Metagenome / Metatranscriptome Family F077717

Basic Information
Family ID	F077717
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	64 residues
Representative Sequence	MQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDAELPTEPGDGSAQRVA
Number of Associated Samples	98
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.86 %
% of genes near scaffold ends (potentially truncated)	25.64 %
% of genes from short scaffolds (< 2000 bps)	93.16 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (59.829 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (14.530 % of family members)
Environment Ontology (ENVO)	Unclassified (22.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.171 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.75% β-sheet: 0.00% Coil/Unstructured: 47.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01553	Acyltransferase	49.57
PF00440	TetR_N	35.90
PF02782	FGGY_C	3.42
PF00155	Aminotran_1_2	2.56
PF01070	FMN_dh	0.85
PF00365	PFK	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.85
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.85
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.83 %
Unclassified	root	N/A	40.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.83 %
Unclassified	root	N/A	40.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.83 %
Unclassified	root	N/A	40.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.40 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.85 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.84 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.85 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.17 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	4.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.85 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105055447	Not Available	532	Open in IMG/M
3300002568\|C688J35102_120751039	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300003993\|Ga0055468_10169008	Not Available	660	Open in IMG/M
3300004081\|Ga0063454_101861204	Not Available	528	Open in IMG/M
3300004114\|Ga0062593_100285802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300004114\|Ga0062593_100982720	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300004157\|Ga0062590_102723471	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300004463\|Ga0063356_103953176	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300004643\|Ga0062591_100192202	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300005093\|Ga0062594_100463818	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005179\|Ga0066684_10895437	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005330\|Ga0070690_100383685	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005331\|Ga0070670_101291146	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005343\|Ga0070687_101496293	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005367\|Ga0070667_101778583	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005406\|Ga0070703_10298242	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005439\|Ga0070711_101015980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300005458\|Ga0070681_11489626	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005459\|Ga0068867_100395072	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005468\|Ga0070707_100195210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1974	Open in IMG/M
3300005468\|Ga0070707_100677672	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300005538\|Ga0070731_10365484	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005546\|Ga0070696_101646575	Not Available	552	Open in IMG/M
3300005547\|Ga0070693_100945010	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005764\|Ga0066903_101629822	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300005843\|Ga0068860_101007877	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300006038\|Ga0075365_10355205	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300006046\|Ga0066652_100213667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1667	Open in IMG/M
3300006047\|Ga0075024_100284869	Not Available	805	Open in IMG/M
3300006052\|Ga0075029_100624053	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006059\|Ga0075017_100064538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2487	Open in IMG/M
3300006059\|Ga0075017_100358351	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300006059\|Ga0075017_100441924	Not Available	981	Open in IMG/M
3300006059\|Ga0075017_100466332	Not Available	955	Open in IMG/M
3300006102\|Ga0075015_100928679	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006102\|Ga0075015_101034154	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006162\|Ga0075030_100904752	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006172\|Ga0075018_10368402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300006354\|Ga0075021_10099386	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300006354\|Ga0075021_10256382	Not Available	1077	Open in IMG/M
3300006354\|Ga0075021_10682462	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006755\|Ga0079222_11572453	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006806\|Ga0079220_10671780	Not Available	754	Open in IMG/M
3300006806\|Ga0079220_10893995	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006854\|Ga0075425_101663216	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006854\|Ga0075425_102782617	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006871\|Ga0075434_100728815	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006954\|Ga0079219_10501927	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300009012\|Ga0066710_101187200	Not Available	1182	Open in IMG/M
3300009098\|Ga0105245_10010119	Not Available	8214	Open in IMG/M
3300009098\|Ga0105245_11804900	Not Available	664	Open in IMG/M
3300009101\|Ga0105247_11265721	Not Available	591	Open in IMG/M
3300009148\|Ga0105243_10209259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1716	Open in IMG/M
3300009672\|Ga0116215_1283157	Not Available	722	Open in IMG/M
3300009824\|Ga0116219_10305524	Not Available	896	Open in IMG/M
3300010375\|Ga0105239_11977389	Not Available	677	Open in IMG/M
3300010375\|Ga0105239_12907919	Not Available	559	Open in IMG/M
3300010396\|Ga0134126_11073965	Not Available	899	Open in IMG/M
3300010401\|Ga0134121_13142398	Not Available	510	Open in IMG/M
3300010403\|Ga0134123_12052953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300010880\|Ga0126350_10269853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300012200\|Ga0137382_10105579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1864	Open in IMG/M
3300012205\|Ga0137362_11558827	Not Available	547	Open in IMG/M
3300012211\|Ga0137377_10321529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300012212\|Ga0150985_104428901	Not Available	656	Open in IMG/M
3300012361\|Ga0137360_10332031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300012930\|Ga0137407_10632448	Not Available	1006	Open in IMG/M
3300012957\|Ga0164303_10541834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300012961\|Ga0164302_11102309	Not Available	627	Open in IMG/M
3300013296\|Ga0157374_11791853	Not Available	639	Open in IMG/M
3300013308\|Ga0157375_13388644	Not Available	531	Open in IMG/M
3300014501\|Ga0182024_10031647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	9036	Open in IMG/M
3300015245\|Ga0137409_10247382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1586	Open in IMG/M
3300015371\|Ga0132258_12708387	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300017959\|Ga0187779_10851814	Not Available	625	Open in IMG/M
3300017961\|Ga0187778_10094718	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300017973\|Ga0187780_10222171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300017974\|Ga0187777_10224175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300017974\|Ga0187777_10317949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300018029\|Ga0187787_10379127	Not Available	552	Open in IMG/M
3300018058\|Ga0187766_11330358	Not Available	525	Open in IMG/M
3300018482\|Ga0066669_11954252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300021432\|Ga0210384_10238651	Not Available	1636	Open in IMG/M
3300025908\|Ga0207643_10597447	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300025912\|Ga0207707_11031918	Not Available	673	Open in IMG/M
3300025918\|Ga0207662_10180194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300025922\|Ga0207646_10212510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1747	Open in IMG/M
3300025922\|Ga0207646_10948707	Not Available	762	Open in IMG/M
3300025927\|Ga0207687_10046352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3009	Open in IMG/M
3300025928\|Ga0207700_10594105	Not Available	985	Open in IMG/M
3300025935\|Ga0207709_10035120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2961	Open in IMG/M
3300026075\|Ga0207708_10921898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300027662\|Ga0208565_1139947	Not Available	709	Open in IMG/M
3300027894\|Ga0209068_10066361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1856	Open in IMG/M
3300027894\|Ga0209068_10195961	Not Available	1109	Open in IMG/M
3300027894\|Ga0209068_10410489	Not Available	773	Open in IMG/M
3300027915\|Ga0209069_10159504	Not Available	1127	Open in IMG/M
3300028380\|Ga0268265_12246691	Not Available	552	Open in IMG/M
3300028556\|Ga0265337_1180955	Not Available	572	Open in IMG/M
3300028573\|Ga0265334_10019871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	2757	Open in IMG/M
3300029984\|Ga0311332_10204137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300029984\|Ga0311332_10457616	Not Available	997	Open in IMG/M
3300029984\|Ga0311332_11645491	Not Available	522	Open in IMG/M
3300029990\|Ga0311336_11234577	Not Available	653	Open in IMG/M
3300030294\|Ga0311349_10820407	Not Available	875	Open in IMG/M
3300031170\|Ga0307498_10308072	Not Available	595	Open in IMG/M
3300031232\|Ga0302323_101970370	Not Available	663	Open in IMG/M
3300031247\|Ga0265340_10285831	Not Available	732	Open in IMG/M
3300031711\|Ga0265314_10313212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300031902\|Ga0302322_100637365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1257	Open in IMG/M
3300031902\|Ga0302322_102081320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300031944\|Ga0310884_10282279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300032160\|Ga0311301_10084205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	6466	Open in IMG/M
3300032770\|Ga0335085_10846497	Not Available	1002	Open in IMG/M
3300032954\|Ga0335083_10633300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300034195\|Ga0370501_0119108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	899	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.07%
Host-Associated	Host-Associated	23.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.68%
Plants	Host-Associated → Plants	23.93%
Aquatic	Environmental → Aquatic	15.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.09%
Sediment	Environmental → Aquatic → Sediment	14.53%
Peat	Environmental → Terrestrial → Peat	6.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.98%
Marine	Environmental → Aquatic → Marine	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.06%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	14.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1050554471	3300000364	Soil	MEVRMQTRLARSWNALRYDLSSQRALDNAARMKAEHDRLLDEIDALARRLDEAAPAATT
C688J35102_1207510393	3300002568	Soil	MQTRLARSWSALRYDLSSQRALDNAAHQRVEHDRILAEIDALACRLDAVIPAETTTPRQVA*
Ga0055468_101690082	3300003993	Natural And Restored Wetlands	MQARLARSWSALRYDLSSRRALDNASRMQHEHERLLAEIDALARRLDALVPAEPEAPAPPRVA*
Ga0063454_1018612041	3300004081	Soil	MQTRLSRSFSALRYDLSSQRALDNAGRLTAEHDRLLAEIDALAARIDAAVPDPASTEQPRRVA*
Ga0062593_1002858022	3300004114	Soil	MQTRLSRSWTALRYDLSSQRALDNAARTIAEHERLLAEIDALARRLDSAMPADAAQNVPPAQVA*
Ga0062593_1009827202	3300004114	Soil	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPDAPAPPRVA*
Ga0062590_1027234711	3300004157	Soil	MQTRLSRSWTALRYDLSSQRALDNAARTIAEHERLLAEIDALARRLDTALPADAAHTVPPAQVA*
Ga0063356_1039531761	3300004463	Arabidopsis Thaliana Rhizosphere	MQTRLARSWTALRYDLSSQRALDNAARTIAEHERLLAEIDALARRLDAALPADAAQNVPPSQQVA*
Ga0062591_1001922021	3300004643	Soil	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPEAPAPPRVA*
Ga0062594_1004638182	3300005093	Soil	MQTRLSRSWTALRYDLSSQRALDNAARTIAEHERLLAEIDALARRLDTALPADAAQNVPPAQVA*
Ga0066684_108954371	3300005179	Soil	WSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0070690_1003836852	3300005330	Switchgrass Rhizosphere	MQTRLARSWSSLRYDLSSQRALDNAARLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA*
Ga0070670_1012911462	3300005331	Switchgrass Rhizosphere	MQARLARSWSALRYDLSLRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPDAPAPPRVA*
Ga0070687_1014962932	3300005343	Switchgrass Rhizosphere	MQTRLARSWSALRYDLSSQRALDNAAHAMVEHDRLLAEIDALARRLDEVAPPETAASS
Ga0070667_1017785831	3300005367	Switchgrass Rhizosphere	MQTRLARSWSALRYDLSSQRALDNAAHAIAEHDRLLAEIDALARRLDEVAPPE
Ga0070703_102982421	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA*
Ga0070711_1010159802	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARLHIEHERLLAQVDALARRLDAVIPLEPEVGPPARVA*
Ga0070681_114896262	3300005458	Corn Rhizosphere	MQARLARSWSSFRYDLSSQRALDNASRLQLEHDRLLAEIDALARRLDDALPAVPETDAPRVA*
Ga0068867_1003950722	3300005459	Miscanthus Rhizosphere	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVMPAEPDAPAPPRVA*
Ga0070707_1001952102	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARTKAEHDRLLAEIDALARRLDTELPTAPGDGSVQRVA*
Ga0070707_1006776722	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARMQIEHERLLAEIDALARRLDAELPAEPDDTAAPRVA*
Ga0070731_103654841	3300005538	Surface Soil	MQTRLARSWSALRYDLSSQRALDNAARMRAEHDRLLAEIDALARRLDAELPVEPGDGSVPRVA*
Ga0070696_1016465751	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARTQLEHDRLLAEVDALARRLDAVLPVEPEAAPAARVA*
Ga0070693_1009450101	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPEA
Ga0066903_1016298222	3300005764	Tropical Forest Soil	MQARLARSWSSLRYDLSSQRALDNAARMKAEHDRLLAEIDALERRLDCELPTEPGDGSAQRVA*
Ga0068860_1010078772	3300005843	Switchgrass Rhizosphere	GPMQTRLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDAELPIEPGDGAAPRVA*
Ga0075365_103552052	3300006038	Populus Endosphere	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEP
Ga0066652_1002136672	3300006046	Soil	MQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0075024_1002848692	3300006047	Watersheds	MQTRLSRSFTSLRYDLSSQRAVDNASRLKAEHDRLLAEIDALAARIDAAAPAPPAVVASQRVA*
Ga0075029_1006240532	3300006052	Watersheds	MQTRLARSFTALRYGLSSQRALDNASRLTAEHDRLLAEIDALAARIDAAVPPRADDVT
Ga0075017_1000645382	3300006059	Watersheds	MQTSLARSWSALRYDLSSQRALDNAAKMKVEHDRLLAEIDALAARLDAALPAEPEQPAVQPAQRVA*
Ga0075017_1003583512	3300006059	Watersheds	MQTRLARSFTALRYGLSSQRALDNASRLTAEHDRLLAEIDALAARIDAAVPPRADDVTQRVA*
Ga0075017_1004419242	3300006059	Watersheds	MQTRLTRSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAVRLDAALPAPSAVEPAESGGSAQRVA*
Ga0075017_1004663321	3300006059	Watersheds	MQTRFARSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAVRLDAALPDPPAVEPPGETGESAQRVA*
Ga0075015_1009286791	3300006102	Watersheds	APMEVRMQTRLTRSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAVRLDAALPAPSAVEPAESGGSAQRVA*
Ga0075015_1010341542	3300006102	Watersheds	PMEVRMQTRLARSFTALRYGLSSQRALDNASRLTAEHDRLLAEIDALAARIDAAVPPRADDVTQRVA*
Ga0075030_1009047521	3300006162	Watersheds	MQTSLARSWSALRYDLSSQRALDNAAKMKVEHDRLLAEIDALAVRLDAALPAEPEQPAVQPAQRVA*
Ga0075018_103684022	3300006172	Watersheds	LRYDVSSQRAVDNAAQMRLEHDRLLAEIDALARRLDAEIPAARADATPRVA*
Ga0075021_100993862	3300006354	Watersheds	MQTRLARSFTSLRYDLSSKRALDNASRLTAEHDRLLAEIDALAARIDAAAPAASTEVSRRVA*
Ga0075021_102563821	3300006354	Watersheds	CRWRSRMQTRLARTWTALRYDLSSQRALDNASRMRVEHDRLLAEIDALAERLDAVVAPEPVVVLPVEPAARVARPAQRVA*
Ga0075021_106824622	3300006354	Watersheds	MQTRFARSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAERLDAALPAPPAVGSPAESGGSAQRVA*
Ga0079222_115724531	3300006755	Agricultural Soil	MQARLPRSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDAVPSAPPDGSAQRVA*
Ga0079220_106717801	3300006806	Agricultural Soil	MQARLPRSWSSLRYDVSSQRALDNAARMHTEHDRLLAEIDALARRLDAVPSAPPDGSAQRVA*
Ga0079220_108939951	3300006806	Agricultural Soil	MQTRLARSWSSLRYDLSSQRALDNAARMQAEHVRLLAEIDALARRLDADLPTEPGDGSAQRVA*
Ga0075425_1016632161	3300006854	Populus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNASRVQREHDRLLAEIDALARRLDAELPVVEPDSTTAPRVA*
Ga0075425_1027826171	3300006854	Populus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARMQAEHVRLLAEIDALARRLDSELPIAPDDGSAQRVA*
Ga0075434_1007288152	3300006871	Populus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARMQAEHVRLLAEIDALARRLDSELPIAPGDGSARRVA*
Ga0079219_105019272	3300006954	Agricultural Soil	MQTRLARSWSALRYDLSSQRALDNAARMRAEHDRLLAEIDALARRLDAELPVEPGEGSVPRVA*
Ga0066710_1011872003	3300009012	Grasslands Soil	MQARLARSWSSLRYDLSSQRALDNAARMQAEHVRLLAEIDALARRLDSELPIAPDDGSAQRVA
Ga0105245_100101199	3300009098	Miscanthus Rhizosphere	LRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA*
Ga0105245_118049001	3300009098	Miscanthus Rhizosphere	ALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPEAPAPPRVA*
Ga0105247_112657211	3300009101	Switchgrass Rhizosphere	MERPMQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA*
Ga0105243_102092593	3300009148	Miscanthus Rhizosphere	LRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTELPTAPGDSSAQRVA*
Ga0111538_102003254	3300009156	Populus Rhizosphere	MPMEVRMQTRLARSWSALRYDLSSQRALDNAAHAMVEHDRLLAEIDALARRLDEVAPPETAASSAPPEPT
Ga0116215_12831572	3300009672	Peatlands Soil	MEVRMQTRLARSWSALRYDLSSQRALDNAAKMLDEHDRLLAEIDALAARLDAALPPASTSGPPGSTQRVA*
Ga0116219_103055242	3300009824	Peatlands Soil	MEVRMQTRLARSWSALRYDLSSQRALDNAAKILDEHDRLLAEIDALAARLDAALPPASTSGPPGSTQRVA*
Ga0105239_119773891	3300010375	Corn Rhizosphere	SRNFRVDPMERPMQARLARSWSSLRYDLSSQRALDNAARTKAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA*
Ga0105239_129079191	3300010375	Corn Rhizosphere	SWTALRYDLSSQRALDNAAATLAEHDRLLAEIDALARRLDEVAPAASTDGDAAIERHARDVA*
Ga0134126_110739651	3300010396	Terrestrial Soil	WSALRYDVSSQRALDNAARQRSEHDRIVAEIDALASRLDAVVPPKPAAGAQRVA*
Ga0134121_131423981	3300010401	Terrestrial Soil	MEVRMQTRLARSFTSLRYDLSSRRALDNASRLTAEHDRLLAEIDALAARIDAAAPPQAAGDASQRVA*
Ga0134123_120529531	3300010403	Terrestrial Soil	MQTRIGRSWTALRYDLSSQRALDNAARLKVEHERLLAEIDALARRLDDAIPV
Ga0126350_102698531	3300010880	Boreal Forest Soil	MEVRMQTRLGRSWSALRYDLSSQRALDNAAKMLVEHDRLLAEIDALAARLDTALRPESPAAPPSTQRVA*
Ga0137382_101055793	3300012200	Vadose Zone Soil	MERPMQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0137362_115588271	3300012205	Vadose Zone Soil	LRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0137377_103215292	3300012211	Vadose Zone Soil	MERPMQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDELARRLDTVLPIEPGDGSAQRVA*
Ga0150985_1044289011	3300012212	Avena Fatua Rhizosphere	LDSREFDDLPMEVRMQTRLARSWSALRYDLSSQRALDNAAHQRVEHDRILAEIDALACRLDAVIPAETTTPRQVA*
Ga0137360_103320312	3300012361	Vadose Zone Soil	LRYDLSSQRALDNAARMRAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0137407_106324482	3300012930	Vadose Zone Soil	VRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA*
Ga0164303_105418342	3300012957	Soil	MQTRIGRSWTALRYDLSSQRALDNAARLKVEHERLLAEIDALARRPDDAMPIEAAPVAAPEAAHA
Ga0164302_111023092	3300012961	Soil	MEVRMQTRIGRSWTALRYDLSSQRALDNAARLKVEHERLLAEIDALARRLDDAIPIEAAPEAASEA
Ga0157374_117918532	3300013296	Miscanthus Rhizosphere	MQTRLARSWSALRYDLSSRRALDNASRMQAEHERILAEIDALALRLDAALPAVEPDAARPRVA*
Ga0157375_133886442	3300013308	Miscanthus Rhizosphere	MQTRIGRSWTALRYDLSSQRALDNAARMKVEHERLLAEIDALARRLDDAMPIEAAPEAAP
Ga0182024_100316478	3300014501	Permafrost	MEVRMQTRLARSWSALRYDLSSQRALDNAAKMLVEHDRILAEIDALAARLDAALPAEPTAPAGAQPTQRVA*
Ga0137409_102473822	3300015245	Vadose Zone Soil	LRYDLSSQRALDNAARAIVEHERLLAEIDALARRIDAALPADDSQNPASSQQVA*
Ga0132258_127083872	3300015371	Arabidopsis Rhizosphere	MERPMQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTELPTAPGDRSAQRVA*
Ga0187779_108518141	3300017959	Tropical Peatland	MQDWMQTRLARSLSALRYDLSSQRARDNASRMLLEHDRLLAEIDALARRLDAAMPPEPARPPAPVRAAAGDFDDVDVAAPRVA
Ga0187778_100947183	3300017961	Tropical Peatland	MQDWMQTRLARSLSALRYDLSSQRARDNASRMLLEHDRLLAEIDALARRLDAAMPPEPARPPAPVRAAAEDFGDVDVAAPRVA
Ga0187780_102221713	3300017973	Tropical Peatland	MQDWMQTRLARSLSALRYDLSSQRARDNASRMLLEHDRLVAEIDALARRLDAAMPPEPAPERSA
Ga0187777_102241752	3300017974	Tropical Peatland	MQDWMQTRLARSLSALRYDLSSQRARDNASRMLLEHDRLLAEIDALARRLDAAMPPEPARPPAPVRAANEDFGDDVAAPRVA
Ga0187777_103179492	3300017974	Tropical Peatland	MQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDAELPTEPGDGSAQRVA
Ga0187787_103791272	3300018029	Tropical Peatland	MQTRLARSWSALRYDLSSQRALDNASKMQVEHDRLLAEIDAPAVRLDAALPPEAEP
Ga0187766_113303581	3300018058	Tropical Peatland	RYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTELPTASGDGAAQRVA
Ga0066669_119542522	3300018482	Grasslands Soil	MQARLARSWSSLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA
Ga0210384_102386512	3300021432	Soil	MQTRLGRSWSSLRYDLSSQRALDNAAKMLVEHDRLLAEIDALASRLDAALPPETSAAPPSTQRVA
Ga0207643_105974472	3300025908	Miscanthus Rhizosphere	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPEAPAPPRVA
Ga0207707_110319182	3300025912	Corn Rhizosphere	MQARLARSWSSFRYDLSSQRALDNASRLQLEHDRLLAEIDALARRLDDALPAVPETDAPRVA
Ga0207662_101801943	3300025918	Switchgrass Rhizosphere	PMERPMQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA
Ga0207646_102125102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARTKAEHDRLLAEIDALARRLDTELPTAPGDGSVQRVA
Ga0207646_109487071	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQARLARSWSSLRYDLSSQRALDNAARMQIEHERLLAEIDALARRLDAELPAEPDDTAAPRVA
Ga0207687_100463522	3300025927	Miscanthus Rhizosphere	MQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDTEAPTAPGDGSAQRVA
Ga0207700_105941051	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRLARSWSSLRYDLSSQRALDNAARMKAEHDRLLAEIDALARRLDAEFPIEPGDGSAQRVA
Ga0207709_100351202	3300025935	Miscanthus Rhizosphere	MQTRLARSWSSLRYDLSSQRALDNATRLQAEHDRLLAEIDALARRLDAVVPAEPEAPAPPRVA
Ga0207708_109218981	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRIGRSWTALRYDLSSQRALDNAARLKVEHERLLAEIDALARRLDDAIPIE
Ga0208565_11399472	3300027662	Peatlands Soil	MQTRLARSWSALRYDLSSQRALDNAAKMLDEHDRLLAEIDALAARLDAALPPASTSGPPGSTQRVA
Ga0209068_100663611	3300027894	Watersheds	MQTRLARTWTALRYDLSSQRALDNASRMRVEHDRLLAEIDALAERLDAVVAPEPVVVLPVEPAARVARPAQRVA
Ga0209068_101959612	3300027894	Watersheds	MEVRMQTRLARSFTSLRYDLSSKRALDNASRLTAEHDRLLAEIDALAARIDAAAPAASTEVSRRVA
Ga0209068_104104892	3300027894	Watersheds	MQTRFARSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAERLDAALPAPPAVGSPAESGGSAQRVA
Ga0209069_101595042	3300027915	Watersheds	MQTRLSRSFTSLRYDLSSQRAVDNASRLKAEHDRLLAEIDALAARIDAAAPAPPAVVASQRVA
Ga0268265_122466911	3300028380	Switchgrass Rhizosphere	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPVEPEAPAPPRVA
Ga0265337_11809552	3300028556	Rhizosphere	MQTRLARSWSALRYDLSSQRALDNASHTRTEHDRLLAEIDALARRLDAEVPAVSAPARKV
Ga0265334_100198713	3300028573	Rhizosphere	MQTRFARSWSALRYDLSSQRAVDNASKMQKEHDRLLAEIDALAVRLDAALPAEATGQQAAGSGEPAQRVA
Ga0311332_102041372	3300029984	Fen	MQTRLARSWSALRYDISSQRAVDNAAQMRRDHDRLLAEIDALAGRLDAVIPAESAVPAPRVA
Ga0311332_104576161	3300029984	Fen	QTRLARSWSALRYDISSQRAVDNAAHLRLEHDRLLAEIDALARRLDAEIPVAVAVPARYV
Ga0311332_116454912	3300029984	Fen	MQTRLARSWSALRYDVSAQRALDNAARARAQHDRILAEIDALASRLDLMSAPVPPVAPAAVAHQVA
Ga0311336_112345772	3300029990	Fen	MEVRMQTRLARSWSALRYDLSSQRALDNASHMRTEHDRLLAEIDALARRLDAEIPVAVAVPARYVA
Ga0311349_108204072	3300030294	Fen	MEVRMQTRLARSWSALRYDISSQRAVDNAAQMRRDHDRLLAEIDALAGRLDAVIPAESAVPAPRVA
Ga0307498_103080721	3300031170	Soil	MQARLPRSWSTLRYDLSSQRALDNAARMQAEHDRLLAEIDALARRLDTVLPIEPGDGSAQRVA
Ga0302323_1019703701	3300031232	Fen	SREFGDLPMEVRMQTRLARSWSALRYDISSQRAVDNAAQMRRDHDRLLAEIDALAGRLDAVIPAESAVPAPRVA
Ga0265340_102858311	3300031247	Rhizosphere	MQTRFARSWSALRYDLSSKRAVDNASKMQKEHDRLLAEIDALAVRLDAALPPAPAVEPPAGSGESAQRVA
Ga0265314_103132121	3300031711	Rhizosphere	MQTRLARSWTALRYDLSSQRALDNAARQIAEHDRLIAEIDALARRLDDALPAASADRQSSQQVA
Ga0302322_1006373653	3300031902	Fen	REFGDLPMEVRMQTRLARSWSALRYDISSQRAVDNAAQMRRDHDRLLAEIDALAGRLDAVIPAESAVPAPRVA
Ga0302322_1020813202	3300031902	Fen	MQTRLARSWSALRYDLSSQRALDNASHMLTERDRLLAEIDALARRLDAEIPVAVAVPARYVA
Ga0310884_102822792	3300031944	Soil	MQARLARSWSALRYDLSSRRALDNASRMQHEHDRLLAEIDALARRLDAVVPAEPEAPAPPHVA
Ga0311301_100842053	3300032160	Peatlands Soil	MQTRLARSWSALRYDLSSQRALDNAAKMLVEHDRLLAEIDALAARLDAALRPEPTTAPAPSTQRVA
Ga0335085_108464971	3300032770	Soil	MQARLARSWSSLRYDLSSRRALDNAARMRAEHDRLLAEIDALARRLDAELPSEPGDGAAQRVA
Ga0335083_106333002	3300032954	Soil	MQLRLARSWSAFRYDVSSQRALDNAARQREEHDRILAEIDALAARLDAVVAPDAEAPEGRQVA
Ga0370501_0119108_214_438	3300034195	Untreated Peat Soil	MEVRMQTRFARSFSALRYDLSSQRALDNAAKMQVEHDRLLAEIDALAVRLDAAVPAPAHGQAPGEARGPAQRVA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077717

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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