Metagenome / Metatranscriptome Family F078086

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	154 residues
Representative Sequence	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Number of Associated Samples	53
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	55.17 %
% of genes from short scaffolds (< 2000 bps)	98.28 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.552 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (56.035 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (80.172 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.85% β-sheet: 0.00% Coil/Unstructured: 72.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13499	EF-hand_7	0.86
PF13847	Methyltransf_31	0.86
PF00400	WD40	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
All Organisms	root	All Organisms	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
cellular organisms	root	All Organisms → cellular organisms	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Amoebozoa	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Evosea	phylum	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Archamoebae	clade	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Mastigamoebida	order	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae → Mastigamoebida	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Entamoebidae	family	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae → Mastigamoebida → Entamoebidae	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.55 %
Entamoeba	genus	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae → Mastigamoebida → Entamoebidae → Entamoeba	1.72 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009869\|Ga0130078_10755537	Not Available	587	Open in IMG/M
3300009871\|Ga0130077_13720719	Not Available	588	Open in IMG/M
3300009872\|Ga0130079_10070172	Not Available	703	Open in IMG/M
3300009872\|Ga0130079_14334567	Not Available	534	Open in IMG/M
3300010974\|Ga0138314_1057943	Not Available	514	Open in IMG/M
3300010974\|Ga0138314_1259093	Not Available	504	Open in IMG/M
3300010976\|Ga0138317_1350631	Not Available	525	Open in IMG/M
3300010977\|Ga0138319_1651730	Not Available	507	Open in IMG/M
3300010980\|Ga0138321_10418282	Not Available	534	Open in IMG/M
3300010998\|Ga0139311_1200951	Not Available	751	Open in IMG/M
3300011006\|Ga0139320_1117032	Not Available	644	Open in IMG/M
3300011008\|Ga0139362_1384177	Not Available	788	Open in IMG/M
3300011008\|Ga0139362_1552869	Not Available	516	Open in IMG/M
3300012007\|Ga0120382_1019082	All Organisms → cellular organisms → Eukaryota → Sar	2071	Open in IMG/M
3300012007\|Ga0120382_1119317	Not Available	707	Open in IMG/M
3300012007\|Ga0120382_1156317	Not Available	596	Open in IMG/M
3300012007\|Ga0120382_1199077	Not Available	508	Open in IMG/M
3300012016\|Ga0120387_1212007	Not Available	642	Open in IMG/M
3300012016\|Ga0120387_1218926	Not Available	629	Open in IMG/M
3300012016\|Ga0120387_1228071	Not Available	612	Open in IMG/M
3300012016\|Ga0120387_1293604	Not Available	516	Open in IMG/M
3300014047\|Ga0120381_1099899	Not Available	719	Open in IMG/M
3300014047\|Ga0120381_1138882	Not Available	586	Open in IMG/M
3300014047\|Ga0120381_1152297	Not Available	551	Open in IMG/M
3300014826\|Ga0120386_1124096	Not Available	576	Open in IMG/M
3300021254\|Ga0223824_10671690	Not Available	815	Open in IMG/M
3300021254\|Ga0223824_10725022	Not Available	771	Open in IMG/M
3300021254\|Ga0223824_10777750	Not Available	732	Open in IMG/M
3300021255\|Ga0223825_11640490	Not Available	671	Open in IMG/M
3300021255\|Ga0223825_11899478	Not Available	685	Open in IMG/M
3300021255\|Ga0223825_12895186	Not Available	756	Open in IMG/M
3300021256\|Ga0223826_10761002	Not Available	714	Open in IMG/M
3300021256\|Ga0223826_10856481	Not Available	653	Open in IMG/M
3300021387\|Ga0223845_10614165	Not Available	507	Open in IMG/M
3300021387\|Ga0223845_11049740	Not Available	619	Open in IMG/M
3300021387\|Ga0223845_11251345	Not Available	685	Open in IMG/M
3300021400\|Ga0224422_10341005	Not Available	857	Open in IMG/M
3300021400\|Ga0224422_10609125	Not Available	606	Open in IMG/M
3300021400\|Ga0224422_12656827	Not Available	749	Open in IMG/M
3300024337\|Ga0255060_10660159	Not Available	530	Open in IMG/M
