Metagenome Family F077996

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077996
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	99 residues
Representative Sequence	MPREEPRAAVLADAAEEVALREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWALSPSKIGAQVSGDTVACWAALERWRESLREGAAA
Number of Associated Samples	108
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.78 %
% of genes near scaffold ends (potentially truncated)	81.20 %
% of genes from short scaffolds (< 2000 bps)	91.45 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.453 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.496 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.11% β-sheet: 16.79% Coil/Unstructured: 48.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain	d1n3la_	1n3l	0.51109

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00482	T2SSF	5.13
PF08811	DUF1800	1.71
PF12072	RNase_Y_N	0.85
PF00111	Fer2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.45 %
Unclassified	root	N/A	8.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.45 %
Unclassified	root	N/A	8.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.45 %
Unclassified	root	N/A	8.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.18 %
Unclassified	root	N/A	8.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.18 %
Unclassified	root	N/A	8.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.32 %
Unclassified	root	N/A	8.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	86.32 %
Unclassified	root	N/A	8.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	86.32 %
Unclassified	root	N/A	8.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig875309	Not Available	653	Open in IMG/M
2170459015\|G14TP7Y02JN94P	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
2170459021\|G14TP7Y01DCXUH	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300000956\|JGI10216J12902_125366869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300003997\|Ga0055466_10221569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300004153\|Ga0063455_100533382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300004153\|Ga0063455_101253926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300004463\|Ga0063356_102593961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300004480\|Ga0062592_100383439	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300004643\|Ga0062591_102311292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300005093\|Ga0062594_101014833	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005328\|Ga0070676_10802260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300005329\|Ga0070683_102321545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005334\|Ga0068869_100682280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300005337\|Ga0070682_100644033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300005340\|Ga0070689_101123788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300005353\|Ga0070669_101264067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300005355\|Ga0070671_101174425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300005438\|Ga0070701_10382596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300005440\|Ga0070705_101796923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005444\|Ga0070694_101097384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300005445\|Ga0070708_101558924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005456\|Ga0070678_101932226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300005546\|Ga0070696_100962207	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	711	Open in IMG/M
3300005548\|Ga0070665_101728875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300005718\|Ga0068866_10489531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300005844\|Ga0068862_101036753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300005886\|Ga0075286_1036501	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005888\|Ga0075289_1031649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300005981\|Ga0081538_10038454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3086	Open in IMG/M
3300005981\|Ga0081538_10306469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300009093\|Ga0105240_11412197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300009101\|Ga0105247_10423211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300009137\|Ga0066709_100362257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1997	Open in IMG/M
3300009545\|Ga0105237_11096452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300010037\|Ga0126304_10595943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300010038\|Ga0126315_10094844	Not Available	1703	Open in IMG/M
3300010038\|Ga0126315_10688882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300010045\|Ga0126311_11496709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300010166\|Ga0126306_11558132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300010375\|Ga0105239_10150129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2601	Open in IMG/M
3300010403\|Ga0134123_11716692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300011000\|Ga0138513_100000252	Not Available	3339	Open in IMG/M
3300011119\|Ga0105246_11746995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300011440\|Ga0137433_1262311	Not Available	563	Open in IMG/M
3300012212\|Ga0150985_118720521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300012355\|Ga0137369_10190013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1597	Open in IMG/M
3300012469\|Ga0150984_119204712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300012893\|Ga0157284_10027180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1164	Open in IMG/M
3300012900\|Ga0157292_10097057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300012911\|Ga0157301_10188613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300012941\|Ga0162652_100099878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012975\|Ga0134110_10621747	Not Available	504	Open in IMG/M
3300013102\|Ga0157371_11344966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300013306\|Ga0163162_11434451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300014263\|Ga0075324_1089513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300014267\|Ga0075313_1103976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300014302\|Ga0075310_1112993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300014488\|Ga0182001_10167225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300014968\|Ga0157379_10259876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1577	Open in IMG/M
3300015372\|Ga0132256_100605743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300015373\|Ga0132257_100162092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2627	Open in IMG/M
3300018028\|Ga0184608_10066698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1451	Open in IMG/M
3300018422\|Ga0190265_10110917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2597	Open in IMG/M
3300018432\|Ga0190275_10140221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2213	Open in IMG/M
3300018465\|Ga0190269_10240937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300018469\|Ga0190270_13425879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300019356\|Ga0173481_10856304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300019767\|Ga0190267_11442322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300020202\|Ga0196964_10507608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300021080\|Ga0210382_10221242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300021344\|Ga0193719_10421742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300021510\|Ga0222621_1016345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1461	Open in IMG/M
3300025164\|Ga0209521_10547718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300025537\|Ga0210061_1038460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300025567\|Ga0210076_1110074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300025792\|Ga0210143_1002903	All Organisms → cellular organisms → Bacteria	3674	Open in IMG/M
3300025792\|Ga0210143_1018685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300025907\|Ga0207645_10664085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300025917\|Ga0207660_11473061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300025920\|Ga0207649_10958116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300025932\|Ga0207690_10357361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
3300025937\|Ga0207669_10227629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1373	Open in IMG/M
3300025938\|Ga0207704_10918007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300025942\|Ga0207689_11728357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300027169\|Ga0209897_1074391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300027876\|Ga0209974_10120680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300027952\|Ga0209889_1041769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300027961\|Ga0209853_1143753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300028705\|Ga0307276_10003266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2479	Open in IMG/M
3300028711\|Ga0307293_10033053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1571	Open in IMG/M
3300028711\|Ga0307293_10284963	Not Available	524	Open in IMG/M
3300028712\|Ga0307285_10045782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300028714\|Ga0307309_10172930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300028719\|Ga0307301_10134251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300028719\|Ga0307301_10189206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300028719\|Ga0307301_10314731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028796\|Ga0307287_10109180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300028807\|Ga0307305_10387144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300028811\|Ga0307292_10078472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1274	Open in IMG/M
3300028819\|Ga0307296_10081038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1730	Open in IMG/M
3300028828\|Ga0307312_10136559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1547	Open in IMG/M
3300028875\|Ga0307289_10485283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300028876\|Ga0307286_10054946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1354	Open in IMG/M
3300028876\|Ga0307286_10359520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300028880\|Ga0307300_10329434	Not Available	522	Open in IMG/M
3300028881\|Ga0307277_10197135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300030336\|Ga0247826_10560395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300030606\|Ga0299906_11318329	Not Available	516	Open in IMG/M
3300031184\|Ga0307499_10170067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300031908\|Ga0310900_10484045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300031940\|Ga0310901_10375736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300031995\|Ga0307409_102520511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032122\|Ga0310895_10097556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300033417\|Ga0214471_11326741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.79%
Host-Associated	Host-Associated	26.50%
Engineered	Engineered	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.10%
Plants	Host-Associated → Plants	26.50%
Aquatic	Environmental → Aquatic	7.69%
Solid Waste	Engineered → Solid Waste	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.40%
Marine	Environmental → Aquatic → Marine	4.27%
Sediment	Environmental → Aquatic → Sediment	2.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.71%
Roots	Host-Associated → Plants → Roots	1.71%
Grass	Engineered → Solid Waste → Grass	1.71%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.30%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.27%
Sand	Environmental → Terrestrial → Soil → Sand	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.71%
Composting	Engineered → Solid Waste → Grass → Composting	1.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.71%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03601590	2124908045	Soil	AALLADAEEEIHLAEEALEDLSPIAVCVNDDSGSALVVYHARLGAGAEPEPDDTKVAELHWAHDLRELGAQVSGDTVACWEALERWKQATREGAAA
4PV_02584810	2170459015	Switchgrass, Maize And Mischanthus Litter	MPRESPRAAVLADAAEEVALAENDLEGFRPVAVCLNDDSGSALVIYHARLREGAEPVPDEAKVAELHWASSPSAIGAQVSGDTVACWEALLRWRESLREGRESLGGLL
4NP_03149100	2170459021	Switchgrass, Maize And Mischanthus Litter	VRRSSPTQRKTIHLAEEALEDLSPIAVCVNDDSGSALVVYHARLGAGAEPEPDDTKVAELHWAHDLRELGAQVSGDTVACWEALERWKQATREGAAA
INPhiseqgaiiFebDRAFT_1055292411	3300000364	Soil	FQLRAASTGRDPLLWTASASGGLMPREEARAAVLADAAEEVTLAEDDLEGFRPVAVCLNDDSGSALVVYHATLRAGAEPVPDESKVAELHWARTXPELGAQVSGDTVACWEALERWRESLREGAAA*
JGI10216J12902_1253668692	3300000956	Soil	LWTASASGGLMPREEARAAVLADAAEEVSLAEDALEGLRPVAVCLNDDSGSALVVYHATLRAGVEPVPDEAKVSELHWASAPSELGAQVSDDTVACWEALERWREALRDGATA*
Ga0055466_102215691	3300003997	Natural And Restored Wetlands	LMPREEPRAAVLADAAEEVSLRDEDLEGLRAVAVCLNDDSGSALVVYHARLRPSVEPVPDESKVAELHWAASPSEIGAQVSGDTVACWDALERWREALREGAAA*
Ga0063455_1005333822	3300004153	Soil	MPREEPRAAVLADAAEEVALREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWALSPSKIGAQVSGDTVACWAALERWRESLREGAAA*
Ga0063455_1012539261	3300004153	Soil	AVLADAAEEMSLAEADLEDFRPVAVCLNDDSGSALVVYHARLRPGAEPVPDESKVGELHWAGAPSELAAQVSGDTVACWDALARWRESVQEGAAA*
Ga0063356_1025939611	3300004463	Arabidopsis Thaliana Rhizosphere	EPRTAVLADAAEEVALREEDLEGFRPVAICLNDDSGSALVVYHARLRAGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWEALERWRGALREGAAA*
Ga0062592_1003834392	3300004480	Soil	GEEPRNAVLVDAAEEVALREDDLEGFRPVAVCVNEGSGSALVVYHARLRPGAEPVPNPERVAELHWASEPAAIGAQVSGDALAAWDALGRARDAEPFGG*
Ga0062591_1023112921	3300004643	Soil	RDPILWTASASGGLTPKEEPREAILADAEEEIALGAHDLEGLRPIAVCLNDDSGSALVVYHARLRPGTEPVPDETKVAELHWATNPSELGAQVSGDTLACWDAFERWREAAKKGAAA*
Ga0062594_1010148331	3300005093	Soil	REDDLEGFRPVAVCVNEGSGSALVVYHARLRPGAEPVPNPERVAELHWASEPAAIGAQVSGDALAAWDALGRARDAEPFGG*
Ga0070676_108022602	3300005328	Miscanthus Rhizosphere	GLMPREEARAAVLADAAEEVALAEDALEGLRPVAVCLNDDSGSALVVYHATLRAGVEPVPDEAKVSELHWASAPSELGAQVSDDTVACWEALERWREASGEGAAA*
Ga0070683_1023215452	3300005329	Corn Rhizosphere	AVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWREALGEGAAA*
Ga0068869_1006822802	3300005334	Miscanthus Rhizosphere	PRTAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWREALGEGAAV*
Ga0070682_1006440331	3300005337	Corn Rhizosphere	SASGGLMPREEPRAAVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0070689_1011237882	3300005340	Switchgrass Rhizosphere	AVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRDSLGEGAAA*
Ga0070669_1012640671	3300005353	Switchgrass Rhizosphere	DPLLWTASASGGLMPREEGRAAVLADAAEEVTLAEDDLEGFRPVAVCLNDDSGSALVVYHATLRAGAEPVPDESKVAELHWARTPPELGAQVSGDTVACWEALERWRESLREGAAA*
Ga0070671_1011744252	3300005355	Switchgrass Rhizosphere	GLMPREEPRTAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRDSLGEGAAA*
Ga0070701_103825961	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PRTAVLADAAEEVALREDDLEGFRAVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWREALGEGAAA*
Ga0070705_1017969232	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ALREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRESLGEGAAA*
Ga0070694_1010973841	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRAASTGRDPLLWTASASGGLMPREEARAAVLADAAEEVTLAEDDLEGFRPVAVCLNDDSGSALVVYHATLRAGAEPVPDESKVAELHWARTPPELGAQVSGDTVACWEALERWRESLREGAAA*
Ga0070708_1015589241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPREEPRTAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALEPWREALGEGAAV*
Ga0070678_1019322262	3300005456	Miscanthus Rhizosphere	MPREEPRTAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRESLGEGAAA*
Ga0070696_1009622072	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	REDDLEGFRPVAVCVNEGSGSALVVYHARLRPGAEPVPNPERVAEIHWASEPAAIGAQVSGDALAAWDALGRARDAEPFGG*
Ga0070665_1017288751	3300005548	Switchgrass Rhizosphere	MPREEPRAAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWREALGEGAAV*
Ga0068866_104895312	3300005718	Miscanthus Rhizosphere	GLMPREEPRAAVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0068862_1010367532	3300005844	Switchgrass Rhizosphere	AEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRTGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRESLGEGAAA*
Ga0075286_10365011	3300005886	Rice Paddy Soil	LWTASASGGLMPREEPRAATLADAAEEISLREEDLEGLRAVALCLNDDSGSALVVYHARLRAGVEPVPDESKVAELHWAASPSAIGAQVSGDTVACWDALERWREALKEGAAA*
Ga0075289_10316492	3300005888	Rice Paddy Soil	ASASGGLTPKEEPRAAVLADAAEEICLAEEDLEDFRPVAVCLNDDSGSALVVYHARLRPGAEPVPDASKVAELHWAGAPSALAAQVSGDTVACWEALTRWRESLRAGAAA*
Ga0081538_100384541	3300005981	Tabebuia Heterophylla Rhizosphere	RAAVLADAAEEIGLDETALDEFRPVAVCLNDDSGSALVVYHATLRPGNEPEPDEAKVAELHWAPGPAELGAQVSGDTVACWEALERWREATHQGAAA*
Ga0081538_103064691	3300005981	Tabebuia Heterophylla Rhizosphere	MPKEEPRAAVLADAAEEIGLDESALDGFRPFAVCVNDDSGSALVVYHAKLLPGNEPEPDETKVAELHWASGPAELGAQVSGDTVACWDALERWRESLCTAGAAA*
Ga0105240_114121971	3300009093	Corn Rhizosphere	AEEMALNEGDLEGFRAIAVCLNDDSGSALVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0105247_104232111	3300009101	Switchgrass Rhizosphere	MPREEPRTAVLADAAEEVALHEDDLEGFRAIALCLNDDTGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWREALEEGAAV*
Ga0066709_1003622571	3300009137	Grasslands Soil	IGRDPLLWTASASGGLTPSEEPLAAVLEDAAEEIGLVGDALEGMRAIAICLNDDSGSALVVFHASLRAGDEPEPDETKVAELHWARSPKELGAQISGDTVACWEALERWREAAREGAAA*
Ga0105237_110964521	3300009545	Corn Rhizosphere	RAAVLADAAEEVVLAEDALEGLRPVAVCLNDDSGSALVVYHATLRAGVEPVPDEAKVSELHWASAPSELGAQVSDDTVACWEALERWREASGEGAAA*
Ga0126304_105959432	3300010037	Serpentine Soil	HAVLADAREEIGLGAADLEALQPTAICMNDDSGSALIVYHARLRAGAEPEPDQVKVAELHWATRPSELGAQVSGDTIACWEAIERRRAEAPEPQKTPR*
Ga0126315_100948444	3300010038	Serpentine Soil	ADAAEEIRLGPDDVEGFAPVAVCVNEDSGSALVVYHARLREGAEPNPSEPKVAELHWAREPADLHAQVSGDTIAAWRALER*
Ga0126315_106888821	3300010038	Serpentine Soil	GGLTPSEQPRTAVLEDAAEEIGLEEDDLEDFRPLAVCVNDDSGSALIVYHARLSPHAEPEPDEKKVAELHWATSPAELGAQVSGDTVACWEALQRWREVNREGATA*
Ga0126311_114967092	3300010045	Serpentine Soil	EAVRSDAEEEIGLSEDDLEDLRPVAVCVNDDSGSALVVYHARLREGAEPNPSEPKVAELHWAREPADLHAQVSGDTIAAWRALER*
Ga0126306_115581322	3300010166	Serpentine Soil	EDPRAAVLADAGEEAGLAENDLESFRAVAVCVNDDSGSALVVYHARLRAGAERVPHETKVAELHWAREPSEIGAQVSGDTTASWEALVGWRGRLQEGAEATAGR*
Ga0105239_101501293	3300010375	Corn Rhizosphere	LMPREEPRAAVLADAAEEMALNEGDLEGFRAIAVCHNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0134123_117166922	3300010403	Terrestrial Soil	AAEEVALREDDLEGFRPVALCVNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREDAAN*
Ga0138513_1000002524	3300011000	Soil	LGADDLEDLRPVAICLNDASGSALVVYQAQLRAGAEPEPDKVKVAELHWAARPSNLRAQVSGDTIACWDAIERRRAQELEPQKTPR*
Ga0105246_117469951	3300011119	Miscanthus Rhizosphere	DAAEEMALNEGDLEGFRAIAVCLNDDSGSALVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0137433_12623111	3300011440	Soil	TEEPRDAVLADAAEELGLGEDDLPGFRPVAVVISDDTGSALVVYHALLREGAEPEPNPTKVAKLFWAASPAELGAQVAADTVSSWDALERWRAPKPAPSA*
Ga0150985_1187205212	3300012212	Avena Fatua Rhizosphere	SGGLTPKEEPRAAVLADAAEEMSLAEADLEDFRPVAVCLNDDSGSALVVYHARLRPGAEPVPDESKVGELHWAGAPSELAAQVSGDTVACWDALARWRESVQEGAAA*
Ga0137369_101900131	3300012355	Vadose Zone Soil	KPGEEPHFAVLADAAEEIGLSEEHLIGFRAVAIVVNDDTGSALVVYHARLAEGVEPWPDPAKVAELQWARDPSTLSGQVSSDTLACWEALERRQAASNRPVGG*
Ga0150984_1192047121	3300012469	Avena Fatua Rhizosphere	REDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWALSPSKIGAQVSGDTVACWAALERWRESLREGAAA*
Ga0157284_100271802	3300012893	Soil	EEVALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRTGAEPVPDESKVAELHWAASPSAIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0157292_100970572	3300012900	Soil	MPREEPRAAVLADAAEEMALNEGDLKGFRPIAVCLNDDSGSALVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA*
Ga0157301_101886132	3300012911	Soil	EVALTDKDLEGFQPVAVCLNDDSGSALVVYHARLREGTEPQPDESKVAELHWAREPSELGAQVSGDTVACWEALERWRESLREGAPSA*
Ga0162652_1000998782	3300012941	Soil	SGGLTPSEQPRTAVLEDAAEEIGLEEDNLEDFRPLAVCVNDDSGSALVVYHARLSPHAEPEPDEKKVAELHWATSPAELGAQVSGDTVACWEALQRWREVTREGATA*
Ga0134110_106217471	3300012975	Grasslands Soil	LRPDEEPRAAVLADAAEEICLDEDALEGVRPIAVCVNDDSGSALVVYRAGLRQGAEPQPDEAKVAELHWARGPDDLGAQISGDTVACWEALERWKDAARTDAAA*
Ga0157371_113449661	3300013102	Corn Rhizosphere	TAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAPVAGDTVACWAALERWRESLREDAAN*
Ga0163162_114344512	3300013306	Switchgrass Rhizosphere	LADAAEEVALAEDALEGLRPVAVCLNDDSGSALVVYHATLRAGVEPVPDEAKVSELHWASAPSELGAQVSDDTVACWEALERWREASGEGAAA*
Ga0075324_10895132	3300014263	Natural And Restored Wetlands	EIALAEDDLPDFQPVAVCVNDDTGSALVVYRASLRPGAEPRPNEIKVAELHWAAQPADIGAQVSADTLAAWHALESWRER*
Ga0075313_11039762	3300014267	Natural And Restored Wetlands	GEEPRSAVLADAAEEIGLAEDDLPDFQPVAVCVNDDTGSALVVYHALLRPGAEPTPNEIKVAELHWAAQPADIGAQVSGDTLAAWHALESWRGR*
Ga0075310_11129931	3300014302	Natural And Restored Wetlands	ADAAEEIALAEDDLPDFQPVAVCVNDDTGSALVVYRASLRPGAEPTPNEIKVAELHWAAQPADIGAQVSADTLAAWHALESWRER*
Ga0182001_101672251	3300014488	Soil	MPREEPRAAILADALEELALGEDDLDGFAPVAVCINDDSGSALVVYHALLRPGAEPSPDAGKVAELQWATGPADLGAQVSGDAVACWDALERWREAARAEATA*
Ga0157379_102598762	3300014968	Switchgrass Rhizosphere	MPREEPRAAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRPGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRESLGEGAAA*
Ga0132256_1006057432	3300015372	Arabidopsis Rhizosphere	TASASGGVMPGEEPRNAVLVDAAEEVALREDDLEGFRPVAVCVNEGSGSALVVYHARLRSGAEPVPNPERVAELHWASEPAAIGAQVSGDALAAWDALGRARDAEPFGG*
Ga0132257_1001620921	3300015373	Arabidopsis Rhizosphere	AVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSAVVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRNSPREGAAA*
Ga0184608_100666982	3300018028	Groundwater Sediment	RGPSIGRDPLLWTASASGGLTPSEQPRTAVLEDAAEEIGLAEDDLEGFRPVAVCVNDDSGSALVVYHARLSPHAEPEPDEKKVAELHWATSPAELGAQVSGDTVACWEALHRWREATREGATA
Ga0190265_101109173	3300018422	Soil	ARDAVLADAAEEIGLGEDDLPGFRPIAIVVNDDTGSALVVYHAGLREGAEPEPDPVKVGELAWAKAPSELGAQVSGDALASWAALERWRTQRAETPA
Ga0190275_101402211	3300018432	Soil	ADAAEEIALEPNDLPGFRPVAVCVNDASGSALVVYHAGLREGAEPLPSEGKVAELHWAPEPGAIGAQVSGDTLAAWQALESWRAVHASKEA
Ga0190269_102409372	3300018465	Soil	ASGGLAPSEQPRTAVLADAAEEIGLDEDDLESFRPVAVCVNDDSGSALVVYHARLLPHAEPEPDETKVGELHWAMSPAELGAQVSGDTVACWEALERWREALREGTAA
Ga0190270_134258791	3300018469	Soil	LADAAEEIGLRGDDLPDLRPVAVCVNDDSGSALVVYRCGLRPGAEPVPDETKVAELHWASAPADIGAQVSGDTLAAWAALEAWREARLAAAN
Ga0173481_108563042	3300019356	Soil	REEPRAAVLADAAEEVALREDDLEGFRPVALCLNDDSGSALVLYHARLRSGAEPVPDPTKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGAAA
Ga0190267_114423221	3300019767	Soil	MPREEPRSAVLADAAEEVAFREDALEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWARSPSEIGAQVSGDTVACWAALERWRESQREGAAA
Ga0196964_105076082	3300020202	Soil	GLAEADLIGFRPVAVVVNDDSGSALVVYHARLRPGAEPQPNETKVAELHWAPSPTAIGAQVSGDTLAAWAALEAWRSTQAPAPA
Ga0210382_102212421	3300021080	Groundwater Sediment	LQAVLADAREEIGLGADDLEDLRPVAICLNDDSGSALVVYQAQLRAGAEPEPDKVKVAELHWAARPSNLRAQVSGDTIACWDAIERRRAQELEPQKTPR
Ga0193719_104217421	3300021344	Soil	LLWTASASGGLAPGEGPLQAVLADAREEIGLGADDLEDLRPVAICLNDDSGSALVVYQAQLRAGAEPEPDKVKVAELHWAARPSNLRAQVSGDTIACWDAIERRRAQELEPQKTPR
Ga0222621_10163452	3300021510	Groundwater Sediment	ADAQEEIALGAQDLEGLQPIAVCLNDDSGSALVVYHARLRSGTEPVPDETKVAELHWANRPSELGAQVSGDTLACWDAFERWREVATEGAAA
Ga0209521_105477182	3300025164	Soil	GLRPGEEPRYAVLADAAEEIGLTEANLEDLRPVAVVANDDTGSALVVYRARLREGVEPRPDETKVAELGWAVSPAGLGGQVSSDTLACWQALERFRSL
Ga0210061_10384602	3300025537	Natural And Restored Wetlands	LMPREEPRAAVLADAAEEVSLRDEDLEGLRAVAVCLNDDSGSALVVYHARLRPSVEPVPDESKVAELHWAASPSEIGAQVSGDTVACWDALERWREALREGAAA
Ga0210076_11100741	3300025567	Natural And Restored Wetlands	VLADAAEEIGLAEDDLPDFQPVAVCVNDDTGSALVVYHALLRPGAEPTPNEIKVAELHWAAQPADIGAQVSGDTLAAWHSLESWRGR
Ga0210143_10029031	3300025792	Natural And Restored Wetlands	DAAEEIGLAEDDLPDFQPVAVCVNDDTGSALVVYHALLRPGAEPTPNEIKVAELHWAAQPADIGAQVSGDTLAAWHALESWRGR
Ga0210143_10186852	3300025792	Natural And Restored Wetlands	MPREEPRAAVLADAAEEVSLRDEDLEGLRAVAVCLNDDSGSALVVYHARLRPSVEPVPDESKVAELHWAASPSEIGAQVSGDTVACWDALERWREALREGAAA
Ga0207645_106640852	3300025907	Miscanthus Rhizosphere	ALREDDLEGFRAVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAGGPSEIGAQVSGDTVACWAALERWRESLGEGAAA
Ga0207660_114730611	3300025917	Corn Rhizosphere	VLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA
Ga0207649_109581162	3300025920	Corn Rhizosphere	MPREEPRAAVLADAAEEVGLCEDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSVDTVACWAALERWRDSLGEGAAA
Ga0207690_103573612	3300025932	Corn Rhizosphere	ASASGGLMPREEPRAAVLADAAEEMALNEGDLEGFRAIAVCLNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA
Ga0207669_102276292	3300025937	Miscanthus Rhizosphere	MPREEPRAAVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA
Ga0207704_109180072	3300025938	Miscanthus Rhizosphere	GGLMPREEPRAAVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRAGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA
Ga0207689_117283571	3300025942	Miscanthus Rhizosphere	SASGGLMPREEPRAAVLADAAEEMALNEGDLEGFRPIAVCLNDDSGSALVVYHARLRTGAEPLPDESKVAELHWAASPSDIGAQVSGDTVACWDALERWRDSPREGAAA
Ga0209897_10743912	3300027169	Groundwater Sand	LLADAAEEVGLSADDLPGLRPVAVCVSDDTGSALVVYRAGLREGAEPTPDPVKVAELHWAASPKELGAQISPDTLACWEALERWRAERAEPAPAG
Ga0209974_101206802	3300027876	Arabidopsis Thaliana Rhizosphere	MPREEPRTAVLADAAEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREDAAN
Ga0209889_10417692	3300027952	Groundwater Sand	AEEIGLEEDDLEDFRPVAVCVNDDSGSALVVYHARLLPHAEPEPDETKVAELHWATSPTELGAQVSGDTVACWEALERWREALREGAVA
Ga0209853_11437532	3300027961	Groundwater Sand	ERPRTAVLADAAEEIGLEEDDLEDFRPVAVCVNDDSGSALVVYHARLLPHAEPEPDETKVAELHWATSPTELGAQVSGDTVACWEALERWREALREGAVA
Ga0307276_100032663	3300028705	Soil	MPREEPRTAVLADAAEEVALREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAPSPSAIGAQVSGDTVACWAALERWRESLREGAAA
Ga0307293_100330532	3300028711	Soil	LAEDDLEGFRPVAVCLNDDSGSALVVYHAHLRAGVEPVPDDSKVAELHWARAPSELGAQVSGDTVACWAALERWRESLHENALDS
Ga0307293_102849632	3300028711	Soil	TPSEDPRAAILADAAEEIGLGEDALEHMRPIAVCINDDSGSALVVYHANLQSGAEPEPDETKVAELHWASDLVELGAQVSGDTVACWEALERWRETTREGAAA
Ga0307285_100457822	3300028712	Soil	RTAVLADAAEEVALREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWATSPSEIGAQVSGDTVACWAAIERWRESRREGAAA
Ga0307309_101729302	3300028714	Soil	ADAAEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGAAT
Ga0307301_101342511	3300028719	Soil	DAQEEIALGANDLEGLQPIAVCLNDDSGSALVVYHARLRSGTEPVPDETKVAELHWANRPSELGAQVSGDTLACWDAFERWREVATEGAAA
Ga0307301_101892062	3300028719	Soil	IALREDDLEDFRPVAVCVNEGSGSALVVYHARLRPGVEPVPNPERVAEIHWASEPSAIGAQVSGDALAAWDALGRARDA
Ga0307301_103147311	3300028719	Soil	RDPLLWTASASGGLTPSEQPRTAVLEDAAEEIGLEEDDLEDFRPVAVCVNDDSGSALVVYHARLLPHAEPEPDETKVAELHWATSPAELGAQVSGDTVACWEALERWREALREGAAA
Ga0307287_101091802	3300028796	Soil	AQEEIALGANDLEGLQPIAVCLNDDSGSALVVYHARLRSGTEPVPDETKVAELHWANRPSELGAQVSGDTLACWDAFERWREVATEGAAA
Ga0307305_102839281	3300028807	Soil	PLLWTASASGGLAPGEGPLQAVLADAREEIGLGADDLEDLRPVAICLNDDSGSALVVYQAQLRAGAEPEPDKVKVAELHWAARPSNLRAQVSGDTIACWDAIERRRAQELEPQKTPR
Ga0307305_103871442	3300028807	Soil	ADAAEEVALAEDDLEGFRPIAVCLNDDSGSALVVYHASLREGAEPLPDRAKVAELHWARAPAELGAQVSGDTVACWEALERWRESLREGTAA
Ga0307292_100784722	3300028811	Soil	VLADAAEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGAAT
Ga0307296_100810382	3300028819	Soil	GVMPGEEPRNAVLMDAAEEVALREDDLEDFRPVAVCVNEGSGSALVVYHARLRPGVEPVPNPERVAEIHWASEPSAIGAQVSGDALAAWDALGRARDA
Ga0307312_101365591	3300028828	Soil	SASGGLTPSEEPLAAVLDDAAEEIGLAEDALEDMRPIAICLNDDSGSALVVYHASLRAGAEPEPDETKVAELHWARSPEELGAQISGDTVACWQALERWREASREGAAA
Ga0307289_104852832	3300028875	Soil	TPSEEPRAAILADAAEEIGLGEDALEHMRPIAVCINDDSGSALVVYHANLQSGAEPEPDETKVAELHWASDPVELGAQVSGDTIACWEALERWREATREGAAA
Ga0307286_100549462	3300028876	Soil	FREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGAAT
Ga0307286_103595202	3300028876	Soil	LEGFRPVAVCVNEASGSTLVVYHARLRSGAEPAPNASRVAELYWARDPTSIGAQVSGDTLAAWDALGRARDAEPFGG
Ga0307300_103294341	3300028880	Soil	MPREEPLAAILADAAEEIALGEDDLEALRAVAVCINDDSGSALIVYHARLRAGAEPSPDEAKVAELHWATSLEELGAQISGDTVACWEALERWREATREGDAV
Ga0307277_101971352	3300028881	Soil	RGRSIGRDPLLWTASASGGLTPSEEPRAAILADAAEEIGLGEDALEHMRPIAVCINDDSGSALVVYHANLQSGAEPEPDETKVAELHWASDLVELGAQVSGDTVACWEALERWRETTREGAAA
Ga0247826_105603952	3300030336	Soil	MPREESRTAVLADAGEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWATSPSEIGAQVSGDTVACWAALERWRESLREGATA
Ga0299906_113183292	3300030606	Soil	DAAEEIGLGADDLPGFRPVAVCVNDASGSALVVYHAGLREGAEPLPSEGKVAELHWATEPGAIGAQVSGDTLASWQALEAWRAAHAGAGA
Ga0307499_101700671	3300031184	Soil	MPREEPRTAVLADAAEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGAAT
Ga0310900_104840451	3300031908	Soil	EPRTAVLADAAEEVALHEDDLEGFRAIALCLNDDTGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREDAAT
Ga0310901_103757362	3300031940	Soil	EEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWATSPSEIGAQVSGDTVACWAALERWRESLREGATA
Ga0307409_1025205111	3300031995	Rhizosphere	MPREEPRAAVLADAAEEVALREDDLQGFRPVAVCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREGATD
Ga0310895_100975561	3300032122	Soil	MPREEPRTAVLADAAEEVAFREDDLEGFRPVALCLNDDSGSALVVYHARLRSGAEPVPDETKVAELHWAASPSEIGAQVSGDTVACWAALERWRESLREDAAT
Ga0214471_113267411	3300033417	Soil	RDPLLWTASASGGLMPNEEPRVAVLADAAEEIALAETDLEDFRPAAICLNDDSGSALVVYHATLRAGAEPVPDAAKVAELHWAREPAELAAQVSGDTIAAWAALQRWRAEILESARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077996

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences