NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F077904

Metagenome Family F077904

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077904
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 53 residues
Representative Sequence MSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV
Number of Associated Samples 38
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 78.95 %
% of genes near scaffold ends (potentially truncated) 26.50 %
% of genes from short scaffolds (< 2000 bps) 85.47 %
Associated GOLD sequencing projects 29
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (35.043 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(88.034 % of family members)
Environment Ontology (ENVO) Unclassified
(82.906 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(99.145 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.22%    β-sheet: 0.00%    Coil/Unstructured: 45.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF07508Recombinase 19.83
PF00239Resolvase 13.79
PF00589Phage_integrase 5.17
PF14311DUF4379 4.31
PF01435Peptidase_M48 4.31
PF03703bPH_2 3.45
PF07661MORN_2 1.72
PF01380SIS 1.72
PF10544T5orf172 0.86
PF02493MORN 0.86
PF01757Acyl_transf_3 0.86
PF02796HTH_7 0.86
PF02086MethyltransfD12 0.86
PF10754DUF2569 0.86
PF01396zf-C4_Topoisom 0.86
PF08378NERD 0.86
PF13156Mrr_cat_2 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 33.62
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 13.79
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 3.45
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 3.45
COG2849Antitoxin component YwqK of the YwqJK toxin-antitoxin moduleDefense mechanisms [V] 2.59
COG3392Adenine-specific DNA methylaseReplication, recombination and repair [L] 0.86
COG4642Uncharacterized conserved proteinFunction unknown [S] 0.86
COG0338DNA-adenine methylaseReplication, recombination and repair [L] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.96 %
UnclassifiedrootN/A35.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001589|JGI24005J15628_10015669All Organisms → Viruses → Predicted Viral3374Open in IMG/M
3300001589|JGI24005J15628_10017413All Organisms → Viruses → Predicted Viral3171Open in IMG/M
3300001938|GOS2221_1019320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium SCGC AAA160-J141691Open in IMG/M
3300005239|Ga0073579_1015115All Organisms → Viruses → Predicted Viral1406Open in IMG/M
3300008964|Ga0102889_1138661Not Available714Open in IMG/M
3300009172|Ga0114995_10074614All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1913Open in IMG/M
3300009172|Ga0114995_10080398All Organisms → Viruses → Predicted Viral1835Open in IMG/M
3300009172|Ga0114995_10119730Not Available1475Open in IMG/M
3300009172|Ga0114995_10130066All Organisms → Viruses → Predicted Viral1408Open in IMG/M
3300009172|Ga0114995_10137187All Organisms → Viruses → Predicted Viral1367Open in IMG/M
3300009172|Ga0114995_10160777All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1253Open in IMG/M
3300009172|Ga0114995_10268897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium940Open in IMG/M
3300009172|Ga0114995_10319763Not Available853Open in IMG/M
3300009172|Ga0114995_10355954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria804Open in IMG/M
3300009172|Ga0114995_10357625Not Available802Open in IMG/M
3300009172|Ga0114995_10357625Not Available802Open in IMG/M
3300009172|Ga0114995_10548242All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300009173|Ga0114996_10590366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria826Open in IMG/M
3300009173|Ga0114996_11086466Not Available564Open in IMG/M
3300009193|Ga0115551_1322300Not Available672Open in IMG/M
3300009409|Ga0114993_10396061All Organisms → cellular organisms → Bacteria → Proteobacteria1038Open in IMG/M
3300009409|Ga0114993_10599287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria810Open in IMG/M
3300009409|Ga0114993_10643116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium776Open in IMG/M
3300009420|Ga0114994_10141660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1630Open in IMG/M
3300009420|Ga0114994_10164065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1503Open in IMG/M
3300009420|Ga0114994_10399423All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon910Open in IMG/M
3300009420|Ga0114994_10629523Not Available702Open in IMG/M
3300009422|Ga0114998_10066459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1840Open in IMG/M
3300009422|Ga0114998_10250998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED199834Open in IMG/M
3300009422|Ga0114998_10260399Not Available816Open in IMG/M
3300009422|Ga0114998_10321780Not Available724Open in IMG/M
3300009422|Ga0114998_10494771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria573Open in IMG/M
3300009422|Ga0114998_10563333Not Available536Open in IMG/M
3300009422|Ga0114998_10593107Not Available522Open in IMG/M
3300009425|Ga0114997_10115529All Organisms → Viruses → Predicted Viral1622Open in IMG/M
3300009425|Ga0114997_10546463Not Available614Open in IMG/M
3300009425|Ga0114997_10607281Not Available576Open in IMG/M
3300009432|Ga0115005_10717314Not Available803Open in IMG/M
3300009432|Ga0115005_11107285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria643Open in IMG/M
3300009495|Ga0115571_1042220All Organisms → Viruses → Predicted Viral2155Open in IMG/M
3300009497|Ga0115569_10156974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1084Open in IMG/M
3300009498|Ga0115568_10445381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300009507|Ga0115572_10691707Not Available556Open in IMG/M
3300009512|Ga0115003_10025547All Organisms → Viruses → Predicted Viral3888Open in IMG/M
3300009512|Ga0115003_10527120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria691Open in IMG/M
3300009526|Ga0115004_10114682All Organisms → Viruses → Predicted Viral1646Open in IMG/M
3300009526|Ga0115004_10273099Not Available1004Open in IMG/M
3300009526|Ga0115004_10304397Not Available945Open in IMG/M
3300009526|Ga0115004_10359856All Organisms → cellular organisms → Bacteria → Proteobacteria862Open in IMG/M
3300009526|Ga0115004_10497021Not Available722Open in IMG/M
3300009526|Ga0115004_10587479Not Available660Open in IMG/M
3300009526|Ga0115004_10670119Not Available615Open in IMG/M
3300009526|Ga0115004_10753859Not Available579Open in IMG/M
3300009526|Ga0115004_10906688All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria526Open in IMG/M
3300009705|Ga0115000_10357055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria937Open in IMG/M
3300009705|Ga0115000_10701671Not Available625Open in IMG/M
3300009705|Ga0115000_10729447Not Available611Open in IMG/M
3300009705|Ga0115000_10971775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium518Open in IMG/M
3300009785|Ga0115001_10029239All Organisms → Viruses → Predicted Viral3643Open in IMG/M
3300009785|Ga0115001_10091685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1991Open in IMG/M
3300009785|Ga0115001_10140181All Organisms → Viruses → Predicted Viral1578Open in IMG/M
3300009785|Ga0115001_10320453All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon980Open in IMG/M
3300009785|Ga0115001_10335303All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon954Open in IMG/M
3300009785|Ga0115001_10365208Not Available907Open in IMG/M
3300009785|Ga0115001_10497924Not Available752Open in IMG/M
3300009785|Ga0115001_10644240Not Available645Open in IMG/M
3300009785|Ga0115001_10869310Not Available542Open in IMG/M
3300009786|Ga0114999_10630809Not Available810Open in IMG/M
3300010883|Ga0133547_10455140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae2599Open in IMG/M
3300010883|Ga0133547_10679725All Organisms → Viruses → Predicted Viral2043Open in IMG/M
3300010883|Ga0133547_10682761All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon2037Open in IMG/M
3300010883|Ga0133547_10831290All Organisms → cellular organisms → Bacteria1809Open in IMG/M
3300010883|Ga0133547_10832139All Organisms → Viruses → Predicted Viral1808Open in IMG/M
3300010883|Ga0133547_11330339All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300010883|Ga0133547_11426574All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300010883|Ga0133547_11518441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1256Open in IMG/M
3300010883|Ga0133547_11549916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1241Open in IMG/M
3300010883|Ga0133547_11628135All Organisms → Viruses → Predicted Viral1204Open in IMG/M
3300010883|Ga0133547_11656763All Organisms → Viruses → Predicted Viral1191Open in IMG/M
3300010883|Ga0133547_11924776Not Available1087Open in IMG/M
3300010883|Ga0133547_12069011All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300010883|Ga0133547_12192651Not Available1003Open in IMG/M
3300010883|Ga0133547_12196614All Organisms → Viruses → Predicted Viral1002Open in IMG/M
3300011253|Ga0151671_1167350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED199667Open in IMG/M
3300020396|Ga0211687_10313612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria616Open in IMG/M
(restricted) 3300022920|Ga0233426_10307887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria612Open in IMG/M
3300025137|Ga0209336_10131076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales679Open in IMG/M
3300025138|Ga0209634_1008774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6222Open in IMG/M
3300025138|Ga0209634_1015327All Organisms → Viruses → Predicted Viral4436Open in IMG/M
3300025138|Ga0209634_1148016Not Available962Open in IMG/M
3300025138|Ga0209634_1203651Not Available754Open in IMG/M
3300025168|Ga0209337_1070271All Organisms → Viruses → Predicted Viral1734Open in IMG/M
3300025849|Ga0209603_1102420All Organisms → Viruses → Predicted Viral1274Open in IMG/M
3300025890|Ga0209631_10059113All Organisms → cellular organisms → Bacteria2426Open in IMG/M
3300025892|Ga0209630_10167452All Organisms → Viruses → Predicted Viral1099Open in IMG/M
3300027687|Ga0209710_1032585All Organisms → Viruses → Predicted Viral2546Open in IMG/M
3300027687|Ga0209710_1109194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1075Open in IMG/M
3300027687|Ga0209710_1200133Not Available681Open in IMG/M
3300027752|Ga0209192_10126233All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300027752|Ga0209192_10332424Not Available539Open in IMG/M
3300027779|Ga0209709_10226777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium847Open in IMG/M
3300027779|Ga0209709_10235624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED199823Open in IMG/M
3300027779|Ga0209709_10236432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria821Open in IMG/M
3300027780|Ga0209502_10050238All Organisms → Viruses → Predicted Viral2298Open in IMG/M
3300027780|Ga0209502_10067399All Organisms → Viruses → Predicted Viral1906Open in IMG/M
3300027780|Ga0209502_10104423All Organisms → Viruses → Predicted Viral1432Open in IMG/M
3300027780|Ga0209502_10178984Not Available994Open in IMG/M
3300027788|Ga0209711_10086633All Organisms → Viruses → Predicted Viral1615Open in IMG/M
3300027791|Ga0209830_10054132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2116Open in IMG/M
3300027791|Ga0209830_10174294All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300027791|Ga0209830_10217550Not Available882Open in IMG/M
3300027791|Ga0209830_10292635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED199725Open in IMG/M
3300027801|Ga0209091_10389584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria634Open in IMG/M
3300027801|Ga0209091_10444950Not Available576Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine88.03%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.13%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.71%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.85%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.85%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.85%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.85%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.85%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.85%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001938Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300008964Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24005J15628_1001566923300001589MarineMSGRVRMVKWTREIMKNHKPRTPKQILKEKIRIDKIKKELYESDFHEITWDKKCV*
JGI24005J15628_1001741313300001589MarineVSGRIRMVKWTRELMKYYKPPTPKQLXRIKIREQKIKKEIMEDDFHEITWDKKCV*
GOS2221_101932063300001938MarineMRMVKWVKLYQNPNYKTPTPKQLERLNIREQKIMKELYESDS
Ga0073579_101511523300005239MarineMRLVKWVKLYQNPNYKTPTPKQLERLKIRKQKLMKELYDSDFHKITWDKKCV*
Ga0102889_113866123300008964EstuarineLSGRMRLTKWDRLYQKTNYKITTPKQLERLKIREQKIMKELYESDFHEIIWDKKCV*
Ga0114995_1007461423300009172MarineMISGRMKLTKWVRLYQNRNYKPSTPKQLEKLKIREQKLMKELYESDFHEITWDKKCV*
Ga0114995_1008039813300009172MarineVSGRVRMVKWTRELLKNDKPPTPKQLEKLKIREQKIMKELYESDFHEITWHKKCV*
Ga0114995_1011973013300009172MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114995_1013006613300009172MarineMVKWVKLYQNPNYKTPTPKQLERLNIREQKIMKELYESDFHEITWDKKCV*
Ga0114995_1013718733300009172MarineMSGRVRMVKWTKELMKNYKPSTPKQLIRFKIREQRIMKEMMEDDFHEITWDKKCV*
Ga0114995_1016077723300009172MarineMSGRIRMVKWTREIMKNYKSRTTKQILKEKLRVQKIMKKIYESDFHEITWDRKYS*
Ga0114995_1026889713300009172MarineSGRIRMVKWTRELMKNYKPPTPKQLERLKTREQKIMKELYKSDFHEITWDKKCV*
Ga0114995_1031976333300009172MarineMSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFYEITWDKKCV*
Ga0114995_1035595413300009172MarineVSGRLRMVKWTRELMKNYKPLTAKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114995_1035762523300009172MarineMSGKIRMVKWTRELMKNYKPPTPKKLERLKIREQKLMKELYDSDFHEITWDKKCV*
Ga0114995_1035762533300009172MarineMVKWTRELMKNYKPPTPKQLKRIKIREQKIKKEIMEDDFHEITWDKKCV*
Ga0114995_1054824223300009172MarineMVKWVRLYQNLNYKPPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV*
Ga0114995_1067740113300009172MarineKEIMKNYKSRTPEQILKEKIRTDKIKKKIYESDFHEITWDKKYI*
Ga0114996_1059036613300009173MarineVSGRIRMVKWTRELMKNYNPPTPKQLERLKIRDQKIMKEIYESDFHEITWDKKCV*
Ga0114996_1108646633300009173MarineSGRIRMVKWTRELMKNYNPPTPKQLEKHKIREQKIMKELYESDFHEITWDS*
Ga0115551_132230013300009193Pelagic MarineSRYSKNCIKRGCIVSGRVRMVKWTRELMKNYKPPTPKQLKRIKIREQKIMKELYESDFHEITWDKKCV*
Ga0114993_1039606123300009409MarineMSGRIRMVKWTRELMKNYKPTTPKQLERLKIREQKLMKELYQSDFHEITWDKKCV*
Ga0114993_1059928733300009409MarineMSGRMRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114993_1064311613300009409MarineMSGRIRMVKWTRELMKNYKPPTPKQLKRIKIREQKIIKELYESDFH
Ga0114994_1014166033300009420MarineMVKWTRELMKNYKPPTPKQLEKLKIREQKLMKELYESDFHEIIWDNKCV*
Ga0114994_1016406523300009420MarineLSGRMRMVKWVKLYQNPNYKTPTPKQLERLNIREQKIMKELYESDFHEITWDKKCV*
Ga0114994_1039942323300009420MarineMSGRIRMVKWTRELMKNYNPPTPKQLEKHKIREQKIMKELYESDFHEITWDS*
Ga0114994_1062952313300009420MarineMVKWTREIMKNHKPRTLKKILKEKIRKDKIKKEIMELDFHEITWDKIY*
Ga0114998_1006645933300009422MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFHKITWDKKYV*
Ga0114998_1025099833300009422MarineMSGRVRMVKWTRKLMKNYKPPNPKQLERLKIREQKLMKQLYKSDFHEITWDKKCV*
Ga0114998_1026039923300009422MarineVSGRIRIVKWTRELLKNYKPLTPKQLERLKIREQKIMKELYETYFHEITWDKKCV*
Ga0114998_1032178013300009422MarineMVKWTGELMKNYKPSTPKQLDRLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114998_1049477133300009422MarineMSGRVRMVKWTKELMKNYKPSTPKQLIRLKIREQRIMKEMMEYDFHEITWDKKCV*
Ga0114998_1056333323300009422MarineMSGRIRMVKWTRELLKNFKPPTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114998_1059310713300009422MarineLSGRMRMVKWVKLYQNPNYKTPTPKQLERLKIRKKKLMKELYQSDFHEITWDKKCV*
Ga0114997_1011552923300009425MarineMSGRIRMVKWSRELMKNHKSRTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV*
Ga0114997_1043040033300009425MarineMRMVKWTREIMKNHKPRTSKQILKEKIRTDKIKKEIMESDFHEITWDKIY*
Ga0114997_1054646323300009425MarineMSGRIRMVKWTRELMKNYKPPTPKQLEKLMIREQKLMKELYESDFHEITWDKKCV*
Ga0114997_1060728123300009425MarineLVSGRIRMVKWTRELMKNYKPTTPKQLERLKIREQKIMKELYDSDFHEITWDKKCV*
Ga0115005_1071731423300009432MarineMSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115005_1110728513300009432MarineMRMVKWVKLYQNPNYKTPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115571_104222033300009495Pelagic MarineMSGRVRMVKWTRELMKNYNPPTPKQLEKHKIRELKLMKELYESDFHEITSDKKCV*
Ga0115569_1015697413300009497Pelagic MarineLSGRMRLTKLVRLYQNPNYNPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115568_1044538123300009498Pelagic MarineMSGRVRMVKWTRELMKNYKPPTPKKLKRLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115572_1069170713300009507Pelagic MarineVSGRVRMVKWTRELMKNYTPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115003_1002554743300009512MarineMVKWTRELMKNYKTPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV*
Ga0115003_1052712023300009512MarineVSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESNFHEITWDKKCV*
Ga0115003_1073740823300009512MarineMSGRVRMVKWTREIMKNHKPRTPKQILKEKIRMDKIKKEIIESDFHVIT*
Ga0115004_1011468213300009526MarineLSGRMRMVKWVKLYQNPNYNPPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV*
Ga0115004_1027309913300009526MarineRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFHKITWDKKYV*
Ga0115004_1030439733300009526MarineRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFHEITWDKKYV*
Ga0115004_1035985623300009526MarineVSGRIRMVKWTRELMKYYKPPTPKQLKRIKIREQKIKKEIMEDDFHEITWDKKCV*
Ga0115004_1049702123300009526MarineTKWVRLYQNPNYKTPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115004_1058747923300009526MarineMSGRVRMVKWTRELLKNYNSPTPKQLERLKIREQKLMKQLYKSDFHEITWDKKCV*
Ga0115004_1067011923300009526MarineMSGRMRLVKWIRLYQNPNHNPPTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115004_1075385913300009526MarineMVKWTRELMKNYKPPTPKQLESLKIIEQKIMKELYESDFHEITWD
Ga0115004_1090668823300009526MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFH
Ga0115000_1035705513300009705MarineVSGRIRMVKWTRELMKNYKPPTPKQLERLKIIEQKIKKELYESDFHEITWDKKCV*
Ga0115000_1070167113300009705MarineMSGRVRMVKWTRELMKNYKPPTPKQLERHKIREQKIMKEIYESDFHEITWDKKCV*
Ga0115000_1072944713300009705MarineMSGRVRMVKWTREIMKNHKPRTPKQILKEKIRKDKIKKEIMELDFHEITWDKIY*
Ga0115000_1097177523300009705MarineVSGRIRMVKWTRELMKNYKPPTPKQLEKLKIREQKLMKELYESDFHEIIWDNKCV*
Ga0115001_1002923953300009785MarineMRMVKWVRLYQNPNYKTPTPKQLERLKIREQKIMKELYELDFHEITWDKKCV*
Ga0115001_1009168533300009785MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFHEITWDKKYV*
Ga0115001_1014018113300009785MarineRMVKWTRELMKNYNPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115001_1032045323300009785MarineMVKWTRELIKNYKPPTPKQLERLKIREQKIMKELYGSDFHEINWDKICV*
Ga0115001_1033530323300009785MarineVSGRIRMVKWTRELMKYYKPPTPKQLKRIKIREQKIKKELMEDDFHEI
Ga0115001_1036520833300009785MarineCIMSGRIRMVKWTRELMKNYNPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0115001_1049792413300009785MarineMVKWVKLYQNPNYKTPTPKQLERLNIREQKIMKELYDSDFHEITWDKKCV*
Ga0115001_1064424023300009785MarineMVKWTRELMKNYKPPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV*
Ga0115001_1086931013300009785MarineMVKWVKLYQNPNYKTPTPKQLERLKIRKKKLMKELYQSDFHEITWDKKCV*
Ga0114999_1063080933300009786MarineMEKIISGRVRMVKWTRELMKNYKPPTPKQLERLKLREQKTMKELYESDFHEITWDKKCV*
Ga0133547_1045514023300010883MarineVSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYDSDFYEITWDKKCV*
Ga0133547_1067972523300010883MarineMSGRIRMVKWTRELMKNYKTPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0133547_1068276133300010883MarineMSGRVRMVKWTREIMKNYKSITPEQILKEKIRTDKIKKKIYESDFHEITWDKKYI*
Ga0133547_1083129033300010883MarineMSGRIRMVKWSRELMKNHKSRTPKQLERHKIREQKIMKELYESDFHEITWDKKCV*
Ga0133547_1083213923300010883MarineMSGRIRMVKWTRELLKNFKPPTPKQLEKLKIREQKIMKELYESDFYEITWDKKCV*
Ga0133547_1133033933300010883MarineMISGIMRMVKWTREIMKNYKPPTPKQLEKRKIREQKIIKELYVSDFHEITWDKKCV*
Ga0133547_1142657423300010883MarineMSGRIRMVKWTRELMKNYKPPTPKQLEKLKIREQKLMKELYESDFHEIIWDNKCV*
Ga0133547_1151844113300010883MarineMVKWIKLYQNPNYKTPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV*
Ga0133547_1154991623300010883MarineMSGRVRMVKWTRELMKNYNPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0133547_1162813513300010883MarineNSKDSIKRGCIVSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKLMKKLYESDFHEITWDKKCV*
Ga0133547_1165676323300010883MarineMRMVKWVRLYQNPNYKTPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV*
Ga0133547_1192477633300010883MarineWTRELIKNYKPPTPKQLERLKIREQKIMKELYGSDFHEINWDKICV*
Ga0133547_1206901113300010883MarineSGRMRMAKWVKLYQNPNYKTPTPKQLERLKIRKKKLMKELYESDFHEITWDKKCV*
Ga0133547_1219265133300010883MarineVSGRMRMVKWVRLYQNPNYKTPTPKQLEKLKIREQKIMKELYESDFHQITWDKKCV*
Ga0133547_1219661423300010883MarineMSGRIRMVKWTRELMKNYKPTTPKQLERLKIREQKIMKELYDSDFHEITWDKKCV*
Ga0151671_116735023300011253MarineMSGRIRMIKWTRELMKNYKLPTPKQLERLKIRKKKLMKELYDS
Ga0211687_1031361213300020396MarineMSGRIRMIKWTGELMKNYKPPTPKQLEKLKIREQKIMKEIYVSDFHEIT
(restricted) Ga0233426_1030788713300022920SeawaterMSGRVRMVKWTREIMKNHKPRTPKQILKEKIRIDKIKKELYESDFHEITWNKKCV
Ga0209336_1013107613300025137MarineMSGRMRMVKWIRLYQNPKYKPPTPKQLDRLKIREQKLMKELYESDFHEITWDKKCV
Ga0209634_1008774123300025138MarineVSGRIRMVKWTRELMKYYKPPTPKQLKRIKIREQKIKKEIMEDDFHEITWDKKCV
Ga0209634_101532743300025138MarineMSGRVRMVKWTREIMKNHKPRTPKQILKEKIRIDKIKKELYESDFHEITWDKKCV
Ga0209634_114801613300025138MarineGCIVSGRIRMVKWTRELMKYYKPPTPKQLERLKTREQKIMKELYESDFHEITWDKKCV
Ga0209634_120365123300025138MarineYNQESNGVCMSGRIRLAKWTREIMKNHQQRTPKQILKENIRTDKIKKELYESDFHEITWDKKCV
Ga0209337_107027123300025168MarineVSGRIRMVKWTRELMKYYKPPTPKQLERLKTREQKIMKELYESDFHEITWDKKCV
Ga0209603_110242023300025849Pelagic MarineMSGRVRMVKWTRELMKNYNPPTPKQLEKHKIRELKLMKELYESDFHEITWDKKCV
Ga0209631_1005911343300025890Pelagic MarineMSRRVRMIKWRRELMKNYKPPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV
Ga0209630_1016745233300025892Pelagic MarineGRVRMVKWTRELMKNYKPPTPKQLERLKIREQKLMKELYESDFHEITWDKKCV
Ga0209710_103258543300027687MarineMRMVKWVKLYQNPNYKTPTPKQLERLKIRKKKLMKELYQSDFHEITWDKKCV
Ga0209710_110919433300027687MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKLMKELYESDFHKITWDKKYV
Ga0209710_120013313300027687MarineMSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYGSDFHEINWDKICV
Ga0209192_1012623333300027752MarineVSGRLRMVKWTRELMKNYKPLTAKQLERLKIREQKIMKELYESDFHEITWDKKCV
Ga0209192_1033242413300027752MarineMSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFYEIT
Ga0209709_1022677723300027779MarineMSGRIRMVKWTRELMKNYNPPTPKQLEKHKIREQKIMKELYESDFHEITWDS
Ga0209709_1023562423300027779MarineMSGRIRMVKWSRELMKNHKSRTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV
Ga0209709_1023643233300027779MarineVSGRIRMVKWTRELMKNYNPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV
Ga0209502_1005023813300027780MarineLVSGRIRMVKWTRELMKNHKPPTPKQLERLKIREQKLMKELYESDFHEINWDKKCV
Ga0209502_1006739923300027780MarineMRMVKWVKLYQNPNYKTPTPKQLERLNIREQKIMKELYESDFHEITWDKKCV
Ga0209502_1010442323300027780MarineMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFHEITWDNKCV
Ga0209502_1017898433300027780MarineVSGRIRMVKWTRELMKNYKPQTPKQLERLKIREQKTMKELYESDFHEITWDKKCV
Ga0209711_1008663323300027788MarineVSGRIRMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESNFHEITWDKKCV
Ga0209830_1005413223300027791MarineVSGRIRMVKWTRELLKNYKPPTPKQLEKLKIREQKIMKELYESDFHEITWDKKCV
Ga0209830_1017429423300027791MarineVSGRIRMVKWTRELMKYYKPPTPKQLEKLKIREQKLMKKLY
Ga0209830_1021755023300027791MarineMISGRMKLTKWVRLYQNRNYKPSTPKQLEKLKIREQKLMKELYESDFHEITWDKKCV
Ga0209830_1029263533300027791MarineMSGRIRMVKWTRELMKNYKTPTPKQLERLKIREQKIMKELYE
Ga0209091_1038958423300027801MarineVSGRIRMVKWTRELMKNYKPPTPKQLEKLKIREQKLMKELYESDF
Ga0209091_1044495013300027801MarineMVKWTRELMKNYKPPTPKQLERLKIREQKIMKELYESDFHEITWDKKCV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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