NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078473

Metagenome / Metatranscriptome Family F078473

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078473
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 89 residues
Representative Sequence MRTRLFTILIALMLTGGAYPARAQEAGKIVEQYVKAAGGGRALAKIQTMTLEGSFTSDDGKMGTYTLDTKLPNRYYSELLIGEKNLIEA
Number of Associated Samples 89
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.76 %
% of genes near scaffold ends (potentially truncated) 98.28 %
% of genes from short scaffolds (< 2000 bps) 87.93 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(50.862 % of family members)
Environment Ontology (ENVO) Unclassified
(48.276 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.724 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.33%    β-sheet: 15.38%    Coil/Unstructured: 51.28%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01979Amidohydro_1 45.69
PF13147Obsolete Pfam Family 7.76
PF03551PadR 3.45
PF12704MacB_PCD 2.59
PF02687FtsX 1.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 3.45
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 3.45
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 3.45

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002911|JGI25390J43892_10154602All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300002916|JGI25389J43894_1037162All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300004080|Ga0062385_10015802All Organisms → cellular organisms → Bacteria2713Open in IMG/M
3300004092|Ga0062389_101806279All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300005174|Ga0066680_10441079All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7823Open in IMG/M
3300005175|Ga0066673_10335153All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7883Open in IMG/M
3300005175|Ga0066673_10549707All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300005176|Ga0066679_10701612All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300005179|Ga0066684_10425669All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7892Open in IMG/M
3300005179|Ga0066684_10616953All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7729Open in IMG/M
3300005181|Ga0066678_10730060All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005187|Ga0066675_10067704All Organisms → cellular organisms → Bacteria2261Open in IMG/M
3300005446|Ga0066686_10665464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7706Open in IMG/M
3300005451|Ga0066681_10242775All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300005554|Ga0066661_10519184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7717Open in IMG/M
3300005561|Ga0066699_11148171All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300005568|Ga0066703_10772345All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300005576|Ga0066708_10014235All Organisms → cellular organisms → Bacteria3874Open in IMG/M
3300005576|Ga0066708_10784167All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300006796|Ga0066665_10580816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7905Open in IMG/M
3300007255|Ga0099791_10582342All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300007258|Ga0099793_10293153All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300009088|Ga0099830_11453324All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300009143|Ga0099792_11249232All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300010322|Ga0134084_10068323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71080Open in IMG/M
