Metagenome Family F077574

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077574
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	72 residues
Representative Sequence	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSHTNPNIGDTIPLR
Number of Associated Samples	69
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.57 %
% of genes near scaffold ends (potentially truncated)	26.50 %
% of genes from short scaffolds (< 2000 bps)	81.20 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.752 % of family members)
Environment Ontology (ENVO)	Unclassified (49.573 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.650 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.74% β-sheet: 35.62% Coil/Unstructured: 61.64%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00528	BPD_transp_1	17.09
PF01156	IU_nuc_hydro	15.38
PF02952	Fucose_iso_C	7.69
PF01261	AP_endonuc_2	6.84
PF01180	DHO_dh	0.85
PF13407	Peripla_BP_4	0.85
PF00440	TetR_N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	15.38
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	7.69
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.85
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.85
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.85
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.85
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.38 %
Unclassified	root	N/A	7.69 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.53 %
Unclassified	root	N/A	7.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Unclassified	root	N/A	7.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.71 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Unclassified	root	N/A	7.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.71 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.71 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Unclassified	root	N/A	7.69 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1.71 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.71 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Unclassified	root	N/A	7.69 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.71 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.85 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.85 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	22.22 %
Unclassified	root	N/A	7.69 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.71 %
Flavobacteriales bacterium 32-34-25	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium 32-34-25	0.85 %
Streptosporangium subroseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	0.85 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.85 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12897444	All Organisms → cellular organisms → Bacteria → Terrabacteria group	828	Open in IMG/M
3300000789\|JGI1027J11758_12899921	All Organisms → cellular organisms → Bacteria → Terrabacteria group	838	Open in IMG/M
3300000789\|JGI1027J11758_12902667	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300002245\|JGIcombinedJ26739_100367136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1320	Open in IMG/M
3300004152\|Ga0062386_101217633	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004633\|Ga0066395_10806401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300005332\|Ga0066388_102609257	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005332\|Ga0066388_102691409	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005332\|Ga0066388_106759582	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005467\|Ga0070706_100627849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	998	Open in IMG/M
3300005467\|Ga0070706_101513407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	613	Open in IMG/M
3300005764\|Ga0066903_101426599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1302	Open in IMG/M
3300005764\|Ga0066903_102025209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1106	Open in IMG/M
3300005764\|Ga0066903_107698288	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005764\|Ga0066903_108231203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	533	Open in IMG/M
3300006175\|Ga0070712_101492253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	591	Open in IMG/M
3300006175\|Ga0070712_101690767	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009792\|Ga0126374_10753831	All Organisms → cellular organisms → Bacteria → Terrabacteria group	738	Open in IMG/M
3300009792\|Ga0126374_11887986	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010043\|Ga0126380_11012579	Not Available	701	Open in IMG/M
3300010046\|Ga0126384_11452747	Not Available	641	Open in IMG/M
3300010046\|Ga0126384_12184697	Not Available	532	Open in IMG/M
3300010048\|Ga0126373_10056215	All Organisms → cellular organisms → Bacteria	3513	Open in IMG/M
3300010048\|Ga0126373_10127811	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300010048\|Ga0126373_11137797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300010360\|Ga0126372_10551876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300010360\|Ga0126372_10958190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	864	Open in IMG/M
3300010361\|Ga0126378_10436631	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300010366\|Ga0126379_10557131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1226	Open in IMG/M
3300010366\|Ga0126379_11395222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300010376\|Ga0126381_100265689	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300010376\|Ga0126381_100382771	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300012202\|Ga0137363_10005356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	7909	Open in IMG/M
3300012205\|Ga0137362_11187366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	647	Open in IMG/M
3300012210\|Ga0137378_10281599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1547	Open in IMG/M
3300012361\|Ga0137360_10167962	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300012361\|Ga0137360_10496682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1038	Open in IMG/M
3300012923\|Ga0137359_10248548	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300012929\|Ga0137404_11703507	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300012961\|Ga0164302_10744085	Not Available	732	Open in IMG/M
3300012971\|Ga0126369_11272918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300016270\|Ga0182036_10135502	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300016294\|Ga0182041_10009065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	5598	Open in IMG/M
3300016319\|Ga0182033_10438634	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300016341\|Ga0182035_10708610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	877	Open in IMG/M
3300016341\|Ga0182035_11684393	Not Available	573	Open in IMG/M
3300016341\|Ga0182035_11898310	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300016371\|Ga0182034_10095995	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300016387\|Ga0182040_10111616	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300016387\|Ga0182040_10715820	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300016404\|Ga0182037_10931405	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300016404\|Ga0182037_11971767	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300016422\|Ga0182039_10058068	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300016422\|Ga0182039_10190585	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300016422\|Ga0182039_11300735	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300016422\|Ga0182039_11423395	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300016445\|Ga0182038_10497039	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300017970\|Ga0187783_10281612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1214	Open in IMG/M
3300017972\|Ga0187781_10561655	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300021171\|Ga0210405_10019374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5541	Open in IMG/M
3300021178\|Ga0210408_10922757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	679	Open in IMG/M
3300021420\|Ga0210394_11150395	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300021444\|Ga0213878_10059182	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300021475\|Ga0210392_10296351	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300021560\|Ga0126371_10120726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2645	Open in IMG/M
3300021560\|Ga0126371_10515549	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300021560\|Ga0126371_10976958	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300021560\|Ga0126371_13446165	Not Available	534	Open in IMG/M
3300025910\|Ga0207684_10784823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	806	Open in IMG/M
3300025939\|Ga0207665_11614756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	514	Open in IMG/M
3300026555\|Ga0179593_1112672	Not Available	2227	Open in IMG/M
3300027874\|Ga0209465_10291891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	817	Open in IMG/M
3300028047\|Ga0209526_10203114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1372	Open in IMG/M
3300031545\|Ga0318541_10788060	Not Available	530	Open in IMG/M
3300031546\|Ga0318538_10393931	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031573\|Ga0310915_10388048	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300031573\|Ga0310915_10989014	Not Available	587	Open in IMG/M
3300031719\|Ga0306917_10263264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1324	Open in IMG/M
3300031719\|Ga0306917_10266396	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300031719\|Ga0306917_10311940	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300031719\|Ga0306917_10866276	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031719\|Ga0306917_11108399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	616	Open in IMG/M
3300031744\|Ga0306918_10047964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2821	Open in IMG/M
3300031744\|Ga0306918_10213095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1461	Open in IMG/M
3300031744\|Ga0306918_10235073	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300031754\|Ga0307475_10475377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1004	Open in IMG/M
3300031781\|Ga0318547_10507290	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031833\|Ga0310917_10116955	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300031833\|Ga0310917_10697741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	687	Open in IMG/M
3300031890\|Ga0306925_10029254	All Organisms → cellular organisms → Bacteria → Proteobacteria	5597	Open in IMG/M
3300031890\|Ga0306925_10040316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4826	Open in IMG/M
3300031890\|Ga0306925_10103798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3027	Open in IMG/M
3300031890\|Ga0306925_10118680	All Organisms → cellular organisms → Bacteria	2829	Open in IMG/M
3300031890\|Ga0306925_10272163	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300031890\|Ga0306925_10718888	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300031910\|Ga0306923_10144431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2713	Open in IMG/M
3300031912\|Ga0306921_10107344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3241	Open in IMG/M
3300031912\|Ga0306921_10515296	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300031912\|Ga0306921_11500584	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031942\|Ga0310916_10100158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2327	Open in IMG/M
3300031942\|Ga0310916_10316142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1324	Open in IMG/M
3300031945\|Ga0310913_10463809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	899	Open in IMG/M
3300031947\|Ga0310909_11546990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	527	Open in IMG/M
3300031954\|Ga0306926_11513132	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300032001\|Ga0306922_10388437	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300032001\|Ga0306922_11889486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	585	Open in IMG/M
3300032008\|Ga0318562_10453465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	745	Open in IMG/M
3300032035\|Ga0310911_10235153	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300032044\|Ga0318558_10336820	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium 32-34-25	748	Open in IMG/M
3300032076\|Ga0306924_10027570	All Organisms → cellular organisms → Bacteria	6126	Open in IMG/M
3300032076\|Ga0306924_10040219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5127	Open in IMG/M
3300032076\|Ga0306924_10439943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1490	Open in IMG/M
3300032076\|Ga0306924_12621999	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032180\|Ga0307471_101111487	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300032261\|Ga0306920_100084356	All Organisms → cellular organisms → Bacteria	4678	Open in IMG/M
3300032261\|Ga0306920_100297301	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300033289\|Ga0310914_10240030	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.91%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_128974443	3300000789	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFNLDRLGAVLGSEAETEHTGYVIVKSHANPNTGDTIHLR*
JGI1027J11758_128999213	3300000789	Soil	MSCHEHDVPGTWRINLKWQGNHEISDFNLDRLGAVLGSEAETEHTGYVIVKSHANPNTGDTIHLR*
JGI1027J11758_129026672	3300000789	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGTVQSSEAESDHSGYVIVKSHVNPNIGDTIPAR*
JGIcombinedJ26739_1003671362	3300002245	Forest Soil	MKKDTTLVMSCHEHDVPGTWWINLKWQGNHEISDFDLDRLGAVLRSEAETDHTGCVIVKSHANQNIGDTIPLR*
Ga0062386_1012176331	3300004152	Bog Forest Soil	MKKDTALVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLRSEAETDHTGYVIVKSRANQNIGDTIPLR*
Ga0066395_108064011	3300004633	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPN
Ga0066388_1026092572	3300005332	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARKYARGD*
Ga0066388_1026914092	3300005332	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR*
Ga0066388_1067595822	3300005332	Tropical Forest Soil	MNKETAVVTSCHEHDTPGTWRINLKWEGDHEISDFALDRLGTVQSAEAETDHSGYVIVKSHTNPNIGDLIPSRK*
Ga0070706_1006278492	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHANPNIGDTIPLR*
Ga0070706_1015134072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDTALVMSCHEHDVPSTWRINLKWQGNHEISDFDLDRLGAVVRSEAETDHTGYVIVKSHAHQNIGDTIPLR*
Ga0066903_1014265992	3300005764	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTR
Ga0066903_1020252092	3300005764	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNPNIGDTIPLR*
Ga0066903_1076982882	3300005764	Tropical Forest Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHEISDFDLERLGVVQRSDAETAHTGYVIVKSHVNSNVGDTIPSR*
Ga0066903_1082312031	3300005764	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGAWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTR
Ga0070712_1014922531	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDTALVMSCHEHDVPNTWRINLKWQGHHEISDFDLDRLGAVLRSEAETEHTGHVIVKSHANPNTGDTIHLR*
Ga0070712_1016907671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	THMKKDTALVMSCHEHDVPSTWRINLKWQGNHEISDFDLDRLGAVVRSEAETDHTGYVIVKSHAHQNIGDTIPLR*
Ga0126374_107538311	3300009792	Tropical Forest Soil	NLTDIPRRVISGGVLGRPSRNKTDMKKDTAIVMSCHEHDVPGTWRINLKWQGEHEISDFDLERLGAVQRSEAETEHTGYVIVKSHTNPNIGDTIPLR*
Ga0126374_118879861	3300009792	Tropical Forest Soil	HEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSRTNPNIGDAIAAR*
Ga0126380_110125792	3300010043	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK*
Ga0126384_114527472	3300010046	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR*
Ga0126384_121846971	3300010046	Tropical Forest Soil	MKKDTPIVMSCHEHDVPGTWRINLKWRGKHEISDFDLDRLGAVQRSEAETEHTGYVIVKSHANPNIGDTIPAR*
Ga0126373_100562153	3300010048	Tropical Forest Soil	MKKDTALVTSCHEHDVIGTWRINLKWQGDHEITDFDLDRFGTVLTFQTDTEYSGYVIVKSASNPNIGDRLHLR*
Ga0126373_101278112	3300010048	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGAWRINLKWQGNHEISDFDPDRLGAVQQSEAETEQTGYVIVKSHANPNIGDTIPVR*
Ga0126373_111377971	3300010048	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSHTNPNIGDTIPLR*
Ga0126372_105518761	3300010360	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEILDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR*
Ga0126372_109581902	3300010360	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLGRLGVVQRSVAETEHSGYVIVK
Ga0126378_104366312	3300010361	Tropical Forest Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHEISDFGLERLGVVQRSEAETGHTGYVIVKSHVNPNVGDTIPLR*
Ga0126379_105571312	3300010366	Tropical Forest Soil	VISDAVLAEPHRNKAHMKKDTAIVMSCHEHDVPGAWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR*
Ga0126379_113952222	3300010366	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHGISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR*
Ga0126381_1002656892	3300010376	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSRTNPNIGDAIAAR*
Ga0126381_1003827712	3300010376	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGAWRINLKWQGNHEISDFDPDRLGAVQQSEAETEQTGYVIVKSHANPNIGHTIPVR*
Ga0137363_100053564	3300012202	Vadose Zone Soil	MKKDRALIMSCHEHDVTGTWRINLKWQGNHDISDFDLDRLGAVLSSEAETEHTGYVIVKSYANPNIGDTIALR*
Ga0137362_111873661	3300012205	Vadose Zone Soil	HMKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHANPNIGDTIPLR*
Ga0137378_102815992	3300012210	Vadose Zone Soil	MKKDTALVMSCHEHEVPGTWRINLKWQGNHEISDFDLDRLGAVLRSEAETEHTGYVVVKSHANPNIGDTIPLR*
Ga0137360_101679623	3300012361	Vadose Zone Soil	MSCHEHDVTGTWRINLKWQGNHDISDFDLDRLGAVLSSEAETEHTGYVIVKSYANPNIGDTIALR*
Ga0137360_104966822	3300012361	Vadose Zone Soil	MKKDTAIVMSCHEHDVPGTWRIKLKWQGNHEISDFDLDRLGAVLRSEAETEHTGYVIVKSHANPNIGDTIPLR*
Ga0137359_102485482	3300012923	Vadose Zone Soil	MKKDTALVMSCHEHEVPGTWRINLKWQGNHEISDFDLDRLGAVLRSEAETEHTGYVIVKSHANPNIGDTIPLR*
Ga0137404_117035071	3300012929	Vadose Zone Soil	HEHEVPGTWRINLKWQGNHEISDFDLDRLGAVLRSEAETEHTGYVIVKSHANPNIGDTIPLR*
Ga0164302_107440852	3300012961	Soil	MKKDAALVMSCHEHDVPSTWRINLKWQGNHEISDFDLDVRSEAETDHTGYVIVKSHAQQNIGDTIPLR*
Ga0126369_112729181	3300012971	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFVLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR*
Ga0182036_101355022	3300016270	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEILDFDLDRLGAVQRSEAESDHTGYVIVKSHTNPNIGDTIPLR
Ga0182041_100090655	3300016294	Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHDISDFDLERLGVVQRSEAETGHTGYVIVKSHVNPNVGDTIPLR
Ga0182033_104386342	3300016319	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPVRK
Ga0182035_107086102	3300016341	Soil	MKKDTAIVMNCHEHDVPGTWRINLKWQGKHAILDFDLERLGAVQRSEAETEHTGYVIVKS
Ga0182035_116843931	3300016341	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0182035_118983101	3300016341	Soil	HEHEVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSHTNPNIGDTIPARK
Ga0182034_100959952	3300016371	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR
Ga0182040_101116162	3300016387	Soil	DTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQEAETEHTGYVIVKSRTNPNTGDTIPARK
Ga0182040_107158202	3300016387	Soil	DTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR
Ga0182037_109314051	3300016404	Soil	PPRRVISDAVLAEPHRNKAHMKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDLERERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0182037_119717671	3300016404	Soil	VMSCHEHDVPGTWRINLKWQGQHQISDFDLERLGAVQRSEAETEHTGYLIVKSQANPNIGDTIPSRK
Ga0182039_100580682	3300016422	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNNEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNPNIGDTIPLR
Ga0182039_101905851	3300016422	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISHSDLERLGAVQRSEAETEHTGYVIVKSHTNPNIGDTIPARK
Ga0182039_113007352	3300016422	Soil	VISGAVLAGPSYQTDMKKDTAIVMSCHEHNVPGTWRINLKWQGQHEISDFDLERLGAVQRSEAETEHTGYVIVKSQANPNIGDTIPSRK
Ga0182039_114233952	3300016422	Soil	DTAIVMSCHEHDVPGTWRINLKWQGKHAILDFDLERLGAVQRSEAETEQTGYVIVKSNTTRNIGDTIPLR
Ga0182038_104970391	3300016445	Soil	KDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSQANPNIGDTIPSRK
Ga0187783_102816121	3300017970	Tropical Peatland	MKKDTALVTSCREHDVAGTWRINLKWQGDHEITDFNLERIGTVLSFQAETEHTGYVIVKS
Ga0187781_105616552	3300017972	Tropical Peatland	MKKDTALVTSCREHDVAGTWRINLKWHGDHEITDFNLERIGTVLSFQAETEHTGYVIVKSASSPNIGDRIHLR
Ga0210405_100193744	3300021171	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHVNPNTGDTIYLR
Ga0210408_109227571	3300021178	Soil	MKKDTALVMSCHEHDVPGIWRINLKWQSNHEISDFDLDRLGVVLRSEAETDHTGYVIVKSRANQNIGDTIPLR
Ga0210394_111503951	3300021420	Soil	ALVMSCHEHEVPNTWRINLKWQGNHEISDFDLDRLGAVLRSEAETDHTGYVVVKSHAHQNIGDTIPLR
Ga0213878_100591822	3300021444	Bulk Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSHANPNVGDTIPVR
Ga0210392_102963512	3300021475	Soil	MKKDAALVMSCHEHDVPSTWRINLKWQGNHEISGFDLDRLGVVVRSEAETDHTGYVIVKSHAHQNIGDTIPFAIIGAG
Ga0126371_101207263	3300021560	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFVLERLGAVQRSEAETENTGYVIVKSRANPNTGDTIPARK
Ga0126371_105155492	3300021560	Tropical Forest Soil	MKKDTALVTSCHEHDVIGTWRINLKWQGNHEITDFDLDRFGTVLTFQTDTEYSGYVIVKSASNPNIGDRLHLR
Ga0126371_109769582	3300021560	Tropical Forest Soil	MSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR
Ga0126371_134461651	3300021560	Tropical Forest Soil	MKKDTAIVMSCHEHDVPGAWRINLKWQGNHEISDFDPDRLGAVQQSEAETEQTGYVIVKSHANPNIGDTIPVR
Ga0207684_107848231	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHANPNIGDTIPLR
Ga0207665_116147561	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDTALVMSCHEHDVPSTWRINLKWQGNHEISDFDLDRLGAVVRSEAETDHTGYVIVKSHAHQNIGDTIPLR
Ga0179593_11126724	3300026555	Vadose Zone Soil	MKKDTALVMSCHEHEVPGTWRINLKWQGNHEISDFDLDRLGAVLRSEAETEHTGYVIVKSHANPNIGDTIPLR
Ga0209465_102918912	3300027874	Tropical Forest Soil	MSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEYTGYVIVKSRTNPNIGDAIPAR
Ga0209526_102031142	3300028047	Forest Soil	MKKDTTLVMSCHEHDVPGTWWINLKWQGNHEISDFDLDRLGAVLRSEAETDHTGCVIVKSHANQNIGDTIPLR
Ga0318541_107880602	3300031545	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIG
Ga0318538_103939311	3300031546	Soil	MKKDTAIVMSCHEHNVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0310915_103880482	3300031573	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR
Ga0310915_109890141	3300031573	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEILDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR
Ga0306917_102632641	3300031719	Soil	MSCHEHDVPGTWRINMKWQGNHEILDFDLDRLGAVQRSEAESDHTGYVIVKSHTNPNIGDTIPLR
Ga0306917_102663962	3300031719	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0306917_103119402	3300031719	Soil	MNKETAVVTSCHEHDTPGTWRINLKWEGDHEISDFALDRLGTVQSAEAETDHSGYVIVKSHTNPNIGDLIPSRK
Ga0306917_108662762	3300031719	Soil	IMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGVVQRSEAETEYTGYVIVKSNTTRNIGDTIHLR
Ga0306917_111083992	3300031719	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYEIVKSRANPNIGDTIPLR
Ga0306918_100479643	3300031744	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNPNIGDTIPLR
Ga0306918_102130952	3300031744	Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHEISDFDLERLGVVQRSEAETGHTGYVIVKSHVNPNVGDTIPLR
Ga0306918_102350732	3300031744	Soil	MSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0307475_104753771	3300031754	Hardwood Forest Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHANPNTGDTIHLR
Ga0318547_105072902	3300031781	Soil	AIVMSCHEHDVPGTWRINLKWQGNHEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNPNIGDTIPLR
Ga0310917_101169552	3300031833	Soil	KAHMKKDRAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0310917_106977412	3300031833	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNIGDTIPLR
Ga0306925_100292543	3300031890	Soil	VVTSCHEHDTPGTWRINLKWEGDHEISDFALDRLGTVQSAEAETDHSGYVIVKSHTNPNIGDLIPSRK
Ga0306925_100403164	3300031890	Soil	MKRDTAIVTSCHEHDAPDTWRINLKWQGDHEISDFDLERLGVVQRSEAETGHTGYVIVKSHVNPNVGDTIPLR
Ga0306925_101037982	3300031890	Soil	MKKDTAIVMSCHEHNVPGTWRINLKWQGQHEISDFDLERLGAVQRSEAETEHTGYVIVKSQANPNIGDTIPSRK
Ga0306925_101186803	3300031890	Soil	MKKDTAIIMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGVVQRSEAETEYTGYVIVKSNTTRNIGDTIHLR
Ga0306925_102721632	3300031890	Soil	VISDAVLAEPHRNKAHMKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0306925_107188882	3300031890	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPARK
Ga0306923_101444314	3300031910	Soil	MKRDTAIVTSCHEHDAPDTWRINLKWQGDHDISDFDLERLGVVQRSEAETGHTGYVIVKSHVNPNVGDTIPLR
Ga0306921_101073444	3300031912	Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHEISDFDLERLGVVQRSEAETGHTGYVIVK
Ga0306921_105152962	3300031912	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNSNIGDTIPLR
Ga0306921_115005842	3300031912	Soil	MKKDSALVTSCREHDAAGTWRINLKWQGDHAISDFDLERMGQVVRFEGETENSGYVIVKSSRNPNVGDTIQLRSK
Ga0310916_101001581	3300031942	Soil	MKKDTAIVMSCHEHNVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRSNPNIGDAIPLR
Ga0310916_103161422	3300031942	Soil	MKKDTAIVMSCHEHNVPGTWRINLKWQGQHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0310913_104638091	3300031945	Soil	MKKDTAIVMSCHEHDVPGTWRINMKWQGNHEILDFDLDRLGAVQRSEAETDHTGYVIVKSHTNPNIGDTIPLR
Ga0310909_115469901	3300031947	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISHSDLERLGAVHRSEAETEHTGYVIVKSHTNPNIGDTIPARK
Ga0306926_115131321	3300031954	Soil	EPHRNKAHMKKDTAIVMNCHEHDVPGTWRINLKWQGKHAILDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR
Ga0306922_103884372	3300032001	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0306922_118894861	3300032001	Soil	MNKETAVVTSCHEHDTPGTWRINLKWQGDHEISDFDLDRLGTVQSAEAETDRSGYVIVKSHTNPNIGDLIPSRK
Ga0318562_104534652	3300032008	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISHSDLERLGAVHRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0310911_102351532	3300032035	Soil	KDTAIVMSCHEHNVPGTWRINLKWQGNHEISDFDLERLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK
Ga0318558_103368201	3300032044	Soil	DAVLVEPHRNKAHMKKDTAIVMNCHEHDVPGTWRINLKWQGNHEISDFDLDRLGVVQRSEAETEYTGYVIVKSNTTRNIGDTIHLR
Ga0306924_100275705	3300032076	Soil	HRNKAHMKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGTVQRSEAETEHTGYVIVKSHANANIGDTIPAR
Ga0306924_100402195	3300032076	Soil	MKRDTAIVTSCHEHDAPGTWRINLKWQGDHEISDFDLERLGVVQRSEAETGHTGYVIVKSHANPNVGDTIPLR
Ga0306924_104399433	3300032076	Soil	MNKETAVVTSCHEHDTPGTWRINLKWEGDHEISDFALDRLGTVQSAEAETDHGGYVIVKSHTNPNIGDLIPSRK
Ga0306924_126219992	3300032076	Soil	VISDAVLAEPRRNKAHMKKDTAIVMSCHEHDVPGTWRINLKWQGKHEISDFDLERLGAVQRSEAETEHTGYEIVKSRANPNIGDTIPLR
Ga0307471_1011114872	3300032180	Hardwood Forest Soil	KKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLDRLGAVLGSEAETEHTGYVIVKSHANPNTGDTIHLR
Ga0306920_1000843563	3300032261	Soil	MKKDTAIVMSCHEHDVPGTWRINLRWQGNHEISDFDLDRLGVVQRSEAETEHSGYVILKTNTTPNIGNTIPLR
Ga0306920_1002973012	3300032261	Soil	MKKDTAIVMNCHEHDVPGTWRINLKWQGKHAILDFDLERLGAVQRSEAETEHTGYVIVKSNTTRNIGDTIPLR
Ga0310914_102400302	3300033289	Soil	MKKDTAIVMSCHEHDVPGTWRINLKWQGNHEISDFDLEHLGAVQRSEAETEHTGYVIVKSRANPNTGDTIPARK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences