0.85
PF01553	Acyltransferase	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	32.48
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	3.42
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.71
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.36 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.54 %
Unclassified	root	N/A	25.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	24.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	24.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.56 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111019\|2221140671	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101745647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300003505\|JGIcombinedJ51221_10031306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1940	Open in IMG/M
3300004479\|Ga0062595_102266147	Not Available	534	Open in IMG/M
3300005434\|Ga0070709_10791960	Not Available	743	Open in IMG/M
3300005437\|Ga0070710_10011914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4307	Open in IMG/M
3300005439\|Ga0070711_100157658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300005536\|Ga0070697_101409124	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300005764\|Ga0066903_102301979	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005921\|Ga0070766_10211165	All Organisms → cellular organisms → Bacteria → Acidobacteria	1217	Open in IMG/M
3300006050\|Ga0075028_100015547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3250	Open in IMG/M
3300006050\|Ga0075028_100662456	Not Available	625	Open in IMG/M
3300006052\|Ga0075029_100112243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1647	Open in IMG/M
3300006052\|Ga0075029_100264937	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300006052\|Ga0075029_100961523	Not Available	588	Open in IMG/M
3300006052\|Ga0075029_101024428	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006059\|Ga0075017_100658285	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300006059\|Ga0075017_101132293	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006237\|Ga0097621_101019658	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006854\|Ga0075425_100595063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1272	Open in IMG/M
3300010154\|Ga0127503_10446673	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300010376\|Ga0126381_100488448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1734	Open in IMG/M
3300010379\|Ga0136449_103970705	Not Available	553	Open in IMG/M
3300011120\|Ga0150983_10602411	Not Available	859	Open in IMG/M
3300011120\|Ga0150983_11770078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3784	Open in IMG/M
3300011120\|Ga0150983_14589616	Not Available	522	Open in IMG/M
3300011120\|Ga0150983_14699604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1961	Open in IMG/M
3300012202\|Ga0137363_10122982	All Organisms → cellular organisms → Bacteria → Acidobacteria	2005	Open in IMG/M
3300017932\|Ga0187814_10191845	Not Available	767	Open in IMG/M
3300017936\|Ga0187821_10040239	Not Available	1664	Open in IMG/M
3300017955\|Ga0187817_10075717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2099	Open in IMG/M
3300017955\|Ga0187817_10277690	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300020140\|Ga0179590_1096115	Not Available	796	Open in IMG/M
3300020579\|Ga0210407_10000030	All Organisms → cellular organisms → Bacteria	209274	Open in IMG/M
3300020579\|Ga0210407_10016961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5399	Open in IMG/M
3300020579\|Ga0210407_10949869	Not Available	657	Open in IMG/M
3300020579\|Ga0210407_11142827	Not Available	588	Open in IMG/M
3300020580\|Ga0210403_10003805	All Organisms → cellular organisms → Bacteria	13147	Open in IMG/M
3300020580\|Ga0210403_10313290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300020580\|Ga0210403_10474655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300020580\|Ga0210403_10542932	Not Available	942	Open in IMG/M
3300020580\|Ga0210403_10736809	Not Available	787	Open in IMG/M
3300020580\|Ga0210403_10800176	Not Available	749	Open in IMG/M
3300020581\|Ga0210399_10010143	All Organisms → cellular organisms → Bacteria	7368	Open in IMG/M
3300020581\|Ga0210399_10045391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3523	Open in IMG/M
3300020581\|Ga0210399_10114921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2208	Open in IMG/M
3300020581\|Ga0210399_10266827	All Organisms → cellular organisms → Bacteria → Acidobacteria	1428	Open in IMG/M
3300020581\|Ga0210399_10440147	Not Available	1086	Open in IMG/M
3300020583\|Ga0210401_10180361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1967	Open in IMG/M
3300020583\|Ga0210401_10313220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300021088\|Ga0210404_10227070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300021168\|Ga0210406_10008620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10198	Open in IMG/M
3300021168\|Ga0210406_10080207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2793	Open in IMG/M
3300021171\|Ga0210405_10012071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7236	Open in IMG/M
3300021171\|Ga0210405_10058848	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300021171\|Ga0210405_10255109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300021180\|Ga0210396_10135496	All Organisms → cellular organisms → Bacteria → Acidobacteria	2217	Open in IMG/M
3300021180\|Ga0210396_11242487	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300021181\|Ga0210388_10500233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1067	Open in IMG/M
3300021401\|Ga0210393_11371205	Not Available	565	Open in IMG/M
3300021403\|Ga0210397_11044389	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300021405\|Ga0210387_10314480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1379	Open in IMG/M
3300021405\|Ga0210387_10367185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1273	Open in IMG/M
3300021405\|Ga0210387_11325146	Not Available	621	Open in IMG/M
3300021406\|Ga0210386_11815286	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300021407\|Ga0210383_10355872	Not Available	1262	Open in IMG/M
3300021432\|Ga0210384_11385645	Not Available	608	Open in IMG/M
3300021433\|Ga0210391_10299681	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300021474\|Ga0210390_10122620	All Organisms → cellular organisms → Bacteria → Acidobacteria	2178	Open in IMG/M
3300021478\|Ga0210402_10096893	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300021478\|Ga0210402_10547804	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300021479\|Ga0210410_10000156	All Organisms → cellular organisms → Bacteria	101887	Open in IMG/M
3300021559\|Ga0210409_10087800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2874	Open in IMG/M
3300022507\|Ga0222729_1060047	Not Available	543	Open in IMG/M
3300022530\|Ga0242658_1001407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2733	Open in IMG/M
3300022533\|Ga0242662_10263352	Not Available	564	Open in IMG/M
3300022533\|Ga0242662_10351448	Not Available	503	Open in IMG/M
3300022726\|Ga0242654_10050095	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300022726\|Ga0242654_10221529	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300024179\|Ga0247695_1009321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300024179\|Ga0247695_1012745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1182	Open in IMG/M
3300024222\|Ga0247691_1000337	All Organisms → cellular organisms → Bacteria → Acidobacteria	10213	Open in IMG/M
3300026374\|Ga0257146_1042086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300026377\|Ga0257171_1018233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1175	Open in IMG/M
3300026551\|Ga0209648_10139957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1926	Open in IMG/M
3300027047\|Ga0208730_1012106	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300027104\|Ga0208095_1010576	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300027576\|Ga0209003_1118222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300027884\|Ga0209275_10083372	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300027898\|Ga0209067_10263274	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300028800\|Ga0265338_10176068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1635	Open in IMG/M
3300029636\|Ga0222749_10019217	All Organisms → cellular organisms → Bacteria → Acidobacteria	2814	Open in IMG/M
3300030844\|Ga0075377_11706141	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300030847\|Ga0075405_11627304	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300030945\|Ga0075373_11560436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1321	Open in IMG/M
3300030974\|Ga0075371_10698866	Not Available	603	Open in IMG/M
3300031057\|Ga0170834_104985813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2570	Open in IMG/M
3300031090\|Ga0265760_10382169	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031128\|Ga0170823_16248155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2933	Open in IMG/M
3300031231\|Ga0170824_104752246	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300031231\|Ga0170824_108071647	Not Available	581	Open in IMG/M
3300031231\|Ga0170824_114578288	Not Available	520	Open in IMG/M
3300031446\|Ga0170820_13331686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	987	Open in IMG/M
3300031446\|Ga0170820_17529524	Not Available	860	Open in IMG/M
3300031469\|Ga0170819_11271841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300031474\|Ga0170818_112785525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2462	Open in IMG/M
3300031474\|Ga0170818_112808251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	789	Open in IMG/M
3300031720\|Ga0307469_11893367	Not Available	577	Open in IMG/M
3300031720\|Ga0307469_12295497	Not Available	526	Open in IMG/M
3300031740\|Ga0307468_100898009	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031754\|Ga0307475_10041431	All Organisms → cellular organisms → Bacteria → Acidobacteria	3413	Open in IMG/M
3300031754\|Ga0307475_10054601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3012	Open in IMG/M
3300031962\|Ga0307479_11850531	Not Available	555	Open in IMG/M
3300032174\|Ga0307470_10056729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2039	Open in IMG/M
3300032205\|Ga0307472_100015831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3967	Open in IMG/M
3300032828\|Ga0335080_10594746	All Organisms → cellular organisms → Bacteria → Acidobacteria	1164	Open in IMG/M
3300032955\|Ga0335076_10630504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	954	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.47%
Aquatic	Environmental → Aquatic	11.97%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.47%
Sediment	Environmental → Aquatic → Sediment	7.69%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111019	Grass soil microbial communities from Rothamsted Park, UK - FP1 and FP2 (Mercury 0.2g/kg) assembled	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2221893028	2209111019	Grass Soil	MQDEAGVHQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
INPhiseqgaiiFebDRAFT_1017456471	3300000364	Soil	MQDEAGVDQKASDAELIALVRRAQEEFEAHSELNEVNLLLRDFARELLKQRLLERVEFVLLMEFSRPE*
JGIcombinedJ51221_100313062	3300003505	Forest Soil	MKVTAEVDHKVSDAELIALLRGAQEELEAHGELNQVNLLLRDFARELLKQRLQLRVRFVRLMKPSPPE*
Ga0062595_1022661471	3300004479	Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHSELNQVNLLLRDFARELLKQRLLEKVEYVLLMEFSRPE*
Ga0070709_107919602	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRDQVGVDQKISIAELIASVRKIQEEIARHGELNELNLLLCDFMIELLRQRLLLRVEFVQMMESSPPKSRAPVASGGSC*
Ga0070710_100119143	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQDEAGVDQKASDAELIALVRRAQEELEAHSELNEVNLLLRDFARELLKQRLLEKVEFVLLMEFSRPE*
Ga0070711_1001576581	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQEMVGVDQKFSYAELITLLRKMQEEIDANSELNEVNLLLRDFARELLKKRLLMKVQFVQMMELGRPGQSTRT*
Ga0070697_1014091242	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQDEAGVDQKASDAELMALVRRAQEELEAHSELNQVNLLLRDFARELLKQRVLEKVECVLLMEFSRPE*
Ga0066903_1023019792	3300005764	Tropical Forest Soil	MQDTAVVDPVVDRRASDAELILMLRKTQKEIDINGESNELNLLLHDFVRELLKQHLLRRVQFLRMM*
Ga0070766_102111651	3300005921	Soil	MKVTAEVDHKVSDAELIALLRGVQEELEAHGELNQVNLLLRDFARELLKQRLQLRVRFVRLMKPSPPE*
Ga0075028_1000155474	3300006050	Watersheds	MQEMVWFDQKVSDAELMILLRKAQEEIDAHRELNPVNLLLLDFARELLKKRLLRKVQFVEMMESSRPGQSTLT*
Ga0075028_1006624561	3300006050	Watersheds	MQDKAGVDHKASDAELISFVRKTQEEIEAHGELNELNLLLRDFARELLKQRLLMRVEFVRMLELVRLD*
Ga0075029_1001122433	3300006052	Watersheds	MQDEGGIDQRASDAELMALVRRAQEELEAHGESNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRWE*
Ga0075029_1002649371	3300006052	Watersheds	MQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE*
Ga0075029_1009615231	3300006052	Watersheds	NRGISEEAVMQDNAGVDQEVSDAELIALLGRAQEEIEAHGELNELNLLLRDFVRELLKQHLLLRVEFVRMMEFSRPE*
Ga0075029_1010244282	3300006052	Watersheds	MKDTAVVDHNASDAELFAIVSRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRIIELSRPE*
Ga0075017_1006582852	3300006059	Watersheds	MSVMQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE*
Ga0075017_1011322932	3300006059	Watersheds	MKDTAAVDHKATDAELMALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRIIELSRPE*
Ga0097621_1010196582	3300006237	Miscanthus Rhizosphere	MQDEAGVDQKASDAELIALVRRAQEELEAHSELNQVNLLLRDFARELLKQRLLEKVEFVLLMEFSRPE*
Ga0075425_1005950632	3300006854	Populus Rhizosphere	MQDEAGVDQKASDVELIALVHRAQEELEAHSELNQVNLLLRDFARELLKQRLLERVEFVLLMDFSRPE*
Ga0127503_104466731	3300010154	Soil	MYEVAVMQDESGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELS
Ga0126381_1004884483	3300010376	Tropical Forest Soil	MVQNRAGVGQKISDAELIALFCRTQEEIEGQGESNELNLLLRDFAKELLKQRLFTRVEFVRLLESRSETIVCGPPLVFKQ*
Ga0136449_1039707051	3300010379	Peatlands Soil	DRGMYEVAVMQDEAGVDQKASDAELIALVRRAQEELEAHDELNQLNLLLRDFARELLKQRLLERVESVLLMEFSRPE*
Ga0150983_106024111	3300011120	Forest Soil	MYEVAVMQDEAGVDQKASDADLIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELRPRE*
Ga0150983_117700784	3300011120	Forest Soil	MQEMVGVDQKASDAELMILLRRAREEIDAHAELNEVNLLLLDFVRELLKKRLLIRVQFVQMMELGRLGRSTRT*
Ga0150983_145896161	3300011120	Forest Soil	MKVTAEVDHKVSDAELIALLRGTQEELEAHGELNQVNLLLHDFARELLKQRLQLRVRFVRLVESSRLE*
Ga0150983_146996044	3300011120	Forest Soil	MQDKAGVDHKASDAELISFVRKTQEEIEAHGELNELNLLLRDFAKELLKHRLLIRVEFVRMIELVRPD*
Ga0137363_101229822	3300012202	Vadose Zone Soil	MVGVDQKASDAELMILLRRVQEEIDAHSEMNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGQSART*
Ga0187814_101918451	3300017932	Freshwater Sediment	EVAVMQHQAGVDQKASDAELIALLRKAQEEIEAHGELNELNVLLRDFARELLKQRLLLRVQFVRMMESSRPE
Ga0187821_100402392	3300017936	Freshwater Sediment	QHQAGVDQKASDAELIALLRKAQEEIEAHGELNELNVLLRDFAKELLKQRLLLRVQFVRMMESSRPE
Ga0187817_100757172	3300017955	Freshwater Sediment	VMQHQAGVDQNASDAELIALLRKAQEEIEAHGELNELNVLLRDFARELLKQRLLLRVQFVRMMESSRPE
Ga0187817_102776901	3300017955	Freshwater Sediment	ARLVPTTSARSGSCFCGPNRGMYEVAVMQDEAGVDQKASDAELIAVVRRAQEELEAHGELDQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE
Ga0179590_10961151	3300020140	Vadose Zone Soil	MQDKAGVDRKASDAELIALLRKVQEAIEAQGELNELNLLLQDFARELLKKRLLLRVQFVQIMELSRPG
Ga0210407_10000030156	3300020579	Soil	MQKMVGDDQKVSDAELMTLLRRTQEEIDAHSEMNEVNLLLRDFARELLKKRLLIRVQFALMMEVGQPGQSTRT
Ga0210407_100169613	3300020579	Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDEAGVDLQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0210407_109498691	3300020579	Soil	MRVTAEVDHKVSDAELIGLLRGTQEELEAHGELNQVNLLLHDFARELLKQRLQLRVRFVRLVESSRLE
Ga0210407_111428272	3300020579	Soil	MQKMAGVDQKASDVEVMTLLRRVQEEIDAHGELSEVNLLLRDFARELLKKRLLTRVQFVQVMQLGRPGQSTRI
Ga0210403_100038053	3300020580	Soil	MQDKAGVDHKASDAELISFVRKTQEEIEAHGELNELNLLLRDFAKELLKHRLLIRVEFVRMIELVRPD
Ga0210403_103132902	3300020580	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLKQHLLRRVEFVQMIELQRQEYRTSAYP
Ga0210403_104746551	3300020580	Soil	DPNQGMYEVAVMQDEAGVDLQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0210403_105429322	3300020580	Soil	MKVTAEVDHKVSDAELIALVRGAQEELEAHGELNLVNLLLRDFAMELLKQRLLLRVQFVRLMKSSRPE
Ga0210403_107368091	3300020580	Soil	IHCLKSAVTEVAVMKVTAEVDHKVSDAELIALVRGAQEELEAHGELNQANLLLRDFARELLKQRLLLRVQFVRLVELSRPE
Ga0210403_108001763	3300020580	Soil	VDVRWRQCRIRRVDQSVSDTELIVLLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIESHRQEYRTSADP
Ga0210399_100101434	3300020581	Soil	MQDKAGVDYKASDAELISLVRKTKEEIEAHGELNELNLLLLDFARELLKQRLLIRVEFVRMIELVRPD
Ga0210399_100453912	3300020581	Soil	MQDKAGVDHKASDAELISFVRKTQEEIEAHGELNELNLLVRDFAKELLKHRLLIRVEFVRMIELVRPD
Ga0210399_101149213	3300020581	Soil	MQGMVGVDQRASDAELMTLLRRAQEEIDAHAELNEVNLLLLDFARELLKKRLLIRVQFVQMMELGRLGRSTRT
Ga0210399_102668272	3300020581	Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDESGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0210399_104401471	3300020581	Soil	MQDEAVVDQKASDAELIALVRRAQEELEAHGELKQVSLLLRDFARERLKQRLLLRVEFVRMIELSRRE
Ga0210401_101803611	3300020583	Soil	IHCLKSAVTEVAVMKVTAEVDHKVSDAELIALLRGVQEELEAHGELNQVNLLLRDFVRELLKQRLLLRVRFVRLMKPSPPE
Ga0210401_103132202	3300020583	Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHSELNEVNLLLRDFARELLKQRLLEKVEFVLLMEFSRPE
Ga0210404_102270702	3300021088	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIELHRQEYRTSADP
Ga0210406_100086205	3300021168	Soil	MQKMAGVDQKASDAEVMTLLRRVQEEIDAHGELSEVNLLLRDFARELLKKRLLIRVQFVQVMQLGRPGQSTRT
Ga0210406_100802073	3300021168	Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHSELNQVNLLLRDFARELLKQRLLERVEFVLLMEFSRPE
Ga0210405_100120716	3300021171	Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE
Ga0210405_100588484	3300021171	Soil	MQEMVGVDQKASDAELMTLLRRVQEEIDAHAELNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGYSTRT
Ga0210405_102551091	3300021171	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIESHRQEYRTS
Ga0210396_101354964	3300021180	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIESHRQEYRTSADP
Ga0210396_112424872	3300021180	Soil	MYEVAVMQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE
Ga0210388_105002332	3300021181	Soil	MKVTAEVDHKVSDAELIALLRGVQEELEAHGELNQVNLLLRDFVRELLKQRLLLRVRFVRLMKPSPPE
Ga0210393_113712052	3300021401	Soil	MKVTAEVDHKVSDAELIALLRGAQEELEAHGELNQVNLLLRDFARELLKQRLQLRVRFVRLVALSRPE
Ga0210397_110443892	3300021403	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIESHRQEYRTSDYP
Ga0210387_103144802	3300021405	Soil	MKVTAEVDHKVSDAELIALLRGVQEELEAHGELNQVNLLLRDFARELLKQRLQLRVRFVRLMKPSPPE
Ga0210387_103671852	3300021405	Soil	MQEMVGVDQRASDAELMTLLRRAQEEIDAHAELNEVNLLLLDFVRELLKKRLLIRVQFVQMMELGRLGRSTRT
Ga0210387_113251461	3300021405	Soil	MKVTAEVDHKVSDAELIALVRGAQEELEAHGELNQANLLLRDFARELLKQRLLLRVQFVRLVELSRPE
Ga0210386_118152862	3300021406	Soil	MKVTAEVDHKVSDAELIALLRGAQEELEAHGELNQVNLLLRDFVRELLKQRLLLRVRFVRLMKPSPPE
Ga0210383_103558721	3300021407	Soil	VAVMQDEAVVDQKASDAELIALVRRAQEELEAHGELKQVSLLLRDFARERLKQRLLLRVEFVRMIELSRRE
Ga0210384_113856452	3300021432	Soil	EVAVMKVTAEVDHKVSDAELIALVRGAQEELEAHGELNQANLLLRDFARELLKQRLLLRVQFVRLVELSRPE
Ga0210391_102996811	3300021433	Soil	VDHKVSDAELIALLRGVQQELEAHGELNQVSLLLRDFVRELLKQRLLLRVRFVRLMKPSPTE
Ga0210390_101226202	3300021474	Soil	MRVTAEVDHKVSDAELIALLRGTQEGLEAHGELNQVNLLLHDFARELLKQRLQLRVRFVRLVESSRLE
Ga0210402_100968931	3300021478	Soil	SREMSEVAVMKDTAAVDYKASDSELIALLRGAQEELEAHGELNQANLLLRDFAKELLRKRLCLRVRFARLIELSRPA
Ga0210402_105478042	3300021478	Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDEAGVDLQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRQE
Ga0210410_100001561	3300021479	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIELHRQEYRTS
Ga0210409_100878002	3300021559	Soil	MQNNAGVGQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIELHRQEYRTSADP
Ga0222729_10600471	3300022507	Soil	NEEAAMQKMVGDDQKVSDAELMTLLRRTQEEIDAHSEMNEVNLLLRDFARELLKKRLLIRVQFALMMEVGQPGQSTRT
Ga0242658_10014072	3300022530	Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDEAGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0242662_102633522	3300022533	Soil	QNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLKQHLLRRVEFVQMIELQRQEYRTSAYP
Ga0242662_103514481	3300022533	Soil	VMCEVTVMQDKAGVDHKASDAELISFVRKTQEEIEAHGELNELNLLVRDFAKELLKHRLLIRVEFVRMIELVRPD
Ga0242654_100500952	3300022726	Soil	MQKMAGVDQKASDAEVMTLFRRVQEEIDAHGELSEVNLLLRDFARELLKKRLLIRVQFVQVMQLGRPGQSTRT
Ga0242654_102215292	3300022726	Soil	MQEMVGVDQRASDAELMTLLRRAQEEIDAHAELNEVNLLLLDFVRELLKKRLLIRVQFVQMMELGRSGQSTRT
Ga0247695_10093212	3300024179	Soil	MRDQAEVDQKTSVAELIALLRKIQEEIEAHGELNELNLLLRDFTLELLKQRLLRRVEFVQMMESSRPKSRISVASGTSC
Ga0247695_10127452	3300024179	Soil	MQEMVGVDQKASDAELMTFLRRMQEEIDAHAELNEVNLLLRDFARELLKKRLLMRVQFVQMMELGRPGSG
Ga0247691_10003376	3300024222	Soil	MRDQAEVDQKTSVAELIALLRKIQEEIEAHGELNELNLLLRDFTLELLKQRLLRRVEFVQMIESSRPKSRTSVASGTSC
Ga0257146_10420861	3300026374	Soil	DQKASDAELMTLLRRVQEEIDAHSEMNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGQSART
Ga0257171_10182332	3300026377	Soil	MQEMVGVDQKASDAELMTLLRRVQEEIDAHSEMNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGQSART
Ga0209648_101399572	3300026551	Grasslands Soil	MYEVAVMKDEAGVDQKASDAELIALVRGAQEELEAHGELNAVNLLLRDFARELLKQRLLLRVEFVRMIELSRRE
Ga0208730_10121061	3300027047	Forest Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIES
Ga0208095_10105761	3300027104	Forest Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDESGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRM
Ga0209003_11182221	3300027576	Forest Soil	QKASDAEVMTLLRRAQKEIDAHGELSEVNLLLRDFARELLKKRLLIRVQFVQVMQVGRAGQSTRT
Ga0209275_100833721	3300027884	Soil	MKVTAEVDHKVSDAELIALLRGAQEELEAHGELNQVNLLLRDFARELLKQRLQLRVRFVRLMKPSPPE
Ga0209067_102632741	3300027898	Watersheds	MQDEGGIDQRASDAELMALVRRAQEELEAHGESNQVNLLLRDFARELLKQRLLLRVEFVRMIELSRWE
Ga0265338_101760682	3300028800	Rhizosphere	MQDESEIDQRASDAELMVLVRRAQEELEAHGESNQVNLLLRDFARELLKQRLLLKVEFVRMIELSRRE
Ga0222749_100192174	3300029636	Soil	MQNNAGVDQSVSDAELIALLREAQEEMEVRGELNQLNLLLRDFAREQLRQHLLRRVEFVQMIELHRQEYRTSDYP
Ga0075377_117061411	3300030844	Soil	GVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0075405_116273042	3300030847	Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDEAGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFA
Ga0075373_115604362	3300030945	Soil	ASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0075371_106988662	3300030974	Soil	RATNEEAAMQGMVGIDQKASDAELMTLLRKAQEEIDAHGELNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGPIART
Ga0170834_1049858132	3300031057	Forest Soil	MQGMVGIDQKASDAELMTLLRKAQEEIDAGSELNEVNLLLRDFARELLKKRLLIRVQFVQMMESSRPGQSTRT
Ga0265760_103821692	3300031090	Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHDELNQLNLLLRDFARELLKQRLLERVEFVLLMEFSRPE
Ga0170823_162481552	3300031128	Forest Soil	MRDLAPKRQPVNSADPNQGMYEVAVMQDEAGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0170824_1047522462	3300031231	Forest Soil	MQEEMVGVDQKASDAELITLLRKVQEEIDAHSELNEVNLLLRDFARALLTKRLLMKVQFVQMMELGRPGQSTRT
Ga0170824_1080716471	3300031231	Forest Soil	MQETVGVDQKASDAELITLLRRAQEEIDAHGELNEVNLLLRDFARELLKKRLLIRVQFVQMMELGRPGQSART
Ga0170824_1145782882	3300031231	Forest Soil	LICVNRETYEVAAMQDKVGGDQKASDAELIALLRKVQGAIAAQGELNESNLLLQDFARELLKKRLLLRVEFVQIMESSRPG
Ga0170820_133316861	3300031446	Forest Soil	MLDKPVNDLKVSDAELIAFVRKAQEEIEAHGELNALNLLLCDFATELLKQRLLLRVQFVRIS
Ga0170820_175295241	3300031446	Forest Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHGELNQMNLLLRDFARELLKQRLLERVEFVLLMEFSRPE
Ga0170819_112718411	3300031469	Forest Soil	AGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0170818_1127855252	3300031474	Forest Soil	MRDLGPQPQSVNSADPNQGMYEVAVMQDEAGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRMIELSRRE
Ga0170818_1128082511	3300031474	Forest Soil	MLDKPDNDLKVSDAELIAFVRKAQEEIEAHGELNALNLLLCDFATELLKQRLLLRVQFVRIS
Ga0307469_118933672	3300031720	Hardwood Forest Soil	SDAELMTLLRRAQEEIDAHAELNEVNLLLLDFARELLKKRLLIRVQFVQMMELGRPGQSTRT
Ga0307469_122954971	3300031720	Hardwood Forest Soil	MQDEAGVDQKASDAELIALVRRAQEELEARGELNQMNLLLRDFARELLKQRLLERVEFVLLMEFSRPE
Ga0307468_1008980092	3300031740	Hardwood Forest Soil	MQEMVGVDQKASDAELMTLLRRAQEEIDAHAELNEVNLLLLDFARELLKKRLLIRVQFVQMMELGRPGQSTRT
Ga0307475_100414312	3300031754	Hardwood Forest Soil	MQETVGIDQKVSDAELITLLRSAQEEIHAHSELNEVNLLLRDFARELLKKRLLIRVQFVQMMELSRPGQSART
Ga0307475_100546012	3300031754	Hardwood Forest Soil	MQDEAGVDQKASDAELIALVRRAQEELEAHGELNQVNLLLRDFARELLKRRLLLRVEFVRMIELSRRE
Ga0307479_118505311	3300031962	Hardwood Forest Soil	MQGKAGVDQKASDAELIALLCKTQAEIDVHGELNELNLLLHDFARELLKQRLQLRVRFVRLVESSRLE
Ga0307470_100567293	3300032174	Hardwood Forest Soil	MQEMAGVDQKASDAEVMTLLRRVQEEIDAHGELSEVNLLLRDFARELLKKRLLIRVQFVQVMQLGRPGQSTRT
Ga0307472_1000158311	3300032205	Hardwood Forest Soil	MRDLAPQPQSVNSADPNQGMYEVAVMQDEAGVDQQASDAELIALVRRAQEELEAHGELNQVSLLLRDFARGLLKQRLLLRVEFVRKRTHYRKGGADSQS
Ga0335080_105947462	3300032828	Soil	MQDEGGIDQRASDAELMALVRRAQEELEAHGESNQVNLLLRDFARELLKQRLLIRVEFVRMIELSRCE
Ga0335076_106305042	3300032955	Soil	MKDTAAVDHKATDAELMALVRRAQEELQAHGELNQVNLLLRDFARELLKQRLLRRVEFVRMIELSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077419

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences