Metagenome / Metatranscriptome Family F077686

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077686
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	88 residues
Representative Sequence	EIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Number of Associated Samples	98
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.59 %
% of genes near scaffold ends (potentially truncated)	47.01 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.350 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.991 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.16% β-sheet: 0.00% Coil/Unstructured: 25.84%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02518	HATPase_c	17.09
PF07568	HisKA_2	16.24
PF08448	PAS_4	11.97
PF02566	OsmC	1.71
PF08483	Obsolete Pfam Family	0.85
PF00270	DEAD	0.85
PF04828	GFA	0.85
PF13581	HATPase_c_2	0.85
PF06742	DUF1214	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	16.24
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.71
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.71
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.85
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	98.29 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	94.87 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	63.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	63.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.71 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	63.25 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	63.25 %
Bradyrhizobium sp. cf659	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10092288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	595	Open in IMG/M
3300001545\|JGI12630J15595_10116471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	527	Open in IMG/M
3300001664\|P5cmW16_1012471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1633	Open in IMG/M
3300002245\|JGIcombinedJ26739_101056197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	698	Open in IMG/M
3300002245\|JGIcombinedJ26739_101697391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	531	Open in IMG/M
3300003505\|JGIcombinedJ51221_10312435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	639	Open in IMG/M
3300004152\|Ga0062386_100406830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300005176\|Ga0066679_10178007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1346	Open in IMG/M
3300005177\|Ga0066690_10866919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	580	Open in IMG/M
3300005435\|Ga0070714_102270775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	528	Open in IMG/M
3300005552\|Ga0066701_10974398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	501	Open in IMG/M
3300005557\|Ga0066704_10934036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300005602\|Ga0070762_10338795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	956	Open in IMG/M
3300005610\|Ga0070763_10642078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	618	Open in IMG/M
3300006173\|Ga0070716_100410159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	977	Open in IMG/M
3300006176\|Ga0070765_100908092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	832	Open in IMG/M
3300006176\|Ga0070765_101760155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300006796\|Ga0066665_11542787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	520	Open in IMG/M
3300006797\|Ga0066659_11651786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	539	Open in IMG/M
3300006852\|Ga0075433_10736195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	863	Open in IMG/M
3300006871\|Ga0075434_100701048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1030	Open in IMG/M
3300006893\|Ga0073928_11000064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	569	Open in IMG/M
3300006893\|Ga0073928_11128131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	530	Open in IMG/M
3300006893\|Ga0073928_11168633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	519	Open in IMG/M
3300006893\|Ga0073928_11239784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	501	Open in IMG/M
3300006904\|Ga0075424_100638083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300009012\|Ga0066710_102224047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	800	Open in IMG/M
3300009038\|Ga0099829_10492022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1018	Open in IMG/M
3300009088\|Ga0099830_10617459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	890	Open in IMG/M
3300009088\|Ga0099830_10771237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	793	Open in IMG/M
3300009089\|Ga0099828_10026284	All Organisms → cellular organisms → Bacteria → Proteobacteria	4631	Open in IMG/M
3300009090\|Ga0099827_10203618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1647	Open in IMG/M
3300009090\|Ga0099827_11013849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300009137\|Ga0066709_101730505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	884	Open in IMG/M
3300009143\|Ga0099792_10325120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	920	Open in IMG/M
3300009522\|Ga0116218_1313107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300009524\|Ga0116225_1480130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	552	Open in IMG/M
3300009525\|Ga0116220_10206042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	853	Open in IMG/M
3300010154\|Ga0127503_10618631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300010339\|Ga0074046_10395561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	835	Open in IMG/M
3300011269\|Ga0137392_10566571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300011269\|Ga0137392_11602832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	509	Open in IMG/M
3300011271\|Ga0137393_10062836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. cf659	2937	Open in IMG/M
3300012096\|Ga0137389_10042031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3402	Open in IMG/M
3300012202\|Ga0137363_10729737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	839	Open in IMG/M
3300012205\|Ga0137362_10079887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2726	Open in IMG/M
3300012205\|Ga0137362_11587825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	541	Open in IMG/M
3300012206\|Ga0137380_10803705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	812	Open in IMG/M
3300012208\|Ga0137376_10871004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	774	Open in IMG/M
3300012211\|Ga0137377_10692078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	954	Open in IMG/M
3300012211\|Ga0137377_11016938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	759	Open in IMG/M
3300012350\|Ga0137372_10100917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2422	Open in IMG/M
3300012351\|Ga0137386_10380626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1016	Open in IMG/M
3300012354\|Ga0137366_10108820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2098	Open in IMG/M
3300012357\|Ga0137384_10163063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1865	Open in IMG/M
3300012582\|Ga0137358_10384938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300012677\|Ga0153928_1002389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7668	Open in IMG/M
3300012677\|Ga0153928_1070439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	671	Open in IMG/M
3300012917\|Ga0137395_10586122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300012924\|Ga0137413_10957091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	669	Open in IMG/M
3300013503\|Ga0120127_10020958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1163	Open in IMG/M
3300013770\|Ga0120123_1019783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1352	Open in IMG/M
3300014495\|Ga0182015_10542885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	741	Open in IMG/M
3300019890\|Ga0193728_1014608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3941	Open in IMG/M
3300020580\|Ga0210403_11240195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	572	Open in IMG/M
3300020580\|Ga0210403_11292783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	557	Open in IMG/M
3300020581\|Ga0210399_10312722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1311	Open in IMG/M
3300021168\|Ga0210406_10657678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	812	Open in IMG/M
3300021170\|Ga0210400_10763759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	793	Open in IMG/M
3300021180\|Ga0210396_10084243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	2884	Open in IMG/M
3300021403\|Ga0210397_10196375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1440	Open in IMG/M
3300021405\|Ga0210387_11766895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	522	Open in IMG/M
3300021474\|Ga0210390_11510029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	531	Open in IMG/M
3300021479\|Ga0210410_10223661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1687	Open in IMG/M
3300021479\|Ga0210410_10273634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1515	Open in IMG/M
3300022506\|Ga0242648_1077933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	549	Open in IMG/M
3300022527\|Ga0242664_1157366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	506	Open in IMG/M
3300022531\|Ga0242660_1111443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	680	Open in IMG/M
3300022532\|Ga0242655_10055867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300022533\|Ga0242662_10214140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	612	Open in IMG/M
3300022726\|Ga0242654_10382556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	536	Open in IMG/M
3300022726\|Ga0242654_10416526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	518	Open in IMG/M
3300023030\|Ga0224561_1024025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	538	Open in IMG/M
3300024347\|Ga0179591_1093407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2904	Open in IMG/M
3300025320\|Ga0209171_10092990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1862	Open in IMG/M
3300025915\|Ga0207693_11377447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	525	Open in IMG/M
3300026318\|Ga0209471_1088315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1358	Open in IMG/M
3300026551\|Ga0209648_10571179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	627	Open in IMG/M
3300026998\|Ga0208369_1027277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300027047\|Ga0208730_1019180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	768	Open in IMG/M
3300027076\|Ga0208860_1010256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300027521\|Ga0209524_1050136	Not Available	880	Open in IMG/M
3300027583\|Ga0209527_1057176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	879	Open in IMG/M
3300027583\|Ga0209527_1057523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300027604\|Ga0208324_1156011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	620	Open in IMG/M
3300027727\|Ga0209328_10032343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1609	Open in IMG/M
3300027824\|Ga0209040_10215291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	986	Open in IMG/M
3300027846\|Ga0209180_10003430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7922	Open in IMG/M
3300027846\|Ga0209180_10285629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	947	Open in IMG/M
3300027862\|Ga0209701_10232881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1084	Open in IMG/M
3300027875\|Ga0209283_10199627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1329	Open in IMG/M
3300027882\|Ga0209590_10210445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300027882\|Ga0209590_10696375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300028047\|Ga0209526_10171831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1511	Open in IMG/M
3300028047\|Ga0209526_10365241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300028906\|Ga0308309_11657685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	543	Open in IMG/M
3300029636\|Ga0222749_10294987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	837	Open in IMG/M
3300030945\|Ga0075373_11224401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300030991\|Ga0073994_12297843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	607	Open in IMG/M
3300031047\|Ga0073995_10053060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	737	Open in IMG/M
3300031057\|Ga0170834_112669916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	650	Open in IMG/M
3300031446\|Ga0170820_16353532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1054	Open in IMG/M
3300031474\|Ga0170818_114268714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	838	Open in IMG/M
3300031754\|Ga0307475_11511816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	515	Open in IMG/M
3300031823\|Ga0307478_11122379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	656	Open in IMG/M
3300032160\|Ga0311301_10103109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5556	Open in IMG/M
3300032180\|Ga0307471_101319412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	884	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Aquatic	Environmental → Aquatic	6.84%
Plants	Host-Associated → Plants	2.56%
Fungi	Host-Associated → Fungi	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.27%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Mycelium	Host-Associated → Fungi → Mycelium	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.38%
Loam	Environmental → Terrestrial → Soil → Loam	18.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.55%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.98%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100922882	3300001545	Forest Soil	VACGSFRIEIVRSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP*
JGI12630J15595_101164711	3300001545	Forest Soil	LQSRLEEDVFAEVAATNMAIVKAMGLLASVSIDRRPYLSRILEADFLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
P5cmW16_10124712	3300001664	Permafrost	MGVTCGSFRIEIVRSETPLQSRLEENVFAEAAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
JGIcombinedJ26739_1010561972	3300002245	Forest Soil	VACGSFRIEIVRSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQTDYPNIPKRRRAAFRRKVKERYASLLRAIP*
JGIcombinedJ26739_1016973911	3300002245	Forest Soil	VACSSFRMEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVSIDRRPYLSRILEADFLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
JGIcombinedJ51221_103124351	3300003505	Forest Soil	RPITSPISKGCVSRCRFETLFFQPQVPSELKGVACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP*
Ga0062386_1004068301	3300004152	Bog Forest Soil	IVKAMGLLASVAADRRPYLSRILEAGLRDFEQIDYPDIPERRRAEFRRKVKARYARLLRAIP*
Ga0066679_101780072	3300005176	Soil	VACGSFRIEIVRSETPLQSRFEEDVFAEVAATNMAIVKAMSLLASVATDRRPYLSRILEAGLLDVEQIDYPNIPKRRRAAFRRKVKARYATLLRAIP*
Ga0066690_108669191	3300005177	Soil	MVLLELKGVACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVAADRRPYLSQILEAGLLDFEQIDYPNIPKPRRAAFRRKVKARYASLLRAIP*
Ga0070714_1022707752	3300005435	Agricultural Soil	EIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0066701_109743981	3300005552	Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVRARFADLLRTIP*
Ga0066704_109340361	3300005557	Soil	AEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLQTIP*
Ga0070762_103387952	3300005602	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP*
Ga0070763_106420781	3300005610	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKVRYASLLRAIP*
Ga0070716_1004101592	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0070765_1009080922	3300006176	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAVP*
Ga0070765_1017601552	3300006176	Soil	LQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0066665_115427872	3300006796	Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0066659_116517861	3300006797	Soil	LGSQFKEDALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLNLEQIDYPNIPKSRRTAFRRKVRAR
Ga0075433_107361952	3300006852	Populus Rhizosphere	VACGSFRIEIVRSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRPAFRRKVKARYASLLRAIP*
Ga0075434_1007010482	3300006871	Populus Rhizosphere	VACGSFRIEIVHSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRPAFRRKVKARYASLLRAIP*
Ga0073928_110000641	3300006893	Iron-Sulfur Acid Spring	ELKGVACSSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIAKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRRVKARYASLLRAVP*
Ga0073928_111281311	3300006893	Iron-Sulfur Acid Spring	RIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP*
Ga0073928_111686332	3300006893	Iron-Sulfur Acid Spring	RIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKVRYASLLRGIP*
Ga0073928_112397841	3300006893	Iron-Sulfur Acid Spring	LQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKIQARYASLLRAIP*
Ga0075424_1006380832	3300006904	Populus Rhizosphere	LQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRPAFRRKVKARYASLLRAIP*
Ga0066710_1022240472	3300009012	Grasslands Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLQTIP
Ga0099829_104920221	3300009038	Vadose Zone Soil	TNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0099830_106174592	3300009088	Vadose Zone Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP*
Ga0099830_107712371	3300009088	Vadose Zone Soil	MGLLASVSSDRRPYLSRVLEAGLLDLERIDYPNVPKRRRTAFRRKVKARFADLLRTIP*
Ga0099828_100262845	3300009089	Vadose Zone Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKIKARYADLLRTIP*
Ga0099827_102036183	3300009090	Vadose Zone Soil	LRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP*
Ga0099827_110138492	3300009090	Vadose Zone Soil	FAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0066709_1017305052	3300009137	Grasslands Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLQTIP*
Ga0099792_103251201	3300009143	Vadose Zone Soil	TLFFQPQVPSELKGVACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP*
Ga0116218_13131072	3300009522	Peatlands Soil	ARSETLLQSPLEEDLLAEVAATNMAIVKAMGLLASVAADRRPYLSRILEAGLLDFEQIDYPNIPERRRAEFRRKVKARYASLLRAIP*
Ga0116225_14801301	3300009524	Peatlands Soil	AATNMAIVKAMGLLASVAADRRPYLSRILEAGLLDFEQIDYPNIPERRRAEFRRKVKARYASLLRAIP*
Ga0116220_102060421	3300009525	Peatlands Soil	MEIARSETLLQSPLEEDLLAEVAATNMAIVKAMGLLASVAADRRPYLSRILEAGLLDFEQIDYPNIPERRRAEFRRKVKARYASLLRAIP*
Ga0127503_106186311	3300010154	Soil	ETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0074046_103955612	3300010339	Bog Forest Soil	MGVACVPYRMEVARSETPLQFRLEEDLLAEVAATNMAIVKAMGLLASVAADRRPYLSRILEAGLRDFEQIDYPDIPERRRAEFRRKVKARYARLLRAIP*
Ga0137392_105665712	3300011269	Vadose Zone Soil	AATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0137392_116028321	3300011269	Vadose Zone Soil	MASQFKEDVLAEVAATNMAIVKAMALLASVSGDRRPYRSRVLEAGLLDLEQVDYPNIPKRRRAAFRRKVKARYVDLLRTIR*
Ga0137393_100628367	3300011271	Vadose Zone Soil	AEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKIKARYADLLRTIP*
Ga0137389_100420314	3300012096	Vadose Zone Soil	FAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP*
Ga0137363_107297372	3300012202	Vadose Zone Soil	LGSQFQEDALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLRTIP*
Ga0137362_100798872	3300012205	Vadose Zone Soil	LGSQFKEDALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVRARFADLLRTIP*
Ga0137362_115878252	3300012205	Vadose Zone Soil	LGSQFQEDALAEVAATNMAIVKAMSLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLRTIP*
Ga0137380_108037052	3300012206	Vadose Zone Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRVLEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0137376_108710042	3300012208	Vadose Zone Soil	LGSQFQEDALAEVAATNMAIVKAMSLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYDDLLRTIP*
Ga0137377_106920783	3300012211	Vadose Zone Soil	ALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLRTIP*
Ga0137377_110169382	3300012211	Vadose Zone Soil	ALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0137372_101009174	3300012350	Vadose Zone Soil	MEMVRWETPLRSQLNEDVFVEVAAANMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKRRRAAFRRKVKARYADLLRTIP*
Ga0137386_103806262	3300012351	Vadose Zone Soil	MEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLTSVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0137366_101088203	3300012354	Vadose Zone Soil	LRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQINYPNIPKRRRAAFRRKVKARYADLLRTIP*
Ga0137384_101630632	3300012357	Vadose Zone Soil	LRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLQTIP*
Ga0137358_103849381	3300012582	Vadose Zone Soil	LGSQFKEDALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLRTIP*
Ga0153928_10023894	3300012677	Attine Ant Fungus Gardens	LACVSFRIEIVRSEAPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILETGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0153928_10704391	3300012677	Attine Ant Fungus Gardens	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMSLLASVATDRRPRLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKGRYASLLRAIP*
Ga0137395_105861221	3300012917	Vadose Zone Soil	LGSQFQEDALAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP*
Ga0137413_109570911	3300012924	Vadose Zone Soil	LRLYSSNRKVLSELKGVACSSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMSLLASVSSDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVKARYADLLRTIP*
Ga0120127_100209581	3300013503	Permafrost	AAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0120123_10197833	3300013770	Permafrost	VACGSFRIEIVRSETPLQSRLEENVFAEAAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0182015_105428852	3300014495	Palsa	LFFQLHILSELRGVACGSFRIEIVRSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP*
Ga0193728_10146084	3300019890	Soil	MNRLETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLGFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP
Ga0210403_112401951	3300020580	Soil	PLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0210403_112927831	3300020580	Soil	AVPYRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210399_103127222	3300020581	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFERIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210406_106576781	3300021168	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKVRYASLLRAVP
Ga0210400_107637591	3300021170	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210396_100842435	3300021180	Soil	ELYSSNRRVLSELKGVACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210397_101963751	3300021403	Soil	LQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210387_117668951	3300021405	Soil	AEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0210390_115100292	3300021474	Soil	RLYSSNLRVLSELKGVACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0210410_102236611	3300021479	Soil	GAALRLYSSNHRVLSELKGVACGSFRIEIVRSETPLQSRFEEDVFAEVAATNMAIVKAMSLLASVATDRRPYLSRILEAGLLDVEQIDYPNIPKRRRAAFRRKVKARYATLLRAIP
Ga0210410_102736342	3300021479	Soil	VACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0242648_10779331	3300022506	Soil	VACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0242664_11573661	3300022527	Soil	PLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASSLLKNSGIG
Ga0242660_11114431	3300022531	Soil	VTGSTVLWARETHSPTPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0242655_100558672	3300022532	Soil	ETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0242662_102141401	3300022533	Soil	ACSSFRIEIVGSETPLQSRLEEDVFADVAATNMAIAKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0242654_103825562	3300022726	Soil	AEVAATNMAIVKAMSLLASVATDRRPYLSRILEAGLLDVEQIDYPNIPKRRRAAFRRKVKARYATFLRAIP
Ga0242654_104165261	3300022726	Soil	VFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0224561_10240251	3300023030	Soil	VACGSFRIAIVGSETPLQSRLEEDVFAEFAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKA
Ga0179591_10934075	3300024347	Vadose Zone Soil	LGSQFKEDALAEVAATNMAIVKAMSLLASVSGDRRPYLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKVRARFADLLRTIP
Ga0209171_100929901	3300025320	Iron-Sulfur Acid Spring	LRLYSSNRKVLSELKGVACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0207693_113774471	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	CRVLLEPRGVPGGSFRVEIVSSETPLQSRLEEDVFAEVSATNMAIVKAMSLLASVATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP
Ga0209471_10883152	3300026318	Soil	VACGSFRIEIVRSETPLQSRFEEDVFAEVAATNMAIVKAMSLLASVATDRRPYLSRILEAGLLDVEQIDYPNIPKRRRAAFRRKVKARYATLLRAIP
Ga0209648_105711791	3300026551	Grasslands Soil	EDVSAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP
Ga0208369_10272771	3300026998	Forest Soil	ATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAVP
Ga0208730_10191802	3300027047	Forest Soil	VEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0208860_10102562	3300027076	Forest Soil	MAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0209524_10501361	3300027521	Forest Soil	VACGSFRIEIVRSETPLQSQLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRVGF
Ga0209527_10571761	3300027583	Forest Soil	MEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVSIDRRPYLSRILEADFLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP
Ga0209527_10575232	3300027583	Forest Soil	NMAIVKAMSLLASVATDRRPYLSRILEAGLLDVEEIDYPNIPKRRRAAFRRQVKARYATLLRAIP
Ga0208324_11560111	3300027604	Peatlands Soil	IARSETLLQSPLEEDLLAEVAATNMAIVKAMGLLASVAADRRPYLSRILEAGLLDFEQIDYPNIPERRRAEFRRKVKARYASLLRAIP
Ga0209328_100323431	3300027727	Forest Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILETGLLDFEQIDYPNIPKRRRAAFRRKVKARYASLLRAIP
Ga0209040_102152913	3300027824	Bog Forest Soil	MGVACVPYRMEVARSETPLQFRLEEDLLAEVAATNMAIVKAMGLLASVAHRRPYLSRILEAGLLDFEQIDYPDIPERRRAEFRRKVKARYARLLRAIP
Ga0209180_100034309	3300027846	Vadose Zone Soil	LRSQFNEDVVAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKIKARYADLLRTIP
Ga0209180_102856291	3300027846	Vadose Zone Soil	NRRVLSEQRAAVYVVHLMEMVRWETPLRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP
Ga0209701_102328812	3300027862	Vadose Zone Soil	LRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKIKARYADLLRTIP
Ga0209283_101996271	3300027875	Vadose Zone Soil	MAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP
Ga0209590_102104452	3300027882	Vadose Zone Soil	LRSQFNEDVFAEVAATNMAIVKAMGLLASVSSDRRPYLSRILEAGLLDLGQIDYPNIPKRRRAAFRRKVKARYADLLRTIP
Ga0209590_106963752	3300027882	Vadose Zone Soil	AIVKAMGLLASVSSDRRPYLSRILEAGLLDLEQMDYPNIPKRRRAAFRRKVKARYADLLLTTP
Ga0209526_101718311	3300028047	Forest Soil	ETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0209526_103652412	3300028047	Forest Soil	LRSQLDEDVFAEVAATNMAIVKAMGLLASVSGDRRPYLSRVLEAGLLDLEQIDYPNIPKRRRAAFRRKVKARYADLLRTIP
Ga0308309_116576852	3300028906	Soil	IVIVGSETPLQSRLEEDVFAEVAATNMAIAKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAVP
Ga0222749_102949872	3300029636	Soil	LELKGVACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPYLSRILEAGLLDFEQIDYLNIPKRRRAAFRRKVKARYASLLRAIP
Ga0075373_112244012	3300030945	Soil	VAATNMAIVKAMSLLASVATDRRPHLSRILEAGLLDFEQIDYTNIPKRRRAGFRRKVKARYGSLLRAIP
Ga0073994_122978431	3300030991	Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIAKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0073995_100530601	3300031047	Soil	LQSRLEEDVFAEVAATNMAIVKAMGLLASIATDRRPYLSRILEAGLLDFEQIDYPNIPKRRRAAFRRKVKVRYASLLRGIP
Ga0170834_1126699161	3300031057	Forest Soil	IEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFERIDYPNIPKRRRAGFRRKVKARYASLLRAIP
Ga0170820_163535322	3300031446	Forest Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMSLLASVATDRRPHLSRILEAGLLDFEQIDYTNIPKRRRAGFRRKVKARYGSLLRAIP
Ga0170818_1142687142	3300031474	Forest Soil	RIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYTNIPKRRRAGFRRKVKARYGSLLRAIP
Ga0307475_115118161	3300031754	Hardwood Forest Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMSLLASVATDRRPHLSRILEAGLLDLEQIDYPNIPKSRRTAFRRKV
Ga0307478_111223792	3300031823	Hardwood Forest Soil	VACGSFRIEIVGSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVATDRRPHLSRILEAGLLDFEQIDYPNIPKRRRAEFRRKVKTRYASLLRAIP
Ga0311301_101031097	3300032160	Peatlands Soil	MEIARSETLLQSPLEEDLLAEVAATNMAIVKAMGLLASVAADRRPYLSRILEAGLLDFEQIDYPNIPERRRAEFRRKVKARYASLLRAIP
Ga0307471_1013194121	3300032180	Hardwood Forest Soil	CRVLLELKGVACGSFRVEIVRSETPLQSRLEEDVFAEVAATNMAIVKAMGLLASVASDRRPYLSRILEAGLLDFEQIDYPNIPRRRRPAFRRKVKARYASLLRAIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences