Metagenome Family F078776

Basic Information
Family ID	F078776
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	45 residues
Representative Sequence	MRLSLWPQSLFGRLLAASVAAVLLAQAVALLLIAREREHFVLQG
Number of Associated Samples	105
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.24 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (59.483 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.586 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.103 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00486	Trans_reg_C	82.76
PF06175	MiaE	12.93
PF00069	Pkinase	1.72
PF12850	Metallophos_2	0.86
PF13660	DUF4147	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4445	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE (synthesis of 2-methylthio-cis-ribozeatin)	Translation, ribosomal structure and biogenesis [J]	25.86
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.90 %
Unclassified	root	N/A	40.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	44.83 %
Unclassified	root	N/A	40.52 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	13.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	13.79 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	13.79 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Steroidobacter gossypii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	13.79 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Steroidobacter gossypii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	13.79 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0844768	Not Available	576	Open in IMG/M
3300001546\|JGI12659J15293_10027068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1441	Open in IMG/M
3300002911\|JGI25390J43892_10024232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1463	Open in IMG/M
3300004091\|Ga0062387_100825011	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300004633\|Ga0066395_10679869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	609	Open in IMG/M
3300005176\|Ga0066679_10844321	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300005337\|Ga0070682_100185035	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005436\|Ga0070713_100261140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1583	Open in IMG/M
3300005437\|Ga0070710_10537872	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300005447\|Ga0066689_10216744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1167	Open in IMG/M
3300005538\|Ga0070731_10899255	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005538\|Ga0070731_11022723	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300005541\|Ga0070733_11224079	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005544\|Ga0070686_100451534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	988	Open in IMG/M
3300005547\|Ga0070693_101313307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	559	Open in IMG/M
3300005554\|Ga0066661_10801057	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300005712\|Ga0070764_10422901	Not Available	790	Open in IMG/M
3300005712\|Ga0070764_10739587	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300006050\|Ga0075028_100272982	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300006059\|Ga0075017_101320316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	566	Open in IMG/M
3300006358\|Ga0068871_100607759	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300006800\|Ga0066660_10431194	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300007258\|Ga0099793_10237801	Not Available	878	Open in IMG/M
3300009545\|Ga0105237_11818058	Not Available	617	Open in IMG/M
3300010048\|Ga0126373_10665218	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300010048\|Ga0126373_11134128	Not Available	848	Open in IMG/M
3300010048\|Ga0126373_12350456	Not Available	593	Open in IMG/M
3300010049\|Ga0123356_10140877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2378	Open in IMG/M
3300010358\|Ga0126370_10273982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1323	Open in IMG/M
3300010359\|Ga0126376_12683561	Not Available	547	Open in IMG/M
3300010361\|Ga0126378_11345219	Not Available	808	Open in IMG/M
3300010376\|Ga0126381_100031127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6362	Open in IMG/M
3300010376\|Ga0126381_104690500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	526	Open in IMG/M
3300010401\|Ga0134121_10030580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4363	Open in IMG/M
3300012359\|Ga0137385_10239242	Not Available	1575	Open in IMG/M
3300012683\|Ga0137398_10862159	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	632	Open in IMG/M
3300012922\|Ga0137394_10400586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1170	Open in IMG/M
3300012923\|Ga0137359_10486620	Not Available	1090	Open in IMG/M
3300012925\|Ga0137419_11297603	Not Available	612	Open in IMG/M
3300012948\|Ga0126375_11793404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	535	Open in IMG/M
3300012951\|Ga0164300_11037962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	530	Open in IMG/M
3300012971\|Ga0126369_12508326	Not Available	601	Open in IMG/M
3300012984\|Ga0164309_10334729	Not Available	1105	Open in IMG/M
3300013306\|Ga0163162_10443991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1429	Open in IMG/M
3300015356\|Ga0134073_10069750	Not Available	983	Open in IMG/M
3300016319\|Ga0182033_10582450	Not Available	970	Open in IMG/M
3300016357\|Ga0182032_10109650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1968	Open in IMG/M
3300017936\|Ga0187821_10410591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	556	Open in IMG/M
3300020579\|Ga0210407_10687133	Not Available	794	Open in IMG/M
3300020582\|Ga0210395_11130982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	577	Open in IMG/M
3300020583\|Ga0210401_10342946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1355	Open in IMG/M
3300021171\|Ga0210405_10967873	Not Available	643	Open in IMG/M
3300021433\|Ga0210391_10460007	Not Available	999	Open in IMG/M
3300021439\|Ga0213879_10132452	Not Available	715	Open in IMG/M
3300021444\|Ga0213878_10119137	Not Available	1081	Open in IMG/M
3300021478\|Ga0210402_11743486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	549	Open in IMG/M
3300021560\|Ga0126371_11503565	Not Available	802	Open in IMG/M
3300024290\|Ga0247667_1106951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	515	Open in IMG/M
3300024323\|Ga0247666_1108305	Not Available	552	Open in IMG/M
3300025900\|Ga0207710_10156872	Not Available	1107	Open in IMG/M
3300025900\|Ga0207710_10496143	Not Available	633	Open in IMG/M
3300025906\|Ga0207699_10201309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1349	Open in IMG/M
3300025911\|Ga0207654_10044006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2533	Open in IMG/M
3300025924\|Ga0207694_11777424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	518	Open in IMG/M
3300025929\|Ga0207664_11929345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	513	Open in IMG/M
3300025941\|Ga0207711_10107451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2477	Open in IMG/M
3300025949\|Ga0207667_11668062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300026035\|Ga0207703_10440653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1215	Open in IMG/M
3300026078\|Ga0207702_12284315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	529	Open in IMG/M
3300026301\|Ga0209238_1060275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1348	Open in IMG/M
3300026305\|Ga0209688_1031019	Not Available	1028	Open in IMG/M
3300026310\|Ga0209239_1146357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	945	Open in IMG/M
