Metagenome / Metatranscriptome Family F077611

Basic Information
Family ID	F077611
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	64 residues
Representative Sequence	ILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Number of Associated Samples	109
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.90 %
% of genes near scaffold ends (potentially truncated)	90.60 %
% of genes from short scaffolds (< 2000 bps)	96.58 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Bacteria (93.162 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.675 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.282 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.25% β-sheet: 8.79% Coil/Unstructured: 43.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01139	RtcB	30.77
PF00027	cNMP_binding	2.56
PF00496	SBP_bac_5	2.56
PF13714	PEP_mutase	1.71
PF10127	RlaP	1.71
PF12697	Abhydrolase_6	0.85
PF00557	Peptidase_M24	0.85
PF00581	Rhodanese	0.85
PF04545	Sigma70_r4	0.85
PF03435	Sacchrp_dh_NADP	0.85
PF04542	Sigma70_r2	0.85
PF05731	TROVE	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	30.77
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.16 %
Unclassified	root	N/A	6.84 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.20 %
Unclassified	root	N/A	6.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	76.92 %
Unclassified	root	N/A	6.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	70.94 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.71 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	67.52 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.52 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.71 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.85 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.52 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	1.71 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.85 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.52 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
unclassified Bacillus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria)	1.71 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.85 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.52 %
Unclassified	root	N/A	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.13 %
Bacillus sp. OxB-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. OxB-1	1.71 %
Kribbella sp. VKM Ac-2500	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2500	0.85 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01BGPNK	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
2067725004\|GPKC_F5V46DG02DUWH7	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300002244\|JGI24742J22300_10008281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1714	Open in IMG/M
3300004062\|Ga0055500_10150704	Not Available	550	Open in IMG/M
3300004479\|Ga0062595_102222533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300004643\|Ga0062591_102944828	Not Available	505	Open in IMG/M
3300005177\|Ga0066690_10924161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005178\|Ga0066688_10191728	Not Available	1295	Open in IMG/M
3300005178\|Ga0066688_10334299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300005329\|Ga0070683_100594607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300005341\|Ga0070691_10787263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300005354\|Ga0070675_100568365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300005355\|Ga0070671_100619072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300005364\|Ga0070673_102038894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005435\|Ga0070714_101426161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300005447\|Ga0066689_10921006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005548\|Ga0070665_101361335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300005578\|Ga0068854_101423506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300005617\|Ga0068859_100720566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1088	Open in IMG/M
3300005719\|Ga0068861_102307579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005764\|Ga0066903_104232544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300005841\|Ga0068863_101525698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300006046\|Ga0066652_101760552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300006047\|Ga0075024_100587085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006175\|Ga0070712_100050754	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300006237\|Ga0097621_100162837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1918	Open in IMG/M
3300006755\|Ga0079222_10644146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300006800\|Ga0066660_11617488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300006806\|Ga0079220_10606795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300006806\|Ga0079220_11797379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300006904\|Ga0075424_102711667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300006954\|Ga0079219_11508684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300009137\|Ga0066709_101827852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	851	Open in IMG/M
3300009137\|Ga0066709_103422854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300009148\|Ga0105243_10785107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300009789\|Ga0126307_10436535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2500	1056	Open in IMG/M
3300009792\|Ga0126374_10464512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300009792\|Ga0126374_11652013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300010039\|Ga0126309_10006674	All Organisms → cellular organisms → Bacteria	4547	Open in IMG/M
3300010043\|Ga0126380_10604374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300010043\|Ga0126380_11963946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010046\|Ga0126384_11813180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300010047\|Ga0126382_11163182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300010048\|Ga0126373_12002170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300010154\|Ga0127503_10414040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300010166\|Ga0126306_10876043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300010360\|Ga0126372_10325956	Not Available	1364	Open in IMG/M
3300010373\|Ga0134128_10843245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300010375\|Ga0105239_11281845	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010398\|Ga0126383_11823885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300010398\|Ga0126383_13215931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300011991\|Ga0120153_1020456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1502	Open in IMG/M
3300012096\|Ga0137389_10429164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300012209\|Ga0137379_11420632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300012358\|Ga0137368_10102410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2218	Open in IMG/M
3300012360\|Ga0137375_10300390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1452	Open in IMG/M
3300012510\|Ga0157316_1083662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300012515\|Ga0157338_1044465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. OxB-1	616	Open in IMG/M
3300012925\|Ga0137419_11404628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012930\|Ga0137407_10793202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300012944\|Ga0137410_10941775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300012951\|Ga0164300_10231953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300012958\|Ga0164299_10677775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300012960\|Ga0164301_10098985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1669	Open in IMG/M
3300012960\|Ga0164301_10896441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300012971\|Ga0126369_13411842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300013105\|Ga0157369_12509549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300013297\|Ga0157378_10402516	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1349	Open in IMG/M
3300013770\|Ga0120123_1105658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300015373\|Ga0132257_102133007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300015373\|Ga0132257_103263642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300017947\|Ga0187785_10612163	Not Available	561	Open in IMG/M
3300017974\|Ga0187777_11449848	Not Available	508	Open in IMG/M
3300018027\|Ga0184605_10166840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300018066\|Ga0184617_1251809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300018482\|Ga0066669_10367420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1203	Open in IMG/M
3300020081\|Ga0206354_11383997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300021344\|Ga0193719_10179403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300021560\|Ga0126371_11638777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300022534\|Ga0224452_1286631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300022694\|Ga0222623_10425857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300023077\|Ga0247802_1075468	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300024055\|Ga0247794_10222972	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300024187\|Ga0247672_1096927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025885\|Ga0207653_10042620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300025906\|Ga0207699_10803801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300025912\|Ga0207707_10236298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300025914\|Ga0207671_11351690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300025916\|Ga0207663_10838167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300025926\|Ga0207659_10471365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300025927\|Ga0207687_10687224	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300026078\|Ga0207702_11123371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300026088\|Ga0207641_11243110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300026095\|Ga0207676_10809755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300026121\|Ga0207683_10678288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300026142\|Ga0207698_11232329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300027056\|Ga0209879_1072060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300028379\|Ga0268266_10527651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300028705\|Ga0307276_10143275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300028722\|Ga0307319_10126598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. OxB-1	824	Open in IMG/M
3300028755\|Ga0307316_10056483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1325	Open in IMG/M
3300028778\|Ga0307288_10396170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300028784\|Ga0307282_10631566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300028814\|Ga0307302_10630295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300028824\|Ga0307310_10529511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300028828\|Ga0307312_10580340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300028878\|Ga0307278_10062443	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300028880\|Ga0307300_10098285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300028884\|Ga0307308_10286700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300031572\|Ga0318515_10671815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300031744\|Ga0306918_10604027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300031910\|Ga0306923_11421058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300031996\|Ga0308176_11395032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300032174\|Ga0307470_11913348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300032828\|Ga0335080_11776565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300032898\|Ga0335072_10592104	Not Available	1118	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.07%
Host-Associated	Host-Associated	23.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.09%
Plants	Host-Associated → Plants	23.93%
Aquatic	Environmental → Aquatic	5.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Sediment	Environmental → Aquatic → Sediment	4.27%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Marine	Environmental → Aquatic → Marine	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.40%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077611

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_03849740	2067725002	Soil	VADCHDRINLEFDVDSEAGRANSLHKLDTLIAAIRVFRRGVVDEFEYYDRRERELDEQRR
GPKC_02110090	2067725004	Soil	SIRGPILEIADCTDRINLEFEIGSEAARANSLHKLDTLISALRIFRKGIEEEFEHYDRREREVEELKGE
JGI24742J22300_100082815	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	CEDEECRRCPYNFEPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD*
Ga0055500_101507041	3300004062	Natural And Restored Wetlands	DDCPDCPHNFEPRTILEIADCSRRIELELDLDTERARLNSLHKLDTLIAALRVFRKGFAEEFEEYDRREQVLKGE*
Ga0062595_1022225331	3300004479	Soil	EPQMVLELADCTDRIQLEFDVDSEAGRANSLHKIDTLVAALRVFRQGLVDEFEPYDRRQRELEASRE*
Ga0062591_1029448281	3300004643	Soil	RINLEFDVDSEARRKNSLHKLDTLIAALRVFRSGVEAEFAEYDRRERELEALRKE*
Ga0066690_109241611	3300005177	Soil	PRMILEIADCSDRIDLEFDVDSEAGRANSLHKLDTLVAALRVFRNGIVAEFDEYDRRERQLEQQRRD*
Ga0066688_101917281	3300005178	Soil	AGRANSLHKLDTLVAALRVFRSGIVAEFDEYDRRERQLEQQRRD*
Ga0066688_103342991	3300005178	Soil	ILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD*
Ga0070683_1005946071	3300005329	Corn Rhizosphere	CPYNFEPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD*
Ga0070691_107872634	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DRINLEFDVDSEAGRANSLHKLDTLITALRVFREGIVAEFEPYDRREREVAARDE*
Ga0070675_1005683651	3300005354	Miscanthus Rhizosphere	FDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD*
Ga0070671_1006190721	3300005355	Switchgrass Rhizosphere	PHNFEPRMILELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR*
Ga0070673_1020388941	3300005364	Switchgrass Rhizosphere	EPRMTLEIADCYKRVNLDFDVDSEQARANSLHKLDTLIAALRVFRSGVEAEFAEYDRRERELKALRED*
Ga0070714_1014261614	3300005435	Agricultural Soil	YNFEPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD*
Ga0066689_109210061	3300005447	Soil	ECPYNFEPRMILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD*
Ga0070665_1013613354	3300005548	Switchgrass Rhizosphere	INLEFDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDELVR*
Ga0068854_1014235062	3300005578	Corn Rhizosphere	NFEPRMILEIADCDDRINLWFDLDSEAGRENSLHKLDTLIATLRVFRRGVVAEFGEYDRRERQLQE*
Ga0068859_1007205665	3300005617	Switchgrass Rhizosphere	DRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD*
Ga0068861_1023075791	3300005719	Switchgrass Rhizosphere	SEAGRANSLHKLDTLIAALRVFREGIVAEFEPYDERERELAARED*
Ga0066903_1042325444	3300005764	Tropical Forest Soil	FMFDVDSGEGRANSLHKIDTLVAALRVFRRALVDEFEPYDRREHELEASRE*
Ga0068863_1015256981	3300005841	Switchgrass Rhizosphere	FEPRMILELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR*
Ga0066652_1017605521	3300006046	Soil	DRINLYFDVDSEAGRDNSLHKLETLIAGLRVFRAGIVAEFGEYDRRERALQEHRGR*
Ga0075024_1005870851	3300006047	Watersheds	MFLELADCNDRITLEFDLDSTVGRENSLHKLDTLLAALRVFREGLVEEFEPYDRRQREFEALRR*
Ga0070712_1000507546	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QLDFDVDSDAGRANSLHKIDTLLAALRVFRQGVVDEFEPYDRRQRELDEFVR*
Ga0097621_1001628374	3300006237	Miscanthus Rhizosphere	MILELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR*
Ga0079222_106441464	3300006755	Agricultural Soil	DIDSEARRANSLHKVDTLIAALRVFRTGLVGEFEEYDRRERELEASRE*
Ga0066660_116174881	3300006800	Soil	DNFEPRMILEIADCSDRVDLEFDVDSEAGRANSLHKLDTLVAALRVFRSGIVAEFDEYDRRERQLEQQRRD*
Ga0079220_106067951	3300006806	Agricultural Soil	WFDIDSETQRANSLHKVDMLIAALRVFRKGLVSEFEEYDRRERELNASRE*
Ga0079220_117973791	3300006806	Agricultural Soil	ACDGCSYNFEPRMILELADCRDRINLEFDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDELVR*
Ga0075424_1027116673	3300006904	Populus Rhizosphere	DRINLEFDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDELVR*
Ga0079219_115086841	3300006954	Agricultural Soil	DTRERGLQRDNGCDDAECAKCPHNFEPRMFLELADCNDRITLEFDLDSTAGRENSLHKLDTLLAALRVFREGLVEEFEPYDKRQAELEASRE*
Ga0066709_1018278525	3300009137	Grasslands Soil	ESCRRCPYNFEPRMILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD*
Ga0066709_1034228541	3300009137	Grasslands Soil	DEDCHSCPYNFEPRIILEIADCDSRINLEFDVDTEAGRANSLHKLDTLLAALRVFREGVVAEFEQYDKRERELAELRS*
Ga0105243_107851071	3300009148	Miscanthus Rhizosphere	RIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR*
Ga0126307_104365351	3300009789	Serpentine Soil	NLELDLASEFERANSLHKLDTLIAALRVFRSGFVEEFDEYDRRVRELQANE*
Ga0126374_104645121	3300009792	Tropical Forest Soil	MILELADCHGRIALEFDVDSEAGRANSLHKLDTLLATLRVFREGLVAECGEYDRRERELDALGR*
Ga0126374_116520131	3300009792	Tropical Forest Soil	PEGRRANSLHKLDTLIAALRVFRQGLVDEFELYDRRQRELVALRE*
Ga0126309_100066747	3300010039	Serpentine Soil	FDVDTEAGRANSLHKLDTMLAALRVFREGVVAEFEPYDERERELAEQRD*
Ga0126380_106043741	3300010043	Tropical Forest Soil	FDVESEAGRANSLHKIDTLVAALRVFRQGLEDEFEPYDRRQRELDASRE*
Ga0126380_119639463	3300010043	Tropical Forest Soil	EPRMILELADCHGRIALEFDVDSEAGRANSLHKLDTLLATLRVFREGLVAECGEYDRRERELDALGR*
Ga0126384_118131801	3300010046	Tropical Forest Soil	IELDFDVDSEAGRANSLHKLDTLIATLRVFRSGIVKEFDEYDRRERELEQLRGE*
Ga0126382_111631823	3300010047	Tropical Forest Soil	CGADHEPYNFEPRMILEIADCSDRIELEFDVDSEAGRANSLHKLDTLIATLRVFRSGIVKEFDEYDRREHELEQLRGE*
Ga0126373_120021702	3300010048	Tropical Forest Soil	VRWVELEFDIDLEERRANSLHKIDTLLAALRVLRKGLVDEFEPYDRRERELEASRE*
Ga0127503_104140402	3300010154	Soil	MILEIADCNRWICLEFDVDSEAGRANSLHKLDTLLAALRVFREGLVAEFEPYDQRERELAEERD*
Ga0126306_108760435	3300010166	Serpentine Soil	DVDTEAGRANSLHKLDTILAALRVFREGIVAEFEPYDQRERELAEHRG*
Ga0126372_103259561	3300010360	Tropical Forest Soil	NFEPQMILELSTSSQAIEFTFDVDSEEGRANSLHKIDTLLAALRVFRQALVDEFEPYDRRQRELDASRE*
Ga0134128_108432454	3300010373	Terrestrial Soil	FDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDEFVR*
Ga0105239_112818451	3300010375	Corn Rhizosphere	PRTILEIADCEDRIQLEFYVDSTARRANSLHKLDTLIAALRVFRSGLETEFAEYDRREQELSELEGE*
Ga0126383_118238851	3300010398	Tropical Forest Soil	ILEIADCHDRIELQFDVDSEAGRANSLHKLDTLIAAIRVFRAGIVAEFEQYDRRERALDEQRRE*
Ga0126383_132159313	3300010398	Tropical Forest Soil	CEDCPYNFEPRMILEISDCNYRINLEFDVDSEARRLNSLHKLDTLIAALKVFRSGIVDEFGEYDRRERELEQEHRA*
Ga0120153_10204561	3300011991	Permafrost	QHCGGCQDENCQECPYNFEPRMILEIADCNRWIGLEFDVDSEMGRANSLHKLDTLLAALRVFREGIVAEFEPYDQRERELAEQRD*
Ga0137389_104291645	3300012096	Vadose Zone Soil	NFEPRMILEIADCNRWICLEFDVDSEAGRANSLHKLDTLLAALRVFRQGVVAEFEPYDQRERELAEQRD*
Ga0137379_114206325	3300012209	Vadose Zone Soil	DCNDRICLEFDVDSEAGRANSLHKLDTLLAGLRVFREGIVAEFEPYDQRERELAEQRD*
Ga0137368_101024106	3300012358	Vadose Zone Soil	LEFDVDTEAGRANSLHKLDTLIAALRVFREGMVAEFEPYDLREREVAARDE*
Ga0137375_103003901	3300012360	Vadose Zone Soil	LEITDCNDRINLEFDVDTEAGRANSLHKLDTLIAALRVFREGMVAEFEPYDLRERELAAREE*
Ga0157316_10836621	3300012510	Arabidopsis Rhizosphere	SRRVDLEFDVDSEAGRANSLHKLDTLISALRVFRAGIVAEGDEYQRRERELERRSG*
Ga0157338_10444651	3300012515	Arabidopsis Rhizosphere	LEFDVDSEAGRANSLHKLDTLISALRVFRAGIVAESDEYERRERELERRRSE*
Ga0137419_114046281	3300012925	Vadose Zone Soil	MILEIADCNGRINLEFDLDSEAGRANSLHKLDTLLAALRVFREGVELEFEPYDQRERELAEQRD*
Ga0137407_107932021	3300012930	Vadose Zone Soil	PYNFEPRMILEIADCTDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD*
Ga0137410_109417751	3300012944	Vadose Zone Soil	CNGRINLEFDVDSEAGRANSLHKLDTLLAALRVFREGVELEFEPYDQRERELVERRD*
Ga0126375_101645813	3300012948	Tropical Forest Soil	VDSEAGRANSLHKLDTLIATLRVFRSGIVKEFDEYDRREHELEQLRGE*
Ga0164300_102319531	3300012951	Soil	QHCGGCRDDQCRECPYNFEPRMILEIADCQDRIELEFDIDSEAARANSLHKLDTLITALRVFREGMVAEYEPYDERERELAEQRE*
Ga0164299_106777751	3300012958	Soil	FDLDSEVGRSNSLHKLDTLLAALRVFREGIVDEFEPYDRRQRELDELCR*
Ga0164301_100989855	3300012960	Soil	MILELADCRDRINLEFDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDELVR*
Ga0164301_108964415	3300012960	Soil	LEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRE*
Ga0126369_134118422	3300012971	Tropical Forest Soil	DSEAQRANSLHKVDTLIAALRVFRKGLVGEFAEYDRRERELDASRE*
Ga0157369_125095491	3300013105	Corn Rhizosphere	MILELADCHDRIQLEFDVDSEAGRANSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR*
Ga0157378_104025164	3300013297	Miscanthus Rhizosphere	INLEFDVDSDAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELDELVR*
Ga0120123_11056581	3300013770	Permafrost	MILEIADCNDRICLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD*
Ga0132257_1021330071	3300015373	Arabidopsis Rhizosphere	PCNFEPRMILQIADCSDRVDLEFDVDSEAGRANSLHKLDTLISALRVFRAGIVAEFDEFDRRQRELEQLNSD*
Ga0132257_1032636421	3300015373	Arabidopsis Rhizosphere	LELADCQTRINLEFDVDSKAGRENSLHKLDTLITALRIFREGIVAEFEPYDRRQCELDELSAPAGSG*
Ga0187785_106121631	3300017947	Tropical Peatland	PHNFEPRTILEIADCHRRIELELELDLDTERARQNSLHKLDTLIAALRVFRKGFVEEFEEYDRRAQALKGE
Ga0187777_114498482	3300017974	Tropical Peatland	DCPHNFEPRMILEIADCDRRIELEFDLDIERARLNSLHKLDTLIAALRVFRKGIVEEFEEYDRREQVLKGE
Ga0184605_101668402	3300018027	Groundwater Sediment	CGGCVDENCPECPYNFEPRMILEIADCTDRITLEVDVDSDAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAQQRD
Ga0184617_12518094	3300018066	Groundwater Sediment	ITLEFDVDSEAGRANSLHKLDTLLAALRVFREGIVAEFEPYDQRERELAEQRD
Ga0066669_103674201	3300018482	Grasslands Soil	PYNFEPRMILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVLAEFEPYDQRERELAEQRD
Ga0206354_113839974	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	ELEFEIDSEAARANSLHKVDTLLAALRVFRKGLVDEFAPYDRRQRKLDALRD
Ga0193719_101794035	3300021344	Soil	DCTDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Ga0126371_116387771	3300021560	Tropical Forest Soil	MILELADCHGRIALEFDVDSEAGRANSLHKLDTLLATLRVFREGLVAECGEYDRRERELDALGR
Ga0224452_12866313	3300022534	Groundwater Sediment	DENCRECPYNFEPRMILEIADCNDRISLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERDLAEQRD
Ga0222623_104258571	3300022694	Groundwater Sediment	MILEIADCNDRISLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Ga0247802_10754681	3300023077	Soil	DECEPENFEPRTILEIADCEDRIQLEFDVDSTARRANSLHKLDTLIAALRVFRSGLETEFAEYDRREQELSELKGE
Ga0247794_102229721	3300024055	Soil	EDRIQLEFDVDSTARRANSLHKLDTLIAALRVFRSGLETEFAEYDRREQELSELKGE
Ga0247672_10969274	3300024187	Soil	ELTFDVDSEEGRANSLHKIDTLLAALRVFRQALVDEFEPYDRRQRELGGSRE
Ga0207653_100426201	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0207699_108038014	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	FDVDSEAGRANSLHKLDTLITALRIFRDGVVAEFEPYDRRQRELEALRE
Ga0207707_102362981	3300025912	Corn Rhizosphere	GLQDCGGCADEECRRCPYNFEPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0207671_113516901	3300025914	Corn Rhizosphere	EPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0207663_108381671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	CGGCVDENCPECPYNFEPRMILEIADCNDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAERRD
Ga0207659_104713651	3300025926	Miscanthus Rhizosphere	FDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0207687_106872241	3300025927	Miscanthus Rhizosphere	CDECEPENFEPRTILEIADCEDRIQLEFDVDSTARRANSLHKLDTLIAALRVFRSGLETEFAEYDRREQELSELKGE
Ga0207702_111233714	3300026078	Corn Rhizosphere	LHNFEPRMILELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR
Ga0207641_112431101	3300026088	Switchgrass Rhizosphere	RMILELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELCR
Ga0207676_108097551	3300026095	Switchgrass Rhizosphere	EDEECRRCPYNFEPRMILEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0207683_106782881	3300026121	Miscanthus Rhizosphere	ELADCHDRIQLDFDVDSEAGRSNSLHKLDTLLAALRIFREGIVEEFEPYDRRQRELDELC
Ga0207698_112323294	3300026142	Corn Rhizosphere	PECTKCPYNFEPRMILEIADCNDRIELEFDVDSEAGRINSLHKLDTLLAALRTFREGIVQEFEPFDRRQRELDELCR
Ga0209879_10720601	3300027056	Groundwater Sand	IADCNDSIQLEFEVYSEARRANSLHKLDTLITALRVFRNGLEAEFAEYDRRELKLKELKS
Ga0268266_105276515	3300028379	Switchgrass Rhizosphere	LEIADCNDRIELEFDIDSEAGRANSLHKLDTLITALRIFREGVVAEYEPYDERERELAEQRD
Ga0307276_101432751	3300028705	Soil	LEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRKRELAEQRD
Ga0307319_101265981	3300028722	Soil	LEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Ga0307316_100564835	3300028755	Soil	ERGLQHCGGCEDDQCRECPYNFEPRMILEIADCHDRIELEFDIDSDAGRANSLHKLDTLITALRVFREGMVAEYEPYDERERELAEQRE
Ga0307288_103961704	3300028778	Soil	EDENCRECPYNFEPRMILEIADCNDRISLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRKRELAEQRD
Ga0307282_106315663	3300028784	Soil	EFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Ga0307302_106302955	3300028814	Soil	HDRIELEFDIDSDAGRANSLHKLDTLITALRVFREGMVAEYEPYDERERELAEQRE
Ga0307310_105295111	3300028824	Soil	EIADCNRWIGLEFDVDSEMGRANSLHKLDTLLAALRVFREGIVAEFEPYDQRERELAEHR
Ga0307312_105803405	3300028828	Soil	EPRMILEIADCHDRIELEFDIDSDAGRANSLHKLDTLITALRVFREGMVAEYEPYDERERELAEQRE
Ga0307278_100624433	3300028878	Soil	ECVHCPYNFEPRIILEISDCNGRINLECDVDSEAGRVNSLHKLDTLIAALRVFRSGIVEEFDEYDRRERDLENHRRD
Ga0307300_100982855	3300028880	Soil	DTRERGLEYDCDEEDCRTCPYNFEPRMILEIADCTDRITLEFDVDSEAGRANSLHKLDTLLAALRVFREGVVAEFEPYDQRERELAEQRD
Ga0307308_102867003	3300028884	Soil	ILEISDCNGRINLEFDVDSEAGRVNSLHKLDTLIAALRVFRSGIVREFDEYDRRERDLENHRRD
Ga0318515_106718151	3300031572	Soil	MILELADCHDRIQLEFDVDSEAGRANSLHKLDTLLATLRVFREGLVTEFGEYDRREHELELRR
Ga0306918_106040274	3300031744	Soil	MILELADCHDRIQLEFDVDSEAGRANSLHKLDTLLATLRVFREGLVTEFGEYDRREHELELR
Ga0306923_114210584	3300031910	Soil	NFEPRMILELSTGSEHIRFTFDVDTDAYRANSLHKLDTLIAALRVFRQGVVEEFEPYDRRQHELDALCE
Ga0308176_113950324	3300031996	Soil	QLEFDVDSEAGRANSLHKVDTLLAALRVFRQGLVDEFEPYDRRQRELDALRE
Ga0307470_119133483	3300032174	Hardwood Forest Soil	ECEHEPYNFEPRMILEIADCDDRINLEFDVDSEARRVNSLHKLDTLIAALRVFRTGIVEEFDEYDRRERELEEQRCD
Ga0335080_117765653	3300032828	Soil	PYNFEPRMELEITDCSRRINLEFDLDSKAGRANSLHKLDTLVAALRVFHEGFEAEFEPYDRRERELEAVKAKA
Ga0335072_105921042	3300032898	Soil	WEPEGLQNFEPRLILEIADGRRRVNLEFEIESEADRANSLHKIDTLIATLRVFRTGVEQEFEHYDRRERELESNE

Hidden Markov Model


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