Metagenome / Metatranscriptome Family F077917

Basic Information
Family ID	F077917
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	46 residues
Representative Sequence	PDADEELEVQWLPLEQAVKLVLRGEWNDGKTALALWRAQYHLQL
Number of Associated Samples	101
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Bacteria (97.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.821 % of family members)
Environment Ontology (ENVO)	Unclassified (27.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.94% β-sheet: 0.00% Coil/Unstructured: 68.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13419	HAD_2	7.69
PF00293	NUDIX	0.85
PF01171	ATP_bind_3	0.85
PF07676	PD40	0.85
PF13242	Hydrolase_like	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.85
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.85
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.85
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.85
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.85
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.44 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.02 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	90.60 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	87.18 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	87.18 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	83.76 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.42 %
Unclassified	root	N/A	2.56 %

Name	Rank	Taxonomy	Distribution
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	83.76 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.42 %
Unclassified	root	N/A	2.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10143086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	616	Open in IMG/M
3300001593\|JGI12635J15846_10679828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	594	Open in IMG/M
3300002245\|JGIcombinedJ26739_100117234	All Organisms → cellular organisms → Bacteria → Proteobacteria	2505	Open in IMG/M
3300002245\|JGIcombinedJ26739_100725894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	872	Open in IMG/M
3300002245\|JGIcombinedJ26739_100768528	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300004080\|Ga0062385_11024162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	555	Open in IMG/M
3300004082\|Ga0062384_101048040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	586	Open in IMG/M
3300004091\|Ga0062387_101489426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	542	Open in IMG/M
3300004635\|Ga0062388_100558562	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005610\|Ga0070763_10254818	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005712\|Ga0070764_10228216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1053	Open in IMG/M
3300005944\|Ga0066788_10061974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	892	Open in IMG/M
3300005994\|Ga0066789_10370532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	598	Open in IMG/M
3300005994\|Ga0066789_10444582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	541	Open in IMG/M
3300006059\|Ga0075017_100993988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	653	Open in IMG/M
3300009500\|Ga0116229_10013469	All Organisms → cellular organisms → Bacteria → Proteobacteria	11555	Open in IMG/M
3300009500\|Ga0116229_10173448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1872	Open in IMG/M
3300009522\|Ga0116218_1109875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1255	Open in IMG/M
3300009627\|Ga0116109_1180875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	503	Open in IMG/M
3300009633\|Ga0116129_1103425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	824	Open in IMG/M
3300009641\|Ga0116120_1251104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	555	Open in IMG/M
3300009646\|Ga0116132_1287900	Not Available	502	Open in IMG/M
3300009701\|Ga0116228_10790785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	637	Open in IMG/M
3300009701\|Ga0116228_10894421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	593	Open in IMG/M
3300009709\|Ga0116227_10658450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	792	Open in IMG/M
3300009824\|Ga0116219_10382349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	786	Open in IMG/M
3300010343\|Ga0074044_11085253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	524	Open in IMG/M
3300011120\|Ga0150983_15879054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	670	Open in IMG/M
3300011120\|Ga0150983_16107863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	603	Open in IMG/M
3300012924\|Ga0137413_10986955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	659	Open in IMG/M
3300012925\|Ga0137419_10319912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1192	Open in IMG/M
3300012925\|Ga0137419_10898500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	729	Open in IMG/M
3300012929\|Ga0137404_10276330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1450	Open in IMG/M
3300012944\|Ga0137410_11032414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	701	Open in IMG/M
3300014168\|Ga0181534_10349262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	808	Open in IMG/M
3300014169\|Ga0181531_10336212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	926	Open in IMG/M
3300014498\|Ga0182019_11492068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	503	Open in IMG/M
3300014638\|Ga0181536_10544769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	500	Open in IMG/M
3300014655\|Ga0181516_10045181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2232	Open in IMG/M
3300014658\|Ga0181519_11032398	Not Available	511	Open in IMG/M
3300015052\|Ga0137411_1146090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	810	Open in IMG/M
3300017948\|Ga0187847_10241980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	983	Open in IMG/M
3300018024\|Ga0187881_10357585	Not Available	601	Open in IMG/M
3300018038\|Ga0187855_10196088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1193	Open in IMG/M
3300018043\|Ga0187887_10354968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	865	Open in IMG/M
3300018044\|Ga0187890_10613945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	613	Open in IMG/M
3300018047\|Ga0187859_10024982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3264	Open in IMG/M
3300020021\|Ga0193726_1031193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2642	Open in IMG/M
3300020199\|Ga0179592_10188484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	937	Open in IMG/M
3300020580\|Ga0210403_10163400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1823	Open in IMG/M
3300020583\|Ga0210401_10087624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2928	Open in IMG/M
3300021086\|Ga0179596_10432374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	665	Open in IMG/M
3300021168\|Ga0210406_10013647	All Organisms → cellular organisms → Bacteria	7805	Open in IMG/M
3300021168\|Ga0210406_10057301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3389	Open in IMG/M
3300021178\|Ga0210408_10284643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1318	Open in IMG/M
3300021180\|Ga0210396_11188552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	639	Open in IMG/M
3300021181\|Ga0210388_11604634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	540	Open in IMG/M
3300021401\|Ga0210393_10078447	All Organisms → cellular organisms → Bacteria → Proteobacteria	2613	Open in IMG/M
3300021404\|Ga0210389_11307341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	555	Open in IMG/M
3300021405\|Ga0210387_10989145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	737	Open in IMG/M
3300021420\|Ga0210394_10652102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	924	Open in IMG/M
3300021477\|Ga0210398_10726857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	802	Open in IMG/M
3300021477\|Ga0210398_11335296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	562	Open in IMG/M
3300021478\|Ga0210402_11578082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	583	Open in IMG/M
3300023088\|Ga0224555_1041233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1799	Open in IMG/M
3300025619\|Ga0207926_1082259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	813	Open in IMG/M
3300025679\|Ga0207933_1206697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	541	Open in IMG/M
3300026285\|Ga0209438_1066153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1186	Open in IMG/M
3300026304\|Ga0209240_1207833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	592	Open in IMG/M
3300026551\|Ga0209648_10251559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1308	Open in IMG/M
3300026551\|Ga0209648_10488868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	725	Open in IMG/M
3300027037\|Ga0209005_1001896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2441	Open in IMG/M
3300027072\|Ga0208238_1021359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	565	Open in IMG/M
3300027559\|Ga0209222_1091645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	587	Open in IMG/M
3300027574\|Ga0208982_1039973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	927	Open in IMG/M
3300027674\|Ga0209118_1220356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	507	Open in IMG/M
3300027795\|Ga0209139_10189884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	727	Open in IMG/M
3300027855\|Ga0209693_10101047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1427	Open in IMG/M
3300027860\|Ga0209611_10138549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1561	Open in IMG/M
3300027860\|Ga0209611_10416849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	766	Open in IMG/M
3300027879\|Ga0209169_10207241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1025	Open in IMG/M
3300028762\|Ga0302202_10130754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1380	Open in IMG/M
3300028762\|Ga0302202_10469454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	573	Open in IMG/M
3300028765\|Ga0302198_10426678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	602	Open in IMG/M
3300028789\|Ga0302232_10456172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	628	Open in IMG/M
3300028813\|Ga0302157_10302864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	874	Open in IMG/M
3300028879\|Ga0302229_10330156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	683	Open in IMG/M
3300028882\|Ga0302154_10583261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	527	Open in IMG/M
3300029882\|Ga0311368_10066145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3217	Open in IMG/M
3300029910\|Ga0311369_10298434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1439	Open in IMG/M
3300029945\|Ga0311330_10280635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1450	Open in IMG/M
3300029945\|Ga0311330_10709914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	774	Open in IMG/M
3300029945\|Ga0311330_11351408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	510	Open in IMG/M
3300029953\|Ga0311343_10154902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2480	Open in IMG/M
3300030053\|Ga0302177_10405897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	713	Open in IMG/M
3300030503\|Ga0311370_12463218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	501	Open in IMG/M
3300030739\|Ga0302311_10781608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	622	Open in IMG/M
3300030743\|Ga0265461_12108580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	648	Open in IMG/M
3300030814\|Ga0265741_101724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1320	Open in IMG/M
3300031018\|Ga0265773_1046450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	510	Open in IMG/M
3300031027\|Ga0302308_10785673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	532	Open in IMG/M
3300031057\|Ga0170834_107272230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	770	Open in IMG/M
3300031057\|Ga0170834_114083081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1578	Open in IMG/M
3300031128\|Ga0170823_15194799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	966	Open in IMG/M
3300031231\|Ga0170824_117711855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	707	Open in IMG/M
3300031231\|Ga0170824_119121180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	663	Open in IMG/M
3300031446\|Ga0170820_10884267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	697	Open in IMG/M
3300031524\|Ga0302320_10199020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2876	Open in IMG/M
3300031525\|Ga0302326_13704177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	503	Open in IMG/M
3300031595\|Ga0265313_10420356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	522	Open in IMG/M
3300031708\|Ga0310686_115310338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	924	Open in IMG/M
3300031715\|Ga0307476_11395890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	510	Open in IMG/M
3300031754\|Ga0307475_11362218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	548	Open in IMG/M
3300032160\|Ga0311301_13028147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	504	Open in IMG/M
3300032174\|Ga0307470_11920018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	504	Open in IMG/M
3300033890\|Ga0334810_011225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2355	Open in IMG/M
3300034199\|Ga0370514_005326	All Organisms → cellular organisms → Bacteria → Proteobacteria	2882	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.16%
Host-Associated	Host-Associated	6.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.21%
Aquatic	Environmental → Aquatic	17.95%
Plants	Host-Associated → Plants	6.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Peat	Environmental → Terrestrial → Peat	17.95%
Freshwater	Environmental → Aquatic → Freshwater	17.09%
Peat Moss	Host-Associated → Plants → Peat Moss	5.98%
Sediment	Environmental → Aquatic → Sediment	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.09%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	5.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.26%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.84%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	5.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.13%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.56%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101430861	3300001471	Forest Soil	EELEIQWLPLAQAADKVLRGEWNDGKTALALWRAQYQLQL*
JGI12635J15846_106798281	3300001593	Forest Soil	EELELQWLPIEDAVGMLLRGEWNDGKTALALWRAQSQLQL*
JGIcombinedJ26739_1001172341	3300002245	Forest Soil	EELELQWLPIEEAVGMLLRGEWNDGKTALALWRAQSQLQL*
JGIcombinedJ26739_1007258943	3300002245	Forest Soil	DLELQWLPMTDAMAKVVSGEWNDGKTALALWRAQYHLHL*
JGIcombinedJ26739_1007685281	3300002245	Forest Soil	PDADEELEIEWLPMADAADKVLRGEWNDGKTALALWRAQYHLQL*
Ga0062385_110241621	3300004080	Bog Forest Soil	ADEELEMQWMPLEEAIRNILLGEWNDGKSAMALCRAQYRLQM*
Ga0062384_1010480402	3300004082	Bog Forest Soil	ADEELEMQWMPLEEAIGNILLGKWNDGKSAMALCRAQYRLQM*
Ga0062387_1014894262	3300004091	Bog Forest Soil	YLARDLEIGAPNPDVDEDLEHQWLPLQQAVDLVLRGDWNDGKTVVALLRARFELQL*
Ga0062388_1005585623	3300004635	Bog Forest Soil	LEVGAASPDADEELELEWLPLNQAIDHVLKGEWNDGKTAMALWRAQYQLQM*
Ga0070763_102548181	3300005610	Soil	ASPDADEELELQWLPLEQAIRHVLEGEWNDGKTAMALWRAQHQLQM*
Ga0070764_102282163	3300005712	Soil	LEIKWLPLEDAMGHILRGEWNDGKTAMALWRAQYRLQM*
Ga0066788_100619741	3300005944	Soil	YLARDLKVGAASPDADEELELKWLPLDEAIGHVLRGEWSDGKTAMALWRAQYQLQMDRPIG*
Ga0066789_103705321	3300005994	Soil	APDADEELELQWLPMADAMAKVVSGEWNDGKTALALWRAQYHLQL*
Ga0066789_104445822	3300005994	Soil	PDADEDLELQWLPLEAALHKVLSGEWNDGKTAVALLRAEYQLKL*
Ga0075017_1009939882	3300006059	Watersheds	ELEVEWVALDEAIGRVQRGDWNDGKTAMALMRAQYQLQL*
Ga0116229_100134691	3300009500	Host-Associated	DVGEPQPDADEELEHRWMPLGDAVGHALRAEWNDGKSVVALLRAQYQLRL*
Ga0116229_101734481	3300009500	Host-Associated	TLGESAPDADEELELAWLPFARAAELVLCGDWNDGKTALALWRAQKHLQL*
Ga0116218_11098751	3300009522	Peatlands Soil	ELEITWMPLGDAIERVLRGEWNDGKTALALVRAQYRLQL*
Ga0116109_11808752	3300009627	Peatland	EELEMQWMPLNDAIGRVLRGEWNDGKTAMALCRAQYQLQM*
Ga0116129_11034251	3300009633	Peatland	RDLEVGKSSPDADEELEIRWLPLEQAIGHVLEGAWNDGKTAMALQRAAHHMQL*
Ga0116120_12511042	3300009641	Peatland	DEELEHQWMPLQQAVELVLRGDWNDGKTVVALLRAQYELQL*
Ga0116132_12879001	3300009646	Peatland	ELEIGTPAPDADEELEHQWMPLQHAVEHVLRGDWNDGKTVVALLRAQYELQL*
Ga0116228_107907851	3300009701	Host-Associated	DLEVGNATPDADEDLELQWIPFAEALELALRGDWNDGKTVVALLRAQYQLQL*
Ga0116228_108944211	3300009701	Host-Associated	VGASSPDADEELELQWLPLKDALQKLLSGEWNDGKTALALWRAQYHLQL*
Ga0116227_106584501	3300009709	Host-Associated	EELELQWLPLRTAIDKVRRGEWDDGKTALALMRAQYHLQL*
Ga0116219_103823493	3300009824	Peatlands Soil	LDVGVAAPDVDEELELKWLPLDEAIGRVQRGEWNDGKTAMALMRAQYHLQL*
Ga0074044_110852531	3300010343	Bog Forest Soil	NPDVDEELEIQWMPLRQAVDLVLRGDWNDGKTVVALLRAQFELQL*
Ga0150983_158790542	3300011120	Forest Soil	GASAPDADEELELQWLPMTDAVAKVLNGEWNDGKTALGLWRAQYHLQL*
Ga0150983_161078631	3300011120	Forest Soil	IQWLPLQDAAGKVLRGEWNDGKTALGLWRAQYHLQL*
Ga0137413_109869551	3300012924	Vadose Zone Soil	ELEVGVATPDVDEELGLEWLPLGEALGRVLRGEWNDGKTAMALVRAQYHLQL*
Ga0137419_103199123	3300012925	Vadose Zone Soil	ELELEWVPLGEALGRVLRGDWNDGKTAMALMRAQYHLQL*
Ga0137419_108985001	3300012925	Vadose Zone Soil	VGPPAPDADEELELQWLPLPDAVDRVLRGEWNDGKTALALWRAQYHLQL*
Ga0137404_102763301	3300012929	Vadose Zone Soil	RELTVGAATPDVDEELQLEWVPLSEALGRVLRGEWNDGKTAMALVRAQYHLQL*
Ga0137410_110324141	3300012944	Vadose Zone Soil	ADEELQIQWLPLGEAVEQVLRGEWNDGKTALGLWRAQYHLQL*
Ga0181534_103492623	3300014168	Bog	VGAPAPDPDEELEVQWMPFGQAMGHIQQGEWNDGKTAMALLRAQYQLQL*
Ga0181531_103362121	3300014169	Bog	IVGRPAPDADEELELQWLPLEEAVERVLHCEWNDGKTALALWRAQNRLK*
Ga0182019_114920681	3300014498	Fen	PDADEELEVQWLPLEQAVKLVLRGEWNDGKTALALWRAQYHLQL*
Ga0181536_105447691	3300014638	Bog	ARPDADEELEIDWLPFAEALERVARGDWNDGKTAMALLRARHRLHSVKLR*
Ga0181516_100451815	3300014655	Bog	DVGAPTPDPDEELEVQWVSFGEAMCHIQRGDWNDGKTAMALLRAQYQLQL*
Ga0181519_110323981	3300014658	Bog	VPDADEELEHQWMPLQQAVELVLRGDWNDGKTVVAILRAQYELQL*
Ga0137411_11460902	3300015052	Vadose Zone Soil	LEVGAASPDVDEELELEWVPLGEALGRVLRGEWNDGKTAMALARAQYHLQL*
Ga0187847_102419801	3300017948	Peatland	RDLDVGVAAPDVDEELELKWLPLDEAIGRVQRGEWNDGKTAMALMRAAYQLRL
Ga0187881_103575851	3300018024	Peatland	ELEIGTPAPDADEELEHQWMPLQHAVEHVLRGDWNDGKTVVALLRAQYELQL
Ga0187855_101960883	3300018038	Peatland	ELELMWIPLGEAIERVLRGDWNDGKTALALVRAQYRLQL
Ga0187887_103549681	3300018043	Peatland	DLKIGPPSPDADEELELQWLPLARALEFVQQGEWNDGKTAVALMRAQYHMQL
Ga0187890_106139451	3300018044	Peatland	PDADEELEIEWLPFGEALERVARGDWNDGKTAMALLRAQYRLHSVKLR
Ga0187859_100249821	3300018047	Peatland	ELEIEWLPFREAFERVARGDWNDGKTAMALLRAQYRLHSVKLR
Ga0193726_10311931	3300020021	Soil	YLARELEIGVAAPDADEELELAWVPLGEALGRVLRGDWNDGKTAMALVRAQYHLQL
Ga0179592_101884843	3300020199	Vadose Zone Soil	LEIQWLPLRDAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0210403_101634001	3300020580	Soil	EELELKWLPLDEAIGHVLEGDWNDGKTAMALWRAQYQLQM
Ga0210401_100876241	3300020583	Soil	EIGPPKPDADEDLELRWLPLEEAINLTLSGAWNDGKTALGLCRARYQLQM
Ga0179596_104323742	3300021086	Vadose Zone Soil	RELKVGAASPDVDEELELAWVPLGEAVERVLRGDWNDGKTAMALLRARHHLRG
Ga0210406_100136479	3300021168	Soil	VGAASPDADEELELKWLPLDEAIGHVLEGDWNDGKTAMALWRAQYQLQM
Ga0210406_100573016	3300021168	Soil	DEELELKWLPLDQAVGHVLKGDWNDGKTAMALWRAQYQLQM
Ga0210408_102846431	3300021178	Soil	DVGAASPDADEELELKWLPLDEAISHVLKGDWNDGKTAMALWRAQYQLQM
Ga0210396_111885522	3300021180	Soil	LGAAAPDPDEELEVQWVPFGQVMGHIQQGEWNDGKTAMALLRAQYQLQL
Ga0210388_116046342	3300021181	Soil	LARELDLGAAAPDPDEELEVQWVPFGQVMGRIQQGEWNDGKTAMALLRAQYQLQL
Ga0210393_100784471	3300021401	Soil	ADEELELQWLPMTDAVAKVLTGEWNDGKTALGLWRAQYHVQL
Ga0210389_113073411	3300021404	Soil	AAPDADEELEIQWLPIADAAAKVLRGEWNDGKTAIALWRAQYHLQL
Ga0210387_109891453	3300021405	Soil	DEELEIQWLPLDEALNLVLRGVWNDGKTAMALWRAQYQLQL
Ga0210394_106521023	3300021420	Soil	LCAPAPDADEELEIEWLPMADAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0210398_107268571	3300021477	Soil	LELQWLPLEQAIRHVLEGEWNDGKTAMALWRAQYQLQM
Ga0210398_113352961	3300021477	Soil	ELKWFPRDEAIGHVLKGDWNDGKTAMALWRAQYQLRM
Ga0210402_115780822	3300021478	Soil	LARELEVGAASPDVDEELELEWVPLGEALGRVLRGEWNDGKTAMALARAQCHLQL
Ga0224555_10412331	3300023088	Soil	YLARDLDVGPAAPDVDEELELDWVPLGEAIGRVQRGEWNDGKTAMALMRAQYHLQL
Ga0207926_10822593	3300025619	Arctic Peat Soil	APTPDADEELELAWMPIGEAIDRVLRGEWDDGKTALGLVRAQYQLQL
Ga0207933_12066971	3300025679	Arctic Peat Soil	ELQWLPLQEAIGLVLRGEWSDGKTALGLLRAQYQLQL
Ga0209438_10661533	3300026285	Grasslands Soil	LEVGPPAPDADEELEIQWLPLRDAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0209240_12078331	3300026304	Grasslands Soil	QWLPLRDAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0209648_102515593	3300026551	Grasslands Soil	EELEIQWLPLRDAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0209648_104888682	3300026551	Grasslands Soil	LKVGAASPDVDEELELAWVPLGEAVERVLRGDWNDGKTAMALLRARHHLRS
Ga0209005_10018965	3300027037	Forest Soil	DADEELEMQWMPLEEAIGKVLRGEWNDGKTAMALCRAKYHLQL
Ga0208238_10213591	3300027072	Forest Soil	DLGAAAPDPDEELEVQWLPFGQVMGRIQQGEWNDGKTAMALLRAQYQLQL
Ga0209222_10916451	3300027559	Forest Soil	DEELELQWLPIEDAVGMLLRGEWNDGKTALALWRAQYQLQL
Ga0208982_10399731	3300027574	Forest Soil	VGAASPDADEELEIKWLPLQEAVGHVLRGEWNDGKTAMALWRAQYRLQL
Ga0209118_12203562	3300027674	Forest Soil	APDADEELEIQWLPMADAADKVLRGEWNDGKTALALWRAQYHLQL
Ga0209139_101898841	3300027795	Bog Forest Soil	ELKWLPLDEAIALILEGEWNDGKTALGLWRAQHQLQM
Ga0209693_101010471	3300027855	Soil	PASPDADEELELQWLPLEQAIRHVLEGEWNDGKTAMALWRAQHQLQM
Ga0209611_101385491	3300027860	Host-Associated	QWIPFSQAVELALRGDWNDGKTVVALLRAQYELQL
Ga0209611_104168493	3300027860	Host-Associated	ELELQWMPLSQAADLVLRGDWNDGKTVVALLRARYQLQL
Ga0209169_102072413	3300027879	Soil	SPDADEELEIKWLPLEDAMGHILRGEWNDGKTAMALWRAQYRLQM
Ga0302202_101307543	3300028762	Bog	DLEIQWMPLAEAVDLSLRGEWNDGKTVVALLRAQYQLQTVTRS
Ga0302202_104694541	3300028762	Bog	DSDEELQLQWMPLSDAVDRVLTAKWNDGKTALGLLRAQHQLQL
Ga0302198_104266782	3300028765	Bog	GPPAPDADEELELQWMPLQDAIAKVLSGEWNDGKTALALWRAQYQLQL
Ga0302232_104561721	3300028789	Palsa	PAPDSDEELQLQWMPLSEAVSLVLTGKWNDGKTALGLLRAQHQLQV
Ga0302157_103028642	3300028813	Bog	MYLARDLEIGSSAPDADEELELQWLSLKEALQKLLTGEWNDGKTALALWRAQYHLQL
Ga0302229_103301562	3300028879	Palsa	ELELDWLPLGEAIERVLKGEWNDGKTAMALLRAQFQLQL
Ga0302154_105832612	3300028882	Bog	ATPDADEDLELQWLPLAVALERVLCGEWNDGKTIAALVRANHALQV
Ga0311368_100661457	3300029882	Palsa	DADEELDLKWLPLDQAVNHVLTGEWNDGKTAMALWRAQYQLQM
Ga0311369_102984344	3300029910	Palsa	APDSDEELQLQWMPLSEAVSLVLTGKWNDGKTALGLLRAQHQLQV
Ga0311330_102806354	3300029945	Bog	PDVDEELELQWMPLSRAADLALQGDFNDGKTVVALLRAKYQLQL
Ga0311330_107099143	3300029945	Bog	QWLPFDEAIDKVRRGEWDDGKTAMALMRAQYHLEA
Ga0311330_113514082	3300029945	Bog	PDADEELEIEWLPFGEALERVARGDWNDGKTALALLRAQYRLHSVKLR
Ga0311343_101549025	3300029953	Bog	EDLEIQWMPLAEAVDLSLRGEWNDGKTVVALLRAQYQLQTVTRS
Ga0302177_104058971	3300030053	Palsa	LTVGAPAPDADEELELQWLPIEDAIGMLLRGDWNDGKTALALWRAQYQLQL
Ga0311370_124632182	3300030503	Palsa	RELQVGEASPDADEELEIRWLPLDEAIGHVLKGEWNDGKTAMALQRALYQMQL
Ga0302311_107816082	3300030739	Palsa	LDVGEPSPDADEELEVQWVPFGQVMGHIQQGEWNDGKTAMALLRAQYQLQL
Ga0265461_121085802	3300030743	Soil	GLQWLPMSDAVAKVLKGEWNDGKTALGLWRAQYHLRL
Ga0265741_1017243	3300030814	Soil	LYLAGDLEVGAASPDADEELELKWLPLDQAINHVLKGEWNDGKTAMALWRAQYQLQM
Ga0265773_10464501	3300031018	Soil	AASPDADEELDLKWLPLEQAVNHVLKGEWTDGKTALGLWRAQNELHV
Ga0302308_107856731	3300031027	Palsa	ELDVGAPAPDPDEELEVQWVSFGDALGRIQQGEWNDGKTAMALLRAQYQLQL
Ga0170834_1072722303	3300031057	Forest Soil	ADEELDLKWLPLDEAINHVLSGDWNDGKTALALWRAQYQLQM
Ga0170834_1140830811	3300031057	Forest Soil	VGAPSPDADEELELKWLPLDEAIGHVLEGDWNDGKTALALWRAQYQLQM
Ga0170823_151947991	3300031128	Forest Soil	DEELELKWLPLDEAIAHVLEGDWNDGKTALALWRAQYQLQM
Ga0170824_1177118552	3300031231	Forest Soil	GAASPDVDEELELEWVPLGEALGRVLRGEWNDGKTAMALARAQYHLQL
Ga0170824_1191211803	3300031231	Forest Soil	DLEVQWLPLQEAVARVLRCDWNDGKTALALWRAQYQLHL
Ga0170820_108842672	3300031446	Forest Soil	AAPDADEELELQWLPLEEAVARVLRCDWNDGKTALALWRAQYQLQL
Ga0302320_101990205	3300031524	Bog	RDLAVGEADPDVDEELELEWLPIDEAVARVNRGEWNDGKTAMALMRAQYHLQL
Ga0302326_137041772	3300031525	Palsa	EDLKIGQPKPDADEELELKWLPLEEAWKLVLCGEWNDGKTALGLARAQWHLQL
Ga0265313_104203562	3300031595	Rhizosphere	LARGLTVGAANPDSDEELEIKWLPLGEAIDHVLRGDWNDGKTALALWRAQFQLQP
Ga0310686_1153103383	3300031708	Soil	QVGTPTPDGDEELELQWMPLSQAAGMVLRGEWSDGKTALGLLRAQYHLQL
Ga0307476_113958902	3300031715	Hardwood Forest Soil	RDLEVGAASPDADEELELKWLPLDQAINHVLKGEWNDGKTAMALWRAQYQLQM
Ga0307475_113622181	3300031754	Hardwood Forest Soil	GASSPDPDEELELKWFPLDDAIGHVLKGDWNDGKTAMALWRAQYQLQM
Ga0311301_130281471	3300032160	Peatlands Soil	DADEELELAWMPIDEAVDKILRGEWSDGKTALALLRAQYHLQM
Ga0307470_119200182	3300032174	Hardwood Forest Soil	IQWLPLRDAAELVLRGEWNDGKTALGLWRAQYHLQL
Ga0334810_011225_2194_2355	3300033890	Soil	RELDVGPAAPDVDEELELDWVPLGEAIGRVQRGEWNDGKTAMALMRAQYHLQL
Ga0370514_005326_33_185	3300034199	Untreated Peat Soil	MVGPPAPDSDEDLELQWLPMSDAIAKVVSGEWNDGKTALALWRAQYHLHL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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