3300026328\|Ga0209802_1194256	Not Available	790	Open in IMG/M
3300026329\|Ga0209375_1016636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4331	Open in IMG/M
3300026909\|Ga0207858_1022376	Not Available	604	Open in IMG/M
3300027565\|Ga0209219_1018352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1697	Open in IMG/M
3300027674\|Ga0209118_1222751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	503	Open in IMG/M
3300027681\|Ga0208991_1058151	Not Available	1167	Open in IMG/M
3300027748\|Ga0209689_1047503	All Organisms → cellular organisms → Bacteria → Proteobacteria	2426	Open in IMG/M
3300028047\|Ga0209526_10709124	Not Available	633	Open in IMG/M
3300029951\|Ga0311371_10025281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10835	Open in IMG/M
3300031231\|Ga0170824_115081975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	520	Open in IMG/M
3300031446\|Ga0170820_10899747	Not Available	650	Open in IMG/M
3300031543\|Ga0318516_10153340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1324	Open in IMG/M
3300031679\|Ga0318561_10728327	Not Available	545	Open in IMG/M
3300031682\|Ga0318560_10367549	Not Available	777	Open in IMG/M
3300031720\|Ga0307469_10132924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1826	Open in IMG/M
3300031753\|Ga0307477_10251900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1223	Open in IMG/M
3300031753\|Ga0307477_11162641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	502	Open in IMG/M
3300031754\|Ga0307475_10441780	Not Available	1045	Open in IMG/M
3300031765\|Ga0318554_10251026	Not Available	1007	Open in IMG/M
3300031768\|Ga0318509_10146374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1301	Open in IMG/M
3300031769\|Ga0318526_10009913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3042	Open in IMG/M
3300031777\|Ga0318543_10456800	Not Available	572	Open in IMG/M
3300031778\|Ga0318498_10376088	Not Available	633	Open in IMG/M
3300031781\|Ga0318547_10053602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2180	Open in IMG/M
3300031795\|Ga0318557_10593571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	508	Open in IMG/M
3300031798\|Ga0318523_10474304	Not Available	620	Open in IMG/M
3300031798\|Ga0318523_10506520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	597	Open in IMG/M
3300031805\|Ga0318497_10011428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4118	Open in IMG/M
3300031805\|Ga0318497_10823215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	521	Open in IMG/M
3300031823\|Ga0307478_11296770	Not Available	605	Open in IMG/M
3300031859\|Ga0318527_10302335	Not Available	681	Open in IMG/M
3300031880\|Ga0318544_10432615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	512	Open in IMG/M
3300031897\|Ga0318520_10073699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1858	Open in IMG/M
3300031962\|Ga0307479_10538781	Not Available	1150	Open in IMG/M
3300031962\|Ga0307479_12101853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter gossypii	512	Open in IMG/M
3300032039\|Ga0318559_10003215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5213	Open in IMG/M
3300032043\|Ga0318556_10244161	Not Available	937	Open in IMG/M
3300032060\|Ga0318505_10385517	Not Available	662	Open in IMG/M
3300032066\|Ga0318514_10022622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2875	Open in IMG/M
3300032066\|Ga0318514_10367957	Not Available	762	Open in IMG/M
3300032174\|Ga0307470_11267422	Not Available	602	Open in IMG/M
3300032205\|Ga0307472_100673706	Not Available	926	Open in IMG/M
3300033289\|Ga0310914_11450450	Not Available	589	Open in IMG/M
3300033290\|Ga0318519_10619876	Not Available	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.66%
Host-Associated	Host-Associated	10.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.21%
Plants	Host-Associated → Plants	9.48%