3300010325|Ga0134064_10490414All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300010326|Ga0134065_10487692All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300011270|Ga0137391_10771821All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7794Open in IMG/M
3300011270|Ga0137391_11574790All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300011271|Ga0137393_10141588All Organisms → cellular organisms → Bacteria → Acidobacteria2000Open in IMG/M
3300011271|Ga0137393_10723485All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium852Open in IMG/M
3300011271|Ga0137393_10922492All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7745Open in IMG/M
3300011444|Ga0137463_1125636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7965Open in IMG/M
3300012198|Ga0137364_11161322All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300012200|Ga0137382_10003018All Organisms → cellular organisms → Bacteria → Acidobacteria7821Open in IMG/M
3300012200|Ga0137382_11016724All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300012202|Ga0137363_10720905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7845Open in IMG/M
3300012202|Ga0137363_11221524All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300012202|Ga0137363_11261833All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300012202|Ga0137363_11605392All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300012203|Ga0137399_10706902All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300012205|Ga0137362_11209238All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300012205|Ga0137362_11209457All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300012207|Ga0137381_10031313All Organisms → cellular organisms → Bacteria → Acidobacteria4295Open in IMG/M
3300012207|Ga0137381_11082015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7690Open in IMG/M
3300012208|Ga0137376_11487591All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300012209|Ga0137379_10131405All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2406Open in IMG/M
3300012351|Ga0137386_11121683All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300012359|Ga0137385_10090834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2708Open in IMG/M
3300012359|Ga0137385_10870123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7746Open in IMG/M
3300012359|Ga0137385_11073108All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7663Open in IMG/M
3300012362|Ga0137361_11362556All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300012363|Ga0137390_10935728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7820Open in IMG/M
3300012582|Ga0137358_10085298All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium2129Open in IMG/M
3300012582|Ga0137358_10294708All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300012582|Ga0137358_10598368All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7740Open in IMG/M
3300012582|Ga0137358_10668581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7695Open in IMG/M
3300012683|Ga0137398_10144032All Organisms → cellular organisms → Bacteria → Acidobacteria1541Open in IMG/M
3300012685|Ga0137397_10605966All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium815Open in IMG/M
3300012685|Ga0137397_10754182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300012685|Ga0137397_11028308All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300012917|Ga0137395_10149460All Organisms → cellular organisms → Bacteria → Acidobacteria1598Open in IMG/M
3300012925|Ga0137419_11752940All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300012927|Ga0137416_10069838All Organisms → cellular organisms → Bacteria → Acidobacteria2544Open in IMG/M
3300012927|Ga0137416_10242703All Organisms → cellular organisms → Bacteria → Acidobacteria1468Open in IMG/M
3300012927|Ga0137416_10805380All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300012927|Ga0137416_11479783All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300012929|Ga0137404_11788099All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300012944|Ga0137410_10815147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300012944|Ga0137410_11435385All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300012976|Ga0134076_10104550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71126Open in IMG/M
3300014157|Ga0134078_10361915All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300015052|Ga0137411_1031316All Organisms → cellular organisms → Bacteria → Acidobacteria1405Open in IMG/M
3300015053|Ga0137405_1127858All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300015054|Ga0137420_1347426All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71094Open in IMG/M
3300018433|Ga0066667_10055349All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis2420Open in IMG/M
3300018433|Ga0066667_11602694All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7580Open in IMG/M
3300018482|Ga0066669_12198546All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300020170|Ga0179594_10268344All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300020199|Ga0179592_10206730All Organisms → cellular organisms → Bacteria → Acidobacteria889Open in IMG/M
3300020580|Ga0210403_10012201All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6957Open in IMG/M
3300020581|Ga0210399_10718081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter821Open in IMG/M
3300021088|Ga0210404_10403465All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7764Open in IMG/M
3300021170|Ga0210400_11043837All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300021433|Ga0210391_11442665All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300021479|Ga0210410_10796941All Organisms → cellular organisms → Bacteria → Acidobacteria830Open in IMG/M
3300024330|Ga0137417_1228613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7941Open in IMG/M
3300025939|Ga0207665_10846083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7724Open in IMG/M
3300026285|Ga0209438_1121172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7732Open in IMG/M
3300026297|Ga0209237_1281345All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300026304|Ga0209240_1050126All Organisms → cellular organisms → Bacteria → Acidobacteria1574Open in IMG/M
3300026309|Ga0209055_1127816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7945Open in IMG/M
3300026317|Ga0209154_1094163All Organisms → cellular organisms → Bacteria → Acidobacteria1281Open in IMG/M
3300026317|Ga0209154_1227288All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7690Open in IMG/M
3300026318|Ga0209471_1293023All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300026334|Ga0209377_1066912All Organisms → cellular organisms → Bacteria → Acidobacteria1557Open in IMG/M
3300026342|Ga0209057_1005049All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9209Open in IMG/M
3300026529|Ga0209806_1308585All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300026530|Ga0209807_1087091All Organisms → cellular organisms → Bacteria → Acidobacteria1372Open in IMG/M
3300026550|Ga0209474_10020751All Organisms → cellular organisms → Bacteria → Acidobacteria5084Open in IMG/M
3300026557|Ga0179587_10363790All Organisms → cellular organisms → Bacteria → Acidobacteria939Open in IMG/M
3300026557|Ga0179587_10505315All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7793Open in IMG/M
3300027643|Ga0209076_1021718All Organisms → cellular organisms → Bacteria → Acidobacteria1749Open in IMG/M
3300027671|Ga0209588_1266761All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300027674|Ga0209118_1179772All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300027678|Ga0209011_1206873All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300027684|Ga0209626_1041892All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300027903|Ga0209488_11169705All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300028536|Ga0137415_10422088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71139Open in IMG/M
3300028536|Ga0137415_11151499All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300029636|Ga0222749_10788394All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300031708|Ga0310686_103539481All Organisms → cellular organisms → Bacteria → Acidobacteria1302Open in IMG/M
3300031715|Ga0307476_10561113All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7846Open in IMG/M
3300031754|Ga0307475_11453209All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300031823|Ga0307478_11787647All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300032205|Ga0307472_100659900All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil50.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.31%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.59%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.72%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25390J43892_1015460223300002911Grasslands SoilMRTRLLVAFIVVTLTAQMRPVRAQEEPGKIVEQYVRAAGGSKALGRIQTLIIEGAFLSEDGKAGTYTLDTKLPNRYYSELLLGEKNLIEAYN
JGI25389J43894_103716223300002916Grasslands SoilMRTRLSIALIALILTAGMHPARAQEEPGKIIDQYVKAAGGGKALSRIQTLSIEGTFTSDDGKTGTYTLDTK
Ga0062385_1001580213300004080Bog Forest SoilMRTRLLISLSVLLSAAAFVPARAQDAQKAVSQYVKAEGGAKALARIQTLTLEGTFTNSADEKPGTYTLDTRLPNRYYSELLLGDKNLIEAYNG
Ga0062389_10180627913300004092Bog Forest SoilMLITGAFLPARAQDVQKIVSQYLKAEGGSKALAKIQTLTLEGTFTNPADDKPGTYTLDLRLPNRYYSELLLGDKNLIEAYNGKSAWQQSASGDPAT
Ga0066680_1044107923300005174SoilMRTRLLIGLIVLIFGSGNHRARAQEEPGKIVEQYTKAAGGKALSRIQTLSIEGTFTSDDGKTGTYTLDTKLPNRYYSE
Ga0066673_1033515323300005175SoilMRARLLTILIALMLTSGAYPAHAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKS
Ga0066673_1054970723300005175SoilMRTRLFIAFIALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALAKIQTLTVEGTFTGVDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNG
Ga0066679_1070161223300005176SoilMRTRLFIALIALIFTVGMHPARAQEEPKKIVEQYVKAAGGSKALGRIQTVTLEGTFTSDDGKTGTYTLDTKLPNRYYSELLAGDKNLIEAYNGKSA
Ga0066684_1042566923300005179SoilMRARLLTILIALMITSGAYPAHAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKS
Ga0066684_1061695313300005179SoilMRTRLLIGLIVLILSSGNHRARAQEEPGKIIDQYVKAAGGKALSRIQTLSIEGTFTSDDGKTGTYTLDTKLPNR
Ga0066678_1073006023300005181SoilMRTRLLIGLIVLILSSGNHRARAQEEPGKIIDQYVKAAGGGKALSRIQTLSIEGTFTSDDGKTGTYTLDTKLPNRYYSELLVGDRNLIEAYNGKSAWHQKA
Ga0066675_1006770433300005187SoilMRARLLTILIALMITSGAYPAHAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSA
Ga0066686_1066546423300005446SoilMRTRPLIALIVLILTAGAYPARAQEEPGKIVDQYVKATGGSKALGRVQTLTLEGAFTSDDGKTGTYTLDTK
Ga0066681_1024277523300005451SoilMRTRLFIAFIALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALAKIQTLTVEGTFTGLDGKSGTYTLDTKLPNRYYSELLVGEKN
Ga0066661_1051918423300005554SoilMRTRLLVGLIVLILAAGMHPARAQEEPGKIIDQYVKAAGGGKALSRIQTLSIEGTFASDDRKTGTYTLDTKLPNRYYSELLVGDRNLIEAYNGKSA
Ga0066699_1114817113300005561SoilMRTRLFIAFIACLLTGGADPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGK
Ga0066703_1077234513300005568SoilMRTRLFNIVVALVLTAGAYPAAAQEAGKIVDQYVKAAGGGRALAKIQTLTLEGTFTTDDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKS
Ga0066708_1001423513300005576SoilMRTRLLVAFIVVTLTAQMRPVRAQEEPGKIVEQYVRAAGGSKALGRIQTLIIEGAFLSEDGKAGTYTLDTKLPNRYYSELL
Ga0066708_1078416723300005576SoilMRTRLLIALIVLILAAGMRPARAQEEPGKIVEQYVKAAGGSKALGRIQTLIVEGAFTSDDGKTGTYTLDTKLPNRYYSELLT
Ga0066665_1058081613300006796SoilMRTRLFIAFIACLLTGGADPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWH
Ga0099791_1058234223300007255Vadose Zone SoilMRTRPFIIVVAIMLTGGTCPACAQEAGKIVEQYVKAAGGGKALARIQTLTLEGAFTSDGGKMGTYTVDTKMPNRYYSELWWAKRT*
Ga0099793_1029315313300007258Vadose Zone SoilMLTGGTYPAPAQDAGKIVEQYVKAAGGARVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELMAGEKNVIEAYNGKSAWHQN
Ga0099830_1145332413300009088Vadose Zone SoilMRARLLTILIALMLTGGAYPARAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFASDGKTGTYTLDTKLPNRYYSELLIGEKNLIEA
Ga0099792_1124923223300009143Vadose Zone SoilMRTRLFIAFIALVLTGEANPARAQEAGRIVEQYVRAVGGGRALARIQTLTLEGTFTSDDRKTGTYTLDTKLPNRYYSELLIGEKNQIEAYNGKSAWH
Ga0134084_1006832313300010322Grasslands SoilMRTRLFIAFIALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSEL
Ga0134064_1049041423300010325Grasslands SoilMRTRLLVAFIVVTLTAQMRPVRAQEEPGKIVEQYVRAAGGSKALGRIQTLIIEGAFLSEDGKAGTYTLDTKLPNRYYSEL
Ga0134065_1048769213300010326Grasslands SoilMRTRLFIAFIALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALTKIQTLTLEGTLTGVDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNG
Ga0137391_1077182113300011270Vadose Zone SoilMIPMRTRLLTILIASVLTTEVLPVHAQEAGKIVDQYVKAAGGGKALARIQTLTLEGTFTTDDGKSGTYTLDTKLPNRYYSELLVGEKN
Ga0137391_1157479013300011270Vadose Zone SoilMRTRLPIALIVLALAARAYPARAQEQPEKIVDQFVKAAGGAKALSRIQTLTLEGTFTSEDGKTGTYTLDTKLPNRYYSELLASDKNLIEAYNGKS
Ga0137393_1014158813300011271Vadose Zone SoilMRTRLFTTLLALMLTDGAYPARAQEAEKIVDQYVKAAGGARALAKIQTLTLEGAFTGDDGKTGTYTLDTKLPNRYYSELLVGENNLIE
Ga0137393_1072348523300011271Vadose Zone SoilMRTRLFTTLLALMLTDVAYPARAQEAEKIVDQYVKAAGGARALAKIQTLTLEGTFRADDGKTGTYTLDTKLPNRYYSELLVGEK
Ga0137393_1092249213300011271Vadose Zone SoilMRTRLFLVLIVLILTSGALPTHGQEPGKIVDQYVKAAGGGKALAKIQTLTLEGMFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLI
Ga0137463_112563613300011444SoilMRTPFRLIVIALTLTAGVCPARAQEAEKTVSQYVKAAGGSKALGKIQTLTLEGTFTNGDGKAGTYTLDTKLPNRFYSELLVGEKNLIE
Ga0137364_1116132213300012198Vadose Zone SoilMRTRLLIALIVLILTAGVHPARAQEEPGKIVEQCVKASGGSKALGRIQTLTLEGTFTSDDGKTGTYTLDTKLPNRYYSELLTGDKNLIEA
Ga0137382_1000301863300012200Vadose Zone SoilMRARLLTILIALMITSGAYPAHAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWHQNAAGDLG
Ga0137382_1101672413300012200Vadose Zone SoilMRTRLLVAFIVVALTAQMRPVRAQEEPGKIVEQYVRAAGGSKALGRIQTLIIEGAFLEDGKAGTYTLDTKLPNRYYSE
Ga0137363_1072090523300012202Vadose Zone SoilMRTSFRIILTALILTGMACPAPAQEAGKIVEQYVKAAGGSKALSKIQTFTLEGTFASGEGKAGTYTLDTKLPNRYYMELLVNEKSWIE
Ga0137363_1122152423300012202Vadose Zone SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKSAW
Ga0137363_1126183323300012202Vadose Zone SoilMRTPFRIILIALILTGTAYPAPAQEVGKIVEQYVKAVGGSKALSKIQTLTLEGTFTGGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNG
Ga0137363_1160539223300012202Vadose Zone SoilMIPMRTRLFTILIASVLTTGVLPVHAQEAGKIVDQYVKAAGGGKALARIQTLTIEGTFTGDDGKSGTYTLDTKLPNRYYSELLVGEKNLI
Ga0137399_1070690213300012203Vadose Zone SoilMRTRLLSILIALILTRGAYPARAQDAGKIVEQYVKAAGGARVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELMAG
Ga0137362_1120923823300012205Vadose Zone SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKSAWH
Ga0137362_1120945723300012205Vadose Zone SoilMRTPFRIILIALILTGTAYPAPAQEVGKIVEQYVKAVGGSKALSKIQTLTLEGTFTGGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKSAWH
Ga0137381_1003131313300012207Vadose Zone SoilMRTRLFIAFNALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSELLVGEMNL
Ga0137381_1108201523300012207Vadose Zone SoilMRTRLFIAPIALLLTAGIYPARAQEEPGKIVDQYVKATGGGRALAKIQTLTLEGNFTSDDGTTGTYTLDTKLPNRYYSELLVGEKNLIEA
Ga0137376_1148759113300012208Vadose Zone SoilMRARLLTILIALMLTGGAYPARAQEAGKIVEQYVKAAGGGRALAKIHTLTVEGSLASDDGKTGTYTLDTKLPNRYYSELLIGEKNLIEAYN
Ga0137379_1013140513300012209Vadose Zone SoilMRTRSFTTLIAWILVGAVSPARSQEAGKIVEQYVKAAGGSRALAKVQTLTLEGTFMTDDGKSGTYTLDTKLQNRYYSELLIGERNVIEAYNGKS
Ga0137386_1112168323300012351Vadose Zone SoilMRTRPFITLIALLLTAGSYPARAQEEPGKVVDQYVQAAGGGRALAKIQTLTLEGNFTSDDGTTGTYTLDTKLP
Ga0137385_1009083413300012359Vadose Zone SoilMRTRSFTTLIAWILVGAVSPARSQEAGKIVEQYVKAAGGSRALAKVQTLTLEGMFTTDDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSSWHQNSAGELGTLVGPEGMQLEAAAQYYNSRLLNLKKSKMT
Ga0137385_1087012313300012359Vadose Zone SoilMRTRPFITLIALLLTAGSYPARAQEEPGKVVDQYVQAAGGGRALAKIQTLTLEGNFTSDDGTTGTYTLDTRLPNRYYSELLVGEKNLIEAYNGKSAWHENGAGELGTLV
Ga0137385_1107310813300012359Vadose Zone SoilMRTRLFIAFNALLLTGGAYPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSELL
Ga0137361_1136255623300012362Vadose Zone SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKSA
Ga0137390_1093572813300012363Vadose Zone SoilMIPMRTRLLTILIASVLTTEVLPVHAQEAGKIVVQYVKAAGGGKALARVQTLTLEGTFTTDGGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWHQSAA
Ga0137358_1008529833300012582Vadose Zone SoilMRTRLFTILIALMLTGGAYPARAQEAGKIVEQYVKAAGGGRALAKIQTMTLEGSFTSDDGKMGTYTLDTKLPNRYYSELLIGEKNLIEA
Ga0137358_1029470813300012582Vadose Zone SoilMRTPFRIILIALILTGMACPAPAQEAGKIVEQYVKAAGGSKALSKIQTLTLEGAFTSSDGKAGTYTLDTKLPNRYYMELL
Ga0137358_1059836823300012582Vadose Zone SoilMRAGLLTILILLMLTGGAYPAGAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFASDDGKTGTYTLDTKLPNRYYSELLIGEKNLIEA
Ga0137358_1066858123300012582Vadose Zone SoilMRTPVLIALMVSTLTAGSYPARAQEEPGKIVEQYVKAAGGGKALSRIQALTLEGTFASDNGKTGTYTLDTKLPNRYYSELLAGDKNVIEAYN
Ga0137398_1014403223300012683Vadose Zone SoilMIPMRTRLLTILIASVLTTEVLPVHAQEAGKIVDQYVKAAGGGKALARIQTLTLEGTFTTDDGKSGTYTLDTKLPNRYYSELLVGEKNLIE
Ga0137397_1060596623300012685Vadose Zone SoilMRTPFRIILFALMLNGTACPAPAQDPGKIVGQYVKAAGGSKALGKIRTLTLEGVFTNGDGKPGTYTFDTKLPNRYYSELLVGDKNLIEAYNGKSAWHQNAAG
Ga0137397_1075418223300012685Vadose Zone SoilMRTPFRLILIALILTGMACPAPAQEAGKIVEQYVKAAGGSKALSRIQTLTLEGTFTSGDGKAETYTLDTKLPNRYYMELLVNEKSWIEAYNGK
Ga0137397_1102830823300012685Vadose Zone SoilMLTGGAYPARAQDAGKIVEQYVKAAGGARLLAKIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELMAGEKNVI
Ga0137395_1014946023300012917Vadose Zone SoilMRAGLLTILILLMLTGGPYPARAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFASDDGKTGTYTLDTKLPNRYYSQLLIGEKNLIEAYN
Ga0137419_1175294013300012925Vadose Zone SoilMRTPVLIALMVSTLTAGSYPARAQEEPGKIVEQYVKAAGGGKALSRIQALTLEGTFARANGKTGTYTLDTKLPNRYYSELLAGDKNLIEAYNGKSA
Ga0137416_1006983823300012927Vadose Zone SoilMRTPFRVILIALILTGMACPAPAQEVGKIVEQYVKAAGGSKALSKIQTLTLEGTFTSGEGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKS
Ga0137416_1024270313300012927Vadose Zone SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMEL
Ga0137416_1080538013300012927Vadose Zone SoilMRTRLLSILIALILTRGAYPARAQDAGKIVEQYVKAAGGARVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSEL
Ga0137416_1147978323300012927Vadose Zone SoilMILMRVRLFTILIALTFTGGANPAAAQEAAKIVDQYVKAAGGGRALAKIQTLTLEGTFTSDDGKSGTYTLDTKLPNRYYSELMAGEKN
Ga0137404_1178809923300012929Vadose Zone SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAY
Ga0137410_1081514723300012944Vadose Zone SoilMRTPFRIILFALMLNGTACPAPAQDPGKIVGQYVKAAGGSKALGKIRTLTLEGVFTNGDGKPGTYTFDTKLPNRYYSELLVGDKN
Ga0137410_1143538523300012944Vadose Zone SoilMRTSFRIILIGLIMPGMACPAPAQEAGKIVEQYVKAAGGSKALSKIQTLTLEGTFASGDGKVGTYTLDTKLPNRYYSELLLGEKNLIEAYNGKS
Ga0134076_1010455023300012976Grasslands SoilMRTRLLIALIVLILAAGMRPARAQEEPGKIVEQYVKAAGGSKALGRIQTLILEGAFTSDDGKTGTYTLDTKLPNRYYSELL
Ga0134078_1036191523300014157Grasslands SoilMRARLLTILIALMITSGAYPAHAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWHQN
Ga0137411_103131613300015052Vadose Zone SoilMRARLFTTLIALMLTGGAYPARAQEAGKIVDQYVKAAGGARALAKIQTLTLEGSFTSDDGKMGTYTLDTKLPNRIATTRN
Ga0137405_112785813300015053Vadose Zone SoilMRTPFRIILFALMLNGTACPAPAQDPGKVVGQYVKAAGGSKALGKIRTLTLEGVFTNGDGKAGTYTFDTKLPNRYLLGIAG
Ga0137420_134742613300015054Vadose Zone SoilMLTGEAHTARAQDAGKIVEQYLKAAGGTRVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRFYSELMAGEKNLIEGRTTGSRPGIR
Ga0066667_1005534913300018433Grasslands SoilMRTRLFIAFIACLLTGGADPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPN
Ga0066667_1160269423300018433Grasslands SoilMRTRLSIALIALILTAGMHPARAQEEPGKIIDQYVKAAGGGKALSRIQTLSIDGTFTSDDGKTGTCTLDTKLPNR
Ga0066669_1219854623300018482Grasslands SoilMRARLLTILMALMLTGGACPARAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSLASDDGKTGTYTLDTKLPNR
Ga0179594_1026834413300020170Vadose Zone SoilMRTRLLSILIALMLTGGAYPAPAQDAGKIVEQYVKAAGGTRVLARIQTLTLEGTFTSDDGKTGTYTLDTKLPNRYYSELLVGEKNL
Ga0179592_1020673013300020199Vadose Zone SoilMRTRLLSILIALILTRGAYPACAQDAGKIVEQYVKAAGGAKVLAKIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWHQNAAGELG
Ga0210403_1001220153300020580SoilMLTGGAYRARAQEAGKIVEQYVKAAGGGRALAKIQTLTLEGSFTSDDGKLGTYTVDSKLPNRHYSELLVGEKNLIEA
Ga0210399_1071808123300020581SoilMRARLPIALLAFTLAAGAHSARAQEAEKIVSQYVKAAGGSKALGKIQTLTLEGTFSYGDGKTGTYTLDTRLPNRYYSELLV
Ga0210404_1040346513300021088SoilMRTRLLSILIALMLTGGAYPAGAQDAGKIVEQYVKAAGGGRALAKIQTLTIEGTFTSDDGKTGTYTLDTKLPN
Ga0210400_1104383713300021170SoilMRTRLLSILIALTLTGWAYPAPAQDAGKIVEQYVKVMGGTRGLARIQTLTLEGTFTSDDGKMGAYTLDTKLPNRYYSELMAGEKNLIEAYNGKSAWHQNAAGELG
Ga0210391_1144266513300021433SoilMRARLPIAFLALTLTAGACPVRAQEAEKIVSQYVKAAGGSKTLSKIQTLTLEGTFTSTDGKAGTYTFDTKLPNRYYLELLVGERNLIEAYNGKS
Ga0210410_1079694123300021479SoilMRTRLLSILIALTLTGGAHTARAQDAGKIVEQYVKAAGGGKALGKIQTLAIEGTFTTDDGKSGTYTFDTKLPNRYYSE
Ga0137417_122861323300024330Vadose Zone SoilMRTRLPSVLIALMLTGEAHTARAQDAGKIVEQYLKAAGGTRVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRFYSELMAGEKNLIEAYNGKS
Ga0207665_1084608313300025939Corn, Switchgrass And Miscanthus RhizosphereMRTRLFIAFIACLLSGGAYPARAQEAGRIVDEYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPN
Ga0209438_112117213300026285Grasslands SoilMRTRLPSVLIALMLTGEAHTARAQDAGKIVEQYLKAAGGTRVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRFYSELMA
Ga0209237_128134523300026297Grasslands SoilMILMRTRLFIILIALTLTGHPARAQEAGKIVEQYVKAAGGKALARIQTLTIEGTFAGDDRKSGTYTLDTKLPNRYYSELLVGKKNV
Ga0209240_105012613300026304Grasslands SoilMRTRLPSVLIALMLTGEAHTARAQDAGKIVEQYLKAAGGTRVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRFYSELMAGEKNLIEAYNGKSAWHQNAAGE
Ga0209055_112781623300026309SoilMRTRLSIALIALILTVGMRPARAQEEPGKIIDQYVKAAGGGKALSRIQTLSIEGTFASDDRKTGTYTLDTKLPNRYYSELLVGDRNLIEAYNGKSAWHQKAD
Ga0209154_109416313300026317SoilMALLLTDVAHPARAQEVGKIVDQYVKAVGGGRALAKIHTLALEGTFTSVDGKSGTYTLDTKLPNRYYLELLVGEKN
Ga0209154_122728813300026317SoilMRTRLLVGLIVLILAAGMHPARAQEEPGKIIDQYVKAAGGDKTLSRIQTLSIEGTFTSDDGKTGTYTLDTKLP
Ga0209471_129302313300026318SoilMCTRLFIALIALIFTVGMHPARAQEEPKKIVEQYVKAAGGSKALGRIQTVTLEGTFTSDDGKTGTYTLDTKLPNRYYSELLAGDKNLIEAYNG
Ga0209377_106691213300026334SoilMILMRTRLFIILIALTLTGHPARAQEAGKIVEQYVKAAGGGKALARIQTLTIEGTFAGDDGKSGTYTLDTKLPNRYYSELLVGKKNVIEAYN
Ga0209057_100504913300026342SoilMRTRLFIAFIACLLTGGADPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNR
Ga0209806_130858513300026529SoilMRTPFRIILIALILTGTACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYN
Ga0209807_108709113300026530SoilMRTRLFIAFIACLLTGGAHPARAQEAGRIVEQYVKAAGGGRALAKIQTLTLEGTFTSVDGKSGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAW
Ga0209474_1002075113300026550SoilMRTRLLVAFIVVTLTAQMRPVRAQEEPGKIVEQYVRAAGGSKALGRIQTLIIEGAFLSEDGKAGTYTLDTKLPNRYYSELLLGEKNLIEAYNGK
Ga0179587_1036379013300026557Vadose Zone SoilMRTRLLSILIALILTRGAYPACAQDAGKIVEQYVKAAGGAKVLAKIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELLVGD
Ga0179587_1050531513300026557Vadose Zone SoilMRTRPLIALIVLILTAGAYPARAQEEPGKIVDQYVKATGGSKALGRVQTLTLEGAFTSDDGKMGTYTLDTKLPNRYYSELLAGDK
Ga0209076_102171813300027643Vadose Zone SoilMRTRLPIALIVLILSAGAHPAGAQDDARKVVDQYVKAAGGAKALSRIQTLTLEGTFTSEDGKTGTYTLDTKLPNRYYSELLAGEKNLIEAYNGKS
Ga0209588_126676113300027671Vadose Zone SoilMRNFLRGIAFLHLSPMRTLFRIILIALILTGMACPARAQEAGKIVAQYVKAAGGSKALSKIQTLTLEGTFTSGESKAGTYTLDTKLPNRYYMELLVNEKSWIEAYNGKSAWHQTAGGEL
Ga0209118_117977213300027674Forest SoilMRTRLLSTLIALMLTCGVYPARAQDAGKIVEQYVKAEGGTRVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELMVGEKNLIEAYNGKSAWHQNAAGELGTLV
Ga0209011_120687323300027678Forest SoilMRTRLLSILIALILTGGTHTARAQDAGKIVEQYVKAAGGARVLARIQTLTLEGTFTSDDGKMGTYTLDTKLPNRYYSELLI
Ga0209626_104189223300027684Forest SoilLRRIAFLYLNAMRTRLFTIVIALMLTGGAPPARAQEAAKIVEQYVKAAGGGKALAKIQTLTLEGSFTSDDGKLGTYTLDTKLPNRYYSELL
Ga0209488_1116970513300027903Vadose Zone SoilMRTRLFTILIALMLTGGAYPARAQEAGKIVEQYVKAAGGGRALAKIQTMTLEGSFTSDDGKMGTYTLDTKLPNRYYSELLIGEKNLIEAY
Ga0137415_1042208823300028536Vadose Zone SoilMILMRVRLFTILIALTFTGGANPAAAQEAAKIVDQYVKAAGGGRALAKIQTLTLEGTFTSDDGKSGTYTLDTKLPNRYYSELLVGEKILIEA
Ga0137415_1115149913300028536Vadose Zone SoilMRTSFRIILTALILTGMACPAPAQEAGKIVEQYVKAAGGSKALSKIQTFTLEGTFASGDGKAGTYTLDTKLPNRYYMELLVNEKSWIEAYN
Ga0222749_1078839413300029636SoilLRRIAFLYLNAMRTRLFTILIALMLTGGAHPARAQEAGKIVDQYVKAAGGGRALAKIQTLTLEGSFTSDDGKLGTYTLDTKLPNRYYSELLVGEKNLIEAYNGKSAWHQNA
Ga0310686_10353948123300031708SoilMHVRLPIPFLALILAAGACPAGAQEAEKTVSQYVKAAGGSKALGKIQTLTLEGTFTSGDGKAGTYTLDTKLPNRYYSELLVGEKNLIEAY
Ga0307476_1056111323300031715Hardwood Forest SoilMILMRTPVFATLLALFLAGEAYSARAQEPAKIVDQYVKAAGGGRVLGRIQTLTLEGTFTTDEGKAGTYTLDTKLPNRYYSEL
Ga0307475_1145320923300031754Hardwood Forest SoilMRARLPLVFLALTLTAAACPIQAQEADKIVSQYVKAAGGSKALGKIQTLTLEGTFTGADGKAGTFTFDTKLPNRYYLEFLVG
Ga0307478_1178764713300031823Hardwood Forest SoilMRTVSHFNFPRNNLRWIASIQLNAMRMPLSKTALALFLACGACAAQAQEPAKIVEQYVKAAGGGKALGKIHTLAIEGTFASDDGKTGTYTFDTKLPNRYY
Ga0307472_10065990023300032205Hardwood Forest SoilMRTRLPIALIVLALAARAYPARAQEQPGKVIDQYVKAAGGAKALSRIQTMTLEGTFTSDDGKTGTYTLDTKLPNRYYSELLAGEKI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.