NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F078821

Metagenome / Metatranscriptome Family F078821

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078821
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 46 residues
Representative Sequence MIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGK
Number of Associated Samples 88
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 68.70 %
% of genes near scaffold ends (potentially truncated) 98.28 %
% of genes from short scaffolds (< 2000 bps) 93.10 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.966 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(63.793 % of family members)
Environment Ontology (ENVO) Unclassified
(98.276 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.966 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.47%    β-sheet: 0.00%    Coil/Unstructured: 57.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF03031NIF 4.31
PF03420Peptidase_S77 0.86
PF01467CTP_transf_like 0.86
PF00085Thioredoxin 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG5190TFIIF-interacting CTD phosphatase, includes NLI-interacting factorTranscription [K] 4.31


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.97 %
All OrganismsrootAll Organisms31.03 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000142|LPaug09P16500mDRAFT_c1064336Not Available515Open in IMG/M
3300001740|JGI24656J20076_1020555Not Available762Open in IMG/M
3300002484|JGI25129J35166_1014113Not Available1974Open in IMG/M
3300002519|JGI25130J35507_1012864Not Available2056Open in IMG/M
3300003590|JGI26251J51716_1021540Not Available747Open in IMG/M
3300004111|Ga0008651_10207214All Organisms → Viruses → environmental samples → uncultured Mediterranean phage590Open in IMG/M
3300004280|Ga0066606_10137891Not Available905Open in IMG/M
3300005425|Ga0066859_10213469Not Available567Open in IMG/M
3300005508|Ga0066868_10039523All Organisms → Viruses1517Open in IMG/M
3300005520|Ga0066864_10048282All Organisms → Viruses1275Open in IMG/M
3300005521|Ga0066862_10100681Not Available988Open in IMG/M
3300005595|Ga0066833_10022884All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1862Open in IMG/M
3300005605|Ga0066850_10176180Not Available780Open in IMG/M
3300006090|Ga0082015_1077366Not Available518Open in IMG/M
3300006313|Ga0068472_10165310Not Available805Open in IMG/M
3300006326|Ga0068477_1255855Not Available556Open in IMG/M
3300006338|Ga0068482_1111234Not Available1586Open in IMG/M
3300006339|Ga0068481_1260855Not Available1407Open in IMG/M
3300006340|Ga0068503_10817842Not Available636Open in IMG/M
3300006347|Ga0099697_1180328Not Available602Open in IMG/M
3300006736|Ga0098033_1202586Not Available549Open in IMG/M
3300006738|Ga0098035_1145709Not Available807Open in IMG/M
3300006738|Ga0098035_1153742Not Available781Open in IMG/M
3300006738|Ga0098035_1249932Not Available584Open in IMG/M
3300006750|Ga0098058_1033996Not Available1472Open in IMG/M
3300006750|Ga0098058_1168039Not Available576Open in IMG/M
3300006751|Ga0098040_1139815Not Available718Open in IMG/M
3300006753|Ga0098039_1201068Not Available675Open in IMG/M
3300006754|Ga0098044_1066938Not Available1506Open in IMG/M
3300006900|Ga0066376_10194215Not Available1220Open in IMG/M
3300006902|Ga0066372_10608936Not Available651Open in IMG/M
3300006902|Ga0066372_10851057Not Available555Open in IMG/M
3300006902|Ga0066372_11019526Not Available504Open in IMG/M
3300006925|Ga0098050_1162799Not Available560Open in IMG/M
3300006926|Ga0098057_1074717Not Available826Open in IMG/M
3300006926|Ga0098057_1136157All Organisms → cellular organisms → Archaea599Open in IMG/M
3300006927|Ga0098034_1151646Not Available654Open in IMG/M
3300008050|Ga0098052_1115231All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300008050|Ga0098052_1319948Not Available584Open in IMG/M
3300009418|Ga0114908_1213644All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon595Open in IMG/M
3300009420|Ga0114994_10358806All Organisms → cellular organisms → Archaea967Open in IMG/M
3300010151|Ga0098061_1061229Not Available1449Open in IMG/M
3300010151|Ga0098061_1155538Not Available826Open in IMG/M
3300010151|Ga0098061_1202665Not Available703Open in IMG/M
3300010151|Ga0098061_1328199All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.523Open in IMG/M
3300017702|Ga0181374_1085590Not Available524Open in IMG/M
3300017703|Ga0181367_1006824Not Available2119Open in IMG/M
3300017703|Ga0181367_1017363All Organisms → Viruses1314Open in IMG/M
3300017703|Ga0181367_1020233Not Available1210Open in IMG/M
3300017704|Ga0181371_1074178Not Available551Open in IMG/M
3300017704|Ga0181371_1083118Not Available519Open in IMG/M
3300017704|Ga0181371_1086208Not Available508Open in IMG/M
3300017705|Ga0181372_1016175All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1292Open in IMG/M
3300017718|Ga0181375_1021135Not Available1114Open in IMG/M
3300017718|Ga0181375_1075366All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon549Open in IMG/M
3300017775|Ga0181432_1039751Not Available1290Open in IMG/M
3300017775|Ga0181432_1050774All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium1161Open in IMG/M
3300017775|Ga0181432_1104273All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon847Open in IMG/M
3300018049|Ga0181572_10951112Not Available505Open in IMG/M
3300021185|Ga0206682_10436021Not Available549Open in IMG/M
3300021342|Ga0206691_1507727Not Available583Open in IMG/M
3300021979|Ga0232641_1308869Not Available600Open in IMG/M
3300022225|Ga0187833_10086806Not Available2039Open in IMG/M
3300022227|Ga0187827_10112612Not Available1987Open in IMG/M
3300022227|Ga0187827_10219353All Organisms → Viruses1277Open in IMG/M
(restricted) 3300022912|Ga0233430_1100044Not Available1299Open in IMG/M
(restricted) 3300024257|Ga0233442_1188906All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon525Open in IMG/M
3300025072|Ga0208920_1060273Not Available744Open in IMG/M
3300025078|Ga0208668_1003712Not Available3711Open in IMG/M
3300025078|Ga0208668_1009442All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2158Open in IMG/M
3300025082|Ga0208156_1006803All Organisms → Viruses2946Open in IMG/M
3300025096|Ga0208011_1020935Not Available1684Open in IMG/M
3300025096|Ga0208011_1116182Not Available556Open in IMG/M
3300025103|Ga0208013_1045271Not Available1211Open in IMG/M
3300025109|Ga0208553_1140992Not Available533Open in IMG/M
3300025112|Ga0209349_1141620Not Available653Open in IMG/M
3300025114|Ga0208433_1041387All Organisms → Viruses1248Open in IMG/M
3300025114|Ga0208433_1092024Not Available760Open in IMG/M
3300025114|Ga0208433_1146738Not Available557Open in IMG/M
3300025118|Ga0208790_1042226Not Available1461Open in IMG/M
3300025118|Ga0208790_1208590Not Available510Open in IMG/M
3300025118|Ga0208790_1208703Not Available510Open in IMG/M
3300025122|Ga0209434_1161891All Organisms → cellular organisms → Archaea602Open in IMG/M
3300025131|Ga0209128_1131125All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon771Open in IMG/M
3300025138|Ga0209634_1252044Not Available638Open in IMG/M
3300025141|Ga0209756_1083459Not Available1425Open in IMG/M
3300025168|Ga0209337_1232920All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon720Open in IMG/M
3300025545|Ga0209142_1035256Not Available1426Open in IMG/M
3300025596|Ga0209662_1154846All Organisms → Viruses → environmental samples → uncultured Mediterranean phage513Open in IMG/M
3300025623|Ga0209041_1143148Not Available602Open in IMG/M
3300025659|Ga0209249_1110026All Organisms → Viruses → environmental samples → uncultured Mediterranean phage806Open in IMG/M
3300025707|Ga0209667_1125001All Organisms → Viruses → environmental samples → uncultured Mediterranean phage788Open in IMG/M
3300026182|Ga0208275_1108574Not Available523Open in IMG/M
3300026188|Ga0208274_1072342All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium845Open in IMG/M
3300026211|Ga0208132_1141333All Organisms → cellular organisms → Archaea523Open in IMG/M
3300026263|Ga0207992_1030042Not Available1661Open in IMG/M
3300026267|Ga0208278_1036331All Organisms → Viruses1253Open in IMG/M
3300026268|Ga0208641_1116025Not Available749Open in IMG/M
3300027779|Ga0209709_10325605Not Available642Open in IMG/M
3300027801|Ga0209091_10387684Not Available636Open in IMG/M
3300027838|Ga0209089_10389011Not Available775Open in IMG/M
3300027838|Ga0209089_10739633All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon500Open in IMG/M
3300028018|Ga0256381_1011087All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1465Open in IMG/M
3300028173|Ga0257118_1002352Not Available9227Open in IMG/M
3300028173|Ga0257118_1114589All Organisms → Viruses → environmental samples → uncultured Mediterranean phage584Open in IMG/M
3300028189|Ga0257127_1112742All Organisms → Viruses → environmental samples → uncultured virus783Open in IMG/M
3300028190|Ga0257108_1203173Not Available561Open in IMG/M
3300028192|Ga0257107_1116664All Organisms → cellular organisms → Archaea791Open in IMG/M
3300028192|Ga0257107_1235540Not Available513Open in IMG/M
3300029318|Ga0185543_1109212Not Available525Open in IMG/M
3300029448|Ga0183755_1065506All Organisms → cellular organisms → Archaea837Open in IMG/M
3300031800|Ga0310122_10381265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria605Open in IMG/M
3300031803|Ga0310120_10293865Not Available859Open in IMG/M
3300032047|Ga0315330_10106247All Organisms → cellular organisms → Archaea1855Open in IMG/M
3300032820|Ga0310342_101859433Not Available719Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine63.79%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine6.03%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine4.31%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine4.31%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.45%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine2.59%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.59%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.59%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.72%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.72%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.72%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.86%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.86%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.86%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.86%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000142Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500mEnvironmentalOpen in IMG/M
3300001740Marine viral communities from the Deep Pacific Ocean - MSP-114EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300003590Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_200m_DNAEnvironmentalOpen in IMG/M
3300004111Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_200m_DNAEnvironmentalOpen in IMG/M
3300004280Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100mEnvironmentalOpen in IMG/M
3300005425Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199EnvironmentalOpen in IMG/M
3300005508Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259EnvironmentalOpen in IMG/M
3300005520Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005595Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47BEnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006090Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124EnvironmentalOpen in IMG/M
3300006313Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770mEnvironmentalOpen in IMG/M
3300006326Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006347Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021342Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021979Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS926 _150kmerEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022912 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_150_MGEnvironmentalOpen in IMG/M
3300024257 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_150_MGEnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025545Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025596Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025623Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025659Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_200m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025707Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026182Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B (SPAdes)EnvironmentalOpen in IMG/M
3300026188Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)EnvironmentalOpen in IMG/M
3300026211Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)EnvironmentalOpen in IMG/M
3300026263Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)EnvironmentalOpen in IMG/M
3300026267Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)EnvironmentalOpen in IMG/M
3300026268Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028173Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_150mEnvironmentalOpen in IMG/M
3300028189Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135mEnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028192Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500mEnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031800Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LPaug09P16500mDRAFT_106433623300000142MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLISLHNLLGDMNAL
JGI24656J20076_102055513300001740Deep OceanMIKLKDILTEKKELGGAYINKIEQLTDVNAHNEARLELAK
JGI25129J35166_101411363300002484MarineMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSM
JGI25130J35507_101286453300002519MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLG
JGI26251J51716_102154033300003590MarineMIKLKDILIEKKELGGALINKIERLTDINNHNEARLELAKQMKLTN
Ga0008651_1020721423300004111MarineMIKLKDILTEKKELGGAIINQIDRATDSNNHNEARRILAKAI
Ga0066606_1013789113300004280MarineMIKLKDILIEKKELGGALINKIERLTDINNHNEARLELAKQMKLNNLV
Ga0066859_1021346933300005425MarineMIKLKNILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKS
Ga0066868_1003952343300005508MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGY
Ga0066864_1004828213300005520MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPL
Ga0066862_1010068143300005521MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAK
Ga0066833_1002288413300005595MarineMIKLKNILTEKKELGGAMINVIDRLTDSNNHNEARL
Ga0066850_1008020413300005605MarineMIKLKHIISEKKELGGALINKIDDLTDKNAHNMARLTLAKAMRNKILMKNYE
Ga0066850_1017618013300005605MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLA
Ga0082015_107736623300006090MarineMIKLKEILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSMLGKNSPL
Ga0068472_1016531033300006313MarineMIKLSGLITEKKELGGALINKIERLTDRNNHNEARRVLALAMKGGDTKRY
Ga0068477_125585533300006326MarineMIKLSGLITEKKELGGALINKIERFTDRNYHTEARMELAKAV
Ga0068482_111123443300006338MarineMIKLSGLITEKKELGGALINKIERLTDRNNHNEARRVLA
Ga0068481_126085513300006339MarineMGKLGNKMIKLKHILTEKKELGGALINKIERLTDRNNHNM
Ga0068503_1081784213300006340MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSFLGKNSPLVKG
Ga0099697_118032833300006347MarineMIKLSGLITEKKELGGALINKIERMTDINAHTEARMTLAKEVDK
Ga0098033_120258623300006736MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYESLI
Ga0098035_114570913300006738MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLISLQNLLGDMNTLMK
Ga0098035_115374213300006738MarineMIKLKHILTEKKELGGAMINKIDNLTDRNAHNMARLTLAK
Ga0098035_124993213300006738MarineMIKLKDILTEKKELGGAYINKIEQLTDVNAHNEARLELAKQMKLKK
Ga0098058_103399613300006750MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVK
Ga0098058_116803913300006750MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKG
Ga0098040_113981513300006751MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQL
Ga0098039_120106813300006753MarineMIKLKDILTEKKELGGAYINKIEQLTDVNAHNEARLELAKQMKLKNLIK
Ga0098044_106693853300006754MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLISL
Ga0066376_1019421513300006900MarineMIKLKELLTEKTELGGAIINKIDNLTDRNNHNEAR
Ga0066372_1060893633300006902MarineMIKLKHIISEKKELGGALINKIDDLTDKNAHNMARLTLAKAMRNK
Ga0066372_1085105733300006902MarineMIKLAGILTEKKELGGAIINTIDRLTDSNNHNEARLVLAKSFLGKN
Ga0066372_1101952623300006902MarineMIKLKHILTEKKELGGALINKIDNLTDRNAHNMARLTLAKAMKNK
Ga0098050_116279913300006925MarineVIKLKKLITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFL
Ga0098057_107471743300006926MarineMEEMIKLSGLITEKKELGGALINKIERMTDINAHT
Ga0098057_113615733300006926MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYE
Ga0098034_115164613300006927MarineMIKLKNILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSF
Ga0098052_111523153300008050MarineVIKLKKLITEKKELGGAMINTIDRLTDSNNHNEARL
Ga0098052_131994823300008050MarineMIKLKKLITEKKELGGAYIDQIYDLTDRNNHTRARAELARH
Ga0114908_121364413300009418Deep OceanMIKLKQILTEKKELGGALINTIDRLTDSNNHNEARLVLAKSFLGKNSPLVSSYEALITLHNQLG
Ga0114994_1035880613300009420MarineMIKLKDILNEKKELGGAIINKIDRLTDRNNHTMARMELAKV
Ga0098061_106122953300010151MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAK
Ga0098061_115553843300010151MarineMEEMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLISL
Ga0098061_120266533300010151MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSML
Ga0098061_132819923300010151MarineMIKLKHILTEKKEFQGALIKKISMATNRNNHNEARRLLAVAMG
Ga0181374_108559013300017702MarineMIKLKDILTEKKELGGAVINVIDRLTDSNNHNEARLQLAKS
Ga0181367_100682413300017703MarineMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYESLIA
Ga0181367_101736343300017703MarineMIKLKDILTEKKELGGAVINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYESLIA
Ga0181367_102023313300017703MarineVAVVIKLKDILTEKKELGGAMINVIDRLTDSNNHNEAR
Ga0181371_107417833300017704MarineMIKLKELIVEKKELGGAMINTIDRLTDSNNHNEARLQL
Ga0181371_108311823300017704MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNS
Ga0181371_108620813300017704MarineMIKLKELITEKKELGGAMINVIDRLTDSNNHNEARLQLAKS
Ga0181372_101617513300017705MarineMIKLKHILTEKKQLGGSMIYQIDKATDRNNHNEARR
Ga0181375_102113543300017718MarineMIKLKDILTEKKELGGAYINKIEQLTDVNAHNEAR
Ga0181375_107536613300017718MarineVIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLG
Ga0181432_103975113300017775SeawaterMIKLVGIISEKKELGGAMINVIDRLTDSNNHNEARLQLAKSF
Ga0181432_105077413300017775SeawaterMIKLSGLITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLIALH
Ga0181432_110427343300017775SeawaterMIKLKHILTEKKELGGALINKIERLTDRNNHNMSRRVLAMAMGNKK
Ga0181572_1095111233300018049Salt MarshMIKLKTLLTEKKELGSAYIEKIRMLTQRNNHNEARLELAKQMKLK
Ga0206682_1043602113300021185SeawaterMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLISLHNLL
Ga0206691_150772723300021342SeawaterMIKLKEILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSFLGKKSQLVKGYESLIA
Ga0232641_130886933300021979Hydrothermal Vent FluidsMIKFSGLITEKKELGGAYINQIERLTDSNNHNEARLQLAKSFLGKNSPLVSSYEALITLHSKLGDMNTLMK
Ga0187833_1008680663300022225SeawaterMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKN
Ga0187827_1011261253300022227SeawaterMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYES
Ga0187827_1021935313300022227SeawaterMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSP
(restricted) Ga0233430_110004413300022912SeawaterMIKLKDILIEKKELGGALINKIERLTDINNHNEARLELAKQMKLT
(restricted) Ga0233442_118890613300024257SeawaterMIKLKEILTEKKELGGAMINIIDRLTDSNNHNEARLQL
Ga0208920_106027323300025072MarineMIKLKEILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSMLGKNSPLVQSYEALIVLHNQMRE
Ga0208668_100371213300025078MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYES
Ga0208668_100944263300025078MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYESL
Ga0208156_100680313300025082MarineMIKLKDILTEKKELGGAVINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKG
Ga0208011_102093513300025096MarineMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSP
Ga0208011_111618213300025096MarineMIKLAGLVTEKKELGGAIINTIDRLTDSNNHNEARLVLAKSFLGKNSP
Ga0208013_104527153300025103MarineMIKLKELITEKKELGGAYIDQIYNLTDRNNHTRARAELARH
Ga0208553_114099223300025109MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVK
Ga0209349_114162023300025112MarineMIKLKNILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSMLGKNSP
Ga0208433_104138713300025114MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEAR
Ga0208433_109202433300025114MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGK
Ga0208433_114673823300025114MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPLVKGYESLIA
Ga0208790_104222653300025118MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKS
Ga0208790_120859023300025118MarineMIKLKKLITEKKELGGAYIDQIYNLTDRNNHTRARADLARHVGD
Ga0208790_120870323300025118MarineMIKLKHILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKNSPL
Ga0209434_116189113300025122MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGK
Ga0209128_113112533300025131MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLELAKQMKLKN
Ga0209634_125204413300025138MarineMIKLKDILTEKKELGGAIINKIDRLTDRNNHTMARMELAKVMGNKK
Ga0209756_108345913300025141MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQLAKSFLGKNSPLVK
Ga0209337_123292013300025168MarineMIKLKDILTEKKELGGAIINKIDRLTDRNNHTMARMELAKVM
Ga0209142_103525653300025545MarineMIKLKDILIEKKELGGALINKIERLTDINNHNEARLELAKQMKLTKSCKSI
Ga0209662_115484613300025596MarineMIKLKEILTEKKELGGALINKIERLTDVNNHTEARIILAKEV
Ga0209041_114314813300025623MarineMLKLKEILTEKKELGGALINKIEQLTDRNAHTEARMT
Ga0209249_111002623300025659MarineMIKLKDILTEKKELGGAIINQIDRATDSNNHNEARRILAKAIGNKKL
Ga0209667_112500113300025707MarineMIKLKDILTEKKELGGAIINQIDRATDSNNHNEARRILA
Ga0208275_110857423300026182MarineMIKLSGLVTEKKELGGAYINQIERLTDRNNHTRARAELARHIGD
Ga0208274_107234233300026188MarineMIKLKHILTEKKELGGAMIEKIRLLTDRNNHNEARLTLAKEMKAKNLIKAYEA
Ga0208132_114133313300026211MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSFLG
Ga0207992_103004253300026263MarineMIKLKELITEKKELGGAMINTIDRLTDSNNHNEARLQ
Ga0208278_103633113300026267MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSMLGKN
Ga0208641_111602533300026268MarineMIKLRNILTEKKELGGAMINVIDRLTDSNNHNEARLQ
Ga0209709_1032560533300027779MarineMIKLKDILNEKKELGGAIINKIDRLTDRNNHTMARMELAKVM
Ga0209091_1038768433300027801MarineMIKLKDILNEKKELGGAIINKIDRLTDRNNHTMARMELAK
Ga0209089_1038901123300027838MarineMIKLKDILTEKKELGGALINKIERLTDINNHNEARLELAKQMNLKNLV
Ga0209089_1073963313300027838MarineMIKLKEILTEKKELGGAMINTIDRLTDSNNHNEARLQLAKSF
Ga0256381_101108733300028018SeawaterMIKLKQILTEKKELGGALINKIEQLTDRNHHTEARLV
Ga0257118_100235213300028173MarineMIKLKNILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSML
Ga0257118_111458913300028173MarineMIKLKDILTEKKELGGAIINQIDRATDSNNHNEAR
Ga0257127_111274233300028189MarineMIKLKNILTEKKELGGAMINIIDRLTDSNNHNEARLQLAKSMLGKNSPLV
Ga0257108_120317313300028190MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLA
Ga0257107_111666413300028192MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESL
Ga0257107_123554013300028192MarineMIKLKDILTEKKELGGAMINVIDRLTDSNNHNEARLQLAKS
Ga0185543_110921213300029318MarineMIKLKTLLTEKKELGSAYIEKIRMLTQRNNHNEARLELAKQMKLKNL
Ga0183755_106550633300029448MarineMIKLKTILTEKKELGGAMIDKIYNLTDRNAHNMARETLAKA
Ga0310122_1038126513300031800MarineMIKLKELLTEKKELGGALINKIEQLTDRNAHSEARMTLAKEVDKNLLKA
Ga0310120_1029386513300031803MarineMEEMIKLSGLITEKKELGGALINKIERMTDINAHTEAR
Ga0315330_1010624713300032047SeawaterMIKLKDILTEKKELGGAIINKIDRLTDRNNHTMARMELAKVMGNKKLEKI
Ga0310342_10185943333300032820SeawaterMIKLVGIISEKKELGGAMINVIDRLTDSNNHNEARLQLAKSFLGKNSPLVKGYESLIA


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