Aquatic	Environmental → Aquatic	3.45%
Arthropoda	Host-Associated → Arthropoda	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Sediment	Environmental → Aquatic → Sediment	1.72%
Peat	Environmental → Terrestrial → Peat	0.86%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.55%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.86%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.86%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08447681	2228664022	Soil	MSFSPWPQSLFGRLLAASVAAVLIAQAVALLLIAQE
JGI12659J15293_100270683	3300001546	Forest Soil	MRLSLWPQSLFGRLLAASVAAALIAQATALVLIAQERERFVLQGSVR
JGI25390J43892_100242323	3300002911	Grasslands Soil	MRLSAWPQSLFGRLLAASVAAVLVAQAAGLLLIAQERERFVLQGS
Ga0062387_1008250112	3300004091	Bog Forest Soil	MRLSLWPQSLFGRLIAASVIAVLVAQAVGLVLIAQEREGFVLQGSV
Ga0066395_106798692	3300004633	Tropical Forest Soil	MSFSPWPQSLFGRLLAASVAAVLAAQVVALLLIAQEREHFMLQGSVREW
Ga0066679_108443211	3300005176	Soil	MRLSAWPQSLFGRLLAASVVAVLLAQTAGLFLIAQEREHFVLQGSVREWARRI
Ga0070682_1001850351	3300005337	Corn Rhizosphere	MSPRLWPQSLFGRLIAASIIALLLAQVVSLVMIARERERFILQGSVYEWSRR
Ga0070713_1002611401	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSFSPWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREWT
Ga0070710_105378721	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRLSLWPQSLFGRLLAASVAAVLFAQAVALLLIAQEREHFMLQGSV
Ga0066689_102167443	3300005447	Soil	MRAMRVSLWPQSLFGRLIAASALAVLLAHVAGLFLIAQEREHFVLQGSV
Ga0070731_108992552	3300005538	Surface Soil	MRWWPQSLFARLLAASVGAVLLAQAAALILIVQERERFVLQGSLSEW
Ga0070731_110227232	3300005538	Surface Soil	MRLTLWPQSLFGRLLAASVGAVLLAQAAGLVLIAQ
Ga0070733_112240792	3300005541	Surface Soil	MRRVALWPQSLFGQLLAASVIAVLLAQAVALFLIAQEREHFILQGSVREWTRR
Ga0070686_1004515342	3300005544	Switchgrass Rhizosphere	MRVSLWPQSLFGRLFAASIVALLLAQLVSLVFVARERERFILQ
Ga0070693_1013133071	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSLRLWPQSLFGRLIAASIIALLLAQVVSLVMIARERERFILQGSV
Ga0066661_108010572	3300005554	Soil	MQLSVWPQSLFGRLIAASALAVLLAHATGLLLIAQEREHFVLQGSVREWSR
Ga0070764_104229012	3300005712	Soil	MAEKLRWQLRLWPQSLFGRLLMASVIAVLLAQAVALFLIAQER
Ga0070764_107395871	3300005712	Soil	MRWSLWPQSLFGRLLAASVGAVLLAQAIAFVLIAQERERFVLEGSVR
Ga0075028_1002729821	3300006050	Watersheds	MRISLWPQSLFGRLLAASVLAVLIAQAAALFLIAQDRERFALQASVHEWTHRIS
Ga0075017_1013203161	3300006059	Watersheds	MRWSPWPQSLFGRLLAATVAAVLVAQAASVLLIAQEHERFMLQGSVHDWA
Ga0068871_1006077592	3300006358	Miscanthus Rhizosphere	MSPRLWPQSLFGRLIAASIIALLLAQIVSLVMIARERERFILQG
Ga0066660_104311941	3300006800	Soil	MQLSVWPQSLFGRLIAASALAVLLAHATGLLLIAQEREHFVLQGSVREWSRRIAE
Ga0099793_102378012	3300007258	Vadose Zone Soil	MRLSPWPQSLFGRLLAASVAAVLLAQTAGLFLIAQEREHFVLQGSVRE
Ga0105237_118180582	3300009545	Corn Rhizosphere	VSRFPLWPQSLFGRLVAASVLAVLLAQMVGLLLIAHERERF
Ga0126373_106652181	3300010048	Tropical Forest Soil	MKSLTPWPQSLFGRLLAASVIAVLLAQAVALLLIAREREHFVLQGSVREWTRRIT
Ga0126373_111341281	3300010048	Tropical Forest Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERFVMQ
Ga0126373_123504562	3300010048	Tropical Forest Soil	MRLSLWPQSLFWRLLAASVGAVLLAHAVALLLIAQERERFVLQGSVREWTRHI
Ga0123356_101408771	3300010049	Termite Gut	MRLSLWPQSLFGRLLAASVAAVLLAHATALLLIAQERER
Ga0126370_102739823	3300010358	Tropical Forest Soil	MSFSPWPQSLFGRLLAASVAAVLVAQVVALLLIAQEREHFMLQGSVREWTRRI
Ga0126376_126835611	3300010359	Tropical Forest Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERER
Ga0126378_113452192	3300010361	Tropical Forest Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQER
Ga0126381_1000311278	3300010376	Tropical Forest Soil	MRLSLWPQSLFGRLLAASIAAVLLAHLSSLLLIAQERERFVLQG
Ga0126381_1046905002	3300010376	Tropical Forest Soil	MRLSLWPQSLFWRLLAASVGAVLLAHAVALLLIAQERERFVLQGSVREWTRHIA
Ga0134121_100305807	3300010401	Terrestrial Soil	MRLSLWPQSLFGRLLAASVAAVLFAQAVALLLIAQEREHFMLQ
Ga0137385_102392423	3300012359	Vadose Zone Soil	MRLSLWPQSLFGRLIAASIVALLLAQLASLVFIARERERFILQGSVREWS
Ga0137398_108621591	3300012683	Vadose Zone Soil	MRLPLWPQSLFGRLLAATVCAVVLAEVAALFLIAQEH
Ga0137394_104005861	3300012922	Vadose Zone Soil	MQLSAWPQSLFGRLIAASALAVLLAHAAGLFLIAEERERFVLQGS
Ga0137359_104866203	3300012923	Vadose Zone Soil	MRLSLWPQSLFGRLFAASIVALLLAQLVSLVFVARERERFILQ
Ga0137419_112976032	3300012925	Vadose Zone Soil	MRLSLWPQSLFGRLLAASVAAVLLAQTAGLFLIAQE
Ga0126375_117934042	3300012948	Tropical Forest Soil	MRLPLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQG
Ga0164300_110379622	3300012951	Soil	MSFSPWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFIRAEVRPGG*
Ga0126369_125083262	3300012971	Tropical Forest Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERFVMQGS
Ga0164309_103347293	3300012984	Soil	MSFSPWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSV
Ga0163162_104439911	3300013306	Switchgrass Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQEREHFVLQG
Ga0134073_100697501	3300015356	Grasslands Soil	MRLSPWPQSLFGRLLAASVAAVLLAQAAGLFLIAQERERFVLQGSVREWARR
Ga0182033_105824501	3300016319	Soil	MSFSLRPQSLFGRLRAASVAAVLIAQAVALLLIAQEREHFML
Ga0182032_101096504	3300016357	Soil	MRLTLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREWARR
Ga0187821_104105911	3300017936	Freshwater Sediment	MRLSLWPQSLFGRLLAASVAAVLFAQAVALLLIAQEREHFMMQGSVREWS
Ga0210407_106871331	3300020579	Soil	MRLSVWPRSLFGRLLAASVAAVLLAQAVGLFLIAQEREGFVLLGSVREWSRRI
Ga0210395_111309821	3300020582	Soil	MTRLTLWPQSLFGRLLAASVGAVLLAQVAGLVLIAQERERFVMQGSV
Ga0210401_103429461	3300020583	Soil	MLLSPWPQSLFGRLLAASVAAVLIAQAVALLLIAQERDR
Ga0210405_109678731	3300021171	Soil	MRLSLWPQSLFGRLLAATVAAVLVAQATGLLLIAQERERFVLQGSVREWT
Ga0210391_104600072	3300021433	Soil	MTRLTLWPQSLFGRLLAASVGAVLLAQVAGLVLIAQERERFVMQGSVR
Ga0213879_101324521	3300021439	Bulk Soil	MRVPFWPQTLFWRLLAASVAAVLVAQAVALLLIAQ
Ga0213878_101191372	3300021444	Bulk Soil	MRLRLWPQSLFWRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREWTR
Ga0210402_117434862	3300021478	Soil	MRRLAPWPQSLFGQLLAASVIAVLLAQAVALFLIAQE
Ga0126371_115035652	3300021560	Tropical Forest Soil	MRLPLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVRECTRRIAD
Ga0247667_11069511	3300024290	Soil	MRATLWPQSLFGRLVAASVIAVFVAQAAALLLIAREREHFVLQS
Ga0247666_11083052	3300024323	Soil	MSFSPWPQSLFGRLLAATVAAVLIAQAVALLLIAQEREHFMLQGSVREWT
Ga0207710_101568723	3300025900	Switchgrass Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQER
Ga0207710_104961432	3300025900	Switchgrass Rhizosphere	MSSRLWPQSLFGRLIAASIIALLLAQVVSLVMIARERERFILLGSVF
Ga0207699_102013091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQEREHFVLQ
Ga0207654_100440064	3300025911	Corn Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQEREHFV
Ga0207694_117774241	3300025924	Corn Rhizosphere	MTFRLWPQSLFGRLMAASIVALLLAQVVSLVMIARERERYILQGSVREW
Ga0207664_119293452	3300025929	Agricultural Soil	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQEREHFVL
Ga0207711_101074514	3300025941	Switchgrass Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQAVGLFLIAQEREHFV
Ga0207667_116680623	3300025949	Corn Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQEREHF
Ga0207703_104406531	3300026035	Switchgrass Rhizosphere	MRLPLWPQSLFGRLLAASVIAVLLAQTVGLFLIAQERE
Ga0207702_122843152	3300026078	Corn Rhizosphere	MRWSLWPQSLFGRLIAASVLALLLAQVVSLVLIARERERFMLQGSVWE
Ga0209238_10602751	3300026301	Grasslands Soil	MRLSPWPQSLFGRLLAASVAAVLLAHTAGLFLIARER
Ga0209688_10310193	3300026305	Soil	MRLSPWPQSLFGRLLAASVAAVLLAQAAGLFLIAQERE
Ga0209239_11463572	3300026310	Grasslands Soil	MRLSPWPQSLFGRLLAASVAAVLLAHTAGLFLIAQERERFVLQGSVREWARRIAE
Ga0209802_11942562	3300026328	Soil	MRLPLWPQSLFGRLLAATVCAVVLAEVAALFLIAQEHERF
Ga0209375_10166361	3300026329	Soil	MRLSPWPQSLFGRLLAASVAAVLLAHTAGLFLIAQERERFVLQGSVREWAR
Ga0207858_10223761	3300026909	Tropical Forest Soil	MRLSLWPQSLFGRLLAASVAAVLVAQAAALALIAQEREHFVLQVSVRE
Ga0209219_10183523	3300027565	Forest Soil	MRASLWPQSLFGRLLAASVIAVLLAQAAALFLIAQERERFVLQGSVREWTRRIS
Ga0209118_12227511	3300027674	Forest Soil	MMRVSLWPQSLFGRLLAASVAAVLLAQAAGLFLIAQEREGFVLQGS
Ga0208991_10581511	3300027681	Forest Soil	MRLSLWPQSLFGRLIAASILALLLAQLVGMMFVARERERFI
Ga0209689_10475034	3300027748	Soil	MRLSAWPQSLFGRLLAASVAAVLVAQAAGLLLIAQERERFV
Ga0209526_107091241	3300028047	Forest Soil	MSRFFWPQSLFGRLIAASIIALLLAQVVSLVLIAR
Ga0311371_1002528112	3300029951	Palsa	MAESLRSRLTLWPQSLFGRLLMASVIAVLLAQAVALFLIAQEREHFVLQGSV
Ga0170824_1150819752	3300031231	Forest Soil	MRLPLWPQSLFGRLIAASVIAVLVAQAVALVLIAQERERFVLQGSVRVWTRRI
Ga0170820_108997472	3300031446	Forest Soil	MSRYFWPQSLFGRLIAASIIALLLAQVVSLVLIARERERFILPENVRE
Ga0318516_101533401	3300031543	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREWTRR
Ga0318561_107283271	3300031679	Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERF
Ga0318560_103675491	3300031682	Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERFVMQG
Ga0307469_101329244	3300031720	Hardwood Forest Soil	MRLSVWPQSLFGRLLAASVIAVLLAQGAGLLMIAQER
Ga0307477_102519001	3300031753	Hardwood Forest Soil	MRLPLWPQSLFGRLLAATVCAVLLAEGAALFLIAQERERFMQQWSV
Ga0307477_111626411	3300031753	Hardwood Forest Soil	MRLSLWPQSLFGRLVAASVAAVLLAQAVALLLIAQEREHFVRQGSVRDWTRRIAE
Ga0307475_104417801	3300031754	Hardwood Forest Soil	MLLRFWPQSLFGRLLAASVAAVLLAQAVALLLIAQERERFVLQGSVREWTRRISE
Ga0318554_102510262	3300031765	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMV
Ga0318509_101463743	3300031768	Soil	MRLSLWPQSLFGRLLAASVLAVVLAQAVALLLIAQEREHFVRQGSVRD
Ga0318526_100099131	3300031769	Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERE
Ga0318543_104568001	3300031777	Soil	MRLSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREWARRI
Ga0318498_103760882	3300031778	Soil	MRLSLWPQSLFGRLLAASVAAVLLAQAVALLLIAREREHFVLQG
Ga0318547_100536021	3300031781	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQ
Ga0318557_105935711	3300031795	Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERFVLQGSVREWTRRM
Ga0318523_104743042	3300031798	Soil	MRLSLWPQSLFGRLLAASVLAVVLAQAVALLLIAQG
Ga0318523_105065201	3300031798	Soil	MRLTLWPQSLFGRLLAASVAAVLLAQAVALLLIAQEREHFVLQGSVREWTR
Ga0318497_100114286	3300031805	Soil	MRLPLWPQSLFGRLLAASVAAVLLAQAVALVMIAQERERFVLQGSVRE
Ga0318497_108232151	3300031805	Soil	MHLRLWPQSLFWRLLAASVAAVLLAQAVALVMIAQERERFMVQ
Ga0307478_112967701	3300031823	Hardwood Forest Soil	MRLSLWPQSLFGRLLAATVAAVLVAQATGLLLIAQERERF
Ga0318527_103023352	3300031859	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREH
Ga0318544_104326152	3300031880	Soil	MRLSLWPQSLFGRLLAASIAAVVLAHLSSLLLIAQEREHFVL
Ga0318520_100736994	3300031897	Soil	MRLSLWPQSLFGRLLAASVLAVVLAQAVALLLIAQEREHFVRQGSVQ
Ga0307479_105387813	3300031962	Hardwood Forest Soil	MRPSLWPQSLFGRLLAASVGAVLLAQAAGLLLIAQERERFVLQGSVR
Ga0307479_121018531	3300031962	Hardwood Forest Soil	MRLSPWPQSLFGRLLAASVAAVLLAQTAGLFLIAQE
Ga0318559_100032154	3300032039	Soil	MRLSLWPQSLFGRLLAASVLAVVLAQAVALLLIAQEREHFVRQGSVRDWTRRIA
Ga0318556_102441611	3300032043	Soil	MRFSLWPRSLFGRLLAASVVAVLVSQAVALLLIAQEREHFMLQGSVRECTRRIA
Ga0318505_103855172	3300032060	Soil	MLLRLWPQSLFGRLLAASVAAVLLAQAVALVLIAQERERFVLQG
Ga0318514_100226221	3300032066	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQGSVREW
Ga0318514_103679572	3300032066	Soil	MRLRLWPESLFGRLIAVSVIAVLAAQAIGLGLIARERERFVLQGSVREWSRAIR
Ga0307470_112674221	3300032174	Hardwood Forest Soil	MSRFFWPQSLFGRLIAASIIALLLAQVVSLVVIARERERFKLQGS
Ga0307472_1006737062	3300032205	Hardwood Forest Soil	MMRVSLWPQSLFGRLLAASVAAVLLAQAVGLFLIAQEREGFVLQGSVREWSRRI
Ga0310914_114504502	3300033289	Soil	MRLPLWPQSLFGRLLAASVAAVLLAQAVALVMIAQERERF
Ga0318519_106198762	3300033290	Soil	MSFSLWPQSLFGRLLAASVAAVLIAQAVALLLIAQEREHFMLQG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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