3300024337\|Ga0255060_10691902	Not Available	518	Open in IMG/M
3300024337\|Ga0255060_10716642	Not Available	509	Open in IMG/M
3300024342\|Ga0255061_10536187	Not Available	613	Open in IMG/M
3300024342\|Ga0255061_10571222	Not Available	593	Open in IMG/M
3300024342\|Ga0255061_10620759	Not Available	567	Open in IMG/M
3300024342\|Ga0255061_10780699	Not Available	502	Open in IMG/M
3300024345\|Ga0255062_10651445	Not Available	514	Open in IMG/M
3300024345\|Ga0255062_10675887	Not Available	504	Open in IMG/M
3300024486\|Ga0255059_10310521	Not Available	733	Open in IMG/M
3300025804\|Ga0256871_1225511	Not Available	501	Open in IMG/M
3300026525\|Ga0256870_1337611	Not Available	534	Open in IMG/M
3300026526\|Ga0256869_1320849	Not Available	590	Open in IMG/M
3300026526\|Ga0256869_1320984	Not Available	590	Open in IMG/M
3300026526\|Ga0256869_1327966	Not Available	580	Open in IMG/M
3300026539\|Ga0256872_10477819	Not Available	550	Open in IMG/M
3300026539\|Ga0256872_10551462	Not Available	501	Open in IMG/M
3300028048\|Ga0256405_10354943	Not Available	850	Open in IMG/M
3300028048\|Ga0256405_10359612	Not Available	842	Open in IMG/M
3300028048\|Ga0256405_10446797	Not Available	707	Open in IMG/M
3300028555\|Ga0302048_1049636	Not Available	514	Open in IMG/M
3300028555\|Ga0302048_1358851	Not Available	504	Open in IMG/M
3300028591\|Ga0247611_11474714	Not Available	665	Open in IMG/M
3300028591\|Ga0247611_11543745	Not Available	644	Open in IMG/M
3300028591\|Ga0247611_11628031	Not Available	621	Open in IMG/M
3300028591\|Ga0247611_11877491	Not Available	562	Open in IMG/M
3300028591\|Ga0247611_12202494	Not Available	502	Open in IMG/M
3300028797\|Ga0265301_10606853	Not Available	808	Open in IMG/M
3300028797\|Ga0265301_10658686	Not Available	771	Open in IMG/M
3300028797\|Ga0265301_10680117	Not Available	756	Open in IMG/M
3300028797\|Ga0265301_10686299	Not Available	752	Open in IMG/M
3300028797\|Ga0265301_10728794	Not Available	726	Open in IMG/M
3300028832\|Ga0265298_10809119	Not Available	826	Open in IMG/M
3300028833\|Ga0247610_11224076	Not Available	742	Open in IMG/M
3300028833\|Ga0247610_12075897	Not Available	517	Open in IMG/M
3300028886\|Ga0256407_10004724	All Organisms → cellular organisms → Eukaryota	22442	Open in IMG/M
3300028886\|Ga0256407_10311690	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae → Mastigamoebida → Entamoebidae → Entamoeba	1293	Open in IMG/M
3300028886\|Ga0256407_10649614	Not Available	760	Open in IMG/M
3300028886\|Ga0256407_10709851	Not Available	709	Open in IMG/M
3300028886\|Ga0256407_10711428	Not Available	708	Open in IMG/M
3300028886\|Ga0256407_11064130	Not Available	511	Open in IMG/M
3300028887\|Ga0265299_10911575	Not Available	735	Open in IMG/M
3300028888\|Ga0247609_11174009	Not Available	777	Open in IMG/M
3300028888\|Ga0247609_11222221	Not Available	757	Open in IMG/M
3300028888\|Ga0247609_11806641	Not Available	583	Open in IMG/M
3300028888\|Ga0247609_12023726	Not Available	538	Open in IMG/M
3300028914\|Ga0265300_10609070	Not Available	744	Open in IMG/M
3300030773\|Ga0061015_10194159	Not Available	506	Open in IMG/M
3300030773\|Ga0061015_11776582	Not Available	598	Open in IMG/M
3300030773\|Ga0061015_11815651	Not Available	502	Open in IMG/M
3300030773\|Ga0061015_11829353	Not Available	504	Open in IMG/M
3300031085\|Ga0061018_10759958	Not Available	537	Open in IMG/M
3300031117\|Ga0061012_12993385	Not Available	561	Open in IMG/M
3300031118\|Ga0061019_14334567	Not Available	534	Open in IMG/M
3300031119\|Ga0061017_10755537	Not Available	587	Open in IMG/M
3300031760\|Ga0326513_10865702	Not Available	806	Open in IMG/M
3300031760\|Ga0326513_11527834	Not Available	569	Open in IMG/M
3300031853\|Ga0326514_11309513	Not Available	611	Open in IMG/M
3300031853\|Ga0326514_11706170	Not Available	514	Open in IMG/M
3300031853\|Ga0326514_11708921	Not Available	513	Open in IMG/M
3300031867\|Ga0326511_10644914	Not Available	1053	Open in IMG/M
3300031867\|Ga0326511_10736709	Not Available	977	Open in IMG/M
3300031867\|Ga0326511_11626836	Not Available	598	Open in IMG/M
3300031993\|Ga0310696_11518713	Not Available	677	Open in IMG/M
3300031993\|Ga0310696_11676838	Not Available	637	Open in IMG/M
3300031994\|Ga0310691_11681227	Not Available	617	Open in IMG/M
3300031994\|Ga0310691_11905510	Not Available	563	Open in IMG/M
3300031998\|Ga0310786_12206475	Not Available	553	Open in IMG/M
3300032007\|Ga0310695_10811648	Not Available	707	Open in IMG/M
3300032007\|Ga0310695_10866606	Not Available	672	Open in IMG/M
3300032030\|Ga0310697_11228632	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Evosea → Archamoebae → Mastigamoebida → Entamoebidae → Entamoeba	727	Open in IMG/M
3300032030\|Ga0310697_11869189	Not Available	543	Open in IMG/M
3300032030\|Ga0310697_11984502	Not Available	520	Open in IMG/M
3300032038\|Ga0326512_11301126	Not Available	518	Open in IMG/M
3300032038\|Ga0326512_11332633	Not Available	509	Open in IMG/M
3300032476\|Ga0352984_1024777	Not Available	512	Open in IMG/M
3300032504\|Ga0352985_1006992	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Foregut	Host-Associated → Mammals → Digestive System → Foregut	100.00%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	85.34%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	14.66%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	56.03%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	14.66%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	12.07%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	10.34%
Moose Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Moose Rumen	3.45%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	3.45%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009869	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Corn Stover. Combined Assembly of Gp0148673, Gp0148674	Host-Associated	Open in IMG/M
3300009871	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Rumen Fluid.Combined Assembly of Gp0148671, Gp0148672	Host-Associated	Open in IMG/M
3300009872	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Switchgrass. Combined Assembly of Gp0148675, Gp0148676	Host-Associated	Open in IMG/M
3300010974	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome) (version 2)	Host-Associated	Open in IMG/M
3300010976	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome) (version 4)	Host-Associated	Open in IMG/M
3300010977	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome) (version 6)	Host-Associated	Open in IMG/M
3300010980	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome) (version 8)	Host-Associated	Open in IMG/M
3300010998	Rumen fluid microbial communities from healthy moose, Palmer, Alaska - F02	Host-Associated	Open in IMG/M
3300011006	Rumen fluid microbial communities from healthy moose, Palmer, Alaska - F08	Host-Associated	Open in IMG/M
3300011008	Rumen microbial communities from healthy moose, Palmer, Alaska. Combined Assembly of Gp0161001, Gp0160600, Gp0160599, Gp0160598	Host-Associated	Open in IMG/M
3300012007	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1009	Host-Associated	Open in IMG/M
3300012016	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1397	Host-Associated	Open in IMG/M
3300014047	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1003	Host-Associated	Open in IMG/M
3300014826	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1366	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300024337	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024342	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024345	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024486	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300025804	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_07 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026525	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_06 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026526	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_05 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026539	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_08 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300028048	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_02	Host-Associated	Open in IMG/M
3300028555	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow X-1 corn stover (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300028887	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02	Host-Associated	Open in IMG/M
3300028888	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300030773	Coassembly of Cow Y Rumen Fluid	Host-Associated	Open in IMG/M
3300031085	Coassembly of Cow X and Y Rumen Fluid	Host-Associated	Open in IMG/M
3300031117	Coassembly of Cow X Rumen Fluid	Host-Associated	Open in IMG/M
3300031118	Coassembly of Cow X and Y Switchgrass	Host-Associated	Open in IMG/M
3300031119	Coassembly of Cow X and Y Corn Stover	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300031993	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032007	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04 (v2)	Host-Associated	Open in IMG/M
3300032030	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M
3300032476	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-1 corn stover (Eukaryote Metatranscriptome)	Host-Associated	Open in IMG/M
3300032504	Metatranscriptome of Cow rumen microbial communities from the University of Illinois at Urbana-Champaign, USA - Cow Y-1 rumen fluid (Eukaryote Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0130078_107555371	3300009869	Rumen	SKDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL*
Ga0130077_137207191	3300009871	Rumen	MSKDKGGDDEEERPRYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0130079_100701721	3300009872	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFESYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL*
Ga0130079_143345671	3300009872	Rumen	PAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL*
Ga0138314_10579431	3300010974	Fungi-Associated Bovine Rumen	KMSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYSWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0138314_12590931	3300010974	Fungi-Associated Bovine Rumen	KDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL*
Ga0138317_13506311	3300010976	Fungi-Associated Bovine Rumen	DKGGDEDEEIVKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYSWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0138319_16517301	3300010977	Fungi-Associated Bovine Rumen	SKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL*
Ga0138321_104182821	3300010980	Fungi-Associated Bovine Rumen	SKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0139311_12009512	3300010998	Moose Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0139320_11170321	3300011006	Moose Rumen	MSKDKGGDEEEIPKYKNSPAQELESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0139362_13841772	3300011008	Moose Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAQKEFETYAQRLQEKNTYFNNTKYPEINSKDIADDKMQTLKKFSGEINNDFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0139362_15528692	3300011008	Moose Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSV
Ga0120382_10190821	3300012007	Sheep Rumen	MSKDKGGDEDEEIVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0120382_11193171	3300012007	Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL*
Ga0120382_11563172	3300012007	Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYD
Ga0120382_11990771	3300012007	Sheep Rumen	NSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL*
Ga0120387_12120071	3300012016	Sheep Rumen	MSKDKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEISNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMRENHNKNSVTREFYDQTHL*
Ga0120387_12189261	3300012016	Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL*
Ga0120387_12280711	3300012016	Sheep Rumen	DKGGDEDEEVVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0120387_12936041	3300012016	Sheep Rumen	MSKDKGDEEEIVKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYHQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0120381_10998991	3300014047	Sheep Rumen	MSKDKGGDEDEEVVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL*
Ga0120381_11388821	3300014047	Sheep Rumen	LNKITKKMSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL*
Ga0120381_11522971	3300014047	Sheep Rumen	MADGDEPEIIKYKNSPAQDLESWKQIQKKIDESFKKTSEKEFELYAQALKDKNTYWTNTKYPEVNSKDLADDKMRTLAKYSGAIKDDNDDDYYCIYCTSKTTPCPHRREREVIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL*
Ga0120386_11240961	3300014826	Sheep Rumen	MSKGKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL*
Ga0223824_106716901	3300021254	Cattle And Sheep Rumen	MSKGEDEEIEKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0223824_107250221	3300021254	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0223824_107777501	3300021254	Cattle And Sheep Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0223825_116404901	3300021255	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNELEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0223825_118994781	3300021255	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0223825_128951861	3300021255	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0223826_107610021	3300021256	Cattle And Sheep Rumen	MSKDKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0223826_108564811	3300021256	Cattle And Sheep Rumen	MSKDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0223845_106141651	3300021387	Cattle And Sheep Rumen	DKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0223845_110497401	3300021387	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0223845_112513451	3300021387	Cattle And Sheep Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIVNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0224422_103410051	3300021400	Cattle And Sheep Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0224422_106091252	3300021400	Cattle And Sheep Rumen	RYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0224422_126568271	3300021400	Cattle And Sheep Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNSYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0255060_106601591	3300024337	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0255060_106919021	3300024337	Rumen	MSKNEDEEIEKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0255060_107166421	3300024337	Rumen	KMSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEISNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0255061_105361871	3300024342	Rumen	IIKKMSKNEDEEIEKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0255061_105712221	3300024342	Rumen	DKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0255061_106207591	3300024342	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAQKEFETYAQRLQEKNTYFNNTKYPEINSKDIADDKMQTLKKFSGEINNDFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0255061_107806991	3300024342	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNVKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYD
Ga0255062_106514451	3300024345	Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIVNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNL
Ga0255062_106758871	3300024345	Rumen	KGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0255059_103105212	3300024486	Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAQKEFETYAQRLQEKNTYFNNTKYPEINSKDIADDKMQTLKKFSGEINNDFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0256871_12255111	3300025804	Rumen	DKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256870_13376111	3300026525	Rumen	DDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256869_13208491	3300026526	Rumen	KMSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0256869_13209841	3300026526	Rumen	SKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0256869_13279661	3300026526	Rumen	DKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256872_104778191	3300026539	Rumen	KDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256872_105514621	3300026539	Rumen	KDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256405_103549431	3300028048	Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0256405_103596121	3300028048	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEISNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMRENHNKNSVTREFYDQTHL
Ga0256405_104467971	3300028048	Rumen	MSDGDEPEIIKYKNSPAQDLEAWRQIQKKIDVSFKKTSEKEFQLYAQALKEKNTYWNNTKYPEVNSKDLADDKMRTLAKYSGAIQDDNKDLDYCIYCTSKETPCFHRRERENIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0302048_10496361	3300028555	Fungi-Associated Bovine Rumen	KMSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYSWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0302048_13588511	3300028555	Fungi-Associated Bovine Rumen	KDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0247611_114747142	3300028591	Rumen	MSKDKGGDEEEVPRYKNSPTQDLESWKQIQHKIDVSFHKTAEKEFEMYAQRLQEKNTYFNNTKYPEINSKDIADDKMRTLKKFSGEINNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFFDQTHL
Ga0247611_115437451	3300028591	Rumen	DEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIVNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0247611_116280311	3300028591	Rumen	DDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0247611_118774911	3300028591	Rumen	MSKDKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQ
Ga0247611_122024941	3300028591	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSS
Ga0265301_106068532	3300028797	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0265301_106586861	3300028797	Rumen	MSKEKGGDEEEVPRYKNSPAQELESWKQIQHKIDKSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGEIVNEYEENNYCIYCTSRITPCPHQRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0265301_106801172	3300028797	Rumen	MSSSKKGKGEEVEIKKYVNSPSQVLEGWKQIQHKNDKSFRKTAQKEFEIYAQKLQEKNSYFNNSKYPETNSKDLANDKMNTIKKFSGEIKNEFDETDYCIFCTSRTTPCPHRRKRENLNEKYIYPITSSSVYGWFKPYDNMQENFNRNSSTREFFDQTHL
Ga0265301_106862991	3300028797	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFESYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0265301_107287941	3300028797	Rumen	MSKNKDGEEEEIKKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFDTYAQKLQEKNTYFNNTKFPEVNSRDIADDKMKSIKKYSGQITSDYDENNYCIYCTSRTTPCPHRRKRENLNEKYEYPITSSSVYGWFKTYDNMQENFNKNSATREFYDSTHL
Ga0265298_108091192	3300028832	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0247610_112240761	3300028833	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0247610_120758971	3300028833	Rumen	MSKDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQEN
Ga0256407_100047244	3300028886	Rumen	MSDGDEPEIIKYKNSPAQDLEAWRQIQKKIDVSFKKTSEKEFQIYAQALKEKNTYWNNTKYPEVNSKDLADDKMRTLAKYSGAIQDDNKDTDYCIYCTSRQTPCFHRRERENIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0256407_103116901	3300028886	Rumen	PEIKKYKNSPAQDLESWKQIQKKIDESFKKTSEKEFELYAQALKDKNTYWTNTKYPEVNSKDLADDKMRTLAKYSGAIKDDNDDNYYCIYCTSKTTPCPHRREREVIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0256407_106496142	3300028886	Rumen	MSKDKGDEEEIVKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYHQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0256407_107098511	3300028886	Rumen	MSKDKGGDEEEIPKYKNSPAQELESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0256407_107114281	3300028886	Rumen	MSKDKGDEEEIVKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYHQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0256407_110641301	3300028886	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNM
Ga0265299_109115752	3300028887	Rumen	MSKNKGGGDEEEIPRYKNSPAQELESWKQIQHKIDKSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEITNDYEENDYCIYCTSRITPCPHRRKRENINEKYEYPITSSSVYGWFKPYDNLQENHNKNSVTREFYDQTHL
Ga0247609_111740092	3300028888	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0247609_112222212	3300028888	Rumen	KDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0247609_118066411	3300028888	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQTH
Ga0247609_120237261	3300028888	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLREKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSTTKEFYDQ
Ga0265300_106090701	3300028914	Rumen	MSKEKGGDEEEVPRYKNSPAQELESWKQIQHKIDKSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTLKKFSGEIVNEYEENNYCIYCTSRITPCPHQRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0061015_101941591	3300030773	Fungi-Associated Bovine Rumen	KMSKDKGGDEDEEVVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0061015_117765821	3300030773	Fungi-Associated Bovine Rumen	MSKDKGGDDEEERPRYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0061015_118156511	3300030773	Fungi-Associated Bovine Rumen	KDKGGDEEEVPRYKNSPTQDLESWKQIQHKIDVSFHKTAEKEFEMYAQRLQEKNTYFNNTKYPEINSKDIADDKMRTLKKFSGEINNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFFDQTHL
Ga0061015_118293531	3300030773	Fungi-Associated Bovine Rumen	KDKGDEEEIVKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYHQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0061018_107599581	3300031085	Fungi-Associated Bovine Rumen	KNIKKMSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFESYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENDYCIYCTSRITPCPHRRKRENLNEKYEYPIT
Ga0061012_129933851	3300031117	Fungi-Associated Bovine Rumen	MSKDKGGDEDEEVVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0061019_143345671	3300031118	Fungi-Associated Bovine Rumen	PAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0061017_107555371	3300031119	Fungi-Associated Bovine Rumen	SKDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0326513_108657021	3300031760	Rumen	MSDGDEPEIIKYKNSPAQDLEAWRQIQKKIDVSFKKSSEKEFQMYAQALKEKNTYWNNTKYPEVNSKDLADDKMRTLAKYSGAIQDDSKDDDYCIYCTSRQTPCFHRRERESIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0326513_115278341	3300031760	Rumen	KGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYQENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0326514_113095131	3300031853	Rumen	LNKITKKMSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0326514_117061701	3300031853	Rumen	MSKDKGGDEEEVPRYKNSPTQDLESWKQIQHKIDVSFHKTAEKEFEMYAQRLQEKNTYFNNTKYPEINSKDIADDKMRTLKKFSGEINNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNK
Ga0326514_117089211	3300031853	Rumen	MSKDKGGDEEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSS
Ga0326511_106449141	3300031867	Rumen	MADGDEPEIKKYKNSPAQDLESWKQIQKKIDESFKKTSEKEFELYAQALKDKNTYWTNTKYPEVNSKDLADDKMRTLAKYSGAIKDDNDDNYYCIYCTSKTTPCPHRREREVIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0326511_107367091	3300031867	Rumen	MSDGDEPEIIKYKNSPAQDLEAWRQIQKKIDVSFKKTSEKEFQLYAQALKEKNTYWNNTKYPEVNSKDLADDKMRTLAKYSGAIQDDNKDIDYCIYCTSKETPCFHRRERENIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0326511_116268361	3300031867	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTK
Ga0310696_115187131	3300031993	Rumen	MSKEKGGDDEEEIKRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYNQRLQEKNTYFNNSKYPEINSKDIADDKMRTIKKFSGEINNDYEENDYCIYCTSRITPCPHRRKRENINEKYVYPITSSSVYGWFKPYDNMQENFNKNSTTREFYDQTHLS
Ga0310696_116768381	3300031993	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDMSFHKTAEKEFETYSQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0310691_116812271	3300031994	Rumen	DKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNLQENFNKNSVTREFYDQTHL
Ga0310691_119055101	3300031994	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEISNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMRENHNKNSVTREFY
Ga0310786_122064752	3300031998	Rumen	MSSSKKGKGEEVEIKKYVNSPSQVLEGWKQIQHKNDKSFRKTAQKEFEIYAQKLQEKNSYFNNSKYPETNSKDLANDKMNTIKKFSGEIKNEFDETDYCIFCTSRTTPCPHRRKRENLNEKYIYPITSSSVYGWFKPYDNMQEN
Ga0310695_108116481	3300032007	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL
Ga0310695_108666061	3300032007	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKPYDNMQENHNKNSTTKEFYDQTHL
Ga0310697_112286321	3300032030	Rumen	KIDVSFKKTSEKEFQIYAQALKEKNTYWNNTKYPEVNSKDLADDKMRTLAKYSGAIQDDNKDTDYCIYCTSRQTPCFHRRERENIKEKFEYPIKSSSVYGWFKPYDNLGENHNKNSVTKSFYDHSHL
Ga0310697_118691891	3300032030	Rumen	MSKDKGGDDEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEAYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIVNDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNLQENFNK
Ga0310697_119845021	3300032030	Rumen	MSKDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFEQYAQRLREKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMQE
Ga0326512_113011261	3300032038	Rumen	MSKDKGGDEEEVPKYKNSPAQDLESWKQIQHKIDVSFHNTAAKEFEQYAQRLKEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEINNEFEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGW
Ga0326512_113326331	3300032038	Rumen	MSKDKGGDDEEVPRYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQKLQEKNTYFNNTKHPEINSKDIADDKMRTIKKFSGEIINDYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSAVYGWFKP
Ga0352984_10247771	3300032476	Fungi-Associated Bovine Rumen	KDKGGDEEEVPKYKNSPAQELESWKQIQHKIDVSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEINSKDIADDKMKTIKKFSGEISNEYEENDYCIYCTSRITPCPHRRKRENLNEKYEYPITSSSVYGWFKPYDNMRENHNKNSVTREFYDQTHL
Ga0352985_10069921	3300032504	Fungi-Associated Bovine Rumen	KMSKDKGGDEDEEIVKYKNSPAQDLESWKQIQHKIDMSFHKTAEKEFETYAQRLQEKNTYFNNTKHPEVNSKDIADDKMRTIKKFSGAINNEYEENDYCIYCTSRITPCPHRRKRENINAKYEYPITSSSVYGWFKPYDNMQENHNKNSVTREFYDQTHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences