Metagenome Family F077998

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077998
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	71 residues
Representative Sequence	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA
Number of Associated Samples	72
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.09 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	96.58 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.940 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.060 % of family members)
Environment Ontology (ENVO)	Unclassified (37.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.00% β-sheet: 24.00% Coil/Unstructured: 58.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF10691	DUF2497	8.55
PF02776	TPP_enzyme_N	4.27
PF00313	CSD	2.56
PF13561	adh_short_C2	2.56
PF06186	DUF992	2.56
PF02781	G6PD_C	2.56
PF13467	RHH_4	1.71
PF00343	Phosphorylase	1.71
PF13505	OMP_b-brl	0.85
PF07007	LprI	0.85
PF04392	ABC_sub_bind	0.85
PF01520	Amidase_3	0.85
PF06057	VirJ	0.85
PF00589	Phage_integrase	0.85
PF01464	SLT	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	2.56
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	1.71
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.85
COG3946	Type IV secretory pathway, VirJ component	Intracellular trafficking, secretion, and vesicular transport [U]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
All Organisms	root	All Organisms	29.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
cellular organisms	root	All Organisms → cellular organisms	29.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.42 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.85 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.42 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.85 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.71 %
Starkeya novella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → Starkeya novella	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.85 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
Ectobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Ectobacillus	0.85 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.94 %
Starkeya novella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → Starkeya novella	1.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Bradyrhizobium sp. JYMT SZCCT0180	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	0.85 %
Bradyrhizobium sp. OK095	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. OK095	0.85 %
Ectobacillus panaciterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Ectobacillus → Ectobacillus panaciterrae	0.85 %
Bradyrhizobium altum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	0.85 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.85 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JZX68	Not Available	507	Open in IMG/M
3300003505\|JGIcombinedJ51221_10006027	All Organisms → cellular organisms → Bacteria → Proteobacteria	3700	Open in IMG/M
3300005332\|Ga0066388_106594397	Not Available	585	Open in IMG/M
3300005332\|Ga0066388_107753520	Not Available	538	Open in IMG/M
3300005332\|Ga0066388_108103796	Not Available	525	Open in IMG/M
3300005435\|Ga0070714_102362342	Not Available	517	Open in IMG/M
3300005764\|Ga0066903_101208133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1404	Open in IMG/M
3300005764\|Ga0066903_101802879	Not Available	1169	Open in IMG/M
3300005764\|Ga0066903_102349297	Not Available	1030	Open in IMG/M
3300005764\|Ga0066903_102755702	Not Available	953	Open in IMG/M
3300005764\|Ga0066903_103354945	Not Available	865	Open in IMG/M
3300005764\|Ga0066903_103892450	Not Available	801	Open in IMG/M
3300005764\|Ga0066903_104763144	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_105948345	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_106811527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Ectobacillus → Ectobacillus panaciterrae	594	Open in IMG/M
3300006059\|Ga0075017_101262871	Not Available	579	Open in IMG/M
3300006086\|Ga0075019_10644320	Not Available	667	Open in IMG/M
3300007982\|Ga0102924_1134446	Not Available	1172	Open in IMG/M
3300009522\|Ga0116218_1020812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium altum	2916	Open in IMG/M
3300009523\|Ga0116221_1052585	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300009672\|Ga0116215_1430146	Not Available	571	Open in IMG/M
3300010046\|Ga0126384_11019770	Not Available	754	Open in IMG/M
3300010047\|Ga0126382_11139530	Not Available	694	Open in IMG/M
3300010048\|Ga0126373_11396974	Not Available	766	Open in IMG/M
3300010343\|Ga0074044_11048910	Not Available	534	Open in IMG/M
3300010358\|Ga0126370_11888098	Not Available	581	Open in IMG/M
3300010361\|Ga0126378_10975307	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010361\|Ga0126378_12174154	Not Available	633	Open in IMG/M
3300010361\|Ga0126378_12574008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300010362\|Ga0126377_12271683	Not Available	619	Open in IMG/M
3300010366\|Ga0126379_11946520	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010366\|Ga0126379_12030136	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_12959024	Not Available	568	Open in IMG/M
3300010376\|Ga0126381_101079095	Not Available	1160	Open in IMG/M
3300010376\|Ga0126381_103012500	Not Available	669	Open in IMG/M
3300010376\|Ga0126381_104255625	Not Available	555	Open in IMG/M
3300010376\|Ga0126381_104936613	Not Available	512	Open in IMG/M
3300010379\|Ga0136449_101083495	Not Available	1277	Open in IMG/M
3300010379\|Ga0136449_102806697	Not Available	687	Open in IMG/M
3300010379\|Ga0136449_103102689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300010398\|Ga0126383_13219460	Not Available	533	Open in IMG/M
3300012181\|Ga0153922_1115958	Not Available	615	Open in IMG/M
3300012957\|Ga0164303_10243949	Not Available	1025	Open in IMG/M
3300012960\|Ga0164301_10489844	Not Available	884	Open in IMG/M
3300012971\|Ga0126369_11571478	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300012971\|Ga0126369_11828485	Not Available	696	Open in IMG/M
3300012971\|Ga0126369_12395592	Not Available	614	Open in IMG/M
3300012985\|Ga0164308_11964414	Not Available	545	Open in IMG/M
3300012986\|Ga0164304_10823017	Not Available	719	Open in IMG/M
3300012989\|Ga0164305_10240188	Not Available	1302	Open in IMG/M
3300015372\|Ga0132256_102517167	Not Available	616	Open in IMG/M
3300016294\|Ga0182041_10050817	All Organisms → cellular organisms → Bacteria → Proteobacteria	2804	Open in IMG/M
3300016294\|Ga0182041_11558967	Not Available	609	Open in IMG/M
3300016319\|Ga0182033_10158318	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300016319\|Ga0182033_10460176	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300016319\|Ga0182033_11621482	Not Available	585	Open in IMG/M
3300016341\|Ga0182035_11041694	Not Available	726	Open in IMG/M
3300016357\|Ga0182032_10440749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1061	Open in IMG/M
3300016371\|Ga0182034_11076028	Not Available	696	Open in IMG/M
3300016387\|Ga0182040_10738393	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300016387\|Ga0182040_10840581	Not Available	758	Open in IMG/M
3300016387\|Ga0182040_11007877	Not Available	695	Open in IMG/M
3300016404\|Ga0182037_10575684	Not Available	953	Open in IMG/M
3300016422\|Ga0182039_10886768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300016422\|Ga0182039_11208216	Not Available	683	Open in IMG/M
3300016445\|Ga0182038_10216580	Not Available	1518	Open in IMG/M
3300016445\|Ga0182038_12110278	Not Available	511	Open in IMG/M
3300017932\|Ga0187814_10394237	Not Available	539	Open in IMG/M
3300017933\|Ga0187801_10343737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300017955\|Ga0187817_10470986	Not Available	801	Open in IMG/M
3300018085\|Ga0187772_11228380	Not Available	553	Open in IMG/M
3300020583\|Ga0210401_10130550	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300020583\|Ga0210401_10182858	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300020583\|Ga0210401_11139157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300021171\|Ga0210405_10403252	Not Available	1077	Open in IMG/M
3300021171\|Ga0210405_10592125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0180	864	Open in IMG/M
3300021180\|Ga0210396_10397471	Not Available	1212	Open in IMG/M
3300021181\|Ga0210388_11745969	Not Available	514	Open in IMG/M
3300021474\|Ga0210390_10598008	Not Available	925	Open in IMG/M
3300021560\|Ga0126371_11825979	Not Available	729	Open in IMG/M
3300021560\|Ga0126371_12450024	Not Available	631	Open in IMG/M
3300022557\|Ga0212123_10554862	Not Available	734	Open in IMG/M
3300027604\|Ga0208324_1112885	Not Available	754	Open in IMG/M
3300027641\|Ga0208827_1120283	Not Available	757	Open in IMG/M
3300031057\|Ga0170834_113992922	Not Available	568	Open in IMG/M
3300031231\|Ga0170824_127850029	Not Available	787	Open in IMG/M
3300031573\|Ga0310915_10578157	Not Available	797	Open in IMG/M
3300031573\|Ga0310915_10740900	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300031573\|Ga0310915_11084631	Not Available	557	Open in IMG/M
3300031718\|Ga0307474_10903470	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031719\|Ga0306917_10658100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → Starkeya novella	824	Open in IMG/M
3300031724\|Ga0318500_10628744	Not Available	545	Open in IMG/M
3300031821\|Ga0318567_10771158	Not Available	545	Open in IMG/M
3300031823\|Ga0307478_10656930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	878	Open in IMG/M
3300031879\|Ga0306919_10734025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300031879\|Ga0306919_10983036	Not Available	646	Open in IMG/M
3300031890\|Ga0306925_10576241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300031890\|Ga0306925_10948349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. OK095	881	Open in IMG/M
3300031890\|Ga0306925_11563637	Not Available	643	Open in IMG/M
3300031897\|Ga0318520_10478799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	767	Open in IMG/M
3300031910\|Ga0306923_10683665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300031910\|Ga0306923_11210606	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300031910\|Ga0306923_12196089	Not Available	554	Open in IMG/M
3300031942\|Ga0310916_11622242	Not Available	525	Open in IMG/M
3300031947\|Ga0310909_11286240	Not Available	589	Open in IMG/M
3300031954\|Ga0306926_12720048	Not Available	537	Open in IMG/M
3300031962\|Ga0307479_11792853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → Starkeya novella	566	Open in IMG/M
3300032059\|Ga0318533_10804793	Not Available	690	Open in IMG/M
3300032060\|Ga0318505_10550796	Not Available	543	Open in IMG/M
3300032076\|Ga0306924_10259238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1997	Open in IMG/M
3300032076\|Ga0306924_11487168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	719	Open in IMG/M
3300032261\|Ga0306920_100983271	Not Available	1230	Open in IMG/M
3300032261\|Ga0306920_101005773	Not Available	1214	Open in IMG/M
3300032261\|Ga0306920_101950330	Not Available	824	Open in IMG/M
3300032261\|Ga0306920_101959292	Not Available	822	Open in IMG/M
3300032261\|Ga0306920_103108607	Not Available	624	Open in IMG/M
3300032261\|Ga0306920_104015406	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	5.98%
Plants	Host-Associated → Plants	0.85%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.71%
Sediment	Environmental → Aquatic → Sediment	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_00296550	2170459003	Grass Soil	MPQYFFSIRAGDDGPPAERAAELCDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA
JGIcombinedJ51221_100060279	3300003505	Forest Soil	MPQYFFTVRASEGDATERAAELNDEAAALAYACEIVRELMQSLALADRNSQVIVRDKTRPIVLSIPFLAACA*
Ga0066388_1065943972	3300005332	Tropical Forest Soil	QMPQYFFAIRASDGEAPERTAELKDDAAALAYACEIVRELVQSLSHSDHGWLVQVRDETRPRVFSIPFFPACA*
Ga0066388_1077535201	3300005332	Tropical Forest Soil	AGDDDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0066388_1081037961	3300005332	Tropical Forest Soil	MPRYIFAIRAGDGDALERAVELNDDTAALAYACEIVRELMQSVARTDRSSLVKVRDETRPMV
Ga0070714_1023623421	3300005435	Agricultural Soil	MPRYTFAIRAGDGDAAERAAELKDDAAAFAHACEIVRELMQGLTHADRSSLMKVRDETRRMVFSIPFLAACA*
Ga0066903_1012081333	3300005764	Tropical Forest Soil	MPKVLRGWGQMPRYIFAIRAGDDDAPERSAELKDDAAALVYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0066903_1018028793	3300005764	Tropical Forest Soil	MPQYFFSIRAGDKDVPAERAAVLNDDAAALAYACEIVRELLQGVGRGDRSSLVQVRDETRRMVLSIPFLAACAQ*
Ga0066903_1023492972	3300005764	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPLFAACA*
Ga0066903_1027557021	3300005764	Tropical Forest Soil	MPQYFFSIRAGNEDALAERTAELNDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAACA*
Ga0066903_1033549452	3300005764	Tropical Forest Soil	VDAKSHIELLHLSGQMPRYIFAIRAGDGDSPERAAELTDDAAALAYACEMIRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0066903_1038924502	3300005764	Tropical Forest Soil	MPQYFFSIRAGNEDTLAERAAELNDDSAALAYACEIGRELMQKLTCIDRNSRVTVRDETRPMVLSIPF
Ga0066903_1047631441	3300005764	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTQVDRSSLVKVRDETRLMVFSIPFFAACA*
Ga0066903_1059483453	3300005764	Tropical Forest Soil	RSYSCLRLCERQCPMPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELVQDLTHADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0066903_1068115271	3300005764	Tropical Forest Soil	MPQYFFTVRASEGDATERAVELNDDAAALAYACDIVRELMENLALTDHSSLVQVRDETRPRVFSIPFFPACA*
Ga0075017_1012628712	3300006059	Watersheds	MPQYFFTVRAGESDADERAAELNDDAAALAYACEIVRELMQSLACTDRSSLVKVRDETRPMVLSIPFLAACA*
Ga0075019_106443202	3300006086	Watersheds	MPQYFFTVRSSESDATERTAELSDDAAALAYACEIVRELMQSLPHTDRSSLVKVRDETRPMVFSIPFLAACA*
Ga0102924_11344463	3300007982	Iron-Sulfur Acid Spring	MPQYFFTVRAGESDADERAAELNDDAAARELMQSLACTDRSSLVKVRDETRPMVLSIPFLAACA*
Ga0116218_10208125	3300009522	Peatlands Soil	MPKSHRASALGGQMPRNIFAIRGSAASERAAELNDDAAALAYACEFVRELMQGLTHADRSSLVKVVDETRPMVFSIPFFAARA*
Ga0116221_10525852	3300009523	Peatlands Soil	MPRNIFAIRGSAASERAAELNDDAAALAYACEFVRELMQGLTHADRSSLVKVVDETRPMVFSIPFFAARA*
Ga0116215_14301461	3300009672	Peatlands Soil	MPRNIFAIRGSAASERAAELNDDAAALAYACEFVRELMQGLTHADRSSLVKVVDETRPMVFSIPFFAA
Ga0126384_110197702	3300010046	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALVYACEIVRELMQGLTPADRSSLVKVRDETRPIVFSIPSFAACA*
Ga0126382_111395301	3300010047	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNHDAAALAYACEIVRELMQGLTPADRNSLVKVRDETRQMVFSIPFFAACA*
Ga0126373_113969741	3300010048	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELVQGLTHADRSSLVKVGDETRPMVFSIPFFAACA*
Ga0074044_110489101	3300010343	Bog Forest Soil	MPHYFFTVQASEGDATERAAELKDDEAALAFACEIVRELTQSLAHTDRTSLVKVRDETRSMVLSIPFLAACA*
Ga0126370_118880981	3300010358	Tropical Forest Soil	QYFFSIRAGDKDVPAERAAVLNDDAAALAYACEIVRELLQGVGRGDRSSLVKVRDETRRMVLSIPFLAACAQ*
Ga0126378_109753073	3300010361	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHVDRSSLVKVRDETRSMVFSIPFVAACA*
Ga0126378_121741541	3300010361	Tropical Forest Soil	MPQYFFSIRAEKEDAMPERVAELKDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAACA*
Ga0126378_125740082	3300010361	Tropical Forest Soil	DAPERAAELNDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA*
Ga0126377_122716831	3300010362	Tropical Forest Soil	MPRYIFAIRAGDGDARERAAVLNDDAAALAYACEIVRELLQGVGRSDRSSLVKVRDETRRMVLSIPFLAACA*
Ga0126379_119465201	3300010366	Tropical Forest Soil	MPQYFFTVRASEGDATERSVELNDDAAALAYACDIVRELMENLALTDHSSLVQVRDETRPRVFSIPFFPACA*
Ga0126379_120301361	3300010366	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTQVDRSSLVKVRDETRPMVLSIPFFAACA*
Ga0126379_129590241	3300010366	Tropical Forest Soil	PQYFFSIRAGDDGTPAERAAELCDDAAAFAYACAIVRELMQGLTHADRRSLVKVRDETRPMVLSVPFFAACA*
Ga0126381_1010790953	3300010376	Tropical Forest Soil	YFFSVRAGNEDALAERTAELNDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAAYA*
Ga0126381_1030125001	3300010376	Tropical Forest Soil	GGQMPRYTFAIRAGDGDAPEHAAELNDDAAALAYACEIVRELMQGLTHADRRSLVRVRDETHAMVFSIPFFAASA*
Ga0126381_1042556251	3300010376	Tropical Forest Soil	MPQYFFTVRASEGDATERAVELNDDAAALAYACDIVRELMENLAHTDHSSLVQVRDETRPRVFSIPFFPACA*
Ga0126381_1049366131	3300010376	Tropical Forest Soil	MPRYIFVIRAGDDDAPERAAELKDDAAALVYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0136449_1010834953	3300010379	Peatlands Soil	MPRYIFAIRAGDDVTPAERAVELCDDAAALAHACEIVRELMLGLTRADRSSLVKVRDETRPMVFSIPFFAACA*
Ga0136449_1028066971	3300010379	Peatlands Soil	MPQYFFTVRAGESDAAERTADLNDDAAALAYACEIVRELMQSLAHTDRSAQVKVRDETRPMVLSIPFLAACA*
Ga0136449_1031026892	3300010379	Peatlands Soil	MPHYFFTVQASEGDATERAAELKDDEAALAFACEIVRELTQSLAHTDRTSLVEVRDETRSMVLSIPFLA
Ga0126383_132194602	3300010398	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTPADRSSLVKVRDETRPIVFSIPFFAACA*
Ga0153922_11159582	3300012181	Attine Ant Fungus Gardens	MPRYVFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHADRRSLVKVSDETRSMVFSIPFFAACA*
Ga0164303_102439491	3300012957	Soil	GDATERAAELNDEAAVLAYACEIVRELMQSLALADRNSQVIVRDKTRPIVLSIPFLAACA
Ga0164301_104898441	3300012960	Soil	MPHYFLTVRATEGDATERAAELSDDAAALAFACEIVRELAQSLAHTDRTSLVKVRDETRPMVLSIPFLAACAAPTRFMVLRS*
Ga0126369_115714782	3300012971	Tropical Forest Soil	RYIFAIRAGDGDAPERTADLNDDAAALAYACEIVRELMQGLTHADRRSLVKVRDETRPMVFSIPFFAACA*
Ga0126369_118284853	3300012971	Tropical Forest Soil	MPQYFFSIRAGNEDTVAERAAELHDDSAALNYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAAYA*
Ga0126369_123955921	3300012971	Tropical Forest Soil	MPRYIFAIRAGDGDAPERAAELHDDAAALAYACEIVRELMQGLTQVDRSSLVKVRDETRLMVFSIPFFAACA*
Ga0164308_119644141	3300012985	Soil	MPHYFFTVRATEGDATERAAELSDDAAALAFACEIVRELAQSLAHTDRTSLVKVRDETRPMVLSIPFLAACA*
Ga0164304_108230171	3300012986	Soil	MPHYFFTVRATEGDATERAAELSDDAAALAFACEIVRELAQSLAHTDRTSLVKVRDETRPMVLSIPF
Ga0164305_102401883	3300012989	Soil	FSIRAGDDGTPAERAVELCDDAAALAHVCEIVRELMLGLTHADRCSLVKVRDETRPMVFSIPFFAACA*
Ga0132256_1025171671	3300015372	Arabidopsis Rhizosphere	MPQYFFAVRDGDGDAPERSADLKDDAAALAYACEIVRELVQSLSHTDHSSLVQVRDETRPRVFSIPFFPACA*
Ga0182041_100508171	3300016294	Soil	MPQYFFSIRAGSEDTLAERAAELKDDSAALAYACEIVRELMQNLTRIDRNSRGTVRDETRPMVLSIPFLAACA
Ga0182041_115589672	3300016294	Soil	MPQYFFSIRAGNEDALAERAAELNDDSAALAYACEIVRELMQTLTCIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0182033_101583181	3300016319	Soil	MPQYFFTVRTGDGDPPERAAELSDDAAALAYACEIVRELGQSLAHIDRSLVKVRDETRQMVFSIPFLAGCA
Ga0182033_104601761	3300016319	Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTPADRSSLVKVRDETRPIAFSIPSFAACA
Ga0182033_116214822	3300016319	Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA
Ga0182035_110416942	3300016341	Soil	MPQYFFTVRTGNGDPPERAAELSDDAAALAYACEIVRELGQSLAHIDRSLVKVRDETHQMVFSIPFLAGCA
Ga0182032_104407492	3300016357	Soil	IRAGYRDAPEPAAELNDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA
Ga0182034_110760281	3300016371	Soil	MCCRHGGHCPRGYMPQYFFSIRAGNEDTLAERAAELNDDSAALAYACEIVRELMQNLTRIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0182040_107383931	3300016387	Soil	MPRYIFAIRAGDGDAPERAAELHDDAAALAYACEIVRELMQGLAQADRSSLAKVRDETRSMVFSIPFFAACA
Ga0182040_108405812	3300016387	Soil	MPQYFFSIRAGSEDTLAERAAELKDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAAYA
Ga0182040_110078772	3300016387	Soil	MPQYYFSIRAGNEDTPAERAAELNDDSAALAYACEIVRELMQTLTCIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0182037_105756842	3300016404	Soil	MPQYFFTVRTGIGDPPERAAELSDDAAALAYACEIVRELGQSLAHIDRSLVKVRDETRQMVFSIPFLAGCA
Ga0182039_108867683	3300016422	Soil	MPQYFFTVRTGNGDPPECAAELSDDTAALAYACEIVRELGQSLAHIDRSLVKVRDETHQMVFSIPFLAGCA
Ga0182039_112082162	3300016422	Soil	MPQYFFSIRAENEDAMPERVAELKDDSAALDYACEIVRELMRNLACIDRNSRVTVRDETRPMVLSIPFLAAYA
Ga0182038_102165802	3300016445	Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHPDRSSLVKVRDETRPMVFSIPFFAACA
Ga0182038_121102781	3300016445	Soil	MPQYFFSIRAGSEDTLAERAAELKDDSAALAYACEIVRELMQNLTRIDRNSRVTVRDETRPMVLS
Ga0187814_103942371	3300017932	Freshwater Sediment	MPHYFFTVRASEGDATERAAELKDDEAALAFACEIVRELTQSLAHTDRTSLVKVRDETRS
Ga0187801_103437372	3300017933	Freshwater Sediment	MPQYIFAIRAGDGDAAERAAELKDEAAAFAHACEIVRELMQGLTHADRSSLVKVRDETRRMVFSIPFLAACA
Ga0187817_104709861	3300017955	Freshwater Sediment	MPRYVFAIRAGDRDAPERAAELNDDAAAFAYACEMVRELMQGLTHADRSSLVKVRDETRRMVFSIPFLAACA
Ga0187772_112283801	3300018085	Tropical Peatland	MPQYFLGIRVGDEAGPTEHAAELSDDAAAFAHACRIVQELVQSLTHADSNSLVEVRDEARPRVFSIPFFPACA
Ga0210401_101305505	3300020583	Soil	MPQYFFSIRAGDDGPPAERAAELCDDAAALAHACEIVRELMQGLTHPDRSSLVKVRDETRPMVFSIPFFAACA
Ga0210401_101828584	3300020583	Soil	MPQYFFTVRASEGDATERAAELNDEAAALAYACEIVRELMQSLALADRNSQVIVRDKTRPIVLSIPFLAACA
Ga0210401_111391571	3300020583	Soil	MPRYVFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHADRRSLVKVSDETRSMVFSIPFFAACA
Ga0210405_104032522	3300021171	Soil	MPRYFFSIRAGDDGTAAERAVELCDDAAALAHACEIVRELMQGLTHADRGSLVKVRDETRPM
Ga0210405_105921252	3300021171	Soil	MLQYFFSIRAGDDGPPAERTVELCDDAAALAHACEIVRELMPGLTHADRSSLVKVRVFSIPFFAACA
Ga0210396_103974711	3300021180	Soil	MPRYFFSIRAGDDGTAAERAVELCDDAAALAHACEIVRELMQGLTHADRGSLVKVRDETRPMVFSIPFFAACA
Ga0210388_117459692	3300021181	Soil	MPQYFFSIRAGDDGPPAERAAELCDDAAALAYACEIVRELMQGLTHPDRSSLVKVRDETRPMVFSI
Ga0210390_105980081	3300021474	Soil	MPQYFLTVRSSESDATERTAELSDDAAALAYACEMVRELMQSLAHTDRSSLVKVRDETRPMVFSIPFLAACA
Ga0126371_118259791	3300021560	Tropical Forest Soil	MPQYVFTIRAPNEDTLAERAAELKDDSAALAYACEIVRELMQNLTRIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0126371_124500243	3300021560	Tropical Forest Soil	RAGNEDALAERTAELNDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0212123_105548621	3300022557	Iron-Sulfur Acid Spring	MPQYFFTVRRGDGDAPERAAELSDDAAALAFAYEIIRELTKTGIASTHPGSLVKVSDETCPMVLSIPFLAACA
Ga0208324_11128851	3300027604	Peatlands Soil	HRASALGGQMPRNIFAIRGSAASERAAELNDDAAALAYACEFVRELMQGLTHADRSSLVKVVDETRPMVFSIPFFAARA
Ga0208827_11202832	3300027641	Peatlands Soil	MPRNIFAIRGSAASERAAELNDDAAALAYACEFVRELMQGLTHADRSSLVKVVDETRPMVFSIPFFAARA
Ga0170834_1139929221	3300031057	Forest Soil	MPQYFFTVRSSESDTTERTAELSDDAAALAYACEIVRELMQSLAHTDRSSLVKVRDETRPMVFSIPFLAACA
Ga0170824_1278500292	3300031231	Forest Soil	MPQYFFTVRSSESDATERTAELSDDAAALAYACEIVRELMQSLAHTDRSSLVKVRDETRPMVFSIPFLAACA
Ga0310915_105781571	3300031573	Soil	MPQYFFTVRTGNGDPPECAAELSDDAAALAYACEIVRELGQSLAHIDRSLVKVRDETRQMVFSIPFLAGCA
Ga0310915_107409002	3300031573	Soil	MPKATESFCTRGGQMPRYIFAIRAGNGDAPERAADLTDDAAALAYACEIVRELMQGLTPADRSSLVKVRDETRPIAC
Ga0310915_110846311	3300031573	Soil	MPQYFFSIRAGDDGPPAERAAELCDDAAALAYACEIARELMQGLTHADRSSLVKVRDETRPMVFSISFFAACA
Ga0307474_109034701	3300031718	Hardwood Forest Soil	VRAGNRDAPERAAELSDDAAALAYACEIVREVMQSLACTHRGSLVKVRDETRPMVLSIPFLAACA
Ga0306917_106581001	3300031719	Soil	MPRYIFAIRAGYRDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA
Ga0318500_106287442	3300031724	Soil	MPQYFFSIRAENEDAMPERVAELKDDSAALDYAYEIVRELMRNLTCIDRNSRVTVRDESRPMVLSIPFLAAYA
Ga0318567_107711581	3300031821	Soil	MPRYIFAIRAGDGYAPERAAELNDDAAALAYACEIVRELMQGLTHADRRSLVKVRDETRPMVFSIPFFAACVDFPRQKPFCNITSR
Ga0307478_106569302	3300031823	Hardwood Forest Soil	MPQYFFSIRAGGDGTPAERAAELCDDAAAFAHACEIARKLMQGLTHADRSSLVKVRDETRPTVFSIPLL
Ga0306919_107340252	3300031879	Soil	GGQMPRYIFAIRAGYRDAPEPAAELNDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA
Ga0306919_109830362	3300031879	Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTPADRSSLVKVRDET
Ga0306925_105762412	3300031890	Soil	MPRYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTHVDRSSLVKVRDETRSMVFSIPFFAACA
Ga0306925_109483491	3300031890	Soil	MPWYIFAIRAGDGDAPERAAELNDDAAALAYACEIVRELMQGLTPADRSSLVKVRDETRPIAFSIPSFAACA
Ga0306925_115636373	3300031890	Soil	MPQYFFTVRTGNGDPPERAAELSDDAAALAYACEIVRELGQSLAHIDRSLVRVRDETRQMVFSIPFLAGCA
Ga0318520_104787993	3300031897	Soil	MPRYIFAIRAGYRDAPERAAELNDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA
Ga0306923_106836652	3300031910	Soil	MPRYIFAIRAGYRDAPEPAAELNDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA
Ga0306923_112106062	3300031910	Soil	MPRYIFAIRAGNGDAPERAAELTDDAAALAYACEIVRELMQGLAQADRSSLAKVRDETRSMVFSIPFFAACA
Ga0306923_121960891	3300031910	Soil	MPRYIFAIRAGNGDAPERAAELNNDAAALAYACEIVRELMQGLTHVDRSSLVKVRDETRSMVFSIPFFAACA
Ga0310916_116222421	3300031942	Soil	MPRYIFAIRAGNGDAPERAAELNNDAAALAYACEIVRELMQGLAQADRSSLAKVRDETRSMVFSIPFFAACA
Ga0310909_112862401	3300031947	Soil	MPQYFFTVRTGNGDPPECAAELSDDTAALAYACEIVRELGQSLAHIDRSLVKVRDETRQMVFSIPFLAGCA
Ga0306926_127200481	3300031954	Soil	MPRYIFAIRAGYRDAPERAAELTDDAAALAYACEMVRELMQGLTPADHSSMVKVRDETRPMVFSIPFFAACA
Ga0307479_117928532	3300031962	Hardwood Forest Soil	GGQMPRYIFAIRAGDGDAPERAAELCDDAAAFAHACGIVRELMQGLSHADSSSLVKVSDETRPMVFSIPFFAACA
Ga0318533_108047931	3300032059	Soil	MVARGRLGMPQYFFTIRAGDEGTPAERAAELKDDAAALVHACEIARELMQSLTHIYRSSLVKVRDETRSMVFSIPFLAACA
Ga0318505_105507961	3300032060	Soil	MPQYVFTIRAPNEDTLAERAAELKDDSAALAYACEIVRELMQNLTRIDRNSRVTVRDET
Ga0306924_102592381	3300032076	Soil	MPQYFFSIRAENEDAMPERVAELKDDSAALDYAYEIVRELMRNLTCIDRNS
Ga0306924_114871681	3300032076	Soil	MPRYIFAIRAGDDDAPERAAELNDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPMVFSIPFFAACA
Ga0306920_1009832712	3300032261	Soil	MPQYFFSIRAGDKDAYAERAAVLNDDAAVLAYACEIVRELLQGVGRSDRSSLLKVRDETRRMVLSIPFLAA
Ga0306920_1010057731	3300032261	Soil	MPQYFFSIRAENEDAMPERVAELKDDSAALDYACEIVRELMRNLTWIDRNSRVTVRDESRPMVLSIPFLAACA
Ga0306920_1019503302	3300032261	Soil	MPRYIFAIRAGDGDAPERAAELHDDAAALAYACEIVRELMQGLTHADRSSLVKVRDETRPIVFSIPFFAACA
Ga0306920_1019592921	3300032261	Soil	MPQYFFSIRAGNEDTLAERAAELNDDSAALAYACEIVRELMQNLTCIDRNSRVTVRDETRPMVLSIPFLAACA
Ga0306920_1031086071	3300032261	Soil	GLWAEGNMPQYFFTIRAGDEGTPTERAAELSDDAAALAHACKIARELMQSLTHADRNSLVRRTS
Ga0306920_1040154062	3300032261	Soil	MPQYFFSIRAGNEDALAERASELKDDSAALAYACEIVRELMQNLTRIDRNSRVTVRDETRPMVLSIPFLAACA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences