Metagenome / Metatranscriptome Family F077539

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077539
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	107 residues
Representative Sequence	MTKMSAVLRIKAELALVEASRKLLSQHASVRTSPETRAYADTATVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF
Number of Associated Samples	82
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.54 %
% of genes near scaffold ends (potentially truncated)	31.62 %
% of genes from short scaffolds (< 2000 bps)	73.50 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.120 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.205 % of family members)
Environment Ontology (ENVO)	Unclassified (35.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.795 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.50% β-sheet: 0.00% Coil/Unstructured: 36.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
e.18.1.0: automated matches	d6qgra_	6qgr	0.77367
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.77098
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d2cj4a_	2cj4	0.76855
a.29.6.0: automated matches	d1xg2b1	1xg2	0.7661
e.18.1.0: automated matches	d6zk94_	6zk9	0.72462

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00144	Beta-lactamase	5.13
PF00583	Acetyltransf_1	4.27
PF02126	PTE	4.27
PF08447	PAS_3	4.27
PF00072	Response_reg	2.56
PF01381	HTH_3	2.56
PF00892	EamA	1.71
PF12833	HTH_18	1.71
PF03544	TonB_C	1.71
PF07676	PD40	1.71
PF07519	Tannase	1.71
PF00196	GerE	0.85
PF13432	TPR_16	0.85
PF13376	OmdA	0.85
PF13493	DUF4118	0.85
PF00440	TetR_N	0.85
PF13759	2OG-FeII_Oxy_5	0.85
PF01627	Hpt	0.85
PF13305	TetR_C_33	0.85
PF13280	WYL	0.85
PF07715	Plug	0.85
PF04389	Peptidase_M28	0.85
PF12146	Hydrolase_4	0.85
PF07494	Reg_prop	0.85
PF13640	2OG-FeII_Oxy_3	0.85
PF01053	Cys_Met_Meta_PP	0.85
PF02517	Rce1-like	0.85
PF07638	Sigma70_ECF	0.85
PF12704	MacB_PCD	0.85
PF07730	HisKA_3	0.85
PF02146	SIR2	0.85
PF07690	MFS_1	0.85
PF13442	Cytochrome_CBB3	0.85
PF00132	Hexapep	0.85
PF03807	F420_oxidored	0.85
PF03918	CcmH	0.85
PF00561	Abhydrolase_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	5.13
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	5.13
COG2367	Beta-lactamase class A	Defense mechanisms [V]	5.13
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	4.27
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.71
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.85
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.85
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.85
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.85
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.85
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.85
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.85
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.85
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.85
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.85
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.85
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.85
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.85
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.85
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.85
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.56 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.56 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.56 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.85 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.85 %
Xanthomonas citri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group	0.85 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
unclassified Massilia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia	0.85 %
Xanthomonas citri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	0.85 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.71 %
Massilia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp.	0.85 %
Xanthomonas citri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	0.85 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1005783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1516	Open in IMG/M
3300001546\|JGI12659J15293_10058557	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300001593\|JGI12635J15846_10021551	All Organisms → cellular organisms → Bacteria	5282	Open in IMG/M
3300001867\|JGI12627J18819_10003809	All Organisms → cellular organisms → Bacteria → Proteobacteria	5625	Open in IMG/M
3300001867\|JGI12627J18819_10321125	Not Available	625	Open in IMG/M
3300002245\|JGIcombinedJ26739_100141174	All Organisms → cellular organisms → Bacteria	2276	Open in IMG/M
3300002245\|JGIcombinedJ26739_100222096	Not Available	1781	Open in IMG/M
3300004080\|Ga0062385_10040682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1942	Open in IMG/M
3300004080\|Ga0062385_10615851	Not Available	688	Open in IMG/M
3300004080\|Ga0062385_10754104	Not Available	632	Open in IMG/M
3300004092\|Ga0062389_104023972	Not Available	552	Open in IMG/M
3300005591\|Ga0070761_10120072	Not Available	1525	Open in IMG/M
3300005602\|Ga0070762_10004725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6571	Open in IMG/M
3300005602\|Ga0070762_10080471	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005602\|Ga0070762_10210436	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300005610\|Ga0070763_10090619	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005712\|Ga0070764_10261713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300005944\|Ga0066788_10025020	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300005950\|Ga0066787_10008021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1644	Open in IMG/M
3300005952\|Ga0080026_10148550	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005952\|Ga0080026_10210693	Not Available	578	Open in IMG/M
3300005994\|Ga0066789_10005177	All Organisms → cellular organisms → Bacteria → Proteobacteria	5744	Open in IMG/M
3300006059\|Ga0075017_100907752	Not Available	684	Open in IMG/M
3300006176\|Ga0070765_100335133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300006176\|Ga0070765_101988712	Not Available	544	Open in IMG/M
3300009662\|Ga0105856_1254610	Not Available	572	Open in IMG/M
3300010865\|Ga0126346_1399383	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300010869\|Ga0126359_1258922	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300012683\|Ga0137398_10863593	Not Available	632	Open in IMG/M
3300012929\|Ga0137404_10383555	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300014501\|Ga0182024_10158175	All Organisms → cellular organisms → Bacteria → Proteobacteria	3169	Open in IMG/M
3300015206\|Ga0167644_1018606	All Organisms → cellular organisms → Bacteria → Proteobacteria	3118	Open in IMG/M
3300020021\|Ga0193726_1000009	All Organisms → cellular organisms → Bacteria → Proteobacteria	744665	Open in IMG/M
3300020021\|Ga0193726_1001086	All Organisms → cellular organisms → Bacteria → Proteobacteria	23154	Open in IMG/M
3300020021\|Ga0193726_1110793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300020034\|Ga0193753_10001343	All Organisms → cellular organisms → Bacteria → Proteobacteria	21222	Open in IMG/M
3300020034\|Ga0193753_10110804	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300020061\|Ga0193716_1079254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1457	Open in IMG/M
3300020061\|Ga0193716_1204051	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300020580\|Ga0210403_10241186	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300020580\|Ga0210403_10436236	Not Available	1068	Open in IMG/M
3300020581\|Ga0210399_10042981	All Organisms → cellular organisms → Bacteria	3622	Open in IMG/M
3300020582\|Ga0210395_10689391	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300021168\|Ga0210406_10761490	Not Available	740	Open in IMG/M
3300021171\|Ga0210405_10137186	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1935	Open in IMG/M
3300021180\|Ga0210396_10316576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1380	Open in IMG/M
3300021180\|Ga0210396_10885472	Not Available	762	Open in IMG/M
3300021180\|Ga0210396_11317006	Not Available	600	Open in IMG/M
3300021180\|Ga0210396_11675113	Not Available	517	Open in IMG/M
3300021181\|Ga0210388_10109126	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300021404\|Ga0210389_10012023	All Organisms → cellular organisms → Bacteria → Proteobacteria	6666	Open in IMG/M
3300021404\|Ga0210389_10150099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300021404\|Ga0210389_10193348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1586	Open in IMG/M
3300021404\|Ga0210389_10622861	Not Available	847	Open in IMG/M
3300021404\|Ga0210389_10651031	Not Available	827	Open in IMG/M
3300021405\|Ga0210387_10003405	All Organisms → cellular organisms → Bacteria → Proteobacteria	12208	Open in IMG/M
3300021405\|Ga0210387_10004813	All Organisms → cellular organisms → Bacteria → Proteobacteria	10345	Open in IMG/M
3300021405\|Ga0210387_11286961	Not Available	632	Open in IMG/M
3300021406\|Ga0210386_10214884	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300021407\|Ga0210383_10820689	Not Available	795	Open in IMG/M
3300021407\|Ga0210383_11567402	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021420\|Ga0210394_10003851	All Organisms → cellular organisms → Bacteria → Proteobacteria	18160	Open in IMG/M
3300021420\|Ga0210394_10787102	Not Available	831	Open in IMG/M
3300021433\|Ga0210391_11199440	Not Available	587	Open in IMG/M
3300021474\|Ga0210390_10374327	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300021475\|Ga0210392_10013270	All Organisms → cellular organisms → Bacteria → Proteobacteria	4490	Open in IMG/M
3300021475\|Ga0210392_10068068	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300021477\|Ga0210398_10701397	Not Available	819	Open in IMG/M
3300021478\|Ga0210402_10003395	All Organisms → cellular organisms → Bacteria	14968	Open in IMG/M
3300021479\|Ga0210410_10697533	Not Available	897	Open in IMG/M
3300025627\|Ga0208220_1186311	Not Available	512	Open in IMG/M
3300025633\|Ga0208480_1010585	All Organisms → cellular organisms → Bacteria → Proteobacteria	2967	Open in IMG/M
3300025633\|Ga0208480_1029206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp.	1569	Open in IMG/M
3300026215\|Ga0209849_1017697	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026291\|Ga0209890_10023593	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300026911\|Ga0209620_1008709	Not Available	828	Open in IMG/M
3300027117\|Ga0209732_1016204	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1256	Open in IMG/M
3300027370\|Ga0209010_1095916	Not Available	506	Open in IMG/M
3300027496\|Ga0208987_1040628	Not Available	827	Open in IMG/M
3300027496\|Ga0208987_1096562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300027528\|Ga0208985_1056119	Not Available	762	Open in IMG/M
3300027559\|Ga0209222_1004160	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300027559\|Ga0209222_1055167	Not Available	764	Open in IMG/M
3300027567\|Ga0209115_1000790	All Organisms → cellular organisms → Bacteria → Proteobacteria	5054	Open in IMG/M
3300027609\|Ga0209221_1001542	All Organisms → cellular organisms → Bacteria	5931	Open in IMG/M
3300027692\|Ga0209530_1050072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300027737\|Ga0209038_10108435	Not Available	839	Open in IMG/M
3300028016\|Ga0265354_1000613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6018	Open in IMG/M
3300028747\|Ga0302219_10155284	Not Available	877	Open in IMG/M
3300028759\|Ga0302224_10256795	Not Available	698	Open in IMG/M
3300028906\|Ga0308309_10323639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300030053\|Ga0302177_10531769	Not Available	605	Open in IMG/M
3300030399\|Ga0311353_10432477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300030646\|Ga0302316_10244615	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300030737\|Ga0302310_10134812	Not Available	1497	Open in IMG/M
3300030741\|Ga0265459_13365861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas citri group → Xanthomonas citri	560	Open in IMG/M
3300030743\|Ga0265461_10288178	Not Available	1133	Open in IMG/M
3300030814\|Ga0265741_110687	Not Available	642	Open in IMG/M
3300030815\|Ga0265746_1007728	Not Available	1153	Open in IMG/M
3300030878\|Ga0265770_1001202	All Organisms → cellular organisms → Bacteria	3589	Open in IMG/M
3300030906\|Ga0302314_10621211	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300030940\|Ga0265740_1023857	Not Available	646	Open in IMG/M
3300030977\|Ga0265721_1006055	Not Available	652	Open in IMG/M
3300031018\|Ga0265773_1019279	Not Available	660	Open in IMG/M
3300031057\|Ga0170834_103027894	Not Available	516	Open in IMG/M
3300031057\|Ga0170834_105134031	Not Available	1034	Open in IMG/M
3300031128\|Ga0170823_12773837	Not Available	539	Open in IMG/M
3300031128\|Ga0170823_17310757	Not Available	552	Open in IMG/M
3300031231\|Ga0170824_109885992	Not Available	626	Open in IMG/M
3300031231\|Ga0170824_112591200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3079	Open in IMG/M
3300031231\|Ga0170824_122071819	Not Available	1103	Open in IMG/M
3300031708\|Ga0310686_102782554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8552	Open in IMG/M
3300031708\|Ga0310686_115720480	Not Available	1039	Open in IMG/M
3300031708\|Ga0310686_118061845	All Organisms → cellular organisms → Bacteria → Proteobacteria	4756	Open in IMG/M
3300031715\|Ga0307476_10209324	Not Available	1417	Open in IMG/M
3300031718\|Ga0307474_10013105	All Organisms → cellular organisms → Bacteria	6004	Open in IMG/M
3300031718\|Ga0307474_10014864	All Organisms → cellular organisms → Bacteria → Proteobacteria	5629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.02%
Aquatic	Environmental → Aquatic	5.13%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.03%
Peat	Environmental → Terrestrial → Peat	5.98%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Sediment	Environmental → Aquatic → Sediment	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.27%
Loam	Environmental → Terrestrial → Soil → Loam	23.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.27%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030977	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10057832	3300001166	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVEILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL*
JGI12659J15293_100585571	3300001546	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQXASIRAAPETRXYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL*
JGI12635J15846_100215514	3300001593	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVXILADDTSEKHWNVAARVAKCADYLAQIPSREVXDARLHMIAAHKVLQDVEEITL*
JGI12627J18819_100038095	3300001867	Forest Soil	MTTMSPVLRIKAELFLTAASKRLLAQRTESAQAVARPHADTVTVIRKELDKLVQILADDTSEKHFNVAARVAKCADYLAQIPAAPVADARDFMVAAHKVLQDVQEITL*
JGI12627J18819_103211252	3300001867	Forest Soil	MTTMSPVLRIKAELFLTAASKKLLAQHAEPGAQTVARPQADTVTVIRKELDKLVEILADDTSEKHFNVAARVAKCADYLAQIPAASVSDARYFMVAAHKVLQDVEEITL*
JGIcombinedJ26739_1001411743	3300002245	Forest Soil	MTKMSAVLRIKAELALVEASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVXDARLDMIAAHKVLXDVQEITF*
JGIcombinedJ26739_1002220962	3300002245	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQNASIRAAPETRAYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL*
Ga0062385_100406824	3300004080	Bog Forest Soil	MSAVLRIKAELALTEASRTLFSQQASLWASPETRGYADTASVVRKELDKLVDILADDASEKHWKVAARVAKCADYLARIPSREVQDALLDMIAAHKVLQDVQEFTF*
Ga0062385_106158511	3300004080	Bog Forest Soil	MTKMSPVLRIKAELFLSAASKKLVTRPAQPSPTMAAKAHADTVTVIRKELDKLVEILADDGSDKHFNVSARVAKCADYLAQIPNASVSDARYFMVAAHKVLQDVEEIAL*
Ga0062385_107541041	3300004080	Bog Forest Soil	LRLTGFMTKMSAVLRIKAELALTEASGKLLGQRGSLYTSQETRRYADTVSVVRKELDKLVAILADDTSEKHWNVAARVAKCADYLAQIPNPEVQEARFDMIAAHKILQDVEEITF*
Ga0062389_1040239721	3300004092	Bog Forest Soil	MTKMSAVLRIKAELALTEASGKLLGQRGSLYTSQETRRYADTVSVVRKELDKLVAILADDTSEKHWNVAARVAKCADYLAQIPNPEVQEARFDMIAAHKILQDVEEITF*
Ga0070761_101200723	3300005591	Soil	MTKMSAVLRIKAELALTEASRTLFSQQASLWASPETRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLGMIAAHKVLQDVEEITF*
Ga0070762_100047252	3300005602	Soil	MTKMSAVLRIKAELALAQASRKLTSQNASIRAAPETRAYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREIQDARLDMIAAHKVLQDVEEITL*
Ga0070762_100804711	3300005602	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEIT
Ga0070762_102104362	3300005602	Soil	LTGNMTKMSAVLRIKAELALVEASRKLFGEHASLCTSPETRGYAGTASVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLKDVQEITF*
Ga0070763_100906192	3300005610	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEITI*
Ga0070764_102617131	3300005712	Soil	MNKMSAVLRIKAELALVAASRKLLSQHPSVRTSPETKAYADTTTVVHKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHKVLQDVEEITF*
Ga0066788_100250202	3300005944	Soil	MTKMSAVLRIKAELALVEASRKLLSQHASVRTSSETRNHADTASVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL*
Ga0066787_100080211	3300005950	Soil	MNTMSAVLRIKAELSLVEATRKLLGQRASLLTSPETKGYADTASVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEVT
Ga0080026_101485502	3300005952	Permafrost Soil	MTKMSAVLRIKAELALTEASRKLFSQQAALWASPETRDYADTAAVVRKELDKLVEILANDASEKHWNVAARVAKCADYLAQIPSREVQAARLDMVAAHKVLQDVEDISL*
Ga0080026_102106931	3300005952	Permafrost Soil	NYFKDLSGPLRLTGYMTKMSAVLRIKAELALTEASKTLFSHQASLWASPVTRAYADTASVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF*
Ga0066789_100051778	3300005994	Soil	MNQMSAVLRIKAELALREASRTLRSQHASLYSSSEIRRYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCSDYLVQIPNREVQGARLDMIAAHKVLLDVEEITF*
Ga0075017_1009077522	3300006059	Watersheds	MMKKMSPVLRIKAELALTEASGKLLGQRASLYASDETRCQADTVSVVRKELDKLVGILADETSEKHWNVAARVAKCADYLAQIPNAEVQDARLDMIEAHKVLQ
Ga0070765_1003351333	3300006176	Soil	MTKMSAVLRIKAELALVEASRKLLSQHASVRTSPETRAYADTATVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF*
Ga0070765_1019887122	3300006176	Soil	MNKMSAVLRIKAELALVAASRKLLSQHASVRTSPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREIQDARLDMIAAHKVLQDVEEITL*
Ga0105856_12546102	3300009662	Permafrost Soil	MTKMSAVLRIKAELALTEASKTLFSHQASLWASPVTRAYADTASVVRKELDKLVDILADNASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF*
Ga0126346_13993831	3300010865	Boreal Forest Soil	SAVLRIKAELALTEASKTLFSQQASLWASPVTKAYADTASVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF*
Ga0126359_12589222	3300010869	Boreal Forest Soil	RIKAELALTEASKTLFSQQASLWASPVTKAYADTASVVRKELDKLVDILADDGSEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF*
Ga0137398_108635932	3300012683	Vadose Zone Soil	MNRLSAVLRIKAELALREASRTLLSQHASLRASRESRGYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSPEVQGARLDMIAAH
Ga0137404_103835551	3300012929	Vadose Zone Soil	PANYIKELWGHVALTGQMNRLSAVLRIKAELALREASRTLLSQHASLRASRESRGYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSPEVQGARLDMIAAHKVLQDVEEITF*
Ga0182024_101581752	3300014501	Permafrost	MTKMSAVLRIKAELALVEASRTLRSQHASLCASPESRRYADTATVVRKELDKLVDILGDDTSEKHWNVAARVAKCADYLAQIPSREVQEARLDMIAAHKVLQDVEEITF*
Ga0167644_10186061	3300015206	Glacier Forefield Soil	MNKMSAVLRIKAELALVEASRKLLSQHASVRTLPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLAMISAHKVLQDVEEITF*
Ga0193726_1000009559	3300020021	Soil	MNKMSAVLRIKAELALVEASKKLLGQHASVRIEPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHKVLQDVEEITF
Ga0193726_100108614	3300020021	Soil	MTKMSAVLRIKAELALTEASKTLFSQQASLWASPATRAYADTASVVRKELDKLVDILADDASEKHWNVAARVAKCADYLVQIPNREVQCARLDMVAAHKVLQDVEEITL
Ga0193726_11107931	3300020021	Soil	VALTAEMSQMSAVLRIKAELTLREASRTLLSQHASLRASAETRGYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSHEVQGARL
Ga0193753_1000134315	3300020034	Soil	MRTTSKIFWGRLRLNGAMTKMSAVLRIKAELALKEASKTLLSHRASLWASPDTGAYGDTASVVRKELDKLVDILADDASEKHWKVAARVAKCADYLAPIPSPEVQDARLDMIAAHKVLQDVEEITF
Ga0193753_101108041	3300020034	Soil	MSQMSAVLRIKAELALREASRTLLSQLASLRASPETRDYADTAAVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITL
Ga0193716_10792542	3300020061	Soil	MNQMSAVLRIKAELALREASRTLLSQRSSLRVSPETRGYADTATVVRKELDKLVDILADDASEKHGNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITL
Ga0193716_12040512	3300020061	Soil	MTKMSAVLRIKAELALKEASKTLLSHRASLWASPDTGAYGDTASVVRKELDKLVDILADDASEKHWKVAARVAKCADYLAPIPSPEVQDARLDMIAAHKVLQDVEEITF
Ga0210403_102411862	3300020580	Soil	MAKMSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0210403_104362362	3300020580	Soil	MSAVLRIKAELALREASRTLLSQHASLSASPETRRYADTAAVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSRDVEGARLDMIAAHKVLVDVQEFTF
Ga0210399_100429814	3300020581	Soil	VSPTHAGLNPANYIKNLSGRLWLTGKMNRMSAVLRIKAELALRQASRTLLSQHASVCTSPETRGHAGTASVVRQELDKLVGILADDTSEKHGNVAARLAKCADYLAQIPSPEVQDARLDMIAAHKVLQDVEEITL
Ga0210395_106893911	3300020582	Soil	LGLTSGMNQMSAVLRIKAELALVEASRKLLSQHASLRTSPETRDYADTVSVVRKELDKLVGILGDDASEKHWNVAARVAKCADYLAQIPNSEVQDARLDMIAAHKVLQDVQEITF
Ga0210406_107614901	3300021168	Soil	MSAVLRIKAELALTEASRTLFSQQASLLASPETRGYADTASVVRKELDKLVNILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHQVLQ
Ga0210405_101371863	3300021171	Soil	MAKMSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARWI
Ga0210396_103165762	3300021180	Soil	MSNMSAVLRIKAELALAEASKKLLSQRASVRTAPETRNYADTVSVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEITI
Ga0210396_108854722	3300021180	Soil	MAKMSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQITSREVQDARLDMIAAHKVLQDVQEITF
Ga0210396_113170062	3300021180	Soil	MTKMSAVLRIKAELALAQASRKLTSQNASIRAAPETRAYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREIQDARLDMIAAHKVLQDVEEITL
Ga0210396_116751131	3300021180	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEITI
Ga0210388_101091262	3300021181	Soil	MSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0210389_100120233	3300021404	Soil	MSKMSAVLRIKAELALAEASRKLLSQRASARTSPETSTYADTTSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQNARLDMIAAHKVLQDVQEITF
Ga0210389_101500992	3300021404	Soil	MSTMSPVLRIKAELFLTAASKKLLAQRAETAQTVARPQADTVTVIRKELDKLVQILADDTSEKHFNVAARVAKCADYLAQIPAAPVSDAREFMVAAHKVLQDVQEITL
Ga0210389_101933482	3300021404	Soil	MSNMSAVLRIKAELALAEASKKLLSQRASVRTAPETRNYADTVSVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSGEVQDARLDMI
Ga0210389_106228611	3300021404	Soil	SAVLRIKAELALREASRTLLSQHASLSASPETRRYADTAAVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSRDVEGARLDMIAAHKVLVDVQEFTF
Ga0210389_106510312	3300021404	Soil	MTKMSAVLRIKAELALAQASRKLTSQNASIRAAPETRAYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREIQDARLDMIAAHKVLQDVE
Ga0210387_100034058	3300021405	Soil	MTKMSAVLRIKAELALVEASRKLLSQHASVRTSPETRAYADTATVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF
Ga0210387_1000481311	3300021405	Soil	MNKMSAVLRIKAELALVAASRKLLSQHASVRTSPETKAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHRVLQDVEEITF
Ga0210387_112869611	3300021405	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIA
Ga0210386_102148842	3300021406	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEITI
Ga0210383_108206892	3300021407	Soil	MTKMSAVLRIKAELALVEASRKLFGEHASLCTSPETRGYAGTASVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKV
Ga0210383_115674022	3300021407	Soil	MNQMSAVLRIKAELALVEASRKLLSQHASLRTSPETRDYADTVSVVRKELDKLVGILGDDASEKHWNVAARVAKCADYLAQIPNSEVQDARLDMIAAHKVLQDVQEI
Ga0210394_1000385116	3300021420	Soil	MAKMSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF
Ga0210394_107871021	3300021420	Soil	MTKMSAVLRIKAELALVEASRKLFGEHASLCTSPETRGYAGTASVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQD
Ga0210391_111994401	3300021433	Soil	KLLSQHASIRTSPETRDYANTASVVRKELDKLVVILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF
Ga0210390_103743272	3300021474	Soil	MSAVLRIKAELALAEASRKLLSLHASIRTSPETRDYANTASVVRKELDKLVAILGDDASEKHWNVAARIAKCADYLAQIPSREVQDARHDMIAAHKVLQDVEEITF
Ga0210392_100132704	3300021475	Soil	MTKMSAVLRIKAELALTEASKVLFSQQASLWASPETRGYADTASVVRKELDKLVTILADDESDKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF
Ga0210392_100680683	3300021475	Soil	MNKMSAVLRIKAELALVAASRKLLSQHASVRTSPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQNARLDMISAHKVLQDVEEITF
Ga0210398_107013972	3300021477	Soil	MSKMSAVLRIKAELALAEASKKLLSQRASVRTSPETRNYADTVSVVRKELDKLVGIHADDASEKHWNVAARVAKCADYLAQIPSGEVQDARLDMIAAHKVLQDVEEITI
Ga0210402_100033952	3300021478	Soil	MNRMSAVLRIKAELALREASRTLLSQHASLSASPETRRYADTAAVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSRDVEGARLDMIAAHKVLVDVQEFTF
Ga0210410_106975331	3300021479	Soil	MTKMSAVLRIKAELALVEASRKLFGEHASLCTSPETRGYAGTASVVRKELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLKDVQEITF
Ga0208220_11863111	3300025627	Arctic Peat Soil	MTKMSAVLRIKAELALAEASRKLLSQHASVRTSPETRAYADTTTVVRKELDKLVSILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMVAAHKVLQDVEEITI
Ga0208480_10105853	3300025633	Arctic Peat Soil	MSKMSAVLRIKAELALAEASRKLLSQHASARTSPETRAYADTTSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSAEVQDARLDMIAAHKVLQDVEEITL
Ga0208480_10292062	3300025633	Arctic Peat Soil	NLDGLEISGYMTKMSAVLRIKAELALAEASRKLLSQHASVRTSPETRAYADTTTVVRKELDKLVSILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMVAAHKVLQDVEEITI
Ga0209849_10176972	3300026215	Soil	TKMSAVLRIKAELALVEASRKLLSQHASVRTSSETRNHADTASVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0209890_100235932	3300026291	Soil	MNQMSAVLRIKAELALREASRTLRSQHASLYSSSEIRRYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCSDYLVQIPNREVQGARLDMIAAHKVLLDVEEITF
Ga0209620_10087092	3300026911	Forest Soil	MTTMSPVLRIKAELFLTAASKRLLAQRTESAQAVARPHADTVTVIRKELDKLVQILADDTSEKHFNVAARVAKCADYLAQIPAAPVADARDFMVAAHKVLQDVQEITL
Ga0209732_10162043	3300027117	Forest Soil	MSAVLRIKAELALVEASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0209010_10959161	3300027370	Forest Soil	VLRIKAELALREASRTLLSHHPSLFSSPETKGYADTASVVRKELDKLVNILADDASEKHRNVAARVAKCADYLALIPSREVQGARLDMIAAHKVLQDVQEITF
Ga0208987_10406281	3300027496	Forest Soil	MSAVLRIKAELALVEASRKLLSQQASIRTSPETRAYADTTSVVRKELDKLVEILADDASEKHWNVAARVAKCSDYLAQIPSREVQDARLVMIAVHQVLQV
Ga0208987_10965622	3300027496	Forest Soil	LALVEASKKLLDQHASVRIAPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHKVLQDVEEITF
Ga0208985_10561192	3300027528	Forest Soil	MNKMSAVLRIKAELALVEASRKLFGQHASVRVSPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHKVLQDVEEITF
Ga0209222_10041602	3300027559	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0209222_10551671	3300027559	Forest Soil	TCNMTKMSAVLRIKAELALVEASRKLTSQHASIRAAAETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0209115_10007905	3300027567	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQNASIRAAPETRAYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0209221_10015423	3300027609	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVEILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0209530_10500722	3300027692	Forest Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLHMIAAHKVLQDVEEITL
Ga0209038_101084351	3300027737	Bog Forest Soil	MTKMSPVLRIKAELFLSAASKKLVTRPAQPSPTMAAKAHADTVTVIRKELDKLVEILADDGSDKHFNVSARVAKCADYLAQIPNASVSDARYFMVAAHKVLQDVEEIAL
Ga0265354_10006131	3300028016	Rhizosphere	LTGHMTKMSAVLRIKAELALVEASRKLLSQRAAVCTSPETRNYADTVSVVRKELDKLVGILADDTSEKHWNVAARVSKCADYLAQIPSREVQDARLDM
Ga0302219_101552841	3300028747	Palsa	WRHCGIPTNNALSRSGLTGFMTKMSAVLRIKAELALAGASRKLVRQQQPTRTTPETRSYTDTASVVHRELDKLVDILADDESEKHWNVAARVAKCADYLAQIPSPEVQDARRDMIAAHKVLQDVEEITF
Ga0302224_102567951	3300028759	Palsa	MTKMSAVLRIKAELALTEASRTLFSQQASLWASPQTRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQ
Ga0308309_103236393	3300028906	Soil	MAKMSAVLRIKAELALAEASRKLLSQHASIRTSPETRDYANTASVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITF
Ga0302177_105317691	3300030053	Palsa	MTKMSAVLRIKAELALAGASRKLVRQQQPTRTTPETRSYTDTASVVHRELDKLVDILADDESEKHWNVAARVAKCADYLAQIPSPEVQDARRDMIAAHKVLQDVEEITF
Ga0311353_104324772	3300030399	Palsa	MTKMSAVLRIKAELALTEASRTLFSQQASLWASPQTRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF
Ga0302316_102446151	3300030646	Palsa	VLRIKAELALTEASRTLFSQQASLWASPQTRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF
Ga0302310_101348123	3300030737	Palsa	MTKMSAVLRIKAELALTEASRTLFSQQASLWASPQTRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHK
Ga0265459_133658612	3300030741	Soil	ASRRLVSQHASVRTSPETRAYADTTSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPNPEVQNARLDMIAAHRVLQDVEEITL
Ga0265461_102881782	3300030743	Soil	MTKMSAVLRIKAELALVEASRRLVSQHASVRTSPETRAYADTTSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPNPEVQNARLDMIAAHRVLQDVEEITL
Ga0265741_1106871	3300030814	Soil	MTKMSAVLRIKAELALVEASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREIQDARLDMIAA
Ga0265746_10077281	3300030815	Soil	MTKMSAVLRIKAELALVEASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMVAAHKVLQDVEEITI
Ga0265770_10012022	3300030878	Soil	MTKMSAVLRIKAELALVEASRKLLSQRAAVCTSPETRNYADTVSVVRKELDKLVGILADDTSEKHWNVAARVSKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0302314_106212111	3300030906	Palsa	ALTEASRTLFSQQASLWASPQTRAYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSREVQGARLDMIAAHKVLQDVEEITF
Ga0265740_10238571	3300030940	Soil	MTKMSAVLRIKAELALAQASRKLTSQHASIRAAPETRGYADTASVIRRELDKLVGILADDTSEKHWNVAARVSKCADYLAQIPSREVQDARLDMIAAHKVLQDVEEITL
Ga0265721_10060551	3300030977	Soil	RNMTQMSAVLRIKAELALAEASRKLLLGHASVRTSPETRGYADTASVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0265773_10192792	3300031018	Soil	MTKMSAVLRIKAELALVEASKKLLSRHVSVCTSPETRKYADTVSVVRKELVKLVGILADDTSERHWNVAARVAKCADYLAQIPSREIQDARLDMIAAHKVLQDVEEITL
Ga0170834_1030278941	3300031057	Forest Soil	GHEALTGYMNRLSAVLRIKAELALREASRTLLSQHASLRASPESRGYADTATVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSRDVQDARLEMIAAHKVLQDVEEITF
Ga0170834_1051340312	3300031057	Forest Soil	MTKMSAVLRIKAELSLTEASRTLFSQQASLCASSETSAFADTASVVRKELDKLVGILADDASEKHWNVAARIAKCADYLAQIPSREVQDARLDMIAAHKVLQE
Ga0170823_127738371	3300031128	Forest Soil	MTKMSAVLRIKAELSLTEASRTLFSQQASLCASSETSAFADTASVVRKELDKLVGILADDASEKHWNVAARIAKCADYLAQIPSREVQNARLDMIAAHKVLQD
Ga0170823_173107571	3300031128	Forest Soil	MNQLSAVLRIKAELALREASRTLLSQHASLRASPESRGYADTATVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSRDVQDARLEMIAAHKVLQDVEEITF
Ga0170824_1098859922	3300031231	Forest Soil	MTTMSPVLRIKAELFLTAASKKLLAQRAEAAQTVARPQADTVTVIRKELDKLVQILADDTSEKHFNVAARVAKCADYLAQIPAAPVSDAREFMVAAHKVLQDVQEITL
Ga0170824_1125912005	3300031231	Forest Soil	MNQLSAVLRIKAELALREASRTLLSQHASLRASPESRGYADTATVVRKELDKLVDILADDASEKHWNVTARVAKCADYLAQIPSPEVQAARLDMIAAHKVLQDVEEITL
Ga0170824_1220718192	3300031231	Forest Soil	MTKMSAVLRIKAELSLTEASRTLFSQQASLCASSETSAFADTASVVRKELDKLVGILADDASEKHWNVAARIAKCADYLAQIPSREVQDARLVMISAHKVLQDVEEITF
Ga0310686_1027825548	3300031708	Soil	MRGPNPANCIKDLWGRLRLNANMNRMSAVLRIKAELALREASRTLLSQHASLHSSPETRRYADTASVVRKELDKLVDILADDASEKHWNVAARVAKCADYLAQIPSEDVQDARLDMIAAHKVLQDVQEITF
Ga0310686_1157204802	3300031708	Soil	LTGNMTKMSAVLRIKAELALVEASRKLLSQHASIRTVPETRGYADTASVVRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHRVLQDVEEITL
Ga0310686_1180618452	3300031708	Soil	MTKMSAVLRIKAELALVEASRKLLRQPASVYTSPETRKYADTVSVVRKELVKLVGILADDTSERHWNVAARVAKCADYLAHIPSREVQDALLDMIKAHKVLQDVEEITF
Ga0307476_102093243	3300031715	Hardwood Forest Soil	MSKMSAVLRIKAELALVQASKKLLSQRASVRKSPETRAYADTTSVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0307474_100131054	3300031718	Hardwood Forest Soil	MSKMSAVLRIKAELALVEASRKLTSQHVSIRAAPETRGYADTASVVRRELDKLVGILADDTSEKHWNVAARVAKCADYLAQIPSREVQDARLDMIAAHKVLQDVQEITF
Ga0307474_100148645	3300031718	Hardwood Forest Soil	MNKMSAVLRIKAELALVAASRKLLSQHASVRTSPETRAYADTTTVVRKELDKLVGILADDASEKHWNVAARVAKCADYLAQIPSREVQDARLDMISAHKVLQDVEEITF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences