Metagenome Family F077740

Basic Information
Family ID	F077740
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	82 residues
Representative Sequence	LGELLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRLFPDNSELKRLNLML
Number of Associated Samples	95
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.72 %
% of genes near scaffold ends (potentially truncated)	95.73 %
% of genes from short scaffolds (< 2000 bps)	91.45 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.86

Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (26.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.427 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.47% β-sheet: 0.00% Coil/Unstructured: 46.53%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.82789
a.118.8.0: automated matches	d5lypa1	5lyp	0.82403
a.118.8.1: Tetratricopeptide repeat (TPR)	d1a17a_	1a17	0.82377
a.118.8.1: Tetratricopeptide repeat (TPR)	d2vyia_	2vyi	0.82263
a.118.8.1: Tetratricopeptide repeat (TPR)	d1elwa_	1elw	0.82121

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13490	zf-HC2	8.55
PF14534	DUF4440	6.84
PF13414	TPR_11	2.56
PF14559	TPR_19	2.56
PF13701	DDE_Tnp_1_4	1.71
PF00199	Catalase	1.71
PF16916	ZT_dimer	1.71
PF07690	MFS_1	0.85
PF10431	ClpB_D2-small	0.85
PF01435	Peptidase_M48	0.85
PF07719	TPR_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0753	Catalase	Inorganic ion transport and metabolism [P]	1.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.90 %
Unclassified	root	N/A	7.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Azoarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Azoarcus	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
unclassified Azoarcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Azoarcus → unclassified Azoarcus	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.56 %
Azoarcus sp. KH32C	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Azoarcus → unclassified Azoarcus → Azoarcus sp. KH32C	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10370940	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300002245\|JGIcombinedJ26739_100798559	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300002245\|JGIcombinedJ26739_101235543	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300004091\|Ga0062387_100874704	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300004092\|Ga0062389_100337889	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300004635\|Ga0062388_100666170	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005439\|Ga0070711_100392642	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300005538\|Ga0070731_10792430	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300005538\|Ga0070731_10833292	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005541\|Ga0070733_10329734	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005591\|Ga0070761_11005488	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005602\|Ga0070762_10396702	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005610\|Ga0070763_10818980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Azoarcus → unclassified Azoarcus → Azoarcus sp. KH32C	551	Open in IMG/M
3300005614\|Ga0068856_101844245	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300006050\|Ga0075028_100022547	All Organisms → cellular organisms → Bacteria	2798	Open in IMG/M
3300006057\|Ga0075026_100337019	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300006059\|Ga0075017_100087198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2157	Open in IMG/M
3300006059\|Ga0075017_100781544	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300006059\|Ga0075017_101440869	Not Available	542	Open in IMG/M
3300006162\|Ga0075030_100136734	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300006172\|Ga0075018_10034834	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300006174\|Ga0075014_100292551	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006174\|Ga0075014_100957750	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300007265\|Ga0099794_10694380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300009029\|Ga0066793_10666467	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300009143\|Ga0099792_10946089	Not Available	573	Open in IMG/M
3300009177\|Ga0105248_11582474	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300009521\|Ga0116222_1158050	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300009700\|Ga0116217_10209357	All Organisms → cellular organisms → Bacteria → Acidobacteria	1279	Open in IMG/M
3300010379\|Ga0136449_100379124	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300010379\|Ga0136449_102110008	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300010396\|Ga0134126_12065645	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300011269\|Ga0137392_11215583	Not Available	612	Open in IMG/M
3300011270\|Ga0137391_10969957	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300011271\|Ga0137393_10364001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1236	Open in IMG/M
3300012207\|Ga0137381_11529233	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300012208\|Ga0137376_10752426	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300012210\|Ga0137378_11737787	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012357\|Ga0137384_10695236	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012363\|Ga0137390_11509234	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300012363\|Ga0137390_11578166	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012363\|Ga0137390_11987685	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300012582\|Ga0137358_10321177	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300012685\|Ga0137397_11323389	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300012685\|Ga0137397_11337318	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300012922\|Ga0137394_10977824	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300012924\|Ga0137413_10557588	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300012925\|Ga0137419_11161343	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300012929\|Ga0137404_12209678	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300014151\|Ga0181539_1290545	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300014159\|Ga0181530_10087505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1895	Open in IMG/M
3300014162\|Ga0181538_10230245	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300014495\|Ga0182015_10797692	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014968\|Ga0157379_11239430	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300014969\|Ga0157376_10706951	Not Available	1013	Open in IMG/M
3300015054\|Ga0137420_1195488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1484	Open in IMG/M
3300015241\|Ga0137418_10146562	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300015241\|Ga0137418_10159397	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300017925\|Ga0187856_1070892	All Organisms → cellular organisms → Bacteria → Acidobacteria	1453	Open in IMG/M
3300017926\|Ga0187807_1308005	Not Available	527	Open in IMG/M
3300017927\|Ga0187824_10083266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300017936\|Ga0187821_10170624	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300017936\|Ga0187821_10375317	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300017948\|Ga0187847_10620984	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300018006\|Ga0187804_10107468	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300019786\|Ga0182025_1066425	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300019786\|Ga0182025_1100140	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300020581\|Ga0210399_10429682	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300020581\|Ga0210399_11043789	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300020581\|Ga0210399_11065519	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300020582\|Ga0210395_10750414	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300020583\|Ga0210401_10736770	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300020583\|Ga0210401_11503131	Not Available	531	Open in IMG/M
3300021170\|Ga0210400_10611938	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300021178\|Ga0210408_11148138	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021180\|Ga0210396_10193803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1817	Open in IMG/M
3300021403\|Ga0210397_11012706	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300021406\|Ga0210386_11078293	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300021420\|Ga0210394_10791835	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300021432\|Ga0210384_10582500	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300021433\|Ga0210391_10281828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1304	Open in IMG/M
3300021477\|Ga0210398_10598072	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300021479\|Ga0210410_10401922	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300021479\|Ga0210410_10988682	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300021479\|Ga0210410_11047059	Not Available	705	Open in IMG/M
3300021559\|Ga0210409_10393284	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300021560\|Ga0126371_13399646	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300024330\|Ga0137417_1286573	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300025913\|Ga0207695_11192323	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300025916\|Ga0207663_10319084	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300026320\|Ga0209131_1024992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3548	Open in IMG/M
3300026355\|Ga0257149_1064589	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300026376\|Ga0257167_1067152	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300026507\|Ga0257165_1006338	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300026557\|Ga0179587_10542555	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300027439\|Ga0209332_1076260	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300027641\|Ga0208827_1092562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300027671\|Ga0209588_1020149	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300027862\|Ga0209701_10075722	All Organisms → cellular organisms → Bacteria → Acidobacteria	2124	Open in IMG/M
3300027867\|Ga0209167_10188562	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300027867\|Ga0209167_10591969	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300027869\|Ga0209579_10542794	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300027869\|Ga0209579_10602743	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027884\|Ga0209275_10103258	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300027898\|Ga0209067_10380017	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300027908\|Ga0209006_10882768	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300027911\|Ga0209698_10666636	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300031708\|Ga0310686_117010830	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031708\|Ga0310686_118011560	All Organisms → cellular organisms → Bacteria → Acidobacteria	5196	Open in IMG/M
3300031708\|Ga0310686_118865295	Not Available	525	Open in IMG/M
3300031715\|Ga0307476_10851779	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300032160\|Ga0311301_11658188	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300032174\|Ga0307470_11127547	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300032515\|Ga0348332_12882706	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300032892\|Ga0335081_10608776	All Organisms → cellular organisms → Bacteria → Acidobacteria	1346	Open in IMG/M
3300032892\|Ga0335081_11056868	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.21%
Aquatic	Environmental → Aquatic	20.51%
Plants	Host-Associated → Plants	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.36%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Sediment	Environmental → Aquatic → Sediment	9.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.42%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.40%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.40%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103709402	3300001593	Forest Soil	PHLEFVMRYFPDEDEKIYPLLFQTDKALGDPSAAAKAVRFGLRMFPDNSELKRLNLLLGRTGFSLSVFGF*
JGIcombinedJ26739_1007985592	3300002245	Forest Soil	LAQLAEILQREDKQDEAYRAMLDCLAQDPYNYQTQLNLGELLAKQKKWAEARQHLEFVMRYFPDEYSGTYSLLFQADKALGDPSAAAKAVRFGLRMFPGDSELQRLNLLL*
JGIcombinedJ26739_1012355432	3300002245	Forest Soil	AQLAEILLRENKPDESYRAMLDCLSADPYNYQTQLNLGKLLAQQGKWREARQHLEFVMRYYPDEDSGIYPLLFQVDKALGDPASAAKAVRFGLRLFPDNSELKRLNLLL*
Ga0062387_1008747042	3300004091	Bog Forest Soil	YQTQLNLGELLARQKKWAEARQHLEFVMRYFPDEDSGIYSLLFRADQAVGDPSAAAKAVRFGLRMFPDNSELQRLNSML*
Ga0062389_1003378893	3300004092	Bog Forest Soil	GHLEFMMRFYPDQDSGIYPLLHQADIALGDPAAATKAVRFGLRIFPDNSELKRLNLK*
Ga0062388_1006661701	3300004635	Bog Forest Soil	LEFMMRFYPDQDSGIYPLLHQADIALGDPAAATKAVRFGLRIFPDNSELKRLNLK*
Ga0070711_1003926421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NLGSLLARQKKWDEARKHLELVRRYFPDSDAGTYTLLFEIDNALGDPRGAADAVRFGLRMFPGNSELLRLTLIH*
Ga0070731_107924301	3300005538	Surface Soil	SAELGEILLREGKLDEAYRAMLNCLAQDPYNYQSQRNLGELLAGQKKWAEARQHLEFVMRFYPDEDSGIYPLLFQADKALGDPSAAAKAVRFGLRVFPDNSDLQRLNLLL*
Ga0070731_108332921	3300005538	Surface Soil	FPDEDSGIYPLLYQADEALGDPRAATRAVRFGLRLFPDNSELQRLNLLL*
Ga0070733_103297342	3300005541	Surface Soil	RPHLEFVVQYFPDQDSGIYPLLYQADRALRDPSAAAKAVRFGLRMFPDNLELRRLNLLLGRTGFSLSLFGL*
Ga0070761_110054881	3300005591	Soil	KWAEAREHLEFVMRYYPDEDSGIYPLLFQIDRTLGDPSAAAKAVRLGMRLFPDNSELKRLN*
Ga0070762_103967022	3300005602	Soil	ELLARQKKWAEARPHLEFVMRYFPDEDSGIYPLLYQADQALGDPSSAANAARFGLRLFPENSELRRLNLLL*
Ga0070763_108189801	3300005610	Soil	AYRAMLDCLAQDPYNYQTQLNLGELLAKQKKWAEARQHLEFVMRYFPDEYSGTYSLLFQADKALGDPSAAAKAVRFGLRMFPGDSELQRLNLLL*
Ga0068856_1018442452	3300005614	Corn Rhizosphere	LSHQKKWAEARPHLEFVKRHYPDGDAETYTLLYEIDQALGDRRAAADAVRFGLRIFPDNSELLRLNLLP*
Ga0075028_1000225474	3300006050	Watersheds	HLDLGELLAKQNKWAEARKHLEFVMTYFPDEDSGIYPLLFQADKALGDPSAAAKAVRFGLRMFPDNSELQRLNLLL*
Ga0075026_1003370192	3300006057	Watersheds	QTQRNLGELLATQKKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPGNSELQRLNLLLGRTGFSLSLFGL*
Ga0075017_1000871981	3300006059	Watersheds	LEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPGNSELKRLNLLLGRTGFNLSLFGH*
Ga0075017_1007815442	3300006059	Watersheds	YFPDEDSGIYPLLYQADQALNDPRAATKAVRFGLRLFPDNSELQRLNLMQGRTGFSLSFLGL*
Ga0075017_1014408691	3300006059	Watersheds	YQAHLDLGELLAKEKKWAEARKHLEFVMRYFPDEDSVIYPLLFQADAALGDPAAAGKAIRFGLRVFPDNSELRRLNMLR*
Ga0075030_1001367341	3300006162	Watersheds	LNLGELLARQEKWAEARQHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPGNSELKRLNLLLGRTGFNLSLFGH*
Ga0075018_100348341	3300006172	Watersheds	LARQEKWAEARQHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPGNSELKRLNLLLGRTGFNLSLFGH*
Ga0075014_1002925512	3300006174	Watersheds	AQLGEILMREDKLDEAYQAMLDCLAQDPYNYQTQLNLGELLARQKKWAEARPHLEFVMRYFPDEDSGIYPLLFQADQALGDPSAAAKAVRFGLRLFPENSELRRLNLLL*
Ga0075014_1009577502	3300006174	Watersheds	AYNYQAHLDLGELLAKENKWAEARKHLEFVMRYFPDENAGIYALLFRADKTLGDPAAAAKAIRFGLRLFPDNSELQRLNMVR*
Ga0099794_106943801	3300007265	Vadose Zone Soil	NLGELLYRQKKWTEARQHLEFVRRYFPDGDPDTYSLLYEVDNALGDPRAAADAIRFGLRIFPNNVNLQRLNFRL*
Ga0066793_106664671	3300009029	Prmafrost Soil	PYNYQTQLNLGKLLAKQNKWMEARQHLEFVMRYFPDQDEIIYPLLFQADKALGDPSAAAKAVRFGLRMFPDNSELQRLNLLL*
Ga0099792_109460891	3300009143	Vadose Zone Soil	MLDCLALDPYNYQTQLNLGELLARQEKWAEARQHLEFVMRYFPDEDEKIYPLLFQADKALGDSSAAAKAVRFGLRIFPGNSELLRLNLLL*
Ga0105248_115824742	3300009177	Switchgrass Rhizosphere	QDSISRDPYNFQSRMNLGELLSHQKKWAEARPHLEFVKRHYPDGDAETYTLLYEIDQALGDRRAAADAVRFGLRIFPDNSELLRLNLLP*
Ga0116222_11580502	3300009521	Peatlands Soil	YRAMLDCLAEDPYNYQTQLNLGELLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRLFPDNSELKRLNLML*
Ga0116216_100462421	3300009698	Peatlands Soil	AGAAALARLAEILMREDKRDEAYQAMLDCLAQDPYNYQTQLNLGELLARQKKWAKARPHREFVMRYFPDQDSGIYPLLYQADQALGDPSAAAKAVRFGLRMFPENLELQRLNLLLSRTGFSLSLFGL*
Ga0116217_102093572	3300009700	Peatlands Soil	GAYQTMLDCLAQDPYNYQTQLNLGELLARQKKWAKARPHLEFVMRYFPDQDSGIYPLLYQADQALGDPSAAAKAVRFGLRMFPENLELQRLNLLLSRTGFSLSLFGL*
Ga0136449_1003791242	3300010379	Peatlands Soil	LLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRLFPDSSELKRLNLLL*
Ga0136449_1021100082	3300010379	Peatlands Soil	EARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPAVAAKAVRFGLRLFPDNSELKRLNLLLGRTGFSLSGLGL*
Ga0134126_120656451	3300010396	Terrestrial Soil	DVDHAYHAMQDCLARDPYNFQTQINLGELLYRQKKWAEARQHLEFVKRFFPDGDVNTYVILYEVDTALGDRRAAADSVRFGLRLFPDDSSLQRLNRLL*
Ga0137392_112155831	3300011269	Vadose Zone Soil	GKTDEAFHAMLDCLAQDPYNFQTHRNFAELLAKQEKWSEARQHLESVMRYFPDEDPGIYPLLYRADLALGDPSAATKAVRFGLRMFPGDSELQRLNLLLSRPGFSLSGFRW*
Ga0137391_109699571	3300011270	Vadose Zone Soil	NYQTQLNLGELLYRQKNWAEARQHLEFVMRYFPDEDSGIYPLLFQADRALGDPSAAAKAVRFGLRVFPDNSELRRLNLLL*
Ga0137393_103640012	3300011271	Vadose Zone Soil	MEDCLARDPYNFQTHLNLGSLLRTQKKWAEARHHLEFVRRYFPDSDVGTYTLLFEVDNALGDPRAAAEAVRFGLRMFPGNSDLQRLTLIH*
Ga0137381_115292331	3300012207	Vadose Zone Soil	FQTQLNLGALLRQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137376_107524261	3300012208	Vadose Zone Soil	NFQTQINLGELLYRQKKWAEAREHLEFVRRFFPDSDAETYSLLYEVDNALGDPRAAADAVRFGLRIFPDNSSLQRLNLLR*
Ga0137378_117377872	3300012210	Vadose Zone Soil	CLERDPYNYRAHFDLGLLLRQQKKWAEARQHLEFVKRYFPDVDERSYTFLFEVNNALGDPRAAADAARFGQRMFPDNSDLKRLTLIH*
Ga0137384_106952361	3300012357	Vadose Zone Soil	LDPYNFQTQLNLGELLARQEKWAEARQHLEFVMRYFPDEDEKIYPLLFQADKALGDSSAAANAVRFGLRIFPGNWELQRLNLLLGRRGLRLSLFGL*
Ga0137390_115092341	3300012363	Vadose Zone Soil	CLALDPYNYKTQLNLGELLAKQTKWAEARPHLEFVMRYFPDEDEKIYPLLFQADKAMGDPSAAAKAVRFGLRMFPDNSELQRLNLLL*
Ga0137390_115781662	3300012363	Vadose Zone Soil	ESVMRYFPDQDPGIYPLLYRADLASGDPSAATKAVRFGLRMFPGDSELQRLNLLLSRAAFRLSGFRW*
Ga0137390_119876852	3300012363	Vadose Zone Soil	LAKQTKWAEARPHLEFVMRYFPDEDSGIYPLLFQADRALGDPSAAAKAVRFGLRVFPDNSELRRLNLLL*
Ga0137358_103211771	3300012582	Vadose Zone Soil	AMEDCLARDPYNFQTHLNLGSLLRTQKKWAEARLHLEFVRRYFPDSDVGTYTLLFEVDNALGDPRAAAEAVRFGLRMFPGNSDLQRLTLIH*
Ga0137397_113233891	3300012685	Vadose Zone Soil	RAYRAMQDCLARDPYNFQTQLNLGALLHQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137397_113373181	3300012685	Vadose Zone Soil	PYNFQTQLNLGALLHQQKKWAEARLHLEFVKRYFPDSDAGAYTLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137394_109778241	3300012922	Vadose Zone Soil	RDPYNFQTQLNLGALLHQQKKWAEARLHLEFVKRYFPDSEAGAYTLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137413_105575882	3300012924	Vadose Zone Soil	LLRTQKRWAEARQHLEFVRRYFPDSDVGTYTLLFEVDNALGDPRAAAEAVRFGLRMFPGNSDLQRLTLIH*
Ga0137419_111613431	3300012925	Vadose Zone Soil	RDPYNFQTQLNLGALLRQQKMWAEARQHLEFVRRYFPDSDAGTYTLLFEVDNALGDPRAASDAVRFGLRMFPDNSDLQRLTLIH*
Ga0137404_122096781	3300012929	Vadose Zone Soil	YRAMQDCLLRDPYNFQTHLNLGTLLHQQKKWAEARLHLEFVKRYFPDSEAGAYTLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLQRLNLIH*
Ga0181539_12905451	3300014151	Bog	QKKWAEARQHLEIVRRYSPDGDAETYALLYEVDKALGDPRAAAGAVRFGLRMFPDNPELQRLNPLL*
Ga0181530_100875051	3300014159	Bog	KLLARQKKWAEARKNIEFVKRYFPEADKTIYPLLFQIDNALGDSRAAAEAVRFGLRMFPENEDLKRLNSLL*
Ga0181538_102302451	3300014162	Bog	NLRAHVYLGELLARQKKWAEARKNIEFVKRYFPEADKTIYPLLYQIDNAVGDSRAAAEAVRFGLRMFPENEDLKRLNSLL*
Ga0182015_107976922	3300014495	Palsa	RKKWVEARKNIEFVKRYFPEADKTIYPLLFQIDNAMGDPRGAAEAVRFGLRMFPDNEDLKRLNLLL*
Ga0157379_112394302	3300014968	Switchgrass Rhizosphere	LGKMLTQQKKWPEARVHLEFVMRFFPDQDEKIYPLLFQVDRELGDPRAAARAVRLGLRMFPDSSELRRLNLM*
Ga0157376_107069511	3300014969	Miscanthus Rhizosphere	MLTQQKKWPEARVHLEFVMRFFPDQDEKIYPLLFQVDRELGDPRAAARAVRFGLRMFPDSSELRRLNLM*
Ga0137420_11954881	3300015054	Vadose Zone Soil	AMQDCDCLARDPYNFQTQLNLGALLHQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137418_101465623	3300015241	Vadose Zone Soil	QQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0137418_101593971	3300015241	Vadose Zone Soil	QQKKWAEARLHLEFVKRYFPDSDAGAYTLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH*
Ga0187856_10708921	3300017925	Peatland	QTRLNLGELLRQQKKWGEARQHLEFVRRYFPDGDAGTYSLLYEVDKALGDPRAAADAVRFGLRMFPDNPELQRLNLLP
Ga0187807_13080052	3300017926	Freshwater Sediment	YRAMLDCLAKDPYNYQTQLNLGEFFFKQKKWPEAREHLEFLMRFYPDEDSGIYPLLFQVDRALSDPVAAAKAVRFGLRLFPDNSELKRLNSLLGRTGFSLSAFGF
Ga0187824_100832662	3300017927	Freshwater Sediment	LREEKLDDARRAMLDCLAVDPYNYQTQRNLGELMAREKNWGEARRHLEFVMRYFPGEDSGVYSLLYQADEALGDPRAATRAVRFGLRLFPDNSELQRLNLLL
Ga0187821_101706241	3300017936	Freshwater Sediment	GMPTDTFYGLAVDPYNYQTQRNLGELMAREKNWGEARRHLEFVMRYFPDEDSGVYSLLYQADEALGDPRAATRAVRFGLRLFPDNSELQRLNLLL
Ga0187821_103753172	3300017936	Freshwater Sediment	LEFVMRFYPDEDSRIYPLLFQADRALGEMPAAAKAVRFGLRVFPDNSELQRLNLLLGKPGRLP
Ga0187847_106209841	3300017948	Peatland	WPEARQHLEFVMRYYPDEDSAIYPLLHQADIALRDPGSAAKAVRFGLRMFPDNSELQRLNLVK
Ga0187804_101074682	3300018006	Freshwater Sediment	FFKQKKWPEAREHLEFLMRFYPDEDSGIYPLLFQVDRALSDPVAAAKAVRFGLRLFPDNSELKRLNSLLGRTGFSLSAFGF
Ga0182025_10664252	3300019786	Permafrost	RLLNGQKKWEEARRNLEFVERYYPDDDAGIYTLLFQIDNALGDSRAAAQAVRFGLRMFPENSDLKRLNSLL
Ga0182025_11001401	3300019786	Permafrost	GRLLNGQKKWEEARRNLEFVERYYPDDDAGIYTLLFQIDNALGDSRAAAQAVRFGLRMFPENSDLKRLNSLL
Ga0210399_104296821	3300020581	Soil	NYQTQLNLGELLARQKKWQEARRHLEFVMRYYPDEDAGIYPLLFQADQALGDPSAARKAARFGLRMFPDNSELQRLNLLTGRTGFSLSIFGF
Ga0210399_110437892	3300020581	Soil	QHLEFVMRYFPDEYSGTYSLLFQADKALGDPSAAAKAVRFGLRMFPGDSELQRLNLLL
Ga0210399_110655191	3300020581	Soil	LATQEKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAGAKAVRFGLRMFPGNSELQRLNLLLGRTGFSLSLFGL
Ga0210395_107504141	3300020582	Soil	LGEMLANQKKWAEARQHLEFVMRFFPDEDSGIYPLLFQADKALGDASAAAKAVRFGMRMFPDNSELKRLNLIL
Ga0210401_107367702	3300020583	Soil	AEILLREEKLDEAYRAMLDCLAEDPYNYQTHVNLGKFLAKQKKWAEARPHLEFVARYFPDTDAEVYPLLIHADQALGDPSAAAKAARFGLRMFPDDLQLKQFTLPQRKSIFSVFGFWPLG
Ga0210401_115031311	3300020583	Soil	ARVHLEFVMQYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPDNSELRRLSLLL
Ga0210400_106119381	3300021170	Soil	VRQKKWAEARQHLEFVRRYFPDSDVGTYSLLFEADNALGDPRAAADAVRFGLRMFPGNSDLRRLTLIH
Ga0210408_111481382	3300021178	Soil	THLNLGALLHQQKKWAEARQHLEFVRRYFPDGDAATYTLLFDVDNALGDPRAAADAVRFGLRMFPDNSDLQRLNLIH
Ga0210396_101938032	3300021180	Soil	DPYNYQTQLNLSELLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLYQADKALGDPPAAAKAVRFGLRLFPENSELKRLNLLL
Ga0210397_110127062	3300021403	Soil	ARRHLEFVMRYFPDEDSGIYPLLNQADRALGDPSAANKAARFGLRMFPDNEELKRLNLRQ
Ga0210386_110782932	3300021406	Soil	HMSLGKLLAQQNKWAEARKHLEFVMRFFPDEDSEVYALLFKTDKNLGDSAAAGKAVKFGLRIFPDNSELQRLKPLL
Ga0210394_107918352	3300021420	Soil	LDEAYQAMLACLAQDPYNYQTQLNLGELLARQKKWAEARPHLEFVMRYFPDEDSGIYPLLYQAYQALGDPSSAAKAARFGLRLFPENSELRRLNLLL
Ga0210384_105825002	3300021432	Soil	KKWAEARQHLEFVMRYFPDEYSGTYSLLFQADKALGDPSAAAKAVRFGLRMFPGDSELQRLNLLL
Ga0210391_102818282	3300021433	Soil	LDCLAQDPYNYQTQLNLAELLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLYQADKALGDPPAAAKAVRFGLRLFPENSELKRLNLLL
Ga0210398_105980722	3300021477	Soil	LAEILWREDKEDEAYRAMQDCLEQDPYNYQTQRNLGELLARQKNWAEARRHLEFVMRYFPDENSGIYPLLNQADRALGDPSAANKAARFGLRMFPDNEELKRLNLRQ
Ga0210410_104019222	3300021479	Soil	AEYPYNYKTQLNLGELLANQTKWAEARVHLEFVMQYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRMFPDNSELRRLSLLL
Ga0210410_109886821	3300021479	Soil	ILFREGKLDEAYRAMLDCLAQDPYNFQTHRNLAELLAKKEKWGEARRHLEFVMRFFPDEHSGIYPLLYRADLALGDPSAAAKAARFGLRMFPGDSELQRLNLLLSRTGFSLSSFRW
Ga0210410_110470591	3300021479	Soil	AMLDCLAQDPYNFQTQLNLGELLARQKKWAEARPHLEFVMRYFPDEDSGIYPLLYQAYQALGDPSSAAKAARFGLRLFPDNSELRRLNLLL
Ga0210409_103932842	3300021559	Soil	LAALAEILLREEKLDEAYRAMLDCLAEDPYNYQTHVNLGKFLAKQKKWAEARPHLEFVARYFPDTDAEVYPLLIHADQALGDPSAAAKAARFGLRMFPDDLQLKQFTLPQRKSIFSVFGFWPLG
Ga0126371_133996461	3300021560	Tropical Forest Soil	KKWREARPHLEFVRRYFPDQDAEIYPLLVQAHRALGDGGAVTEAARFGLRMFPDNEELKALNLLEPKSNLLSWLK
Ga0137417_12865732	3300024330	Vadose Zone Soil	NLAELLHQQKKWNEARDLLELVRRYFPDGDAETYTLLYEVCHELGDTRAAADAVLFGLRMFPDNSDLQRLKLLL
Ga0207695_111923231	3300025913	Corn Rhizosphere	SEHAYRAMQDSISRDPYNFQSRMNLGELLSHQKKWAEARPHLEFVKRHYPDGDAETYTLLYEIDQALGDRRAAADAVRFGLRIFPDNSELLRLNLLP
Ga0207663_103190842	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NLGSLLARQKKWDEARKHLELVRRYFPDSDAGTYTLLFEIDNALGDPRGAADAVRFGLRMFPGNSELLRLTLIH
Ga0209131_10249925	3300026320	Grasslands Soil	YNFQTHLNLGSLLRTQKRWAEARLHLEFVRRYFPDSDVGTYTLLFEVDNALGDPRAAAEAVRFGLRMFPGNSDLQRLTLIH
Ga0257149_10645891	3300026355	Soil	AETLLRAGDLGRAYRAMQDCLARDPYNFQTQLNLGALLRQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAAGAVRFGLRMFPDNSDLKRLNLIH
Ga0257167_10671522	3300026376	Soil	ARDPYNFQTHLNLGALLRQQEKWAEARVHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH
Ga0257165_10063381	3300026507	Soil	LNLGALLHQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLKRLNLIH
Ga0179587_105425553	3300026557	Vadose Zone Soil	WAESREHLEFVMRYFPDQDAEIYRLLFQADNAMGDSSAAARAVRFGLRVFPDNSELKRLNLLL
Ga0209332_10762601	3300027439	Forest Soil	AENPYNYQTQLNLGELLARQEKWAEARRHLEFVMRYFPDENEKIYPLLFQGDKALGDPAAAAKAVRFGLRMFPDNSELQRLNLLL
Ga0208827_10925621	3300027641	Peatlands Soil	LGELLARQEKWAEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRLFPDNSELKRLNLML
Ga0209588_10201491	3300027671	Vadose Zone Soil	TQLNLGALLHQQKKWAEARLHLEFVKRYFPDSDAGTYSLLFEVDNALGDPRAAADAVRFGLRMFPDNSDLQRLNLIH
Ga0209701_100757224	3300027862	Vadose Zone Soil	YSAMQECLARDPYNFQTRLNLGELLRQQKKWAESRHQLEFVRRYFPDGDAGTYTLLFEVDNALGDPRAAADAVRFGLRMFPDNPDLKRLNLIH
Ga0209167_101885622	3300027867	Surface Soil	ARPHLEFVVQYFPDQDSGIYPLLYQADRALRDPSAAAKAVRFGLRMFPDNLELRRLNLLLGRTGFSLSLFGL
Ga0209167_105919692	3300027867	Surface Soil	PHLEFVMRYFPDQDSGIYPLLYQTDQALGDPSSAAKAVRFGLRTFPDNLELQRLNLLLGRTGFSLSLFGF
Ga0209579_105427941	3300027869	Surface Soil	LEFVMRYFPDEDSGIYPLLYQADEALGDPRAATRAVRFGLRLFPDNSELQRLNLLL
Ga0209579_106027432	3300027869	Surface Soil	NFQTQINLGELLYRQKKWAEARQHLEFVRRFFPDGDAATYSFLYEVDNALGDSRAAADAVHFGLRIFPDNPDLQRLKLLL
Ga0209275_101032581	3300027884	Soil	REDKEDEAYRAMQDCLEQDPYNYQTQRNLGELLARQKNWVETRRHLEFVMRYFPDEDSGIYPLLNQADRALGDPSAANKAARFGLRMFPDNEELKRLNLRQ
Ga0209067_103800171	3300027898	Watersheds	VQDPYNFQAHLDLGKLLAKQSKWTEARKHLEFVMRFFPDEDSGIYPLLFQADMALGDRSAAAQAVRFGLRVFPDNSELQRLNLLR
Ga0209006_108827681	3300027908	Forest Soil	LAQQGKWREARQHLEFVMRYYPDEDSGIYPLLFQVDKALGDPASAAKAVRFGLRLFPDNSELKRLNLLL
Ga0209698_106666361	3300027911	Watersheds	DPYSYQAHLDLGKLLARQNNWAEARKHLDFVVRFFPDENSEVYPLLFKVDKALGDSTAAAKAVKFGLRVFPDNSELQQLKPLL
Ga0310686_1170108301	3300031708	Soil	RAMLDCLAQDPYNYQTQRNLGELLAKQQKWAQAREHLEFVMRYFPDEDEKIYPLLFQADKALGDPSAAAKAVRFGLRVFPDSSELRGLNLLLGRTGFSLSLFGF
Ga0310686_1180115601	3300031708	Soil	CLALDPYNYQTQLNLGEMLAKQGKWTEARQHLEFVMRYFPDENSEIYPLLFQADKALGDPSGAAKAVRFGLRLFPDNSELQRLNLLL
Ga0310686_1188652951	3300031708	Soil	TQLNLGELLVRQKKWQEARQHLEFVMRFYPDEDSGIYPFLFEADQALGDKSAARKAVRFGLRMFPTDSELLRLNLLLGRTGFSLSIFTF
Ga0307476_108517792	3300031715	Hardwood Forest Soil	HVNLGVLLSNQKKWAEARSHLEFVMRYFPDENEGIYPLLFQADNELGDSRAAAEVLRFGLRMFPGNSDLQRLRFQH
Ga0311301_116581881	3300032160	Peatlands Soil	ELAEILLREDQLDEAYRAMLDCLAVDPYNYQTQLNLGELLATQEKWPEARRHLEFVMRYFPDEDEKIYPLLFQADKALGDPAAAAKAVRFGLRLFPDNSELKRLNLLLGRTGFSLSGLGL
Ga0307470_111275471	3300032174	Hardwood Forest Soil	FNFQTQINLGELLHNQKKWAEARQHLEFVKRHFPDGDAATYTLLYEVDNALGDPHAAAEAVRFGLRIFPDNSNLQRLNLLL
Ga0348332_128827062	3300032515	Plant Litter	HLNLGKLLAQQKKWIQAQEHLEFVMRYYPDEDSGIYPLLFQADRALGDPSAATQAARFGLRLFPDNSELQRLNSLLGRTGFHMPGIGFKFWR
Ga0335081_106087761	3300032892	Soil	LEDAYAAMQDCLQRDPYNYQTHVNLAEYFRRQNKWAEERKNLEFVMRYFPDEYAAIYPLLYQVDHELGDSRAAAEAVRFGLRMFPDTSDLQRLRLLL
Ga0335081_110568682	3300032892	Soil	RQKKWAEARKNLEFVMRYFPDDYAAIYPLLYQVDHELGDSRAAAEAVRFGLRRFPDNSDLQRLHLLL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.86
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.86
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077740

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign