Metagenome / Metatranscriptome Family F078465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	108 residues
Representative Sequence	MKTMRTTAKALMGAGNNARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD
Number of Associated Samples	93
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.28 %
% of genes near scaffold ends (potentially truncated)	29.31 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.828 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.931 % of family members)
Environment Ontology (ENVO)	Unclassified (57.759 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.793 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.24% β-sheet: 0.00% Coil/Unstructured: 61.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02954	HTH_8	11.21
PF03486	HI0933_like	6.03
PF00160	Pro_isomerase	4.31
PF04545	Sigma70_r4	1.72
PF14559	TPR_19	1.72
PF13185	GAF_2	1.72
PF01578	Cytochrom_C_asm	1.72
PF00072	Response_reg	0.86
PF03880	DbpA	0.86
PF00011	HSP20	0.86
PF01074	Glyco_hydro_38N	0.86
PF00271	Helicase_C	0.86
PF03070	TENA_THI-4	0.86
PF03009	GDPD	0.86
PF00082	Peptidase_S8	0.86
PF00459	Inositol_P	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	12.07
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	12.07
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	6.03
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	6.03
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	6.03
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	6.03
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	6.03
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	6.03
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	6.03
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	6.03
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	6.03
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	6.03
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	4.31
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.59
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.86
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	84.48 %
Unclassified	root	N/A	5.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.76 %
Unclassified	root	N/A	5.17 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.72 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.72 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.72 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.86 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.72 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.86 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.72 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.86 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.72 %
unclassified Rhodopirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula	0.86 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.86 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	77.59 %
Unclassified	root	N/A	5.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.72 %
Rhodopirellula sp. SM50	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp. SM50	0.86 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101622273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300004479\|Ga0062595_102523658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300004775\|Ga0007798_10042992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1003	Open in IMG/M
3300004776\|Ga0007800_10073739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300005186\|Ga0066676_11007003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300005329\|Ga0070683_101288467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300005330\|Ga0070690_101340369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300005331\|Ga0070670_101054285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300005340\|Ga0070689_100894434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300005354\|Ga0070675_101555934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300005459\|Ga0068867_101985025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300005530\|Ga0070679_102121949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005543\|Ga0070672_102020593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300005553\|Ga0066695_10581700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300005556\|Ga0066707_10473515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	813	Open in IMG/M
3300005557\|Ga0066704_10342945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1003	Open in IMG/M
3300005561\|Ga0066699_10098950	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300005561\|Ga0066699_10384871	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300005564\|Ga0070664_100973421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300005577\|Ga0068857_102062983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005598\|Ga0066706_11474944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005617\|Ga0068859_102165618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300005618\|Ga0068864_102619214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300006796\|Ga0066665_11322060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300006796\|Ga0066665_11654684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300006797\|Ga0066659_10280997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1261	Open in IMG/M
3300006797\|Ga0066659_11118707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300006854\|Ga0075425_100739148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300009012\|Ga0066710_100094123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3975	Open in IMG/M
3300009012\|Ga0066710_101240226	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1156	Open in IMG/M
3300009038\|Ga0099829_10283406	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300009090\|Ga0099827_10448330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1106	Open in IMG/M
3300009094\|Ga0111539_13423656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300009098\|Ga0105245_12664095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300009137\|Ga0066709_100459443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1783	Open in IMG/M
3300009137\|Ga0066709_100471932	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300009137\|Ga0066709_101921010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300009137\|Ga0066709_102634040	Not Available	672	Open in IMG/M
3300009176\|Ga0105242_11758856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300009553\|Ga0105249_12417251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300010379\|Ga0136449_100107471	All Organisms → cellular organisms → Bacteria	5688	Open in IMG/M
3300010399\|Ga0134127_13072617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300010399\|Ga0134127_13118429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300010401\|Ga0134121_12264661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300010401\|Ga0134121_12514612	Not Available	557	Open in IMG/M
3300011119\|Ga0105246_12062650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300011269\|Ga0137392_10384703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1164	Open in IMG/M
3300011270\|Ga0137391_10441839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300012189\|Ga0137388_10435715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1215	Open in IMG/M
3300012199\|Ga0137383_10599832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300012199\|Ga0137383_10969014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300012202\|Ga0137363_10123396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2002	Open in IMG/M
3300012202\|Ga0137363_10873910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300012203\|Ga0137399_10730242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300012205\|Ga0137362_11035708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300012205\|Ga0137362_11517201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012207\|Ga0137381_10700710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300012208\|Ga0137376_10735288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300012209\|Ga0137379_10559742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1051	Open in IMG/M
3300012210\|Ga0137378_11476828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300012211\|Ga0137377_10137461	All Organisms → cellular organisms → Bacteria	2337	Open in IMG/M
3300012349\|Ga0137387_10305408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1151	Open in IMG/M
3300012351\|Ga0137386_10196056	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp. SM50	1450	Open in IMG/M
3300012354\|Ga0137366_11052699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012356\|Ga0137371_10569162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300012357\|Ga0137384_10974557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300012359\|Ga0137385_10927542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012361\|Ga0137360_10263194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1421	Open in IMG/M
3300012361\|Ga0137360_11610857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300012582\|Ga0137358_10282222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1128	Open in IMG/M
3300012582\|Ga0137358_10956939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012685\|Ga0137397_10899718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300012917\|Ga0137395_10400781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	982	Open in IMG/M
3300012917\|Ga0137395_10731567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300012918\|Ga0137396_11199189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300012922\|Ga0137394_10482277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1054	Open in IMG/M
3300012923\|Ga0137359_10046188	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300012923\|Ga0137359_10698849	Not Available	884	Open in IMG/M
3300012923\|Ga0137359_11424883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300012925\|Ga0137419_10375602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1105	Open in IMG/M
3300012929\|Ga0137404_11003436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300012930\|Ga0137407_12280589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300012944\|Ga0137410_12061968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300012976\|Ga0134076_10612057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012984\|Ga0164309_10448225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	975	Open in IMG/M
3300013296\|Ga0157374_11998873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300013297\|Ga0157378_11354190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300013297\|Ga0157378_12150942	Not Available	609	Open in IMG/M
3300013307\|Ga0157372_11690390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300014325\|Ga0163163_10000018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	199503	Open in IMG/M
3300014325\|Ga0163163_10000065	All Organisms → cellular organisms → Bacteria	115460	Open in IMG/M
3300014325\|Ga0163163_12242720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300014326\|Ga0157380_11708275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300015241\|Ga0137418_10435889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1061	Open in IMG/M
3300018431\|Ga0066655_10414229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300020158\|Ga0194038_1009914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3470	Open in IMG/M
3300020163\|Ga0194039_1004573	All Organisms → cellular organisms → Bacteria	6451	Open in IMG/M
3300021070\|Ga0194056_10041579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1758	Open in IMG/M
3300021071\|Ga0194058_10112849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	903	Open in IMG/M
3300021082\|Ga0210380_10346835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300025925\|Ga0207650_11438362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300025936\|Ga0207670_10983715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300025944\|Ga0207661_11139282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300026095\|Ga0207676_10981755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300026557\|Ga0179587_10454962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300028536\|Ga0137415_11466858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300028623\|Ga0257141_1023578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1206	Open in IMG/M
3300028792\|Ga0307504_10388863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300030993\|Ga0308190_1181113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300031058\|Ga0308189_10411413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300031947\|Ga0310909_10774074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300032069\|Ga0315282_10145102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1893	Open in IMG/M
3300032070\|Ga0315279_10043882	All Organisms → cellular organisms → Bacteria	4335	Open in IMG/M
3300032160\|Ga0311301_10556599	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.31%
Host-Associated	Host-Associated	20.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.69%
Plants	Host-Associated → Plants	20.69%
Aquatic	Environmental → Aquatic	8.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.79%
Freshwater	Environmental → Aquatic → Freshwater	7.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.31%
Roots	Host-Associated → Plants → Roots	2.59%
Marine	Environmental → Aquatic → Marine	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.48%
Lake	Environmental → Aquatic → Freshwater → Lake	5.17%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.31%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.45%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.03%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.86%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020158	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-6m	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300021070	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13m	Environmental	Open in IMG/M
3300021071	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17m	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028623	Metatranscriptome of saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_1_27_36m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1016222731	3300004479	Soil	MKTMPTTIKAGADNNAHGRRKPRFDNPNASLFPEPTNQSLTLWPTEKQILDVSKKLTKIGRMGIRAEAHGDYFHSGEMAYQMHEIILATARLFATGQRFQGKTNGD*
Ga0062595_1025236581	3300004479	Soil	RHKRRFDNPGVPPFPEVTNQGLTQWPTEKQILDVSKKLARISRMGIRAEAHGDYFHSGDLAYQMHEIILATARLFATSQRRRLNSNGD*
Ga0007798_100429922	3300004775	Freshwater	MNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIARMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV*
Ga0007800_100737392	3300004776	Freshwater	MGLQRITMKTMRTTTRTLMNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIAQMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV*
Ga0066676_110070031	3300005186	Soil	AKGSSCQQITMKTMRTAAKALRGAGRNARRRRQPRFDNPNVPLFPEAIHQGLTEWPTEKQILDVSKKLAKISRMGIRAEASGDYFYSGDVAYQMHEIILATAQLFERGQRLRRKSNGY*
Ga0070683_1012884671	3300005329	Corn Rhizosphere	MKAMHITVKAGSPNNACSQRKPRYDNPNAFSFPQTTTNQGLTQWPTEKQILNVSKKLAKITQMGIRAETHGDYFHSGDMAYQMHEIILATARLFAIGQRLRRKSNAD*
Ga0070690_1013403692	3300005330	Switchgrass Rhizosphere	MKPMPTTIRARARNNCAPRSQPRFDNPNAPLEATNESLTEWPTEEQILDVSKKLAKISRMAIRAEAHGDYFHSGELAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0070670_1010542851	3300005331	Switchgrass Rhizosphere	SSKLQEEAMRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD*
Ga0070689_1008944341	3300005340	Switchgrass Rhizosphere	MRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD*
Ga0070675_1015559342	3300005354	Miscanthus Rhizosphere	MRAVSTAPRPRNPRVGNPNAVFPEATNQGLTQWPTEKQILDVSKKLAKISRKGIRAEAHGDYFHSGELAYQMHEIILSTAQLFAVGQRFRRRANGD*
Ga0068867_1019850252	3300005459	Miscanthus Rhizosphere	MKPMPTTIRARARNNCAPRSQPRFDNPNAPPEATNESLTEWPTEEQILDVSKKLAKISRMAIRAEAHGDYFHSGELAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0070679_1021219491	3300005530	Corn Rhizosphere	MKAMHIRVKAGSPNNARSQRKPRYDNPNAFSFPQTTTNQGLTQWPTEKQILNVSKKLAKITQMGIRAETHGDYFHSGDMAYQMHEIILATARLFAIGQRLRRKSNAD*
Ga0070672_1020205931	3300005543	Miscanthus Rhizosphere	MKTMLTRTEAGAVNNTRRRKPRFDNPNASLFPEATHQGMTQWPTEKQILDVSKKLARINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRFRRRPNSD*
Ga0066695_105817001	3300005553	Soil	MKTMRTTTKALVGAGNKARQRRKLRFDNPNVPLFPEATNEGLIQWPTEKQIFDVSKQLAKISRMGIRSEASGDYFHSGELAYQMQEIIRATAALFERGRRIRR*
Ga0066707_104735151	3300005556	Soil	QIPMKTMRTTTKALVGAGNKARQRRKLRFDNPNVPLFPEATNEGLIQWPTEKQIFDVSKQLAKISRMGIRSEASGDYFHSGELAYQMQEIIRATAALFERGRRIRR*
Ga0066704_103429451	3300005557	Soil	MVLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNHARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0066699_100989503	3300005561	Soil	MKTIRTTTKTLMGAKNSSPHPPRFENAHVPILPEAAKQRRIQWPSEKQIMDVSKKLAKINRMGIRAEANGDYFNSGDLAYQLQEIIRATAGLFERGRRLQRKTNEE*
Ga0066699_103848712	3300005561	Soil	MIALEQSNSTGKGDRVSGAGLRADIMKTMRTTTKALMGASNDTRRQRKQRFINPDVPLFQEPTNQSLIRWPTEKQISEVSKKLAEISRIGIRAEANGDYFNSGDLAYQMQEIIRTTAGLFERGRRLRR*
Ga0070664_1009734211	3300005564	Corn Rhizosphere	MRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYLHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD*
Ga0068857_1020629831	3300005577	Corn Rhizosphere	TGWGETVITLSSKLQEEAMRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD*
Ga0066706_114749441	3300005598	Soil	SYGLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNNARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0068859_1021656181	3300005617	Switchgrass Rhizosphere	MKTMPKRTEAGAVNHTRRRKPRFDSPSASLFPEATNQGMTQWPTEKQILDVSKKLAKINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRVRRRPNID*
Ga0068864_1026192142	3300005618	Switchgrass Rhizosphere	MRAVSTAPRPRNPRVGNPNSPLFPEATNQGLTQWPTKKQILDVSKKLAKISRMGIRAEAHGDYFHSGDLAYQMHEIILSTAQLFERGERLQRRSNGD*
Ga0066665_113220601	3300006796	Soil	MVLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNNARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLR
Ga0066665_116546841	3300006796	Soil	MGCPHGLIPQGKPDRALVRGCDQIPMKTMRTTTKALVGAGNKARQRRKLRFDNPNVPLFPEATNEGLIQWPTEKQIFDVSKQLAKISRMGIRSEASGDYFHSGELAYQMQEII
Ga0066659_102809972	3300006797	Soil	MKTIRTTTKTLMGAKNSSPHPPRFENAHVPILPEAAKQSRIQWPSEKQIMDVSKKLAKINRMGIRAEANGDYFNSGDLAYQLQEIIRATAGLFERGRRLQRKTNEE*
Ga0066659_111187071	3300006797	Soil	MKTMRTKTKAGAGNNARPRRKPRSNNPGVPLFPEATKQGLIQWPTEKQILDVSKKLAKISRRGIRSEANGDYFYSGDLAYQMHEIILATAQLFKRGQRLRRKSNGKEVKPRIARITAN*
Ga0075425_1007391482	3300006854	Populus Rhizosphere	MKSMPTTIKADAGNNARQRRKPRFDNPNAPLFPEPTNQSLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGNMAYQMHEIILGTAQLFAAGQRFRGRSNGD*
Ga0066710_1000941232	3300009012	Grasslands Soil	MGCPHGLIPQGKPDRALVRGCDQIPMKTMRTTTKALVGAGNKARQRRKLRFDNPNVPLFPEATNEGLIQWPTEKQIFDVSKQLAKISRMGIRSEASGDYFHSGELAYQMQEIIRATAALFERGRRIRR
Ga0066710_1012402262	3300009012	Grasslands Soil	MKIVRTTTKTLMGAGNKALQRRKPRFDSPEMPVFPPETNQGLIQWPTEKQILEVSRQLSKINRLGIRSEASGDYFNSGELAYQMQEIIRATAELLKKGRRIRGHSKLTDRDLVP
Ga0099829_102834062	3300009038	Vadose Zone Soil	MRTKPKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRGKSNGKGVREVREVPRNES*
Ga0099827_104483302	3300009090	Vadose Zone Soil	KSRIPMKTMRIRTKTLMGANRKACQRRKPRFEDGNVPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRIARITAN*
Ga0111539_134236562	3300009094	Populus Rhizosphere	MRAVSTAPRPRNPRVGNPNAVFPEATNQGLTQWPTEKQILDVSKKLAKISRMGIRAEAHGDYFHSGELAYQMHEIILSTAQLFAMGQRFRRRANGD*
Ga0105245_126640951	3300009098	Miscanthus Rhizosphere	MKTTRTAPKFLMGTDNNARGRRKPRFDPNAPLFPEATNQSLTQWPTEKQILDVSKKLAKISRMGIRAEANGDYFHSGDLAYQMHEIILSTAQLFERGQRLQRRSNGD*
Ga0066709_1004594432	3300009137	Grasslands Soil	MTTMRTTPKILLAASNGVYLRRKPRFDNPSAPLSPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQMQEIIKATSGLFERGRRLGRKSQEE*
Ga0066709_1004719322	3300009137	Grasslands Soil	MKTMRTTTKALMGAGNNGRQRRNPRFNNPEMPLFPEPTNQGLIQWPTEKQISDVSKKLAKISRMGIRAEAQGDYFNSGDLAYQMQEIIRATAGLFERGRRLRR*
Ga0066709_1019210101	3300009137	Grasslands Soil	MKTIRTTTKALMAAGNKARQRRKPRSDNPDTPLFPEATNHGLIQWPTEKQILDVSKKLAKISRVGVRSEASGDYFNSGDMAYQMQEIIRATAELFERGQRLRRKSNGN*
Ga0066709_1026340402	3300009137	Grasslands Soil	MKVVHMVLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNHARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSG
Ga0105242_117588561	3300009176	Miscanthus Rhizosphere	MKPMPTTIRARARTNCAPRSKPRFDNPNASLFPEATNESLTQWPTEKQILDVSKKLAKISRMGIRAEAHGDYFHSGELAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0105249_124172511	3300009553	Switchgrass Rhizosphere	RMPRFDKQNDSLFPETSPQGMTQWPTEKQIRDVSKKLGRINRMAIRAEADGDYFHSGDLAYQMHEIIRATAQLFQSGQRIRRRANGDS*
Ga0136449_1001074714	3300010379	Peatlands Soil	MKTMRTTTKRLMNAGNKARQQRKSRFDPRNAPLFPEPANQGLIQWPTEKQIMDVSKQLAKVAQMGIRSEASGDFFNSGDLAYQMQEIIRATADLFHKGQRLRD*
Ga0134127_130726171	3300010399	Terrestrial Soil	MKTTLTRTEAGAVNNTRRRKLRSDNPNASLFPEATYQGMTQWPTERQILDVSKKLAKINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRVRR
Ga0134127_131184292	3300010399	Terrestrial Soil	SDHAKGSIYQQIAMKTTRTAPKFLMGTDNNARGRRKPRFDPNAPLFPEATNQSLTQWPTEKQILDVSKKLAKISRMGIRAEANGDYFHSGDLAYQMHEIILSTTQLFERGQRLQRRSNGD
Ga0134121_122646611	3300010401	Terrestrial Soil	SMKTMRTTAKALMVTGANRRPRRKPRFDNPNDSLFPEVTSQGLTQWPTEKQISDVSKKLAKISRMGIRAEAHGDYFHSGDLAYQMHEIILSTTQLFERGQRLQRRSNGD*
Ga0134121_125146121	3300010401	Terrestrial Soil	MKTMCTTAKSFMGADNNARRRRKPRSDNPFPEATNQGLTQWPTEKQILDVSKKLARIGRMGIRAEIHGDYFHSGELAYQMHEIILATAQLFATGQRFQRRSNGD*
Ga0105246_120626501	3300011119	Miscanthus Rhizosphere	VITLSSKLQEEAMRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHL
Ga0137392_103847032	3300011269	Vadose Zone Soil	MRTKPKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNGD*
Ga0137391_104418392	3300011270	Vadose Zone Soil	MRTKAKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRIARITAN*
Ga0137388_104357151	3300012189	Vadose Zone Soil	MRTKPKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRIARITAN*
Ga0137383_105998321	3300012199	Vadose Zone Soil	MGFHAGDRLGQGFRGCQQIPLKMRQTKTKTLLRAGKKPHRRHKLRFDNHDVPLFPEATYQSLIQWPSEKQIWDVSRKLVKISRMGLRSEAHGDYFNSGDLAYQMHEIIRATADLFERGPRTRRTPR*
Ga0137383_109690141	3300012199	Vadose Zone Soil	MKTMRTAAKALRGAGRNARRRRQTRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNGD*
Ga0137363_101233963	3300012202	Vadose Zone Soil	MKTMRTTTKAGAGNNALRGRKPRSDNPGAPTFPEATNLIQWPTEKQILDVSRKLAQISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137363_108739101	3300012202	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRFVRELR*
Ga0137399_107302421	3300012203	Vadose Zone Soil	NNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNGD*
Ga0137362_110357081	3300012205	Vadose Zone Soil	MKTMRTTPKILLAASNGVHLRRKPRFDNPSAPLSPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQMQEIIKATSGLFERGRRLGRKSQEE*
Ga0137362_115172011	3300012205	Vadose Zone Soil	MKTIRTTTKTLMGAKNSSPHPPRFENAHVPILPEAARQSRIQWPSEKQIMDVSKKLAKINRMGIRAEANGDYFNSGDLAYQLQEIIRATAGLFERGRRLQRKTNEE*
Ga0137381_107007101	3300012207	Vadose Zone Soil	MKTKQTTTTKTGAGNNPRRRHKRRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFKRGQRLRRKSNGKEVKPRIARITAN*
Ga0137376_107352881	3300012208	Vadose Zone Soil	MKTMRTTPKILLAASNGVYLRRKPRFDNPSGPLFPETPNQNRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQVQEIIKATSGLFERGRRLGRKSQEE*
Ga0137379_105597421	3300012209	Vadose Zone Soil	MRTKAKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSRKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRIARITAN*
Ga0137378_105288952	3300012210	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRCFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIIL
Ga0137378_114768281	3300012210	Vadose Zone Soil	MGAGNKALQRRKPRFDSPEMPVFPPETNQGLIQWPTEKQILEVSRQLSKINRLGIRSEASGDYFNSGELAYQMQEIIRATAELLKKGRRIRGHSKLTDRDLVP*
Ga0137377_101374612	3300012211	Vadose Zone Soil	MKVVHMVLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNNARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137387_103054082	3300012349	Vadose Zone Soil	MKTMRTTAKALMGAGNNARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQISDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137386_101960561	3300012351	Vadose Zone Soil	MKTMRTTAKALMGAGNNARRRRKPRFDNPKAPMFPETTNQGLIQWPTEKQILDVSKQLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGK*
Ga0137366_110526991	3300012354	Vadose Zone Soil	MKTMRTTTKAGAGNNALRGRKPRSDNPGAPTFPEATNQGLIEWPTEKQIRDVSKKLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD
Ga0137371_105691621	3300012356	Vadose Zone Soil	KILLAASNGVYLRRKPRFDNPSAPLSPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQMQEIIKATSGLFERGRRLGRKSQEE*
Ga0137384_109745571	3300012357	Vadose Zone Soil	MRTKAKSLMGAGDSARRPRKPRFDNPNAPLFPEATNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFERGQRLRRKSNGY*
Ga0137385_109275421	3300012359	Vadose Zone Soil	MKTKQTTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKISRRGIRSEANGDYFYSGDLAYQMHEIILATAQLFKRGQRLRRKSNGKEVKPRFVRELR*
Ga0137360_102631942	3300012361	Vadose Zone Soil	MPQQKQDRAKGPGAASRKAMKTMRIRTKTLMGANGKACQRRKPRFEDGNVPLFPEATDRGLIQWPTEEQILDVSKQLAEISRVGSRAEASGEYFNSGELAYELQEIIRATAELFKRGQRVRR*
Ga0137360_116108571	3300012361	Vadose Zone Soil	MMMRTTTKTLIGARNKTGQRRKLRLRNSSVPLFPEATYQSLIQWPTEKQIWDVSRKLAKISRMGLRSEAHGDYFSSGDLAYQMHEIIRATAELFERGRRTQRVRRQ*
Ga0137358_102822221	3300012582	Vadose Zone Soil	MRTTTKAGAGNNALRGRKPRSDNPGAPTFPEATNLIQWPTEKQILDVSRKLAQISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137358_103358831	3300012582	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQM
Ga0137358_109569391	3300012582	Vadose Zone Soil	MERADFQVKKVKLRFQGASKYCMKTMRTTPKILLAASNGVHLRRKPRFDNPSAPLSPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQVQEIIKATSGLFERGRRLGRKSQEE*
Ga0137397_108997182	3300012685	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLLATG
Ga0137395_104007812	3300012917	Vadose Zone Soil	DNPGVPLFPEAANQGLTQWPTQKQILDVSKKLVKISRLGIRAEAHGDYFHSGNLAYQMHEIILATAQLFATGQRFRRKSNGKEVKPRIARITAN*
Ga0137395_107315671	3300012917	Vadose Zone Soil	MKTMRTTTKAGARDNALRGRKPRSDNPGAPTFPEATNLIQWPTEKQILDVSRKLAQISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137396_111991891	3300012918	Vadose Zone Soil	MKTKQTTTTKTGADNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRQKSN
Ga0137394_104822772	3300012922	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNED*
Ga0137359_100461884	3300012923	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNGD*
Ga0137359_106988491	3300012923	Vadose Zone Soil	LIPQQKQDRAKGPGAASRKAMKTMRIRTKTLVGANRKACQRRKPRFEDGNVPLFPEATDRGLIRWPTEEQILDVSKQLAEISRVGIRAEASGEYFNSGELAYELQEIIRATAELFKRGQRVRR*
Ga0137359_114248832	3300012923	Vadose Zone Soil	MKTMRTTTKAGAGNNALRGRKPRSDNPGAPTFPEATNLIQWPTEKQILDVSRKLAKISRMGIRSEANGDYFYSGDLAYQMQEIIRVIDQLFERGQ
Ga0137419_103756021	3300012925	Vadose Zone Soil	MERADFQAKEGQAKVPRCKQICMKTMRTTPKILLAASNGVHLRRKPRFDNPSAPLFPETPNQSRIQWPTEKQILDVSKTLAKISRMGIRAESKGDYFNSGDLAYQMQEIIKATSGLFERGRRLGRKAQEE*
Ga0137404_110034361	3300012929	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRCFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNED*
Ga0137407_122805891	3300012930	Vadose Zone Soil	TKAGAGNNALRGRKPRSDNPGAPTFPEATNLIQWPTEKQILDVSRKLAQISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFERGQRLRRKSNGD*
Ga0137410_120619681	3300012944	Vadose Zone Soil	MKTMRTTTKSGAGNNARRPRKPRFDNPNASLFPAATNQGLTQWPTEKQILDVSKRLAKIGRMGIRAEANGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNED*
Ga0134076_106120571	3300012976	Grasslands Soil	MKVVHMVLIPLEKQDRAKGSSCQKISMKTMRTTAKALMGAGNHARRRRKPRFDNPSAPLFPEATNQGLIQWPTEKQILDVSKKLAKISRMGIRAEAHGDYFHSGDLAYQMHEIILATAQLFATGQRLRRKSNGD
Ga0164309_104482251	3300012984	Soil	MKTMSTTIKAGAGNNACRRRKPRFDNPNAPLFPEPTNQSLTQWPTEKQILGVSKKLAKIGQMGIRAEAHGDYFHSGNMAYRMHERILATAQLCAAGQRFRGKSNGD*
Ga0157374_119988731	3300013296	Miscanthus Rhizosphere	SDLIRLGNCDHSKFKLQEVLMKTMLTTTETGAVNNERRRKPRFDNPNASLFPEATYHGMTQWPTEKQILDVSKKLARINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRFRRRPNSD*
Ga0157378_113541901	3300013297	Miscanthus Rhizosphere	MGAVSNAPRPRNPRVGDPNAHLFPEATNQGLTQWPTKKQILDVSKKLAKISAMGIRAEAHGDYFHSGDLAYQMHEIILSTAQLFATGQRFRRRANGD*
Ga0157378_121509421	3300013297	Miscanthus Rhizosphere	PTTKKTGATNNGRQRRKPRFDNPIASLFPEPTNQGLTLWPTQKQILDVSKKLVKIGRMGIRAETHGDYFPSGEMASQMPEIIFATAQLFERGQRRGRKSNGD*
Ga0157372_116903902	3300013307	Corn Rhizosphere	KAGSPNNARSQRKPRYDNPNAFSFPQTTTNQGLTQWPTEKQILNVSKKLAKITQMGIRAETHGDYFHSGDMAYQMHEIILATARLFAIGQRLRRKSNAD*
Ga0163163_1000001858	3300014325	Switchgrass Rhizosphere	MCSSDLIRLGNCDHSKFKLQEVLMKTMLTTTETGAVNNERRRKPRFDNPNASLFPEATYHGMTQWPTEKQILDVSKKLARINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRFRRRPNSD*
Ga0163163_1000006513	3300014325	Switchgrass Rhizosphere	MRAVSTAPRPRNSRVGNPNALFPEETNQGLTQWPTKKQILDVSKKLAKISRMGIRAEAHGDYFHSGDLAYQMHEIILSTAQLFAMGQRFRRRANGD*
Ga0163163_122427201	3300014325	Switchgrass Rhizosphere	MRAVSTAPRPRNPRVGNPNSPLFPEATNQGLTQWPTKKQILDVSKKLVKISRMGIRAEAHGDYFHSGELAYQIHEIILSTAQLFAMGQG
Ga0157380_117082752	3300014326	Switchgrass Rhizosphere	LKTISTKAKSLMRVVSKAPQPRNARVGNPNAPLFPEATNQGLILWPTKKQILDVSKKLAKISRMGIRAEAHGDYFHSGELAYQMHEIILSTAQLFATGQRFRRRSIGD*
Ga0137418_104358892	3300015241	Vadose Zone Soil	MERADFQAKEGQAKVPRCKQICMKTMRTTPKILLAASNGVHLRRKPRFDNPSAPLFPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQVQEIIKATSGLFERGRRLGRKSQEE*
Ga0066655_104142292	3300018431	Grasslands Soil	MKTMRTTPKILLAASNGVYLRRKPRFDNPSAPLSPETPNQSRIQWPTEKQILDVSKKLAKISRMGIRAESKGDYFNSGDLAYQMQEIIKATSGLFERGRRLGRKSQEE
Ga0194038_10099143	3300020158	Anoxic Zone Freshwater	MNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIAQMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV
Ga0194039_10045732	3300020163	Anoxic Zone Freshwater	MGLQRITMKTMRTTTRTLMNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIAQMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV
Ga0194056_100415793	3300021070	Anoxic Zone Freshwater	MGLQRITMKTMRTTTRTLMNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIARMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV
Ga0194058_101128491	3300021071	Anoxic Zone Freshwater	MGLQRITMKTMRTTTRTLMNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTQKQIMDVSKQLARIAQMGIRSEASGDYFNSGELAYQM
Ga0210380_103468351	3300021082	Groundwater Sediment	MKTMRTTEKSRMSTRNNAARRRKPRFDNPIAPLFPEPANPGLIQWPTEKQILDVSKKLAQISRLGIRAEASGDYFHSGEMAYQMHEIILATAQL
Ga0207650_114383621	3300025925	Switchgrass Rhizosphere	GWGETVITLSSKLQEEAMRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD
Ga0207670_109837152	3300025936	Switchgrass Rhizosphere	ITLSSKLQEEAMRITTKAGVTNNTRERRKPRFDKQNDSLFLEASPQGMTQWPSEKQIRDVSKKLARINRMAIRAEADGDYFHSGDLAYQMHEIIRATAHLFQSGQRIRRRANGD
Ga0207661_111392822	3300025944	Corn Rhizosphere	MKAMHITVKAGSPNNACSQRKPRYDNPNAFSFPQTTTNQGLTQWPTEKQILNVSKKLAKITQMGIRAETHGDYFHSGDMAYQMHEIILATARLFAIGQRLRRKSNAD
Ga0207676_109817552	3300026095	Switchgrass Rhizosphere	TMEAGAVNNTRRRKLRSDNPNASLFPEATYQGMTQWPTEKQILDVSKKLAKINRMAIRAEANGDYFHSGDMAYQMHEIIRATAQLFQSGQRVRRRPNID
Ga0179587_104549622	3300026557	Vadose Zone Soil	MKTKQTTTKTGAGNNPRRRHKRRFDNPGVPLFPEVTNQGLTQWPTEKQILDVSKKLAKIGRMGIRAEAHGDYFYSGDLAYQMHEIILATAQLFKRGQRLRRKSNGKEVKPRIARITAN
Ga0137415_114668581	3300028536	Vadose Zone Soil	MKTMRTTTKAGAGNNELRGRKPRSDNPGAPTFPEATNQGLIEWPTEKQILDVSRKLAKISRMGIRSEANGDYFYSGDLAYQMHEIILATAQLFATGQRLRRKSNGD
Ga0257141_10235782	3300028623	Marine	MGLQRITMKTMRTTTRTLMNTGNKARQHHKPRFDSPDAPLFPEPANQGLIQWPTHKQIMDVSKQLARIAQMGIRSEASGDYFNSGELAYQMQEIIRDTAELFHRGQRLREV
Ga0307504_103888631	3300028792	Soil	MKTMCTTAKSLMGADNNARRRKPRSDNPFPEATNQRLTQWPTGKQILDVSKKLAKIGRMGIRAEAQGDYFHSGELAYQMHEIILATAQLFATGQRFQRRSNGD
Ga0308190_11811132	3300030993	Soil	MKTMRTTTKALMGAGRNGRQRRKPYFDNPNAPLFPEPTNQGLIKWPSEKQILDVSKKLAKISRMGIRAEASGDYFNSGDLAYQMQEIIRTTAGLFERGRRLQRKSTED
Ga0308189_104114131	3300031058	Soil	MKTMRTTTKALMGAGRNGRQRRKPYFDNPNAPLFPEPTNQGLIKWPSEKQILDVSKKLARISRMGIRAEASGDYFNSGDLAYQMQEIIRTTAGLFEKGRRLQK
Ga0310909_107740741	3300031947	Soil	MKTMRTVAKGLGNRCSKTGQRRKSRFVNPEVPLFPEPVNESLIQWPTEKQILGVSKQLAQIGRMGVRSEANGDYFHSGELAYQMQEIIRATNALFERGRRIRRSTTPAETH
Ga0315282_101451022	3300032069	Sediment	MKRMRTTTKTLLRAGNPARQRRKLRFDHPTVPLFPEATNRGLIQWPTEKQIAEVSKRLAQIGQIGIRSEASGDYFNSGDLAYQMQEIIRATAELFQRGRRLRR
Ga0315279_100438822	3300032070	Sediment	MKRMRTTTKSLLRAGNNARQRRKLRFDHPPVPLFPEATNRGLIQWPTEKQIAEVSKRLAQIGQIGIRSEASGDYFNSGDLAYQMQEIIRATAELFQRGRRLRR
Ga0311301_105565993	3300032160	Peatlands Soil	MKTMRTTTKRLMNAGNKARQQRKSRFDPRNAPLFPEPANQGLIQWPTEKQIMDVSKQLAKVAQMGIRSEASGDFFNSGDLAYQMQEIIRATADLFHKGQRLRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences