Metagenome / Metatranscriptome Family F077671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077671
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	VLAWFVLSLIIVVVAAEPATDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP
Number of Associated Samples	112
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.46 %
% of genes near scaffold ends (potentially truncated)	76.92 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.350 % of family members)
Environment Ontology (ENVO)	Unclassified (27.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.026 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.57% β-sheet: 0.00% Coil/Unstructured: 46.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF12840	HTH_20	44.44
PF08044	DUF1707	9.40
PF12697	Abhydrolase_6	5.13
PF00561	Abhydrolase_1	5.13
PF13561	adh_short_C2	3.42
PF07690	MFS_1	2.56
PF13191	AAA_16	1.71
PF12802	MarR_2	1.71
PF00067	p450	1.71
PF07730	HisKA_3	0.85
PF02371	Transposase_20	0.85
PF12695	Abhydrolase_5	0.85
PF00440	TetR_N	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	1.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.85
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.85
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.85
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.10 %
Unclassified	root	N/A	35.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.10 %
Unclassified	root	N/A	35.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.10 %
Unclassified	root	N/A	35.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.14 %
Unclassified	root	N/A	35.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.28 %
Unclassified	root	N/A	35.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.32 %
Unclassified	root	N/A	35.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.71 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.85 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.85 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.85 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.90 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.85 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.85 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.85 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.90 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Micromonospora pisi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	0.85 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.90 %
Intrasporangium oryzae NRRL B-24470	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae → Intrasporangium oryzae NRRL B-24470	1.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.71 %
Micromonospora pisi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	0.85 %
Microlunatus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	0.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.85 %
Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10408134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300004080\|Ga0062385_10470964	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005435\|Ga0070714_101953444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi	572	Open in IMG/M
3300005437\|Ga0070710_11443276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae → Intrasporangium oryzae NRRL B-24470	515	Open in IMG/M
3300005439\|Ga0070711_100237607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1423	Open in IMG/M
3300005444\|Ga0070694_100122667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1866	Open in IMG/M
3300005457\|Ga0070662_100087164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2337	Open in IMG/M
3300005557\|Ga0066704_10585804	Not Available	720	Open in IMG/M
3300005560\|Ga0066670_10756814	Not Available	588	Open in IMG/M
3300005576\|Ga0066708_10797476	Not Available	593	Open in IMG/M
3300005602\|Ga0070762_10791372	Not Available	641	Open in IMG/M
3300005712\|Ga0070764_10541827	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005713\|Ga0066905_100617149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	920	Open in IMG/M
3300006052\|Ga0075029_100703785	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006102\|Ga0075015_100642499	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006173\|Ga0070716_100662254	Not Available	793	Open in IMG/M
3300006176\|Ga0070765_101154067	Not Available	732	Open in IMG/M
3300006796\|Ga0066665_10954558	Not Available	660	Open in IMG/M
3300006804\|Ga0079221_10108843	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300006806\|Ga0079220_11935120	Not Available	524	Open in IMG/M
3300009038\|Ga0099829_10096850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2289	Open in IMG/M
3300009090\|Ga0099827_10025850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4166	Open in IMG/M
3300009162\|Ga0075423_11390547	Not Available	751	Open in IMG/M
3300009162\|Ga0075423_11718046	Not Available	676	Open in IMG/M
3300009520\|Ga0116214_1027285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2047	Open in IMG/M
3300009522\|Ga0116218_1374569	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009698\|Ga0116216_10230280	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300010046\|Ga0126384_10305856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1309	Open in IMG/M
3300010303\|Ga0134082_10272920	Not Available	704	Open in IMG/M
3300010339\|Ga0074046_10000433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38444	Open in IMG/M
3300010358\|Ga0126370_10127122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1818	Open in IMG/M
3300010359\|Ga0126376_10035334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3423	Open in IMG/M
3300010360\|Ga0126372_13005356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300010361\|Ga0126378_13379801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300010373\|Ga0134128_10515642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1333	Open in IMG/M
3300010375\|Ga0105239_11569149	Not Available	761	Open in IMG/M
3300010376\|Ga0126381_101225617	Not Available	1084	Open in IMG/M
3300010397\|Ga0134124_10965773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300010398\|Ga0126383_13612082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300010876\|Ga0126361_10591493	Not Available	515	Open in IMG/M
3300012096\|Ga0137389_11572144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300012200\|Ga0137382_10188724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1413	Open in IMG/M
3300012201\|Ga0137365_10186545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1553	Open in IMG/M
3300012207\|Ga0137381_10769872	Not Available	835	Open in IMG/M
3300012210\|Ga0137378_10201556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1852	Open in IMG/M
3300012210\|Ga0137378_11035216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300012351\|Ga0137386_10768062	Not Available	692	Open in IMG/M
3300012359\|Ga0137385_10129796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2223	Open in IMG/M
3300012930\|Ga0137407_10099612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	2488	Open in IMG/M
3300012951\|Ga0164300_10341231	Not Available	800	Open in IMG/M
3300012984\|Ga0164309_10157806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300012985\|Ga0164308_12282583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300014487\|Ga0182000_10482317	Not Available	572	Open in IMG/M
3300015264\|Ga0137403_10257605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1653	Open in IMG/M
3300015372\|Ga0132256_100311891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1659	Open in IMG/M
3300016371\|Ga0182034_11364854	Not Available	619	Open in IMG/M
3300017959\|Ga0187779_11293597	All Organisms → cellular organisms → Bacteria → Terrabacteria group	516	Open in IMG/M
3300017973\|Ga0187780_11161943	Not Available	565	Open in IMG/M
3300018060\|Ga0187765_11271011	Not Available	520	Open in IMG/M
3300018085\|Ga0187772_10145989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1560	Open in IMG/M
3300020580\|Ga0210403_10639081	Not Available	857	Open in IMG/M
3300020583\|Ga0210401_11597109	Not Available	510	Open in IMG/M
3300021420\|Ga0210394_11326274	Not Available	614	Open in IMG/M
3300024279\|Ga0247692_1019132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1045	Open in IMG/M
3300025906\|Ga0207699_10513176	Not Available	866	Open in IMG/M
3300025912\|Ga0207707_11348066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300025916\|Ga0207663_10213414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300025972\|Ga0207668_10822594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300026330\|Ga0209473_1305773	Not Available	531	Open in IMG/M
3300027698\|Ga0209446_1125802	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300027725\|Ga0209178_1068523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1155	Open in IMG/M
3300027846\|Ga0209180_10283752	Not Available	950	Open in IMG/M
3300027903\|Ga0209488_11217012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1	506	Open in IMG/M
3300028791\|Ga0307290_10304427	Not Available	584	Open in IMG/M
3300030494\|Ga0310037_10046769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300031231\|Ga0170824_103611056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae → Intrasporangium oryzae NRRL B-24470	569	Open in IMG/M
3300031543\|Ga0318516_10052001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2231	Open in IMG/M
3300031572\|Ga0318515_10053892	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300031573\|Ga0310915_10623653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300031640\|Ga0318555_10067368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1844	Open in IMG/M
3300031668\|Ga0318542_10629306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300031680\|Ga0318574_10608844	Not Available	640	Open in IMG/M
3300031736\|Ga0318501_10769228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300031744\|Ga0306918_10951062	Not Available	668	Open in IMG/M
3300031768\|Ga0318509_10039183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus flavus	2365	Open in IMG/M
3300031771\|Ga0318546_10545311	Not Available	815	Open in IMG/M
3300031798\|Ga0318523_10194706	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031799\|Ga0318565_10174900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1043	Open in IMG/M
3300031805\|Ga0318497_10153921	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300031821\|Ga0318567_10517704	Not Available	677	Open in IMG/M
3300031896\|Ga0318551_10927712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300031939\|Ga0308174_10236980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1411	Open in IMG/M
3300031945\|Ga0310913_10110763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1866	Open in IMG/M
3300031947\|Ga0310909_11068352	Not Available	657	Open in IMG/M
3300032001\|Ga0306922_10569295	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300032008\|Ga0318562_10060518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2095	Open in IMG/M
3300032025\|Ga0318507_10094787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1239	Open in IMG/M
3300032052\|Ga0318506_10198180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300032067\|Ga0318524_10008990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4153	Open in IMG/M
3300032068\|Ga0318553_10254223	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300032068\|Ga0318553_10596380	Not Available	578	Open in IMG/M
3300032089\|Ga0318525_10055311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300032090\|Ga0318518_10275276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	864	Open in IMG/M
3300032205\|Ga0307472_101355347	Not Available	688	Open in IMG/M
3300032261\|Ga0306920_103107962	Not Available	624	Open in IMG/M
3300032770\|Ga0335085_10963922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300032782\|Ga0335082_10035028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5306	Open in IMG/M
3300032828\|Ga0335080_11493984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300032954\|Ga0335083_10045120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4724	Open in IMG/M
3300033158\|Ga0335077_12142918	Not Available	515	Open in IMG/M
3300033289\|Ga0310914_11102797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300033290\|Ga0318519_10772883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.02%
Host-Associated	Host-Associated	5.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.60%
Plants	Host-Associated → Plants	5.98%
Aquatic	Environmental → Aquatic	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.98%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Sediment	Environmental → Aquatic → Sediment	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.94%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_104081342	3300001867	Forest Soil	WRERYWRRVVLAWFVLSMIVVMVAAEPSAYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP*
Ga0062385_104709642	3300004080	Bog Forest Soil	NWRRAVLTWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP*
Ga0070714_1019534441	3300005435	Agricultural Soil	RYWRRAVLAWSVMCLICLAISAEPATAFPKAQARSVPAVGLVMKVAGGLTVAGVPVVLIALP*
Ga0070710_114432762	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LAQWRARHWRRVVLAWFVLSLITVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLVALP*
Ga0070711_1002376071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AQWRARHWRRVVLAWFVLSLITVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLVALP*
Ga0070694_1001226673	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	WRRAVLAWFVLSLIIVGVAAEPATAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP
Ga0070662_1000871641	3300005457	Corn Rhizosphere	AWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0066704_105858042	3300005557	Soil	RRAVLAWFVLSLIIVAVAAEPKTYFPKAQASSVPAVRMILHVAGGLTVAGVPVLLIALP*
Ga0066670_107568142	3300005560	Soil	RNWRRAVLAWFVLSLIIVVVAAEPKTDFPKAQLRSAPAARMFLRVAGELTAAGVPVLLVALP*
Ga0066708_107974761	3300005576	Soil	VLAWFVLSLIIVGVAAEPATDFPRAQLRSVPAARTFLRVAGELTAAGVPVLL
Ga0070762_107913722	3300005602	Soil	AVLAWFVLSLIIVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLVALP*
Ga0070764_105418272	3300005712	Soil	RAVLAWFVLSLIVMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0066905_1006171491	3300005713	Tropical Forest Soil	RVVLAWFVLSLIIVGVAAEPATYFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0075029_1007037851	3300006052	Watersheds	VLAWFVLSLIIMAVSAEPATDFPKAQAGSVPAVRMVLRVAGGLTAAGVPVLLIALP*
Ga0075015_1006424992	3300006102	Watersheds	LSLIVMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTVAGVPVLLIALP*
Ga0070716_1006622541	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	WRRVVLAWFVLSLIIMAIAAEPKTDFPRAQVGSVPAVGTVLRVAGGLTVAGVPVVLVALP
Ga0070765_1011540671	3300006176	Soil	GWRARNWRRAVLTWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMFMRVAGGLTAAGVPVLLIALP*
Ga0066665_109545581	3300006796	Soil	WFVLSLIIVVVAAEPKTDFPKAQLRSAPAARMFLRVAGELTAAGVPVLLVALP*
Ga0079221_101088431	3300006804	Agricultural Soil	LAWFVFSMVIVMMTAEPKTDFPKAQARSVPAVQMFLRVAGGLTVAGVPVLLIVLP*
Ga0079220_119351201	3300006806	Agricultural Soil	QRLAQWRARNWRRAVLAWFVLSLIIVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP*
Ga0099794_104799482	3300007265	Vadose Zone Soil	LIIMVVAAEPKTDFPKAQASSVPAVRMFLQVAGELTVAGVPVVLIALP*
Ga0099829_100968502	3300009038	Vadose Zone Soil	VLAWFVLSLIIMAVAAEPRTDFPKAQARSVPALQMILHVAGGFIVAGVPVLLIALP*
Ga0099827_100258506	3300009090	Vadose Zone Soil	VLAWFVLSLIIMAASAEPASYFPKAQARSVPAVGMVLHVAGGLTMAGVPVLLIALP*
Ga0075423_113905471	3300009162	Populus Rhizosphere	VLAWFVLSLIIVGVAAEPATAFPKAQLRSVPAARTFLRVAGALTVAGV
Ga0075423_117180461	3300009162	Populus Rhizosphere	QRLAQWRARYWRRAVLAWFVLSLIIVGVGAEPATAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0116214_10272851	3300009520	Peatlands Soil	LIIMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTAAGVPVLLIALP*
Ga0116214_10286443	3300009520	Peatlands Soil	LIIMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTAAGVPMLLIALP*
Ga0116218_13745692	3300009522	Peatlands Soil	AVLTWFVLSLIIMAVSAEPKTDFPKAQARSVPAVRTVLRVAGGLTAAGVPVLLIALP*
Ga0116216_102302802	3300009698	Peatlands Soil	WFVLSLIIMAVSAEPKTDFPKAQARSVPAVRTVLRVAGGLTAAGVPVLLIALP*
Ga0126384_103058561	3300010046	Tropical Forest Soil	RQRLAQWRARHWRRVVLAWFVLSLIIVGVAAEPATYFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0134082_102729201	3300010303	Grasslands Soil	LRARNWRRAVLAWFVLSLIIVVVAAEPKTDFPKAQLRSAPAARMFLRVAGELTAAGVPVLLVALP*
Ga0074046_1000043336	3300010339	Bog Forest Soil	VLVWFVLSMIIMAVAAEPRTDFPKAQVRSVPAVGMVLRVAGGLTVAGVPVLLIALP*
Ga0126370_101271223	3300010358	Tropical Forest Soil	VLAWFVLSLIIVGVAAEPATYFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0126376_100353343	3300010359	Tropical Forest Soil	VLAWFVLSLIIVGVAAEPATEFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0126372_130053562	3300010360	Tropical Forest Soil	YWRRIVLAWFVLSMITVLAAAEPSTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP*
Ga0126378_133798011	3300010361	Tropical Forest Soil	MIVVMVAAEPSAYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP*
Ga0134128_105156422	3300010373	Terrestrial Soil	VLAWFVLSLIIVGVAAEPATAFPKAQLRSVPAARTFLRVAGTLTVAGVPVLLVALP*
Ga0105239_115691491	3300010375	Corn Rhizosphere	WRHAVLAWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVTGALTVAGVPVLLVALP
Ga0126381_1012256172	3300010376	Tropical Forest Soil	VEWRARHWRRAVLAWFVLSLIIMIVAAEPGNYFPKAQTRSVPAVRMFLRVAGGLTVAGVPVLLIGLP*
Ga0134124_109657731	3300010397	Terrestrial Soil	WRARHWRHAVLAWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0126383_136120822	3300010398	Tropical Forest Soil	QWRARHWRRVVLAWFVLSLIIVGVAAEPATDFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0126361_105914931	3300010876	Boreal Forest Soil	VANWRARNWRRAVLAWSVVMLALMATAAEPSTDFPKAQAASVPAVRVVLRVTEVLTLTGVPALLIALP*
Ga0137389_115721442	3300012096	Vadose Zone Soil	VLAWFVLSLIIMAASAEPASYFPKAQARSVPAVGMVLHVAGGLTVAGVPVLLIALP*
Ga0137382_101887241	3300012200	Vadose Zone Soil	SLMIVGVAAEPATAFPKAQLRSVPASRTFLRVAGALIVAGVPVLPVALP*
Ga0137365_101865452	3300012201	Vadose Zone Soil	MMRQALTEALSLIIVVVAAEPSTEFPKAQLRSVPAARTFLRVAGALTAAGVPVLLIALP*
Ga0137381_107698722	3300012207	Vadose Zone Soil	WRARNWRRAVLAWFVLSLIIMAVAAEPKTDFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLIALP*
Ga0137378_102015564	3300012210	Vadose Zone Soil	VLAWFVLSLIIMAAAAEPASYFPKAQARSVPAVGMVLHVAGGLTVAGVPVLLIALP*
Ga0137378_110352162	3300012210	Vadose Zone Soil	VLAWFVLSLIIVVVAAEPKTDFPKAQLRSVPAARMFLRVAGELTAAGVPVLLVALP*
Ga0137386_107680622	3300012351	Vadose Zone Soil	VLAWFVLSLIIVVVAAEPSTEFPKAQLRSVPAARTFLRVAGALTAAGVPV
Ga0137385_101297961	3300012359	Vadose Zone Soil	MMRQALTEALSLIIVVVAAEPSTEFPKAQLRSVPAARTFLRVAGALTAAGVPVLLLA
Ga0137407_100996123	3300012930	Vadose Zone Soil	FVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGTLTVAGVPVLLVALP*
Ga0164300_103412312	3300012951	Soil	MAWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAWALTVAGVPVLLGALP*
Ga0164309_101578061	3300012984	Soil	LAQWRARHWRRAVLAWFVLALVIVGVAAEPATAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP*
Ga0164308_122825832	3300012985	Soil	VLAWSVMCLICLAISAEPATAFPKAQAHSVPAVGVIMKVAGGLTVAGVPVVLIALP*
Ga0182000_104823172	3300014487	Soil	LSLIIVGVAAEPATDFPKAQLRSVPAARTFLRVAGTLTVAGVPVLLVALP*
Ga0137403_102576053	3300015264	Vadose Zone Soil	RNWRRVVLAWFVLSLIIVGVAAEPAMAFPKAQLRSVPAARTFLRVAGTLTVAGVPVLLVALP*
Ga0132256_1003118912	3300015372	Arabidopsis Rhizosphere	VAWRERYWRRVVLAWFVLSMIVVMVAAEPSAYFPKAQTRSVPAVQTFLRVAGGLTMAGVPVLLIALP*
Ga0132256_1029990631	3300015372	Arabidopsis Rhizosphere	IVGVAAEPAADFPKAQLRSVPSARAFLRVAGELTVVGVPVLLVALP*
Ga0182034_113648542	3300016371	Soil	RLVAWRARYWRRIVLAWFALSVIIMLMSAEPTADFPKAQVRSVPAVQMFLRVAGGLTVAGVPVLLIALP
Ga0187779_112935972	3300017959	Tropical Peatland	RARNWRRAVLAWFVVSLAILAVTAESKTDFPKAQAGSVPAARVVMRVAGGLTVAGVPLLLIALP
Ga0187780_111619432	3300017973	Tropical Peatland	VLAWFALSLVIMAITAEPGTDFPKAQARSVPAVRMVLRVAGGLTVAGVPLLLVALP
Ga0187765_112710111	3300018060	Tropical Peatland	RAVLAWFVLSLAILAIASEPKADFPKAQARSVPAVRMVLRVAGGLTVAGVPVLLVALP
Ga0187772_101459893	3300018085	Tropical Peatland	FVLSLIIMAVAAEPKTDFPKAQASSVPAVRMILRVTGVLTAAGVPLLLIALP
Ga0210403_106390813	3300020580	Soil	LAWFVLSLIIVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP
Ga0210401_115971091	3300020583	Soil	RAVLAWFVLSLIIVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP
Ga0210394_113262741	3300021420	Soil	VLGWFVLSLITVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIVLP
Ga0247692_10191321	3300024279	Soil	HAVLAWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP
Ga0207699_105131761	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LITVVVAAEPSTDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLVALP
Ga0207707_113480662	3300025912	Corn Rhizosphere	VMCLICLAISAEPATAFPKAQARSVPAVGVVMKVAGGLTVAGVPVVLIALP
Ga0207663_102134142	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AEWRARYWRRAVLAWSVMCLICLAISAEPATAFPKAQARSVPAVGLIMKVAGGLTVAGVPVILIALP
Ga0207668_108225942	3300025972	Switchgrass Rhizosphere	SLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP
Ga0209473_13057732	3300026330	Soil	EWRARNWRRAVLAWFVLSLIIVVVAAEPKTDFPKAQLRSAPAARMFLRVAGELTAAGVPVLLVALP
Ga0209446_11258021	3300027698	Bog Forest Soil	TWFVLSLIIMAVSAEPRTDFPKAQARSVPAVRMVLRVAGGLTAAGVPVLLIALP
Ga0209178_10685232	3300027725	Agricultural Soil	QRLARWRARHWRHAVLAWFVLSLIIVGVAAEPAAAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP
Ga0209180_102837521	3300027846	Vadose Zone Soil	RAVLAWFVLSLIIMAVAAEPRTDFPKAQARSVPALQMILHVAGGFIVAGVPVLLIALP
Ga0209488_112170122	3300027903	Vadose Zone Soil	SLIIVVVAAEPATNFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP
Ga0307290_103044271	3300028791	Soil	SLIIVGVAAEPATAFPKAQLRSVPAARTFLRVAGALTVAGVPVLLVALP
Ga0310037_100467691	3300030494	Peatlands Soil	SLIIMAVSAEPRTDFPKAQARSVPAVGMVLRVAGGLTAAGVPVLLIALP
Ga0170824_1036110561	3300031231	Forest Soil	VLAWFVLSLIIVVVAAEPATDFPKAQLRSVPAARTFLRVAGELTAAGVPVLLIALP
Ga0318516_100520014	3300031543	Soil	VLAWFVLSLIIVAIAAEPAMDFPKAQVRSVPAVRTVLRVTGGVTVAGVPVLLIALP
Ga0318515_100538921	3300031572	Soil	SLIITAIAAEPAMYFPKAQARSVPVVRTVLRVTGGVTVAGVPVLLIALP
Ga0310915_106236531	3300031573	Soil	ARNWRRVVLVWFALSMIIMLMAAEPTADFPKAQVRSVPAVQMFLRVAGGLTVAGVPVLLIALP
Ga0318555_100673681	3300031640	Soil	RYWRRIVLAWFALSMIILMVAAEPSTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318542_106293062	3300031668	Soil	TTRRLAGWRARNWRRVVLAWFALSMIIMLMAAEPRADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0318574_106088442	3300031680	Soil	AWFVLSMIIVMMAAEPTTDFPKAQARSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318501_107692281	3300031736	Soil	FALSVIIMLMSAEPTADFPKAQVRSVPAVQMFLRVAGGLTVAGVPVLLIALP
Ga0306918_109510622	3300031744	Soil	VLPLIIVAIAAEPAMYFPKAQVRSVPAVRTALRVTGGVTLAGVPVLLIALP
Ga0318509_100391833	3300031768	Soil	AEWRARNWRRVVLAWFALSLIIVVLAAEPNTDFPKAQLRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318546_105453112	3300031771	Soil	RARNWRRAVLMWFVLSLIFMAIAAEPATDFPRAQAHSVPAVQTVLRVAGGLTAAGIPVLLIALP
Ga0318557_104845291	3300031795	Soil	MIIVVMAAEPKTDFPKAQARSVPAVQMFLRVAGGLTVAGVPVLLIALP
Ga0318523_101947061	3300031798	Soil	LVAWRARNWRRVVLAWFVLSMIIMMTAAEPSTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP
Ga0318565_101749001	3300031799	Soil	RRVVLAWFALSMIILMVAAEPSTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318497_101539213	3300031805	Soil	SMIIMMMAAEPTTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP
Ga0318567_105177041	3300031821	Soil	FVLSMIIMMTAAEPSTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP
Ga0318551_109277122	3300031896	Soil	SMIILMVAAEPSTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0308174_102369801	3300031939	Soil	EWRARHWRRAVLAWSVMCLICVAISAEPATAFPKAQARSVPAVGVLMKVAGGLTVAGVPVVLIALP
Ga0310913_101107631	3300031945	Soil	NWRRVVLAWFALSLIIVVLAAEPNTDFPKAQLRSVPAVQTFLRVAGGLTVAGMPVLLIAL
Ga0310909_110683521	3300031947	Soil	VLAWFALSMIIMLMAAEPRADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0306922_105692953	3300032001	Soil	VVLAWFVLSMIIMMMAAEPTTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP
Ga0318562_100605184	3300032008	Soil	VLAWFVLSMIIMMTAAEPSTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP
Ga0318507_100947871	3300032025	Soil	VLVWFALSMIIMLMAAEPTADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0318506_101981801	3300032052	Soil	TSAGTRRLAGWRARNWRRVVLVWFALSMIIMLMAAEPTADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0318513_103315423	3300032065	Soil	MIIMLMAAEPRADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0318524_100089901	3300032067	Soil	AWFALSMIILMVAAEPSTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318553_102542231	3300032068	Soil	AWFVLSLIIVAIAAEPAMYFPKAQVRSVPAVRTALRVTGGVTLAGVPVLLIALP
Ga0318553_105963802	3300032068	Soil	VLAWFALSVIIMLMSAEPTADFPKAQVRSVPAVQMFLRVAGGLTVAGVPVLLIALP
Ga0318525_100553113	3300032089	Soil	LAWFALSLIIVVLAAEPNTDFPKAQLRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0318518_102752761	3300032090	Soil	VLAWFALSLIIVVLAAEPNTDFPKAQLRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0307472_1013553471	3300032205	Hardwood Forest Soil	HWRHAVLAWSVLCLICLAISAEPGTAFPKAQVRSVPAAGVIMKVAGGLTVAGVPVILIAL
Ga0306920_1031079621	3300032261	Soil	LMWFVLSLIIMAVAAEPKSDFPKAQARSLPAVQTILRVAGGLTVAGVPVLLVALP
Ga0335085_109639222	3300032770	Soil	FVLSMIIVMAAAEPSAYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0335082_100350284	3300032782	Soil	VLAWFVLSMITVMAAAEPSTYFPKAQSRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0335080_114939841	3300032828	Soil	AWRARNWRRFVLAWFVLSLIIMAIAAEPKTDFPRAQAGSVPAVGTVLQVAGGLTVAGVPVLLVALP
Ga0335083_100451201	3300032954	Soil	VLAWFVLSMITVMAAAEPGTYFPKAQTRSVPAVQTFLRVAGGLTVAGVPVLLIALP
Ga0335077_121429182	3300033158	Soil	RRIAQWRARNWRRVVLAWFVLSLVIMAVASSVPAAGTLMRVAGGLTVAGVPVVLVALP
Ga0310914_111027971	3300033289	Soil	RFTTAGTRRLAGWRARNWRRVVLAWFALSMIIMLMAAEPRADFPKAQVRSVPAVQMLLRVAGGLTVAGVPVLLIALP
Ga0318519_107728832	3300033290	Soil	RVVLAWFVLSMIIMMMAAEPTTDFPKAQARSVPAVQTVLRVAGGLTVAGVPVLLIALP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences